Getting started with ~~Mamba~~*Miniforge and Python#
+Getting started with Miniforge* and Python#
Mara Lampert, January 26th, 2023
updated by Stefan Hahmann, December 18th, 2023
(*) After the release of Miniforge 23.3.1 in August 2023, Miniforge and Mambaforge are essentially identical. The only difference is the name of the installer and subsequently the default installation path.
Blog Posts
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/marcelo_zoccoler/entry_user_interf3/Readme.html b/marcelo_zoccoler/entry_user_interf3/Readme.html index 6cfe7c4e..64c498f2 100644 --- a/marcelo_zoccoler/entry_user_interf3/Readme.html +++ b/marcelo_zoccoler/entry_user_interf3/Readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/marcelo_zoccoler/entry_user_interf4/Readme.html b/marcelo_zoccoler/entry_user_interf4/Readme.html index 94b59479..d523d4d6 100644 --- a/marcelo_zoccoler/entry_user_interf4/Readme.html +++ b/marcelo_zoccoler/entry_user_interf4/Readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/marcelo_zoccoler/jamovi/jamovi.html b/marcelo_zoccoler/jamovi/jamovi.html index 8e006da1..835760ba 100644 --- a/marcelo_zoccoler/jamovi/jamovi.html +++ b/marcelo_zoccoler/jamovi/jamovi.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/marcelo_zoccoler/mini_sabbatical_rike/Readme.html b/marcelo_zoccoler/mini_sabbatical_rike/Readme.html index 0d03fb93..5d5dd089 100644 --- a/marcelo_zoccoler/mini_sabbatical_rike/Readme.html +++ b/marcelo_zoccoler/mini_sabbatical_rike/Readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/marcelo_zoccoler/omero_scripts/readme.html b/marcelo_zoccoler/omero_scripts/readme.html index 8e1188f2..4ebece5e 100644 --- a/marcelo_zoccoler/omero_scripts/readme.html +++ b/marcelo_zoccoler/omero_scripts/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/marcelo_zoccoler/readme.html b/marcelo_zoccoler/readme.html index 730bdefa..5d37ae6c 100644 --- a/marcelo_zoccoler/readme.html +++ b/marcelo_zoccoler/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/objects.inv b/objects.inv index 74ddb4ba..3dbaca5c 100644 Binary files a/objects.inv and b/objects.inv differ diff --git a/people.html b/people.html index 57afc0d4..a81ee08b 100644 --- a/people.html +++ b/people.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/robert_haase/browsing_idr/browse_idr.html b/robert_haase/browsing_idr/browse_idr.html index 0a68e0d8..26da1ffa 100644 --- a/robert_haase/browsing_idr/browse_idr.html +++ b/robert_haase/browsing_idr/browse_idr.html @@ -157,7 +157,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/robert_haase/browsing_idr/readme.html b/robert_haase/browsing_idr/readme.html index c847397f..800d9529 100644 --- a/robert_haase/browsing_idr/readme.html +++ b/robert_haase/browsing_idr/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/robert_haase/clesperanto_google_colab/readme.html b/robert_haase/clesperanto_google_colab/readme.html index 1bc07628..6df3b9b6 100644 --- a/robert_haase/clesperanto_google_colab/readme.html +++ b/robert_haase/clesperanto_google_colab/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/robert_haase/cupy_cucim/cupy_cucim.html