DESCRIPTION

Package: RJMCMC
Version: 0.99.0
Date: 2015-05-01
Title: Bayesian hierarchical model for genome-wide profiling of nucleosome
    positions based on high-throughput short-read data (MNase-Seq data)
Description: This package does nucleosome positioning using informative
    Multinomial-Dirichlet prior in a t-mixture with reversible jump
    estimation of nucleosome positions for genome-wide profiling.
Author: Rawane Samb, Khader Khadraoui, Pascal Belleau, Astrid Deschenes,
    Lajmi Lakhal-Chaieb and Arnaud Droit
Author@R: c(person("Rawane", "Samb",
    email="rawane.samb.1@ulaval.ca", role=c("cre", "aut")),
    role=c("cre","aut")),
    person("Khader", "Khadraoui",
    email="Khader.Khadraoui@mat.ulaval.ca", role=c("aut")),
    person("Pascal", "Belleau",
    email="pascal.belleau@crchuq.ulaval.ca", role=c("aut")),
    person("Astrid", "Deschênes",
    email="Astrid-Louise.Deschenes@crchudequebec.ulaval.ca",
    person("Lajmi", "Lakhal-Chaieb",
    email="Lajmi.Lakhal@mat.ulaval.ca;", role=c("aut")),
    person("Arnaud", "Droit",
    email="arnaud.droit@crchuq.ulaval.ca", role=c("aut")))
Depends:
    R (>= 3.1),
    BiocGenerics,
    IRanges,
    GenomicRanges
Imports:
    MCMCpack,
    consensusSeekeR,
    GenomeInfoDb,
    S4Vectors,
    stats,
    methods
Suggests:
    BiocStyle,
    knitr,
    rmarkdown,
    PING,
    nucleoSim,
    RUnit
Encoding: UTF-8
License: Artistic-2.0
VignetteBuilder: knitr
NeedsCompilation: no
biocViews: BiologicalQuestion, ChIPSeq, NucleosomePositioning,
    Software, StatisticalMethod, Bayesian
Maintainer: Astrid Deschenes <Astrid-Louise.Deschenes@crchudequebec.ulaval.ca>
RoxygenNote: 6.0.1