diff --git a/.gitignore b/.gitignore index 7ae81f2..428c9b6 100644 --- a/.gitignore +++ b/.gitignore @@ -1,30 +1,12 @@ **/.DS_Store -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa.amb -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa.ann -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa.bwt -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa.pac -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa.sa -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa.1.bt2 -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa.2.bt2 -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa.3.bt2 -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa.4.bt2 -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa.rev.1.bt2 -EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa.rev.2.bt2 -EpitopeID/ecoli_EpiID/FASTA_genome/genome.fa.amb -EpitopeID/ecoli_EpiID/FASTA_genome/genome.fa.ann -EpitopeID/ecoli_EpiID/FASTA_genome/genome.fa.bwt -EpitopeID/ecoli_EpiID/FASTA_genome/genome.fa.pac -EpitopeID/ecoli_EpiID/FASTA_genome/genome.fa.sa -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa.amb -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa.ann -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa.bwt -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa.pac -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa.sa -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa.1.bt2 -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa.2.bt2 -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa.3.bt2 -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa.4.bt2 -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa.rev.1.bt2 -EpitopeID/hg19_EpiID/FASTA_genome/genome.fa.rev.2.bt2 +EpitopeID/ecoli_EpiID/FASTA_genome/genome.fa.* +EpitopeID/sacCer3_EpiID/FASTA_genome/genome.fa* +EpitopeID/hg19_EpiID/FASTA_genome/genome.fa* +EpitopeID/hg19_EpiID_v2/FASTA_genome/genome.fa* +StrainID/hg38_VCF +StrainID/hg38_ENCODE +StrainID/hg38_DepMap +StrainID/utility_scripts/header.vcf +StrainID/utility_scripts/CL_names.txt +StrainID/utility_scripts/CSV +StrainID/utility_scripts/hg38_DepMap diff --git a/DeletionID/delScripts/detect_deletion_BAM.py b/DeletionID/delScripts/detect_deletion_BAM.py index 1d53800..a339caa 100644 --- a/DeletionID/delScripts/detect_deletion_BAM.py +++ b/DeletionID/delScripts/detect_deletion_BAM.py @@ -15,7 +15,7 @@ Log2 output minimum threshold (Default -3) -l Log2_Threshold Mappability threshold to consider (Default 0.25) -M Mappability_% -Example: python2 detect_deletion_BAM.py -b NGS.bam -c Interval.bed -m Mappability.tab -o NGS_deletion.tab -l -2 -M 0.25 +Example: python detect_deletion_BAM.py -b NGS.bam -c Interval.bed -m Mappability.tab -o NGS_deletion.tab -l -2 -M 0.25 """ def calculateDeletion(PASS): diff --git a/DeletionID/utility_scripts/get_mm10_ORF_BED.sh b/DeletionID/utility_scripts/get_mm10_ORF_BED.sh deleted file mode 100644 index 90070c0..0000000 --- a/DeletionID/utility_scripts/get_mm10_ORF_BED.sh +++ /dev/null @@ -1,17 +0,0 @@ -#!/bin/bash - -# This script retrieves the latest mm10 feature file from UCSC and parses it into BED format for downstream -# processing. The resulting BED files should be moved into the appropriate /pwd/mm10_Del/ folder - -# Required software: -# wget -# Perl - -# Retrieve latest SGD features file in GFF format -wget -c ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/635/GCF_000001635.26_GRCm38.p6/GCF_000001635.26_GRCm38.p6_genomic.gff.gz - -# Parse file to BED format while filtering -perl parsers/parse_NCBI_RefSeq_GFF.pl GCF_000001635.26_GRCm38.p6_genomic.gff.gz coord.bed - -# Clean up temporary files -rm GCF_000001635.26_GRCm38.p6_genomic.gff.gz diff --git a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.1.bt2 b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.1.bt2 new file mode 100644 index 0000000..2d69b01 Binary files /dev/null and b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.1.bt2 differ diff --git a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.2.bt2 b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.2.bt2 new file mode 100644 index 0000000..b70b3e8 Binary files /dev/null and b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.2.bt2 differ diff --git a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.3.bt2 b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.3.bt2 new file mode 100644 index 0000000..2356a12 Binary files /dev/null and b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.3.bt2 differ diff --git a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.4.bt2 