b/robert_haase/cupy_cucim/cupy_cucim.html index 391fe03f..056331d9 100644 --- a/robert_haase/cupy_cucim/cupy_cucim.html +++ b/robert_haase/cupy_cucim/cupy_cucim.html @@ -157,7 +157,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/robert_haase/cupy_cucim/readme.html b/robert_haase/cupy_cucim/readme.html index e8e8864a..ffa470a2 100644 --- a/robert_haase/cupy_cucim/readme.html +++ b/robert_haase/cupy_cucim/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/robert_haase/ms_build_tools/readme.html b/robert_haase/ms_build_tools/readme.html index 2fb4cb0f..8331ab79 100644 --- a/robert_haase/ms_build_tools/readme.html +++ b/robert_haase/ms_build_tools/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/robert_haase/readme.html b/robert_haase/readme.html index 58418b76..dfca24f8 100644 --- a/robert_haase/readme.html +++ b/robert_haase/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/robert_haase/stardist_gpu/readme.html b/robert_haase/stardist_gpu/readme.html index ee42c747..aae762a7 100644 --- a/robert_haase/stardist_gpu/readme.html +++ b/robert_haase/stardist_gpu/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/robert_haase/why_we_blog/readme.html b/robert_haase/why_we_blog/readme.html index 317e735d..1bc618cc 100644 --- a/robert_haase/why_we_blog/readme.html +++ b/robert_haase/why_we_blog/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/ryan_savill/01_intro_to_python/readme.html b/ryan_savill/01_intro_to_python/readme.html index dbdc97ca..f34a99e1 100644 --- a/ryan_savill/01_intro_to_python/readme.html +++ b/ryan_savill/01_intro_to_python/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/ryan_savill/02_intro_to_skimage/Introduction to Image Analysis Basics in Python with Scikit Image.html b/ryan_savill/02_intro_to_skimage/Introduction to Image Analysis Basics in Python with Scikit Image.html index e815205d..d53d2e83 100644 --- a/ryan_savill/02_intro_to_skimage/Introduction to Image Analysis Basics in Python with Scikit Image.html +++ b/ryan_savill/02_intro_to_skimage/Introduction to Image Analysis Basics in Python with Scikit Image.html @@ -157,7 +157,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/ryan_savill/02_intro_to_skimage/readme.html b/ryan_savill/02_intro_to_skimage/readme.html index a57f10ec..4f86c67f 100644 --- a/ryan_savill/02_intro_to_skimage/readme.html +++ b/ryan_savill/02_intro_to_skimage/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/ryan_savill/03_background_subtraction/background subtraction in scipy and scikit image.html b/ryan_savill/03_background_subtraction/background subtraction in scipy and scikit image.html index 8afa472f..81fb4f20 100644 --- a/ryan_savill/03_background_subtraction/background subtraction in scipy and scikit image.html +++ b/ryan_savill/03_background_subtraction/background subtraction in scipy and scikit image.html @@ -157,7 +157,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/ryan_savill/03_background_subtraction/readme.html b/ryan_savill/03_background_subtraction/readme.html index 0cb186a7..87a826d4 100644 --- a/ryan_savill/03_background_subtraction/readme.html +++ b/ryan_savill/03_background_subtraction/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/ryan_savill/principal_feature_analysis/readme.html b/ryan_savill/principal_feature_analysis/readme.html index 5b8bae0c..5703a2ce 100644 --- a/ryan_savill/principal_feature_analysis/readme.html +++ b/ryan_savill/principal_feature_analysis/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/ryan_savill/readme.html b/ryan_savill/readme.html index 412ffe31..1a3846ec 100644 --- a/ryan_savill/readme.html +++ b/ryan_savill/readme.html @@ -159,7 +159,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/search.html b/search.html index 6f80471b..6d837f7d 100644 --- a/search.html +++ b/search.html @@ -158,7 +158,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server diff --git a/searchindex.js b/searchindex.js index 5fdcee8e..f1842b85 100644 --- a/searchindex.js +++ b/searchindex.js @@ -1 +1 @@ -Search.setIndex({"docnames": ["imprint", "intro", "johannes_mueller/Readme", "johannes_mueller/anaconda_getting_started/Readme", "johannes_mueller/entry_sphinx/Readme", "johannes_mueller/entry_user_inter/Readme", "johannes_mueller/entry_user_interf2/Readme", "johannes_mueller/qtdesigner_and_magicgui/Readme", "johannes_mueller/qtdesigner_and_magicgui/example/demo", "mara_lampert/getting_started_with_mambaforge_and_python/readme", "mara_lampert/readme", "marcelo_zoccoler/entry_user_interf3/Readme", "marcelo_zoccoler/entry_user_interf4/Readme", "marcelo_zoccoler/jamovi/jamovi", "marcelo_zoccoler/mini_sabbatical_rike/Readme", "marcelo_zoccoler/omero_scripts/readme", "marcelo_zoccoler/readme", "people", "robert_haase/browsing_idr/browse_idr", "robert_haase/browsing_idr/readme", 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[3, 7, 9, 11, 13, 26, 27, 28, 29, 34], "default": [3, 4, 6, 7, 9, 12, 20, 21, 25, 28, 29, 34, 35], "locat": [3, 4, 6, 7, 9, 12, 19, 20, 34], "ask": [3, 9, 12, 15, 20, 25, 30, 31, 34, 35], "add": [3, 4, 5, 6, 7, 9, 11, 12, 13, 28, 29, 30, 31, 35], "anaconda3": [3, 6, 30], "path": [3, 4, 6, 7, 9, 11, 12, 25, 34], "variabl": [3, 7, 11, 12, 13, 18, 19, 25, 27, 28, 29, 32], "below": [3, 5, 7, 10, 11, 12, 13, 15, 16, 18, 19, 27, 28, 29, 32, 33, 34, 35], "until": [3, 4, 5, 21, 30, 31, 32, 35], "arriv": [3, 9], "box": [3, 6, 7, 12, 13, 35], "what": [3, 4, 5, 7, 9, 11, 14, 20, 26, 27, 28, 29, 30, 31, 32, 33, 34], "anywai": 3, "exit": [3, 9], "great": [3, 5, 6, 7, 9, 11, 12, 27, 28, 29, 32], "although": [3, 4, 11, 12, 14], "graphic": [3, 5, 6, 7, 11, 12, 20, 21, 22, 25, 34, 35], "interfac": [3, 7, 13, 15, 18, 19, 20, 34, 35], "rather": [3, 4, 11, 30, 31, 34], "command": [3, 4, 5, 6, 7, 9, 11, 12, 15, 21, 22, 23, 25, 27, 28, 29, 32, 35], "line": [3, 4, 5, 6, 7, 9, 11, 12, 15, 21, 22, 25, 27, 28, 29, 30, 31, 32, 35], "henc": [3, 4, 7], "stick": [3, 5, 32], "rest": [3, 28, 29], "concept": [3, 5, 14, 30, 31, 32], "open": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 18, 24, 25, 27], "prompt": [3, 5, 6, 9, 12], "simpli": [3, 6, 7, 12, 14], "hit": [3, 9, 11, 12, 20, 23, 25], "button": [3, 5, 6, 7, 9, 11, 12, 13, 15, 20, 25, 27, 34, 35], "type": [3, 5, 6, 7, 9, 11, 12, 13, 15, 18, 19, 20, 32, 35], "cmd": [3, 9, 13, 27], "spawn": [3, 34, 