Error when running "make" to build firmware

[GoldbergLab]

I'm running into a error in the middle of running the final "make" step of building the firmware. Here's the output of make:

[  0%] Creating directories for 'pioasmBuild'
[  0%] No download step for 'pioasmBuild'
[  0%] No update step for 'pioasmBuild'
[  0%] No patch step for 'pioasmBuild'
[  0%] Performing configure step for 'pioasmBuild'
Not searching for unused variables given on the command line.
loading initial cache file /mnt/d/HARP_Firmware/harp.device.lickety-split/firmware/build/pico-sdk/src/rp2_common/pico_cyw43_driver/pioasm/tmp/pioasmBuild-cache-Release.cmake
-- The CXX compiler identification is GNU 9.4.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring done (1.2s)
-- Generating done (0.2s)
-- Build files have been written to: /mnt/d/HARP_Firmware/harp.device.lickety-split/firmware/build/pioasm
[  0%] Performing build step for 'pioasmBuild'
[100%] Built target pioasm
[  1%] Performing install step for 'pioasmBuild'
[100%] Built target pioasm
Install the project...
-- Install configuration: "Release"
[  1%] Completed 'pioasmBuild'
[  1%] Built target pioasmBuild
[  1%] Generating pio_ads7049.pio.h
[  1%] Built target pio_ads7049_pio_ads7049_pio_h
[  1%] Building ASM object pico-sdk/src/rp2040/boot_stage2/CMakeFiles/bs2_default.dir/compile_time_choice.S.o
[  1%] Linking ASM executable bs2_default.elf
[  1%] Built target bs2_default
[  1%] Generating bs2_default.bin
[  1%] Generating bs2_default_padded_checksummed.S
[  1%] Building ASM object pico-sdk/src/rp2040/boot_stage2/CMakeFiles/bs2_default_library.dir/bs2_default_padded_checksummed.S.o
[  1%] Built target bs2_default_library
[  1%] Building CXX object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/src/pio_ads7049.cpp.o
[  1%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_pio/pio.c.o
[  1%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2040/pico_platform/platform.c.o
[  1%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_platform_panic/panic.c.o
[  2%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/hardware_claim/claim.c.o
[  2%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_sync/sync.c.o
[  2%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_sync_spin_lock/sync_spin_lock.c.o
[  2%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_gpio/gpio.c.o
[  2%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_irq/irq.c.o
[  2%] Building ASM object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_irq/irq_handler_chain.S.o
[  3%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_sync/sem.c.o
[  3%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_sync/lock_core.c.o
[  3%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_sync/mutex.c.o
[  3%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_sync/critical_section.c.o
[  3%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_time/time.c.o
[  3%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_time/timeout_helper.c.o
[  4%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_timer/timer.c.o
[  4%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_util/datetime.c.o
[  4%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_util/pheap.c.o
[  4%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_util/queue.c.o
[  4%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_dma/dma.c.o
[  4%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_stdlib/stdlib.c.o
[  5%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_uart/uart.c.o
[  5%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_clocks/clocks.c.o
[  5%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_pll/pll.c.o
[  5%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_vreg/vreg.c.o
[  5%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_watchdog/watchdog.c.o
[  5%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_ticks/ticks.c.o
[  5%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_bootrom/bootrom.c.o
[  6%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_bootrom/bootrom_lock.c.o
[  6%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_boot_lock/boot_lock.c.o
[  6%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_flash/flash.c.o
[  6%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_xosc/xosc.c.o
[  6%] Building ASM object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_divider/divider.S.o
[  6%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_runtime/runtime.c.o
[  7%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_runtime_init/runtime_init.c.o
[  7%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_runtime_init/runtime_init_clocks.c.o
[  7%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_runtime_init/runtime_init_stack_guard.c.o
[  7%] Building ASM object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_bit_ops/bit_ops_aeabi.S.o
[  7%] Building ASM object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_divider/divider_hardware.S.o
[  7%] Building ASM object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_double/double_aeabi_rp2040.S.o
[  8%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_double/double_init_rom_rp2040.c.o
[  8%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_double/double_math.c.o
[  8%] Building ASM object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_double/double_v1_rom_shim_rp2040.S.o
[  8%] Building ASM object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_int64_ops/pico_int64_ops_aeabi.S.o
[  8%] Building ASM object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_float/float_aeabi_rp2040.S.o
[  8%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_float/float_init_rom_rp2040.c.o
[  9%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_float/float_math.c.o
[  9%] Building ASM object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_float/float_v1_rom_shim_rp2040.S.o
[  9%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_malloc/malloc.c.o
[  9%] Building ASM object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_mem_ops/mem_ops_aeabi.S.o
[  9%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_atomic/atomic.c.o
[  9%] Building CXX object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_cxx_options/new_delete.cpp.o
[ 10%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_standard_binary_info/standard_binary_info.c.o
[ 10%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_printf/printf.c.o
[ 10%] Building ASM object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_crt0/crt0.S.o
[ 10%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_clib_interface/newlib_interface.c.o
[ 10%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_stdio/stdio.c.o
[ 10%] Building C object lib/rp2040.pio-ads7049/CMakeFiles/pio_ads7049.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_stdio_uart/stdio_uart.c.o
[ 11%] Linking CXX static library libpio_ads7049.a
[ 11%] Built target pio_ads7049
[ 11%] Building CXX object CMakeFiles/lick_detector.dir/src/lick_detector.cpp.o
[ 11%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_dma/dma.c.o
[ 12%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2040/pico_platform/platform.c.o
[ 12%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_platform_panic/panic.c.o
[ 12%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/hardware_claim/claim.c.o
[ 12%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_sync/sync.c.o
[ 12%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_sync_spin_lock/sync_spin_lock.c.o
[ 12%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_stdlib/stdlib.c.o
[ 12%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_gpio/gpio.c.o
[ 13%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_irq/irq.c.o
[ 13%] Building ASM object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_irq/irq_handler_chain.S.o
[ 13%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_sync/sem.c.o
[ 13%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_sync/lock_core.c.o
[ 13%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_sync/mutex.c.o
[ 13%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_sync/critical_section.c.o
[ 14%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_time/time.c.o
[ 14%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_time/timeout_helper.c.o
[ 14%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_timer/timer.c.o
[ 14%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_util/datetime.c.o
[ 14%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_util/pheap.c.o
[ 14%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/common/pico_util/queue.c.o
[ 15%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_uart/uart.c.o
[ 15%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_clocks/clocks.c.o
[ 15%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_pll/pll.c.o
[ 15%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_vreg/vreg.c.o
[ 15%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_watchdog/watchdog.c.o
[ 15%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_ticks/ticks.c.o
[ 16%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_bootrom/bootrom.c.o
[ 16%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_bootrom/bootrom_lock.c.o
[ 16%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_boot_lock/boot_lock.c.o
[ 16%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_flash/flash.c.o
[ 16%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_xosc/xosc.c.o
[ 16%] Building ASM object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/hardware_divider/divider.S.o
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[ 18%] Building ASM object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_int64_ops/pico_int64_ops_aeabi.S.o
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[ 20%] Building ASM object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_crt0/crt0.S.o
[ 20%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_clib_interface/newlib_interface.c.o
[ 20%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_stdio/stdio.c.o
[ 20%] Building C object CMakeFiles/lick_detector.dir/mnt/d/HARP_Firmware/pico-sdk/src/rp2_common/pico_stdio_uart/stdio_uart.c.o
[ 21%] Linking CXX static library liblick_detector.a
[ 21%] Built target lick_detector
[ 21%] Building CXX object CMakeFiles/core1_lick_detection.dir/src/core1_lick_detection.cpp.o
/mnt/d/HARP_Firmware/harp.device.lickety-split/firmware/src/core1_lick_detection.cpp: In function 'void flag_update()':
/mnt/d/HARP_Firmware/harp.device.lickety-split/firmware/src/core1_lick_detection.cpp:33:15: error: 'class PIO_ADS7049' has no member named 'clear_interrupt'
   33 |     ads7049_0.clear_interrupt();
      |               ^~~~~~~~~~~~~~~
make[2]: *** [CMakeFiles/core1_lick_detection.dir/build.make:79: CMakeFiles/core1_lick_detection.dir/src/core1_lick_detection.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:2371: CMakeFiles/core1_lick_detection.dir/all] Error 2
make: *** [Makefile:91: all] Error 2

