New pipeline function for code usage | Updates on torch version #64
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…e torch version(tested) | Added test case for BIDS I/O
Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## main #64 +/- ##
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+ Coverage 71.03% 72.42% +1.39%
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Files 3 3
Lines 290 301 +11
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+ Hits 206 218 +12
+ Misses 84 83 -1
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@AlexanderGetka-cbica It's run_ndlmuse_pipeline, i don't see the issue. |
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I updated the torch version for up to 2.3.1 for now. The pipeline is tested and the torch version of the other packages(DLMUSE, DLICV, DLWMLS and Spare) will be updated as well once tested.
Also, implemented @AlexanderGetka-cbica 's request for a pipeline function (run_dlicv_pipeline) so it can be used instead of calling the CLI command inside third-party code.
Also, good thing that the installation of torch with cuda works well. Just fyi the pipeline works with torch 2.4.* versions as well(tested this because cuda 12.4 doesn't support 2.3.1)
P.S: Thanks for the VM Alex.