35], "launchpad": 3, "icon": [3, 9], "dock": [3, 12], "termin": [3, 7, 9, 12], "search": [3, 4, 6, 9, 19, 25, 27, 28, 29], "field": [3, 11, 12, 13, 14, 16, 18, 19, 20, 26, 35], "linux": [3, 22, 35], "typic": [3, 4, 7, 12, 18, 19, 23, 35], "applic": [3, 5, 6, 15, 18, 19, 35], "list": [3, 4, 6, 12, 13, 21, 30, 31, 32, 34, 35], "hand": [3, 7, 25], "side": [3, 11, 12, 13, 15, 20, 28, 29], "panel": [3, 9, 15], "activ": [3, 4, 5, 6, 9, 12, 13, 15, 18, 19, 23, 25, 27, 28, 29, 34], "prefix": [3, 9], "base": [3, 4, 5, 6, 9, 11, 12, 19, 22, 24, 28, 29, 32, 33], "ani": [3, 6, 7, 9, 11, 12, 15, 26, 27, 28, 29, 30, 31, 32, 34, 35], "reason": [3, 5, 9, 11, 13, 34, 35], "did": [3, 7, 12, 13, 27], "option": [3, 4, 5, 9, 11, 12, 13, 15, 25, 27, 28, 29, 34, 35], "abov": [3, 4, 5, 6, 7, 11, 15, 18, 19, 27, 28, 29, 30, 31, 32, 34, 35], "select": [3, 4, 6, 7, 11, 12, 13, 15, 19, 20, 32, 34, 35], "similarli": [3, 6, 7, 11, 27, 32], "exist": [3, 4, 13, 25, 34, 35], "platform": [3, 5, 6, 11, 12, 13, 35], "also": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 16, 18, 19, 20, 21, 22, 23, 24, 25, 27, 28, 29, 30, 31, 32], "directli": [3, 4, 5, 6, 7, 28, 29], "continu": [3, 11, 21, 22, 25], "normal": [3, 13, 18, 19, 23, 27, 35], "strongli": [3, 35], "never": [3, 4, 9, 14, 28, 29], "happen": [3, 5, 9, 27, 28, 29, 34], "incompat": [3, 9, 27], "occur": [3, 9], "than": [3, 10, 11, 12, 13, 27, 28, 29, 30, 31, 32, 34, 35], "problem": [3, 4, 9, 27], "delet": [3, 12, 13, 34], "recreat": [3, 9], "over": [3, 19, 24, 27, 28, 29, 30, 31], "howev": [3, 5, 6, 12, 25, 29, 30, 31, 33, 35], 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35], "convieni": 3, "proper": [3, 4, 28, 29], "pyopencl": 3, "c": [3, 4, 6, 9, 11, 12, 13, 18, 19, 23, 25, 27, 28, 30, 32], "forg": [3, 4, 9, 11], "jupyterlab": [3, 11], "again": [3, 4, 6, 9, 11, 12, 14, 23, 25, 27, 28, 29, 30, 31, 34], "behind": [3, 32], "proxi": 3, "server": [3, 34, 35], "g": [3, 4, 5, 6, 7, 11, 12, 18, 19, 20, 21, 22, 23, 25, 35], "within": [3, 4, 15, 22, 34, 35], "network": [3, 35], "hospit": [3, 14], "compani": [3, 35], "set": [3, 4, 5, 6, 7, 11, 14, 18, 19, 21, 25, 26, 28, 29, 30, 31, 32], "file": [3, 4, 7, 11, 13, 15, 18, 19, 20, 25, 27, 30, 31, 34, 35], "condarc": 3, "On": [3, 7, 12, 13, 19, 35], "yourusernam": [3, 27], "editor": [3, 5, 11, 12, 24], "proxy_serv": 3, "nameofproxi": 3, "8080": 3, "local": [3, 15, 19, 21, 25, 26, 34, 35], "IT": [3, 15, 25], "admin": 3, "institut": 3, "jupyer": 3, "conveni": [3, 5, 11, 12, 21, 22], "browser": [3, 6, 9, 12, 15, 19, 23, 35], "were": [3, 11, 12, 13, 16, 18, 19, 21, 22, 25, 28, 29, 35], "abl": [3, 4, 5, 6, 7, 14, 25, 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"time": [2, 3, 4, 5, 7, 11, 12, 14, 18, 19, 20, 21, 22, 23, 28, 29, 32, 34, 35], "wise": [2, 6], "feasibl": [2, 34], "enter": [2, 3, 4, 6, 9, 12, 20, 25, 27, 35], "becam": [2, 10], "part": [2, 7, 10, 14, 18, 19, 25, 27, 28, 29, 30, 31, 32, 34, 35], "pol": [2, 10, 16, 24, 35], "task": [2, 5, 7, 34, 35], "tailor": 2, "workflow": [2, 3, 4, 14, 20, 28, 29, 34, 35], "fellow": 2, "educ": [2, 30, 31], "other": [2, 3, 5, 7, 9, 11, 12, 13, 14, 20, 22, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35], "empow": 2, "them": [2, 3, 6, 7, 9, 11, 12, 13, 15, 18, 19, 25, 28, 29, 30, 31, 32, 35], "own": [2, 3, 6, 9, 12, 15, 25, 28, 29, 34, 35], "new": [2, 4, 5, 6, 7, 11, 12, 13, 14, 15, 19, 21, 25, 26, 27, 28, 29, 34, 35], "method": [2, 5, 6, 11, 12, 18, 19, 27, 28, 29, 30, 31, 32], "thei": [2, 6, 10, 12, 13, 14, 15, 19, 27, 28, 29, 35], "deploi": [2, 35], "mani": [2, 5, 6, 7, 11, 13, 21, 22, 30, 31, 32, 35], "possibl": [2, 6, 11, 13, 14, 21, 22], "gui": [2, 7, 16], "python": [2, 4, 10, 13, 16, 21, 22, 23, 24, 30, 31, 32, 34, 35], "get": [2, 6, 7, 10, 11, 12, 13, 14, 18, 19, 20, 21, 22, 25, 26, 28, 29, 30, 31, 32, 34], "advanc": [2, 5, 16, 33, 34, 35], "qt": [2, 5, 11, 12], "design": [2, 11, 12, 16], "autom": [2, 12, 19, 32], "document": [2, 3, 11, 12, 13, 34, 35], "sphinx": [2, 12], "anaconda": [2, 4, 5, 6, 7, 12, 27, 28, 29, 30, 31], "bia": [2, 10, 16, 24, 26, 35], "websit": [2, 10, 11, 12, 13, 16, 18, 19, 23, 24, 25], "twitter": [2, 10, 16, 24, 33], "note": [3, 4, 6, 7, 9, 11, 12, 18, 19, 22, 23, 25, 34, 35], "instruct": [3, 9, 12, 15, 20, 22, 25, 34, 35], "blog": [3, 4, 5, 6, 7, 9, 11, 12, 19, 20, 22, 23, 27, 29, 30, 31, 33], "post": [3, 4, 7, 9, 11, 12, 19, 20, 22, 23, 27, 28, 29, 30, 31], "outdat": 3, "updat": [3, 6, 9, 10, 11, 19, 33], "cover": [3, 4, 5, 6, 7, 11, 12, 27, 33], "all": [3, 4, 5, 6, 7, 9, 10, 11, 12, 13, 18, 19, 22, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35], "necessari": [3, 6, 9, 12, 23, 25, 32, 35], "step": [3, 6, 9, 11, 12, 13, 15, 25, 27, 28, 29, 30, 31, 32], "download": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 18, 25, 27, 28, 29, 35], "setup": [3, 9, 12, 34, 35], "machin": [3, 24, 35], "guid": [3, 9, 13], "readi": [3, 4, 7, 9, 12, 13], "befor": [3, 4, 6, 7, 11, 12, 13, 15, 21, 22, 25, 27, 30, 31, 32, 34, 35], "do": [3, 4, 5, 6, 7, 9, 11, 12, 13, 14, 21, 22, 23, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35], "need": [3, 4, 6, 7, 9, 11, 12, 15, 18, 19, 20, 21, 22, 23, 25, 26, 28, 29, 30, 31, 32, 35], "first": [3, 4, 5, 6, 9, 10, 12, 14, 18, 19, 20, 27, 28, 29, 30, 31, 32, 34], "place": [3, 6, 7, 11, 15], "bit": [3, 4, 6, 7, 11, 19, 23, 27, 28, 29, 30, 31], "detail": [3, 7, 25, 27, 28, 29, 34], "here": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 19, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 35], "A": [3, 4, 7, 9, 12, 13, 14, 15, 18, 19, 20, 21, 22, 25, 28, 29, 32, 35], "few": [3, 4, 5, 6, 7, 11, 12, 15, 27, 28, 29, 30, 31, 32, 35], "kei": [3, 7, 15, 18, 19, 32], "program": [3, 5, 6, 9, 13, 18, 19, 24, 25, 27, 28, 29, 30, 31, 33, 35], "languag": [3, 4, 9, 13, 14, 30, 31, 35], "simplifi": [3, 11], "collabor": [3, 20, 24, 26], "between": [3, 9, 10, 12, 14, 25, 26, 30, 31, 35], "scientist": [3, 10, 14, 19, 24, 33], "disciplin": 3, "write": [3, 4, 6, 7, 9, 11, 12, 22, 27, 28, 29, 30, 31, 35], "script": [3, 5, 6, 12, 34], "modul": [3, 4, 10, 11, 12, 13], "share": [3, 12, 14, 18, 19, 21, 22, 25, 26, 33, 34, 35], "everybodi": 3, "els": [3, 5, 7, 11, 12, 23, 28, 29, 30, 31], "while": [3, 6, 7, 9, 23, 25, 32, 34], "enabl": [3, 11, 12, 13, 20], "project": [3, 4, 6, 9, 12, 14, 