b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.4.bt2 new file mode 100644 index 0000000..f09f41d Binary files /dev/null and b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.4.bt2 differ diff --git a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.amb b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.amb deleted file mode 100644 index 6b6d024..0000000 --- a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.amb +++ /dev/null @@ -1 +0,0 @@ -5492 13 0 diff --git a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.ann b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.ann deleted file mode 100644 index c5ad826..0000000 --- a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.ann +++ /dev/null @@ -1,27 +0,0 @@ -5492 13 11 -0 AID (null) -0 132 0 -0 CBP (null) -132 78 0 -0 Extended-Tap (null) -210 2096 0 -0 FLAG-3x (null) -2306 67 0 -0 FRB (null) -2373 279 0 -0 GFP (null) -2652 710 0 -0 HA_v1 (null) -3362 81 0 -0 HA_v2 (null) -3443 81 0 -0 HA_v3 (null) -3524 108 0 -0 HaloTag (null) -3632 891 0 -0 MNase_v2 (null) -4523 450 0 -0 Myc-3x (null) -4973 108 0 -0 ProteinA (null) -5081 411 0 diff --git a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.bwt b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.bwt deleted file mode 100644 index b5acac4..0000000 Binary files a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.bwt and /dev/null differ diff --git a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.pac b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.pac deleted file mode 100644 index 3038c99..0000000 Binary files a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.pac and /dev/null differ diff --git a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.rev.1.bt2 b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.rev.1.bt2 new file mode 100644 index 0000000..e24e1a2 Binary files /dev/null and b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.rev.1.bt2 differ diff --git a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.rev.2.bt2 b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.rev.2.bt2 new file mode 100644 index 0000000..7e00710 Binary files /dev/null and b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.rev.2.bt2 differ diff --git a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.sa b/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.sa deleted file mode 100644 index 77e20fc..0000000 Binary files a/EpitopeID/ecoli_EpiID/FASTA_tag/ALL_TAG.fa.sa and /dev/null differ diff --git a/EpitopeID/epiScripts/calculate_EpitopeSignificance.py b/EpitopeID/epiScripts/calculate_EpitopeSignificance.py index b295511..b38c3f3 100644 --- a/EpitopeID/epiScripts/calculate_EpitopeSignificance.py +++ b/EpitopeID/epiScripts/calculate_EpitopeSignificance.py @@ -6,7 +6,7 @@ This script takes in the paired-end table containing the stats from the EpitopeID pipeine and calculates the Poisson p-value threshold given a minimum 2-fold enrichment over the expected tags based on the bin size. -Example: python2 calculate_EpitopeSignificance.py -t PE_table.out -p 0.05 -c 10000 -s 12000000 -o PE_sig.out +Example: python calculate_EpitopeSignificance.py -t PE_table.out -p 0.05 -c 10000 -s 12000000 -o PE_sig.out """ # Main program which takes in input parameters diff --git a/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.amb b/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.amb deleted file mode 100644 index cde1749..0000000 --- a/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.amb +++ /dev/null @@ -1 +0,0 @@ -915 1 0 diff --git a/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.ann b/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.ann deleted file mode 100644 index 8ca1dd5..0000000 --- a/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.ann +++ /dev/null @@ -1,3 +0,0 @@ -915 1 11 -0 LAP-tag (null) -0 915 0 diff --git a/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.bwt b/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.bwt deleted file mode 100644 index 0258e85..0000000 Binary files a/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.bwt and /dev/null differ diff --git a/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.pac b/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.pac deleted file mode 100644 index 7dad971..0000000 --- a/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.pac +++ /dev/null @@ -1 +0,0 @@ -v券զс…;oJtjI$jcz˭'[]/E2/ԟT[]~ ckJevv~:ulړ۞};ɧGҮb*Fҭ'岺M]ge'aJ:EZIetS`V*vJ^ }JvuYN$W0#ݟ3L4 \ No newline at end of file