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cwl_airflow/utilities/cwl.py

Lines changed: 4 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -602,9 +602,10 @@ def fast_cwl_step_load(workflow, target_id, cwl_args=None, location=None):
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"type": workflow_input["type"]
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}
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# need to copy original inputBinding because it can include loadContents
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# section and loadContents itself if present outside of inputBinding.
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# Also, need to copy both "default" and "secondaryFiles" if present
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# need to copy:
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# original inputBinding because it can include loadContents section
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# loadContents itself if present outside of inputBinding
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# both "default" and "secondaryFiles" if present
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# TODO: Do I need to copy format?
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for key in ["default", "secondaryFiles", "inputBinding", "loadContents"]:
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if key in workflow_input:

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