15, 18, 19, 27, 28, 29, 30, 31, 32, 35], "entir": [3, 7], "level": [3, 4, 7, 11, 12, 15], "sometim": [3, 4, 5, 6, 11, 28, 29, 30, 31], "tricki": [3, 7, 23], "right": [3, 6, 7, 8, 11, 12, 13, 15, 19, 23, 25, 32, 34, 35], "version": [3, 9, 11, 20, 21, 25, 27, 35], "make": [3, 5, 6, 7, 9, 11, 12, 18, 19, 20, 21, 22, 25, 27, 28, 29, 30, 31, 34, 35], "run": [3, 5, 6, 7, 9, 12, 13, 21, 22, 25, 27, 28, 29, 34], "each": [3, 7, 11, 12, 27, 28, 29, 30, 31, 32], "ensur": [3, 9, 35], "compat": [3, 9, 21, 22, 27], "allow": [3, 4, 5, 6, 7, 9, 13, 15, 18, 19, 20, 27, 30, 31, 33], "call": [3, 4, 6, 7, 9, 12, 13, 15, 16, 18, 19, 27, 28, 29, 30, 31, 32, 33], "It": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 19, 20, 23, 27, 28, 29, 30, 31, 33, 34, 35], "recommend": [3, 4, 5, 6, 9, 14, 21, 22, 25, 32, 35], "one": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 19, 20, 22, 27, 28, 29, 30, 31, 32, 34, 35], "everi": [3, 4, 5, 6, 7, 9, 10, 11, 13, 20, 27, 28, 29, 32, 33], "text": [3, 4, 6, 15, 28, 30, 32, 35], "public": [3, 4, 12, 18, 19, 26], "much": [3, 4, 7, 13, 27, 28, 29, 30, 31, 32, 33, 34, 35], "easier": [3, 6, 22, 23, 27, 30, 31, 33, 34], "maintain": [3, 9, 11], "relev": [3, 14], "given": [3, 5, 19, 30, 31], "tutori": [3, 4, 6, 7, 9, 11, 12, 13, 15, 20, 22, 27], "done": [3, 4, 5, 6, 7, 11, 12, 13, 15, 16, 28, 29, 32, 34], "window": [3, 5, 6, 7, 8, 11, 12, 15, 18, 19, 24, 27, 35], "should": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 25, 27, 28, 29, 30, 31, 32, 34, 35], "equal": [3, 30, 31, 32], "mac": 3, "os": [3, 4, 5, 6, 35], "order": [3, 4, 5, 6, 7, 11, 12, 18, 19, 20, 21, 22, 25, 28, 29, 35], "go": [3, 4, 5, 6, 7, 9, 11, 12, 13, 18, 19, 20, 22, 23, 25, 27, 28, 29, 34, 35], "http": [3, 4, 9, 11, 12, 15, 18, 19, 20, 21, 22, 23, 26, 35], "www": [3, 18, 19, 35], "com": [3, 4, 9, 12, 18, 19, 23, 35], "product": [3, 26], "individu": [3, 28, 29], "click": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 19, 20, 21, 23, 25, 34, 35], "when": [3, 4, 7, 9, 11, 12, 15, 16, 19, 20, 23, 25, 27, 28, 29, 30, 31, 32, 33], "ha": [3, 4, 5, 6, 7, 11, 12, 15, 16, 20, 23, 27, 28, 29, 30, 31, 32, 35], "follow": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 18, 19, 20, 21, 22, 23, 25, 27, 32, 34, 35], "next": [3, 5, 6, 9, 11, 12, 13, 15, 18, 19, 25, 28, 29, 30, 31], "agre": [3, 9], "now": [3, 4, 5, 6, 7, 9, 10, 11, 12, 13, 15, 16, 27, 28, 29, 30, 31, 32, 33, 34, 35], "choic": [3, 4, 5, 7, 27, 32], "whether": [3, 35], "user": [3, 7, 9, 13, 15, 25, 27, 28, 30, 31, 34], "me": [3, 9, 10, 12, 14, 16, 20, 23, 27, 30, 31, 32], "requir": [3, 7, 9, 12, 21, 23, 35], "administr": [3, 9, 25], "privileg": [3, 25], "caus": 3, "troubl": 3, "same": [3, 5, 6, 7, 11, 12, 15, 27, 28, 29, 30, 31, 32, 34, 35], "too": [3, 7, 9, 11, 13, 26, 27, 28, 29, 34], "default": [3, 4, 6, 7, 9, 12, 20, 21, 25, 28, 29, 34, 35], "locat": [3, 4, 6, 7, 9, 12, 19, 20, 34], "ask": [3, 9, 12, 15, 20, 25, 30, 31, 34, 35], "add": [3, 4, 5, 6, 7, 9, 11, 12, 13, 28, 29, 30, 31, 35], "anaconda3": [3, 6, 30], "path": [3, 4, 6, 7, 9, 11, 12, 25, 34], "variabl": [3, 7, 11, 12, 13, 18, 19, 25, 27, 28, 29, 32], "below": [3, 5, 7, 10, 11, 