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module_configuration.py
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module_configuration.py
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# This file is designed to provide a user with the commands required to configure their external module.
# NOTE - this file will not automatically execute any commands, the user must manually copy the commands and run them.
# TODO - add option to export commands to shell script
# Currently export of PYTHONPATH is only functional when run manually or source file.sh.
import os
import optparse
import glob
import time
import pkg_resources as pr
PIP_INSTALLS = []
USER_MODS = []
ADD_TO_CONFIG = []
def install_client_pkg(client_path):
"""
Add client path to list of packages to be pip installed
Parameters
__________
client_path: absolute path to python package
"""
global PIP_INSTALLS
PIP_INSTALLS.append(client_path)
def get_server_modules(cfg):
"""
Get list of modules to add at users request.
Parameters
__________
cfg: ServerModules.cfg path for the module being added.
Returns
_______
List of module names that need to be added to the main .cfg file to be built
"""
mod_list = []
with open(cfg) as f:
for line in f.readlines():
m = line.split("#")[0].strip()
mod_list += [m] if m else []
return mod_list
def get_chpl_files(mod_path):
"""
Get the chapel files that need to be compiled for the provided package
Parameters
__________
mod_path: path to the module being added to the server.
Returns
______
List of .chpl files at mod_path/server
"""
path = mod_path + "/server/*.chpl"
return glob.glob(path)
def configure_server_module(mod_path):
"""
Configure elements that need to be added to the server for the provided module to be built
Parameters
__________
mod_path: Path to the package.
"""
global ADD_TO_CONFIG, USER_MODS
mod_cfg = mod_path + "/server/ServerModules.cfg"
# ak_cfg = ak_loc + "/ServerModules.cfg"
# get all of the modules listed in the .cfg file
mods = get_server_modules(mod_cfg)
for mod in mods:
ADD_TO_CONFIG.append(f" {mod_path}/server/{mod}.chpl")
def validate_pkgs(pkg_list, ak_loc):
"""
Validate that all packages are configured as required and provide errors if not
Parameters
__________
pkg_list: List of full paths to packages
ak_loc: string path to arkouda
Raises
______
RuntimeError: If any configuration is incorrect.
Notes
_____
Validation is run on all packages at once. This prevents partial installations and quickly alerts the user to
any issues.
"""
# Pip is required to install client pkgs, verify if is installed.
installed_pkgs = {pkg.key for pkg in pr.working_set}
if 'pip' not in installed_pkgs:
raise RuntimeError("pip is required for the client installation. Please install pip.")
ak_checked = False
for pkg in pkg_list:
# Verify that the pkg path exists
if not os.path.exists(pkg):
raise RuntimeError(f"Package Not Found. {pkg} does not exist.")
client_path = pkg + "/client"
server_path = pkg + "/server"
# Verify the client package configuration
if not os.path.exists(client_path):
raise RuntimeError(f"Invalid package. Client package not found. {pkg}")
if not os.path.exists(client_path + "/setup.py"):
raise RuntimeError(f"Invalid Package Configuration. Missing setup.py. {pkg}")
# Verify the server module configuration
if os.path.exists(server_path):
# If the arkouda location has not yet been checked, validate it exists.
if not ak_checked:
if ak_loc:
if not os.path.exists(ak_loc):
raise RuntimeError(f"Arkouda Location not provided or invalid. Set using --ak argument."
f" Provided: {ak_loc}")
ak_cfg = ak_loc + "/ServerModules.cfg"
if not os.path.exists(ak_cfg):
raise RuntimeError(f"Could not locate arkouda ServerModules.cfg: {ak_cfg}")
else:
raise RuntimeError(f"Arkouda Location not provided or invalid. Set using --ak argument."
f" Provided: {ak_loc}")
ak_checked = True
# Verify that ServerModules.cfg exists for the module
mod_cfg = server_path + "/ServerModules.cfg"
if not os.path.exists(mod_cfg):
raise RuntimeError(f"Could not locate module ServerModules.cfg: {mod_cfg}")
def create_commands(ak_loc, config_loc):
"""
Creates the commands needed to install the client packages and make the server with the supplied modules.
Parameters
__________
ak_loc: Path to arkouda
config_loc: Path to the directory where temporary .cfg files are stored. Defaults to ~ (users home directory)
Notes
_____
All commands are printed. Execution can be triggered by piping the script execution to bash.