diff --git a/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.sa b/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.sa deleted file mode 100644 index 0dead76..0000000 Binary files a/EpitopeID/hg19_EpiID/FASTA_tag/ALL_TAG.fa.sa and /dev/null differ diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_genome/README.txt b/EpitopeID/hg19_EpiID_v2/FASTA_genome/README.txt new file mode 100644 index 0000000..115a859 --- /dev/null +++ b/EpitopeID/hg19_EpiID_v2/FASTA_genome/README.txt @@ -0,0 +1 @@ +genome.fa goes here diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa new file mode 100644 index 0000000..677474b --- /dev/null +++ b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa @@ -0,0 +1,18 @@ +>3xFLAG +gggagcggaggaggttccggtggaggtggttctggagattacaaggatgacgacgataagggcgattacaaggatgacgacgataagg +gagattacaaggatgacgacgataaggtttcaggaagcggagctactaacttcagcctgctgaagcaggctggagacgtggaggagaac +cctggacctggatcgtttcgcatgattgaacaagatggattgcacgcaggttctccggccgcttgggtggagaggctattcggctatgactggg +cacaacagacaatcggctgctctgatgccgccgtgttccggctgtcagcgcaggggcgcccggttctttttgtcaagaccgacctgtccggtg +ccctgaatgaactgcaggacgaggcagcgcggctatcgtggctggccacgacgggcgttccttgcgcagctgtgctcgacgttgtcactga +agcgggaagggactggctgctattgggcgaagtgccggggcaggatctcctgtcatctcaccttgctcctgccgagaaagtatccatcatgg +ctgatgcaatgcggcggctgcatacgcttgatccggctacctgcccattcgaccaccaagcgaaacatcgcatcgagcgagcacgtactcg +gatggaagccggtcttgtcgatcaggatgatctggacgaagagcatcaggggctcgcgccagccgaactgttcgccaggctcaaggcgcg +catgcccgacggcgaggatctcgtcgtgacccatggcgatgcctgcttgccgaatatcatggtggaaaatggccgcttttctggattcatcgac +tgtggccggctgggtgtggccgaccgctatcaggacatagcgttggctacccgtgatattgctgaagagcttggcggcgaatgggctgaccg +cttcctcgtgctttacggtatcgccgctcccgattcgcagcgcatcgccttctatcgccttcttgacgagttcttctgattcgaacatc +>FKBP12-V F36V variant of FKBP12 +atgggagtgcaggtggaaaccatctccccaggagacgggcgcaccttccccaagcgcggccagacctgcgtggtgcactacaccgggatgcttgaagatggaaagaaagttgattcctcccgggacagaaacaagccctttaagtttatgctaggcaagcaggaggtgatccgaggctgggaagaaggggttgcccagatgagtgtgggtcagagagccaaactgactatatctccagattatgcctatggtgccactgggcacccaggcatcatcccaccacatgccactctcgtcttcgatgtggagcttctaaaactggaa +>HaloTag +AATGCAGAAATAGGGACAGGCTTTCCTTTTGATCCCCATTATGTAGAGGTACTAGGAGAACGTATGCATTACGTGGACGTGGGACCAAGAGATGGCACCCCAGTTCTTTTTTTACACGGAAACCCAACCAGTTCTTATGTCTGGAGGAACATCATCCCTCACGTTGCTCCAACTCACAGATGTATAGCGCCTGATCTGATTGGGATGGGTAAATCAGACAAACCCGACTTGGGCTACTTCTTCGATGACCACGTCAGATTTATGGACGCGTTCATTGAGGCACTTGGGTTGGAAGAAGTCGTCCTGGTAATACATGACTGGGGATCAGCCCTGGGATTTCATTGGGCTAAAAGGAATCCAGAGAGAGTAAAAGGGATTGCCTTCATGGAGTTTATCAGGCCCATACCCACCTGGGATGAGTGGCCCGAGTTTGCTAGAGAGACCTTCCAGGCTTTCAGGACTACCGATGTCGGCCGTAAATTGATTATTGACCAAAATGTTTTCATCGAGGGAACGTTGCCTATGGGCGTAGTCCGTCCCCTAACGGAGGTCGAAATGGATCATTACAGAGAACCGTTTTTGAACCCTGTAGACCGTGAGCCACTGTGGCGTTTTCCAAACGAATTACCGATAGCTGGCGAACCCGCTAATATCGTCGCCCTGGTAGAGGAATACATGGACTGGCTTCATCAAAGTCCTGTTCCCAAATTGTTATTTTGGGGTACACCAGGTGTATTAATTCCACCTGCCGAAGCCGCCAGGTTGGCAAAATCATTACCGAACTGCAAAGCTGTAGACATCGGCCCCGGTTTGAATCTGCTGCAGGAGGATAACCCGGATTTGATAGGGTCTGAAATCGCGCGTTGGTTGTCAACCCTGGAAATATCAGGC +>LAP-tag +TTACTTGTACAGCTCGTCCATGCCGAGAGTGATCCCGGCGGCGGTCACGAACTCCTTAAGGACCATGTGATCGCGCTTCTCGTTGGGGTCTTTGCTCAGGGCGGACTGGGTGCTCAGGTAGTGGTTGTCGGGCAGCAGCACGGGGCCGTCGCCGATGGGGGTGTTCTGCTGGTAGTGGTCGGCGAGCTGCACGCTGCCGTCCTCGATGTTGTGGCGGATCTTGAAGTTCACCTTGATGCCGTTCTTCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCCCCAGGATGTTGCCGTCCTCCTTGAAGTCGATGCCCTTCAGCTCGATGCGGTTCACCAGGGTGTCGCCCTCGAACTTCACCTCGGCGCGGGTCTTGTAGTTGCCGTCGTCCTTGAAGAAGATGGTGCGCTCCTGGACGTAGCCTTCGGGCATGGCGGACTTGAAGAAGTCGTGCTGCTTCATGTGGTCGGGGTAGCGGCTGAAGCACTGCACGCCGTAGGTCAGGGTGGTCACGAGGGTGGGCCAGGGCACGGGCAGCTTGCCGGTGGTGCAGATGAACTTCAGGGTCAGCTTGCCGTAGGTGGCATCGCCCTCGCCCTCGCCGGACACGCTGAACTTGTGGCCGTTTACGTCGCCGTCCAGCTCGACCAGGATGGGCACCACCCCGGTGAACAGCTCCTCGCCTTTGCTCACCATCGAACCCGAGGGACCGCTCGACGACAGGGGCCCCTGGAACAGAACTTCCAGGCTCGACGAACCCGAGGGACCGCTCGAACCTCCACCTCCGCTGTCCATGTGCTGGCGTTCGAATTTAGCAGCAGCGGTTTCTTTGAATTTGGCGGCGCCCTGAAAATAAAGATTCTCGCTTGCAGTAGTTGGAATATCATAATC diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.1.bt2 b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.1.bt2 new file mode 100644 index 0000000..1e295f3 Binary files /dev/null and b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.1.bt2 differ diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.2.bt2 b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.2.bt2 new file mode 100644 index 0000000..50e0111 Binary files /dev/null and b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.2.bt2 differ diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.3.bt2 