-
Notifications
You must be signed in to change notification settings - Fork 2
/
INSTALL.txt
91 lines (60 loc) · 3.25 KB
/
INSTALL.txt
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
RRSelection: A new simple and efficient software to detect selection region analysis based Variant Call Format
RRSelection: A Llinkage disequilibrium method to detect selection region across population VCF
1) Introduction
-----------------------------------------------------------------------------------------------------------------
#################################################################################################################
This software relies on the zlib library packages [zlib]
----------------------- zlib infomation ----------------------
if Lib [zlib] do not work
you can download form this website and install it
http://www.zlib.net/
2) INSTALL Method1
----------------------------------------------------------------------------------------------------------------
################################################################################################################
Just execute as follows :
git clone https://github.com/BGI-shenzhen/RRSelection.git
chmod 755 configure ; ./configure ;
make;
mv RRSelection bin/ ;
**Note:** If fail to link,try to <b>re-install</b> the libraries [**_zlib_**](https://zlib.net/)
3) INSTALL Method2
----------------------------------------------------------------------------------------------------------------
################################################################################################################
A) Method2 For linux/Unix
For linux/Unix , execute as follows :
tar -zxvf RRSelectionXXX.tar.gz
cd RRSelectionXXX;
cd src;
make ; make clean
../bin/RRSelection
#I had compiled and installed these gz library packages [zlib] on the linux X64 platform
if Link do not work ,try Re-install the gz library and copy them to the library Dir
RRSelectionXX/src/include/zlib
B) Method2 For macOS platform INSTALL
you should must pre-install the library [zlib] and copy them to the corresponding library directory
#step1 :Should must <b>re-install</b> the gz library [zlib]
see [zlib] website
#step2 : # Copy these gz library file into the corresponding library directory
cp libz.a libz.so* RRSelectionXX/src/include/zlib
#step3 :
sh make.sh # or [make && make clean]
C) Other Method
Note if it can't work . follow below B1-B6 or use the static Compiled [RRSelection_static ]
############################################
#autoscan ./
#cp configure.scan configure.ac
# if can't work, follow below 6 commands
B1: aclocal #// src/automake-1.9/aclocal
B2: autoconf #// src/automake-1.9/autoconf
B3: autoheader #// src/automake-1.9/autoheader
B4: automake --add-missing #// src/automake-1.9/automake --add-missing
B5: ./configure
B6: make
#############################################
#swimming in the sky & flying in the sea#
4) Contact
----------------------------------------------------------------------------------------------------------------
################################################################################################################
email: hewm2008@gmail.com / hewm2008@qq.com
join the QQ Group : 125293663
######################swimming in the sky and flying in the sea ########################### ##