"""
# install clients or Update if already installed
print(f"pip install -U {' '.join(PIP_INSTALLS)}")
# Create modified config file with user modules - .cfg saved to user home directory
ak_cfg = ak_loc + "/ServerModules.cfg"
tmp_cfg = f"{config_loc}/TmpServerModules.cfg.{int(time.time())}"
print(f"cp {ak_cfg} {tmp_cfg}")
ak_srv_user_mods = '"' + " ".join(ADD_TO_CONFIG) + '"' # setup our ARKOUDA_SERVER_USER_MODULES
print(f"ARKOUDA_SERVER_USER_MODULES={ak_srv_user_mods} ARKOUDA_CONFIG_FILE={tmp_cfg} "
f"ARKOUDA_SKIP_CHECK_DEPS=true make -C {ak_loc}")
def run(pkg_list, ak_loc, config_loc):
"""
Main function used for installing packages. Validation, configuration, and printing commands triggered from here.
Parameters
__________
pkg_list: List of paths to packages to be installed/added to the server.
ak_loc: Path to arkouda
config_loc: Path to the directory where the user would like .cfg files stored.
"""
# If only single pkg being installed, convert to list
if isinstance(pkg_list, str):
pkg_list = [pkg_list.rstrip("/")]
# All packages reviewed at once. This prevents partial installs and alerts user to issues sooner.
validate_pkgs(pkg_list, ak_loc)
# Configure the components needed to build install commands
for pkg in pkg_list:
pkg = pkg.rstrip("/") # remove trailing slash
if ak_loc:
ak_loc = ak_loc.rstrip("/") # remove trailing slash
client_path = pkg + "/client"
server_path = pkg + "/server"
install_client_pkg(client_path)
if os.path.exists(server_path):
configure_server_module(pkg)
create_commands(ak_loc, config_loc)
def get_package_list_from_file(path):
"""
Create a list of packages to install from a provided .txt file
Parameters
__________
path: Filepath to the text file (.txt) containing the list of packages to install.
Returns
______
List of filepaths to packages to install.
Notes
_____
.txt file should provide the full filepath to packages to install and be newline (\n) delimited.
"""
# Verify we have a text file
if not path.endswith('.txt'):
raise RuntimeError("Package List must be a newline(\n) delimited text file.")
# read lines of the file and strip whitespace
with open(path, 'r') as f:
pkg_list = [line.rstrip().rstrip("/") for line in f]
# Verify that we are not given an empty list
if not pkg_list:
raise RuntimeError("No packages found to be installed. "
"Please provide a file with a minimum of 1 package location.")
return pkg_list
def get_package_list_from_directory(path):
"""
Build a package list from the directories (assumed to be packages) in the provided directory.
Parameters
__________
path: the full filepath to the directory storing packages to be installed.
Returns
_______
List of filepaths for the packages to be installed
Raises
______
RuntimeError when the provided path does not exist or it is not a directory.
"""
# Verify the provided parent directory exists
if not os.path.exists(path):
raise RuntimeError(f"Specified parent directory does not exist. {path} Not Found.")
if not os.path.isdir(path):
raise RuntimeError(f"Specified parent directory is not a directory. {path} is not a directory.")
pkg_list = [path.rstrip("/") + "/" + x for x in os.listdir(path) if os.path.isdir(os.path.join(path, x)) and
not x.startswith('.') and not x.startswith('__')]
return pkg_list
if __name__ == "__main__":
parser = optparse.OptionParser()
parser.add_option("--from_file", dest="pkg_list_file", action="store_true", default=False,
help="Indicates that your supplied pkg_path will be a file listing the packages to be installed.")
parser.add_option("--from_parent", dest="parent_dir", action="store_true", default=False,
help="Indicates that your supplied pkg_path will be a directory containing all pkgs to be installed.")
parser.add_option("-p", "--pkg_path", dest="pkg",
help="Full Path to external module you would like to configure, REQUIRED")
parser.add_option("-a", "--ak_loc", dest="arkouda",
help="Full Path to Arkouda installation, required when a server module provided.")
parser.add_option("-c", "--config_loc", dest="config_location", default="~",
help="Indicates the directory to save the temporary configuration files to. Defaults to ~/.")
(options, args) = parser.parse_args()
if not options.pkg:
print("--pkg_path/-p is REQUIRED, but was empty.")
elif options.pkg_list_file:
pkg_list = get_package_list_from_file(options.pkg)
run(pkg_list, options.arkouda, options.config_location)
elif options.parent_dir:
pkg_list = get_package_list_from_directory(options.pkg)
run(pkg_list, options.arkouda, options.config_location)
else:
run(options.pkg, options.arkouda, options.config_location)