b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.3.bt2 new file mode 100644 index 0000000..dfd0d39 Binary files /dev/null and b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.3.bt2 differ diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.4.bt2 b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.4.bt2 new file mode 100644 index 0000000..0d4d4d6 Binary files /dev/null and b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.4.bt2 differ diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.rev.1.bt2 b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.rev.1.bt2 new file mode 100644 index 0000000..38cedda Binary files /dev/null and b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.rev.1.bt2 differ diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.rev.2.bt2 b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.rev.2.bt2 new file mode 100644 index 0000000..f1613ae Binary files /dev/null and b/EpitopeID/hg19_EpiID_v2/FASTA_tag/ALL_TAG.fa.rev.2.bt2 differ diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/3xFLAG.fa b/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/3xFLAG.fa new file mode 100644 index 0000000..cce6c0a --- /dev/null +++ b/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/3xFLAG.fa @@ -0,0 +1,12 @@ +>3xFLAG +gggagcggaggaggttccggtggaggtggttctggagattacaaggatgacgacgataagggcgattacaaggatgacgacgataagg +gagattacaaggatgacgacgataaggtttcaggaagcggagctactaacttcagcctgctgaagcaggctggagacgtggaggagaac +cctggacctggatcgtttcgcatgattgaacaagatggattgcacgcaggttctccggccgcttgggtggagaggctattcggctatgactggg +cacaacagacaatcggctgctctgatgccgccgtgttccggctgtcagcgcaggggcgcccggttctttttgtcaagaccgacctgtccggtg +ccctgaatgaactgcaggacgaggcagcgcggctatcgtggctggccacgacgggcgttccttgcgcagctgtgctcgacgttgtcactga +agcgggaagggactggctgctattgggcgaagtgccggggcaggatctcctgtcatctcaccttgctcctgccgagaaagtatccatcatgg +ctgatgcaatgcggcggctgcatacgcttgatccggctacctgcccattcgaccaccaagcgaaacatcgcatcgagcgagcacgtactcg +gatggaagccggtcttgtcgatcaggatgatctggacgaagagcatcaggggctcgcgccagccgaactgttcgccaggctcaaggcgcg +catgcccgacggcgaggatctcgtcgtgacccatggcgatgcctgcttgccgaatatcatggtggaaaatggccgcttttctggattcatcgac +tgtggccggctgggtgtggccgaccgctatcaggacatagcgttggctacccgtgatattgctgaagagcttggcggcgaatgggctgaccg +cttcctcgtgctttacggtatcgccgctcccgattcgcagcgcatcgccttctatcgccttcttgacgagttcttctgattcgaacatc diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/FKBP12-V.fa b/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/FKBP12-V.fa new file mode 100644 index 0000000..5b17e4d --- /dev/null +++ b/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/FKBP12-V.fa @@ -0,0 +1,2 @@ +>FKBP12-V F36V variant of FKBP12 +atgggagtgcaggtggaaaccatctccccaggagacgggcgcaccttccccaagcgcggccagacctgcgtggtgcactacaccgggatgcttgaagatggaaagaaagttgattcctcccgggacagaaacaagccctttaagtttatgctaggcaagcaggaggtgatccgaggctgggaagaaggggttgcccagatgagtgtgggtcagagagccaaactgactatatctccagattatgcctatggtgccactgggcacccaggcatcatcccaccacatgccactctcgtcttcgatgtggagcttctaaaactggaa diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/HaloTag.fa b/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/HaloTag.fa new file mode 100644 index 0000000..27c7629 --- /dev/null +++ b/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/HaloTag.fa @@ -0,0 +1,2 @@ +>HaloTag +AATGCAGAAATAGGGACAGGCTTTCCTTTTGATCCCCATTATGTAGAGGTACTAGGAGAACGTATGCATTACGTGGACGTGGGACCAAGAGATGGCACCCCAGTTCTTTTTTTACACGGAAACCCAACCAGTTCTTATGTCTGGAGGAACATCATCCCTCACGTTGCTCCAACTCACAGATGTATAGCGCCTGATCTGATTGGGATGGGTAAATCAGACAAACCCGACTTGGGCTACTTCTTCGATGACCACGTCAGATTTATGGACGCGTTCATTGAGGCACTTGGGTTGGAAGAAGTCGTCCTGGTAATACATGACTGGGGATCAGCCCTGGGATTTCATTGGGCTAAAAGGAATCCAGAGAGAGTAAAAGGGATTGCCTTCATGGAGTTTATCAGGCCCATACCCACCTGGGATGAGTGGCCCGAGTTTGCTAGAGAGACCTTCCAGGCTTTCAGGACTACCGATGTCGGCCGTAAATTGATTATTGACCAAAATGTTTTCATCGAGGGAACGTTGCCTATGGGCGTAGTCCGTCCCCTAACGGAGGTCGAAATGGATCATTACAGAGAACCGTTTTTGAACCCTGTAGACCGTGAGCCACTGTGGCGTTTTCCAAACGAATTACCGATAGCTGGCGAACCCGCTAATATCGTCGCCCTGGTAGAGGAATACATGGACTGGCTTCATCAAAGTCCTGTTCCCAAATTGTTATTTTGGGGTACACCAGGTGTATTAATTCCACCTGCCGAAGCCGCCAGGTTGGCAAAATCATTACCGAACTGCAAAGCTGTAGACATCGGCCCCGGTTTGAATCTGCTGCAGGAGGATAACCCGGATTTGATAGGGTCTGAAATCGCGCGTTGGTTGTCAACCCTGGAAATATCAGGC diff --git a/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/LAP-tag.fa b/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/LAP-tag.fa new file mode 100644 index 0000000..cc1cc31 --- /dev/null +++ b/EpitopeID/hg19_EpiID_v2/FASTA_tag/Tag_DB/LAP-tag.fa @@ -0,0 +1,2 @@ +>LAP-tag +TTACTTGTACAGCTCGTCCATGCCGAGAGTGATCCCGGCGGCGGTCACGAACTCCTTAAGGACCATGTGATCGCGCTTCTCGTTGGGGTCTTTGCTCAGGGCGGACTGGGTGCTCAGGTAGTGGTTGTCGGGCAGCAGCACGGGGCCGTCGCCGATGGGGGTGTTCTGCTGGTAGTGGTCGGCGAGCTGCACGCTGCCGTCCTCGATGTTGTGGCGGATCTTGAAGTTCACCTTGATGCCGTTCTTCTGCTTGTCGGCCATGATATAGACGTTGTGGCTGTTGTAGTTGTACTCCAGCTTGTGCCCCAGGATGTTGCCGTCCTCCTTGAAGTCGATGCCCTTCAGCTCGATGCGGTTCACCAGGGTGTCGCCCTCGAACTTCACCTCGGCGCGGGTCTTGTAGTTGCCGTCGTCCTTGAAGAAGATGGTGCGCTCCTGGACGTAGCCTTCGGGCATGGCGGACTTGAAGAAGTCGTGCTGCTTCATGTGGTCGGGGTAGCGGCTGAAGCACTGCACGCCGTAGGTCAGGGTGGTCACGAGGGTGGGCCAGGGCACGGGCAGCTTGCCGGTGGTGCAGATGAACTTCAGGGTCAGCTTGCCGTAGGTGGCATCGCCCTCGCCCTCGCCGGACACGCTGAACTTGTGGCCGTTTACGTCGCCGTCCAGCTCGACCAGGATGGGCACCACCCCGGTGAACAGCTCCTCGCCTTTGCTCACCATCGAACCCGAGGGACCGCTCGACGACAGGGGCCCCTGGAACAGAACTTCCAGGCTCGACGAACCCGAGGGACCGCTCGAACCTCCACCTCCGCTGTCCATGTGCTGGCGTTCGAATTTAGCAGCAGCGGTTTCTTTGAATTTGGCGGCGCCCTGAAAATAAAGATTCTCGCTTGCAGTAGTTGGAATATCATAATC diff --git a/EpitopeID/hg19_EpiID_v2/annotation/genome_annotation.gff.gz b/EpitopeID/hg19_EpiID_v2/annotation/genome_annotation.gff.gz new file mode 100644 index 0000000..cba73dd Binary files /dev/null and b/EpitopeID/hg19_EpiID_v2/annotation/genome_annotation.gff.gz differ diff --git a/EpitopeID/hg19_EpiID_v2/blacklist_filter/blacklist.bed b/EpitopeID/hg19_EpiID_v2/blacklist_filter/blacklist.bed new file mode 100644 index 0000000..cd8841c --- /dev/null +++ b/EpitopeID/hg19_EpiID_v2/blacklist_filter/blacklist.bed @@ -0,0 +1,2060 @@ +chr1 10468 11447 TAR1 1000 . +chr1 564463 570304 chrM 1000 . +chr1 724137 727026 (GAATG)n 1000 . +chr1 825006 825115 BSR/Beta 1000 . +chr1 1815107 1815204 LSU-rRNA_Hsa 1000 . +chr1 3639224 3639747 TAR1 1000 . +chr1 4363064 4363242 (CATTC)n 1000 . +chr1 4417098 4417211 LSU-rRNA_Hsa 1000 . +chr1 16393109 16393136 (GAATG)n 1000 . +chr1 17562054 17562204 TAR1 1000 . +chr1 17568001 17568197 (GAATG)n 1000 . +chr1 22699407 22699475 (GAATG)n 1000 . +chr1 25483508 25483621 LSU-rRNA_Hsa 1000 . +chr1 28242609 28242680 LSU-rRNA_Hsa 1000 . +chr1 30802098 30802177 LSU-rRNA_Hsa 1000 . +chr1 31254019 31254168 (GAGTG)n 1000 . +chr1 32833269 32833349 SSU-rRNA_Hsa 1000 . +chr1 37315505 37315568 LSU-rRNA_Hsa 1000 . +chr1 39354488 39354536 LSU-rRNA_Hsa 1000 . +chr1 42779298 42779471 LSU-rRNA_Hsa 1000 . +chr1 43045772 43046173 LSU-rRNA_Hsa 1000 . +chr1 43215463 43215643 LSU-rRNA_Hsa 1000 . +chr1 46902468 46902566 LSU-rRNA_Hsa 1000 . +chr1 58281056 58281119 (GAATG)n 1000 . +chr1 65613165 65613189 (GAGTG)n 1000 . +chr1 68458490 68458634 SSU-rRNA_Hsa 1000 . +chr1 68461907 68462474 SSU-rRNA_Hsa 1000 . +chr1 76240336 76240470 LSU-rRNA_Hsa 1000 . +chr1 82699241 82699456 ALR/Alpha 1000 . +chr1 91852785 91853147 LSU-rRNA_Hsa 1000 . +chr1 92972727 92972802 LSU-rRNA_Hsa 1000 . +chr1 100271938 100272091 SSU-rRNA_Hsa 1000 . +chr1 103237413 103237658 TAR1 1000 . +chr1 104403173 104417026 ALR/Alpha 1000 . +chr1 108113071 108113729 LSU-rRNA_Hsa 1000 . +chr1 109786180 109786293 LSU-rRNA_Hsa 1000 . +chr1 110622671 110622863 (CATTC)n 1000 . +chr1 110797516 110797548 (CATTC)n 1000 . +chr1 120543883 120544125 LSU-rRNA_Hsa 1000 . +chr1 121351587 121476216 ALR/Alpha 1000 . +chr1 121478368 121485429 ALR/Alpha 1000 . +chr1 142535604 142543007 (GAATG)n 1000 . +chr1 142792627 142793117 chrM 1000 . +chr1 142967021 142967720 (CATTC)n 1000 . +chr1 143243223 143243691 chrM 1000 . +chr1 143274493 143275129 TAR1 1000 . +chr1 143279251 143281250 ACRO1 1000 . +chr1 143283882 143284138 ACRO1 1000 . +chr1 143344705 143345190 chrM 1000 . +chr1 145277249 145277491 LSU-rRNA_Hsa 1000 . +chr1 145994696 145994716 HSATII 1000 . +chr1 147281583 147281640 (GAGTG)n 1000 . +chr1 148927799 148928362 TAR1 1000 . +chr1 149033186 149035828 HSATII 1000 . +chr1 150239193 150239284 LSU-rRNA_Hsa 1000 . +chr1 157139812 157139887 LSU-rRNA_Hsa 1000 . +chr1 166640296 166640359 LSU-rRNA_Hsa 1000 . +chr1 168795896 168796039 SSU-rRNA_Hsa 1000 . +chr1 169878691 169878920 LSU-rRNA_Hsa 1000 . +chr1 173690784 173690945 LSU-rRNA_Hsa 1000 . +chr1 182181587 182181637 LSU-rRNA_Hsa 1000 . +chr1 200428778 200428912 LSU-rRNA_Hsa 1000 . +chr1 201225039 201227577 (GAGTG)n 1000 . +chr1 209402060 209402133 (GAATG)n 1000 . +chr1 210639259 210639432 (GAATG)n 1000 . +chr1 211799052 211799116 LSU-rRNA_Hsa 1000 . +chr1 211799883 211800066 LSU-rRNA_Hsa 1000 . +chr1 220269322 220269358 (GAATG)n 1000 . +chr1 222522768 222522879 LSU-rRNA_Hsa 1000 . +chr1 223192518 223192539 (CATTC)n 1000 . +chr1 223381275 223381356 ALR/Alpha 1000 . +chr1 224199392 224204253 (GAATG)n 1000 . +chr1 227874275 227874356 BSR/Beta 1000 . +chr1 231510065 231510258 LSU-rRNA_Hsa 1000 . +chr1 233318475 233318498 (CATTC)n 1000 . +chr1 237766308 237766764 LSU-rRNA_Hsa 1000 . +chr1 238104075 238109627 chrM 1000 . +chr1 