12, 13, 15, 16, 18, 19, 27, 28, 29, 32, 33, 34, 35], "until": [3, 4, 5, 21, 30, 31, 32, 35], "arriv": [3, 9], "box": [3, 6, 7, 12, 13, 35], "what": [3, 4, 5, 7, 9, 11, 14, 20, 26, 27, 28, 29, 30, 31, 32, 33, 34], "anywai": 3, "exit": [3, 9], "great": [3, 5, 6, 7, 9, 11, 12, 27, 28, 29, 32], "although": [3, 4, 11, 12, 14], "graphic": [3, 5, 6, 7, 11, 12, 20, 21, 22, 25, 34, 35], "interfac": [3, 7, 13, 15, 18, 19, 20, 34, 35], "rather": [3, 4, 11, 30, 31, 34], "command": [3, 4, 5, 6, 7, 9, 11, 12, 15, 21, 22, 23, 25, 27, 28, 29, 32, 35], "line": [3, 4, 5, 6, 7, 9, 11, 12, 15, 21, 22, 25, 27, 28, 29, 30, 31, 32, 35], "henc": [3, 4, 7], "stick": [3, 5, 32], "rest": [3, 28, 29], "concept": [3, 5, 14, 30, 31, 32], "open": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 18, 24, 25, 27], "prompt": [3, 5, 6, 9, 12], "simpli": [3, 6, 7, 12, 14], "hit": [3, 9, 11, 12, 20, 23, 25], "button": [3, 5, 6, 7, 9, 11, 12, 13, 15, 20, 25, 27, 34, 35], "type": [3, 5, 6, 7, 9, 11, 12, 13, 15, 18, 19, 20, 32, 35], "cmd": [3, 9, 13, 27], "spawn": [3, 34, 35], "launchpad": 3, "icon": [3, 9], "dock": [3, 12], "termin": [3, 7, 9, 12], "search": [3, 4, 6, 9, 19, 25, 27, 28, 29], "field": [3, 11, 12, 13, 14, 16, 18, 19, 20, 26, 35], "linux": [3, 22, 35], "typic": [3, 4, 7, 12, 18, 19, 23, 35], "applic": [3, 5, 6, 15, 18, 19, 35], "list": [3, 4, 6, 12, 13, 21, 30, 31, 32, 34, 35], "hand": [3, 7, 25], "side": [3, 11, 12, 13, 15, 20, 28, 29], "panel": [3, 9, 15], "activ": [3, 4, 5, 6, 9, 12, 13, 15, 18, 19, 23, 25, 27, 28, 29, 34], "prefix": [3, 9], "base": [3, 4, 5, 6, 9, 11, 12, 19, 22, 24, 28, 29, 32, 33], "ani": [3, 6, 7, 9, 11, 12, 15, 26, 27, 28, 29, 30, 31, 32, 34, 35], "reason": [3, 5, 9, 11, 13, 34, 35], "did": [3, 7, 12, 13, 27], "option": [3, 4, 5, 9, 11, 12, 13, 15, 25, 27, 28, 29, 34, 35], "abov": [3, 4, 5, 6, 7, 11, 15, 18, 19, 27, 28, 29, 30, 31, 32, 34, 35], "select": [3, 4, 6, 7, 11, 12, 13, 15, 19, 20, 32, 34, 35], "similarli": [3, 6, 7, 11, 27, 32], "exist": [3, 4, 13, 25, 34, 35], "platform": [3, 5, 6, 11, 12, 13, 35], "also": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 16, 18, 19, 20, 21, 22, 23, 24, 25, 27, 28, 29, 30, 31, 32], "directli": [3, 4, 5, 6, 7, 28, 29], "continu": [3, 11, 21, 22, 25], "normal": [3, 13, 18, 19, 23, 27, 35], "strongli": [3, 35], "never": [3, 4, 9, 14, 28, 29], "happen": [3, 5, 9, 27, 28, 29, 34], "incompat": [3, 9, 27], "occur": [3, 9], "than": [3, 10, 11, 12, 13, 27, 28, 29, 30, 31, 32, 34, 35], "problem": [3, 4, 9, 27], "delet": [3, 12, 13, 34], "recreat": [3, 9], "over": [3, 19, 24, 27, 28, 29, 30, 31], "howev": [3, 5, 6, 12, 25, 29, 30, 31, 33, 35], "reinstal": [3, 9, 27], "take": [3, 4, 5, 11, 13, 18, 19, 21, 22, 25, 28, 29, 30, 31, 32, 33, 34, 35], "With": [3, 4, 6, 12, 20, 27, 32], "my_first_env": [3, 9], "3": [3, 5, 6, 9, 12, 13, 15, 18, 19, 21, 22, 25, 27, 28, 29, 30, 31, 32], "9": [3, 6, 9, 21, 27, 32, 35], "basic": [3, 6, 7, 22, 25, 30, 31, 33, 35], "ship": [3, 6], "along": [3, 7, 12, 32], "proce": [3, 4, 5, 9], "y": [3, 4, 5, 6, 9, 12, 18, 19, 21, 32], "n": [3, 4, 5, 6, 9, 12, 20, 27, 35], "confirm": [3, 9, 12], "To": [3, 4, 6, 7, 9, 12, 19, 