I'm pretty stumped as to why this might be happening or what to do about it. I'm building the firmware on Ubuntu 20.04.5 LTS running as WSL in Windows 10

[GoldbergLab]

Ok, update - for some reason, it looks like the git submodules that this repo depends on were not on the latest commit on my computer, even though I just cloned them all fresh. The latest commit for rp2040.pio-ads7049 added the clear_interrupt function to the PIO_ADS7049 class, so I'm thinking that was probably the problem, though I don't understand why I didn't end up with the latest commit when I cloned the repo with submodules.

I have now pulled the latest commits for the submodules, and will update after I attempt to run make again.

[GoldbergLab]

Ok, apparently I'm going to be documenting myself learning how git submodules work in real time. make did get past that previous error this time, but ran into another similar error later on in the process.

I now understand that this repo refers to a particular commit for its submodule repos, and forcing the submodules to the latest commit is probably not be desirable. Will update as I figure this out further.

[GoldbergLab]

Ok, I think there's an actual bug to report:

harp.device.lickety-split @ 62e7257 refers to submodule rp2040.pio-ads7049 @ 56bdb0a, however core1_lick_detection.cpp:33 calls the function PIO_ADS7049.clear_interrupt, which does not exist in rp2040.pio-ads7049 @ 56bdb0a, but does exist in the next commit, rp2040.pio-ads7049 @ 7905406.

That's why updating the submodules to their latest commit got me past the first error. However, then I ran into another problem:

harp.device.lickety-split @ 62e7257 also refers to submodule harp.core.rp2040 @ 0713ac7 (which seems to have been renamed to harp.core.pico) In that repo, harp_c_app.h:51 has a function HarpCApp::init which takes 16 arguments, but the function harp.device.lickety-split/firmware/src/main.cpp:135 calls init with 17 arguments, which causes an error when makeing. The 17th argument (set_visual_indicators_fn) was removed from the function trace in commit harp.core.rp2040 @ 2b0ff2f. So perhaps reverting that submodule to the previous commit, harp.core.rp2040 @ 40c5e06 will fix it - I'm going to try that.