238110375 238110609 chrM 1000 . +chr1 242108860 242108991 LSU-rRNA_Hsa 1000 . +chr1 247438962 247439741 (GAATG)n 1000 . +chr1 247440436 247440537 (GAGTG)n 1000 . +chr1 249238110 249239838 TAR1 1000 . +chr10 753792 753896 ALR/Alpha 1000 . +chr10 5341746 5341873 LSU-rRNA_Hsa 1000 . +chr10 7764909 7765219 (GAGTG)n 1000 . +chr10 9206289 9206370 LSU-rRNA_Hsa 1000 . +chr10 17695218 17695378 ALR/Alpha 1000 . +chr10 18841533 18862467 (CATTC)n 1000 . +chr10 32122000 32122053 LSU-rRNA_Hsa 1000 . +chr10 32699246 32699626 LSU-rRNA_Hsa 1000 . +chr10 35370876 35370941 LSU-rRNA_Hsa 1000 . +chr10 36717251 36717338 (GAATG)n 1000 . +chr10 37898052 37898142 (GAATG)n 1000 . +chr10 38123895 38123948 LSU-rRNA_Hsa 1000 . +chr10 38772340 38818833 (GAATG)n 1000 . +chr10 38868886 38888829 (GAATG)n 1000 . +chr10 38908596 38908960 TAR1 1000 . +chr10 39076608 39154933 (CATTC)n 1000 . +chr10 42354937 42421540 (CATTC)n 1000 . +chr10 42422759 42434024 ALR/Alpha 1000 . +chr10 42436109 42436311 ALR/Alpha 1000 . +chr10 42442298 42463726 ALR/Alpha 1000 . +chr10 42464829 42484858 ALR/Alpha 1000 . +chr10 42490810 42523952 ALR/Alpha 1000 . +chr10 42525790 42526055 ALR/Alpha 1000 . +chr10 42527021 42546685 ALR/Alpha 1000 . +chr10 42596696 42602082 HSATII 1000 . +chr10 42661278 42667608 (GAATG)n 1000 . +chr10 42790569 42818362 (CATTC)n 1000 . +chr10 50911036 50911419 LSU-rRNA_Hsa 1000 . +chr10 55643222 55643351 LSU-rRNA_Hsa 1000 . +chr10 57359616 57359764 LSU-rRNA_Hsa 1000 . +chr10 59545428 59545469 TAR1 1000 . +chr10 59546101 59546406 TAR1 1000 . +chr10 61447835 61448128 LSU-rRNA_Hsa 1000 . +chr10 68805210 68805496 LSU-rRNA_Hsa 1000 . +chr10 70770154 70770289 LSU-rRNA_Hsa 1000 . +chr10 72586041 72586074 (CATTC)n 1000 . +chr10 74699083 74699489 ALR/Alpha 1000 . +chr10 75986832 75986898 LSU-rRNA_Hsa 1000 . +chr10 79073779 79073814 (GAATG)n 1000 . +chr10 79729671 79729756 LSU-rRNA_Hsa 1000 . +chr10 80676028 80676061 (CATTC)n 1000 . +chr10 91637246 91637275 LSU-rRNA_Hsa 1000 . +chr10 101198811 101198878 LSU-rRNA_Hsa 1000 . +chr10 101817139 101817658 chrM 1000 . +chr10 106406524 106406609 LSU-rRNA_Hsa 1000 . +chr10 109045348 109045411 (CATTC)n 1000 . +chr10 119941157 119941246 (GAATG)n 1000 . +chr10 122289205 122289270 LSU-rRNA_Hsa 1000 . +chr10 129241635 129241789 TAR1 1000 . +chr10 134171915 134172465 (GAGTG)n 1000 . +chr10 134565969 134566139 (GAGTG)n 1000 . +chr10 135499163 135502705 BSR/Beta 1000 . +chr10 135522754 135524387 TAR1 1000 . +chr11 189419 190691 TAR1 1000 . +chr11 1757751 1758087 (GAGTG)n 1000 . +chr11 6831669 6831838 ALR/Alpha 1000 . +chr11 10529433 10529842 chrM 1000 . +chr11 10531444 10531883 chrM 1000 . +chr11 13285470 13285642 SSU-rRNA_Hsa 1000 . +chr11 18770707 18770826 LSU-rRNA_Hsa 1000 . +chr11 22502384 22502526 LSU-rRNA_Hsa 1000 . +chr11 23610374 23610485 TAR1 1000 . +chr11 38433068 38433203 TAR1 1000 . +chr11 40282768 40282799 LSU-rRNA_Hsa 1000 . +chr11 40556218 40556310 ALR/Alpha 1000 . +chr11 40864419 40864597 ALR/Alpha 1000 . +chr11 48671549 48674330 ALR/Alpha 1000 . +chr11 48680071 48699432 ALR/Alpha 1000 . +chr11 48703022 48704596 ALR/Alpha 1000 . +chr11 48710699 48721348 ALR/Alpha 1000 . +chr11 48724057 48750824 ALR/Alpha 1000 . +chr11 48753829 48755540 ALR/Alpha 1000 . +chr11 48761585 48766189 ALR/Alpha 1000 . +chr11 48772268 48782963 ALR/Alpha 1000 . +chr11 48787391 48793186 ALR/Alpha 1000 . +chr11 48796004 48821496 ALR/Alpha 1000 . +chr11 48826168 48868838 ALR/Alpha 1000 . +chr11 48876865 48885931 ALR/Alpha 1000 . +chr11 48886840 48900993 ALR/Alpha 1000 . +chr11 48931291 48949264 ALR/Alpha 1000 . +chr11 48952739 48963980 ALR/Alpha 1000 . +chr11 50072292 50077862 ALR/Alpha 1000 . +chr11 50319073 50342958 ALR/Alpha 1000 . +chr11 50343967 50345754 ALR/Alpha 1000 . +chr11 50349193 50359094 ALR/Alpha 1000 . +chr11 50360111 50367059 ALR/Alpha 1000 . +chr11 50382536 50397279 ALR/Alpha 1000 . +chr11 50407172 50417656 ALR/Alpha 1000 . +chr11 50419076 50430964 ALR/Alpha 1000 . +chr11 50435079 50447011 ALR/Alpha 1000 . +chr11 50454793 50456574 ALR/Alpha 1000 . +chr11 50459091 50467609 ALR/Alpha 1000 . +chr11 50473617 50505656 ALR/Alpha 1000 . +chr11 50508233 50512019 ALR/Alpha 1000 . +chr11 50513583 50519383 ALR/Alpha 1000 . +chr11 50522087 50588681 ALR/Alpha 1000 . +chr11 50596752 50607172 ALR/Alpha 1000 . +chr11 50609249 50613199 ALR/Alpha 1000 . +chr11 50613828 50653596 ALR/Alpha 1000 . +chr11 50659779 50662436 ALR/Alpha 1000 . +chr11 50668614 50672189 ALR/Alpha 1000 . +chr11 50673104 50682163 ALR/Alpha 1000 . +chr11 50684836 50702151 ALR/Alpha 1000 . +chr11 50710444 50772520 