21, 25, 27, 28, 29, 30, 31, 34, 35], "lead": [3, 4, 9, 11, 12, 23, 35], "appear": [3, 5, 9, 12, 13, 15, 23], "begin": [3, 7, 9, 30, 31], "That": [3, 4, 5, 11, 15], "actual": [3, 4, 5, 7, 14, 27, 28, 29, 35], "process": [3, 5, 6, 7, 9, 11, 12, 24, 25, 26, 28, 29, 30, 31], "still": [3, 5, 7, 11, 13, 14, 28, 29, 30, 31, 32, 34], "programm": [3, 5, 6, 11, 12, 13, 23], "edit": [3, 4, 12, 25], "For": [3, 4, 5, 6, 7, 9, 11, 12, 13, 14, 15, 18, 19, 20, 21, 22, 25, 27, 28, 29, 30, 31, 32, 34, 35], "convieni": 3, "proper": [3, 4, 28, 29], "pyopencl": 3, "c": [3, 4, 6, 9, 11, 12, 13, 18, 19, 23, 25, 27, 28, 30, 32], "forg": [3, 4, 9, 11], "jupyterlab": [3, 11], "again": [3, 4, 6, 9, 11, 12, 14, 23, 25, 27, 28, 29, 30, 31, 34], "behind": [3, 32], "proxi": 3, "server": [3, 34, 35], "g": [3, 4, 5, 6, 7, 11, 12, 18, 19, 20, 21, 22, 23, 25, 35], "within": [3, 4, 15, 22, 34, 35], "network": [3, 35], "hospit": [3, 14], "compani": [3, 35], "set": [3, 4, 5, 6, 7, 11, 14, 18, 19, 21, 25, 26, 28, 29, 30, 31, 32], "file": [3, 4, 7, 11, 13, 15, 18, 19, 20, 25, 27, 30, 31, 34, 35], "condarc": 3, "On": [3, 7, 12, 13, 19, 35], "yourusernam": [3, 27], "editor": [3, 5, 11, 12, 24], "proxy_serv": 3, "nameofproxi": 3, "8080": 3, "local": [3, 15, 19, 21, 25, 26, 34, 35], "IT": [3, 15, 25], "admin": 3, "institut": 3, "jupyer": 3, "conveni": [3, 5, 11, 12, 21, 22], "browser": [3, 6, 9, 12, 15, 19, 23, 35], "were": [3, 11, 12, 13, 16, 18, 19, 21, 22, 25, 28, 29, 35], "abl": [3, 4, 5, 6, 7, 14, 25, 30, 31], "complet": [3, 4, 6, 11, 12, 27, 32], "launch": 3, "consol": [3, 25, 27], "wonder": [3, 4], "exactli": 3, "intent": 3, "notebook": [3, 5, 6, 7, 9, 11, 21, 22, 25, 30, 31], "highlight": [3, 7, 12, 30, 31], "newli": [3, 4, 7, 21], "look": [3, 4, 5, 6, 7, 9, 11, 12, 13, 14, 15, 18, 19, 20, 21, 22, 23, 25, 27, 28, 29, 30, 31, 35], "organ": [3, 12, 15, 18, 19, 27], "cell": [3, 9, 14, 16, 18, 19, 20, 28, 29], "popul": [3, 6], "either": [3, 6, 9, 12, 15, 27, 28, 29, 30, 31, 34], "markdown": [3, 4], "lightweight": 3, "format": [3, 7, 18, 19, 21, 22, 27, 28, 29, 30, 31, 32], "see": [3, 4, 5, 6, 7, 9, 11, 12, 13, 15, 18, 19, 20, 21, 22, 25, 27, 28, 29, 30, 31, 32], "page": [3, 6, 12, 25], "overview": [3, 9, 12, 18, 19, 20, 29, 35], "availablw": 3, "annot": [3, 7, 11, 12, 18, 19], "top": [3, 4, 6, 7, 13, 15, 18, 19, 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- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server @@ -636,7 +636,7 @@
- Best of both worlds: Combining Qt Designer and magicgui -
- Getting started with ~~Mamba~~*Miniforge and Python +
- Getting started with Miniforge* and Python
- Using GPU-accelerated image processing on the TUD HPC cluster
- Setting up GPU-accelerated image processing on the TUD HPC cluster
- Running Deep-Learning Scripts in the BiA-PoL Omero Server
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Acknowledgements
previous
- Getting started with ~~Mamba~~*Miniforge and Python
+ Getting started with Miniforge* and Python
Blog Posts
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-Getting started with ~~Mamba~~*Miniforge and Python
+Getting started with Miniforge* and Python