ALR/Alpha 1000 . +chr11 50778535 50783853 ALR/Alpha 1000 . +chr11 51090856 51096125 ALR/Alpha 1000 . +chr11 51100035 51126399 ALR/Alpha 1000 . +chr11 51129969 51147348 ALR/Alpha 1000 . +chr11 51149336 51154429 ALR/Alpha 1000 . +chr11 51155045 51161930 ALR/Alpha 1000 . +chr11 51162917 51164740 ALR/Alpha 1000 . +chr11 51170764 51222950 ALR/Alpha 1000 . +chr11 51225874 51245685 ALR/Alpha 1000 . +chr11 51248535 51263330 ALR/Alpha 1000 . +chr11 51264341 51268200 ALR/Alpha 1000 . +chr11 51274187 51274454 ALR/Alpha 1000 . +chr11 51281408 51281978 ALR/Alpha 1000 . +chr11 51286928 51315626 ALR/Alpha 1000 . +chr11 51321665 51328678 ALR/Alpha 1000 . +chr11 51334404 51336922 ALR/Alpha 1000 . +chr11 51337900 51353089 ALR/Alpha 1000 . +chr11 51360574 51373894 ALR/Alpha 1000 . +chr11 51567242 51594205 ALR/Alpha 1000 . +chr11 54694205 54714442 ALR/Alpha 1000 . +chr11 54720466 54722289 ALR/Alpha 1000 . +chr11 54723276 54730161 ALR/Alpha 1000 . +chr11 54730777 54735697 ALR/Alpha 1000 . +chr11 54737685 54755063 ALR/Alpha 1000 . +chr11 54758633 54784999 ALR/Alpha 1000 . +chr11 54788908 54811205 ALR/Alpha 1000 . +chr11 54811957 54851844 ALR/Alpha 1000 . +chr11 54858027 54875969 ALR/Alpha 1000 . +chr11 54879359 54895335 ALR/Alpha 1000 . +chr11 54898336 54900191 ALR/Alpha 1000 . +chr11 54906335 54934462 ALR/Alpha 1000 . +chr11 54941143 54965813 ALR/Alpha 1000 . +chr11 54966964 54969146 ALR/Alpha 1000 . +chr11 54969799 54976439 ALR/Alpha 1000 . +chr11 54978043 55001800 ALR/Alpha 1000 . +chr11 55006467 55027630 ALR/Alpha 1000 . +chr11 67999042 67999437 LSU-rRNA_Hsa 1000 . +chr11 72158237 72158268 (CATTC)n 1000 . +chr11 73221705 73221868 chrM 1000 . +chr11 73503098 73503365 LSU-rRNA_Hsa 1000 . +chr11 74903625 74904174 (GAATG)n 1000 . +chr11 75858509 75858684 LSU-rRNA_Hsa 1000 . +chr11 77597473 77597831 LSU-rRNA_Hsa 1000 . +chr11 82815952 82816035 LSU-rRNA_Hsa 1000 . +chr11 84792605 84792846 SSU-rRNA_Hsa 1000 . +chr11 85142122 85142227 ALR/Alpha 1000 . +chr11 85195011 85195307 LSU-rRNA_Hsa 1000 . +chr11 85746312 85746437 LSU-rRNA_Hsa 1000 . +chr11 85755321 85755619 LSU-rRNA_Hsa 1000 . +chr11 86246362 86246512 SSU-rRNA_Hsa 1000 . +chr11 94453232 94453365 LSU-rRNA_Hsa 1000 . +chr11 102587854 102587923 (CATTC)n 1000 . +chr11 103279643 103279808 LSU-rRNA_Hsa 1000 . +chr11 103293908 103293980 (GAATG)n 1000 . +chr11 111691907 111692748 LSU-rRNA_Hsa 1000 . +chr11 129278797 129279018 LSU-rRNA_Hsa 1000 . +chr11 134945588 134946457 TAR1 1000 . +chr12 94147 95158 TAR1 1000 . +chr12 524322 524373 ALR/Alpha 1000 . +chr12 13679271 13679660 (GAATG)n 1000 . +chr12 18511178 18511391 LSU-rRNA_Hsa 1000 . +chr12 19926144 19926303 LSU-rRNA_Hsa 1000 . +chr12 20704357 20704522 SSU-rRNA_Hsa 1000 . +chr12 27842283 27842422 TAR1 1000 . +chr12 30887692 30887752 SSU-rRNA_Hsa 1000 . +chr12 34372315 34372825 LSU-rRNA_Hsa 1000 . +chr12 34432028 34439069 ALR/Alpha 1000 . +chr12 34560313 34578430 ALR/Alpha 1000 . +chr12 34579317 34580988 ALR/Alpha 1000 . +chr12 34581598 34583925 ALR/Alpha 1000 . +chr12 34589312 34598965 ALR/Alpha 1000 . +chr12 34599949 34614013 ALR/Alpha 1000 . +chr12 34615955 34616980 ALR/Alpha 1000 . +chr12 34623129 34629234 ALR/Alpha 1000 . +chr12 34635411 34674042 ALR/Alpha 1000 . +chr12 34683686 34728213 ALR/Alpha 1000 . +chr12 34731290 34733499 ALR/Alpha 1000 . +chr12 34734885 34748662 ALR/Alpha 1000 . +chr12 34761058 34761293 ALR/Alpha 1000 . +chr12 34767593 34772553 ALR/Alpha 1000 . +chr12 34774242 34774654 ALR/Alpha 1000 . +chr12 34782206 34782438 ALR/Alpha 1000 . +chr12 34784647 34792477 ALR/Alpha 1000 . +chr12 34798608 34820005 ALR/Alpha 1000 . +chr12 34826046 34856684 ALR/Alpha 1000 . +chr12 37915829 37925832 ALR/Alpha 1000 . +chr12 37930130 37933999 ALR/Alpha 1000 . +chr12 37989875 38054568 ALR/Alpha 1000 . +chr12 38060550 38075410 ALR/Alpha 1000 . +chr12 38081563 38131889 ALR/Alpha 1000 . +chr12 38132869 38155500 ALR/Alpha 1000 . +chr12 38161412 38171008 ALR/Alpha 1000 . +chr12 38173033 38180708 ALR/Alpha 1000 . +chr12 38186858 38207515 ALR/Alpha 1000 . +chr12 38209752 38217123 ALR/Alpha 1000 . +chr12 38219288 38255110 ALR/Alpha 1000 . +chr12 38255917 38259390 ALR/Alpha 1000 . +chr12 38262925 38286206 ALR/Alpha 1000 . +chr12 38292355 38322258 ALR/Alpha 1000 . +chr12 38323076 38337270 ALR/Alpha 1000 . +chr12 38339691 38346267 ALR/Alpha 1000 . +chr12 38346798 38389333 ALR/Alpha 1000 . +chr12 38390356 38422042 ALR/Alpha 1000 . +chr12 38424982 38425232 ALR/Alpha 1000 . +chr12 38431372 38441295 ALR/Alpha 1000 . +chr12 38531376 38531930 LSU-rRNA_Hsa 1000 . +chr12 38985548 38986017 ALR/Alpha 1000 . +chr12 42168434 42168473 (GAATG)n 1000 . +chr12 48330535 48330581 ALR/Alpha 1000 . +chr12 48588240 48588308 LSU-rRNA_Hsa 1000 . +chr12 55154341 55154363 (GAGTG)n 1000 . +chr12 56590697 56590753 LSU-rRNA_Hsa 1000 . +chr12 57264352 57264465 LSU-rRNA_Hsa 1000 . +chr12 58559331 58559351 (CATTC)n 1000 . +chr12 60878044 60878080 LSU-rRNA_Hsa 1000 . +chr12 67766646 67766781 LSU-rRNA_Hsa 1000 . +chr12 69322838 69322910 LSU-rRNA_Hsa 1000 . +chr12 70063035 70063099 LSU-rRNA_Hsa 1000 . +chr12 75347340 75347612 LSU-rRNA_Hsa 1000 . +chr12 75891844 75892084 LSU-rRNA_Hsa 1000 . +chr12 80033581 80033700 (CATTC)n 1000 . +chr12 84694905 84694942 (GAATG)n 1000 . +chr12 85562696 85562760 LSU-rRNA_Hsa 1000 . +chr12 91872762 91872799 (GAATG)n 1000 . +chr12 94448738 94448903 LSU-rRNA_Hsa 1000 . +chr12 94450200 94450285 LSU-rRNA_Hsa 1000 . +chr12 94724243 94724329 SSU-rRNA_Hsa 1000 . +chr12 102279095 102279224 LSU-rRNA_Hsa 1000 . +chr12 104319849 104319959 SSU-rRNA_Hsa 1000 . +chr12 113166368 113166433 LSU-rRNA_Hsa 1000 . +chr12 113518387 113518432 (GAATG)n 1000 . +chr12 118573638 118573695 LSU-rRNA_Hsa 1000 . +chr12 125025555 125025651 (GAGTG)n 1000 . +chr12 125894104 125895755 (GAGTG)n 1000 . +chr12 127650452 127650987 LSU-rRNA_Hsa 1000 . +chr12 127784747 127784870 TAR1 1000 . +chr12 129489439 129490005 (GAGTG)n 1000 . +chr12 131177262 131177362 (GAATG)n 1000 . +chr12 132072799 132073289 (GAGTG)n 1000 . +chr12 133840797 133841331 TAR1 1000 . +chr13 23516626 23516702 (GAATG)n 1000 . +chr13 23996338 23999063 ALR/Alpha 1000 . +chr13 24938410 24938486 (GAATG)n 1000 . +chr13 25096442 25096696 ALR/Alpha 1000 . +chr13 30131964 30132226 (GAGTG)n 1000 . +chr13 35378111 35378160 SSU-rRNA_Hsa 1000 . +chr13 41472870 41472890 (CATTC)n 1000 . +chr13 47757965 47758018 (CATTC)n 1000 . +chr13 54596459 54596525 LSU-rRNA_Hsa 1000 . +chr13 68208612 68208701 LSU-rRNA_Hsa 1000 . +chr13 68965870 68965961 LSU-rRNA_Hsa 1000 . +chr13 74256480 74256526 (CATTC)n 1000 . +chr13 77974267 77974396 ALR/Alpha 1000 . +chr13 82967036 82967350 TAR1 1000 . +chr13 85257702 85257813 LSU-rRNA_Hsa 1000 . +chr13 94576213 94576247 (GAATG)n 1000 . +chr13 95286500 95286593 LSU-rRNA_Hsa 1000 . +chr13 102311110 102311221 LSU-rRNA_Hsa 1000 . +chr13 104850117 104850200 LSU-rRNA_Hsa 1000 . +chr13 110076471 110076727 chrM 1000 . +chr13 113598641 113598869 SSU-rRNA_Hsa 1000 . +chr13 114443945 114444290 TAR1 1000 . +chr13 114981350 114981581 BSR/Beta 1000 . +chr14 19000005 19048872 ALR/Alpha 1000 . +chr14 19050769 19056732 ALR/Alpha 1000 . +chr14 19359112 19359664 TAR1 1000 . +chr14 19629676 19630683 ALR/Alpha 1000 . +chr14 19944710 19945717 ALR/Alpha 1000 . +chr14 22198247 22198313 LSU-rRNA_Hsa 1000 . +chr14 23986957 23987095 LSU-rRNA_Hsa 1000 . +chr14 32953303 32954324 chrM 1000 . +chr14 40442272 40442622 TAR1 1000 . +chr14 43722995 43723045 LSU-rRNA_Hsa 1000 . +chr14 45486421 45486547 LSU-rRNA_Hsa 1000 . +chr14 49480412 49480478 LSU-rRNA_Hsa 1000 . +chr14 53135644 53135798 ALR/Alpha 1000 . +chr14 55423374 55423429 LSU-rRNA_Hsa 1000 . +chr14 56679273 56679413 LSU-rRNA_Hsa 1000 . +chr14 61089036 61089149 LSU-rRNA_Hsa 1000 . +chr14 72684648 72684746 LSU-rRNA_Hsa 1000 . +chr14 88596629 88597173 LSU-rRNA_Hsa 1000 . +chr14 90341370 90341573 SSU-rRNA_Hsa 1000 . +chr14 91737033 91737074 SSU-rRNA_Hsa 1000 . +chr14 92944235 92944262 (CATTC)n 1000 . +chr14 95385354 95385470 BSR/Beta 1000 . +chr14 95833039 95833076 (GAATG)n 1000 . +chr14 104945899 104945975 (GAATG)n 1000 . +chr14 105195912 105196275 TAR1 1000 . +chr14 105321397 105321571 (GAGTG)n 1000 . +chr14 106174426 106174492 (GAGTG)n 1000 . +chr15 20000000 20022125 ALR/Alpha 1000 . +chr15 20024080 20028031 ALR/Alpha 1000 . +chr15 20030630 20034558 ALR/Alpha 1000 . +chr15 20035769 20043808 ALR/Alpha 1000 . +chr15 20353013 20353665 TAR1 1000 . +chr15 20487924 20488219 TAR1 1000 . +chr15 21359628 21360263 TAR1 1000 . +chr15 24999161 24999477 ALR/Alpha 1000 . +chr15 27997239 27997544 LSU-rRNA_Hsa 1000 . +chr15 28139731 28140375 BSR/Beta 1000 . +chr15 34340075 34340119 LSU-rRNA_Hsa 1000 . +chr15 35760565 35760654 SSU-rRNA_Hsa 1000 . +chr15 46366807 46367610 LSU-rRNA_Hsa 1000 . +chr15 46368204 46368706 LSU-rRNA_Hsa 1000 . +chr15 50341119 50341452 TAR1 1000 . +chr15 53116230 53116250 (CATTC)n 1000 . +chr15 59203644 59203752 SSU-rRNA_Hsa 1000 . +chr15 59511962 59512173 ALR/Alpha 1000 . +chr15 59616545 59616641 LSU-rRNA_Hsa 1000 . +chr15 64683112 64683154 SSU-rRNA_Hsa 1000 . +chr15 80445513 80445569 (GAGTG)n 1000 . +chr15 88362145 88362252 SSU-rRNA_Hsa 1000 . +chr15 94450774 94451125 ALR/Alpha 1000 . +chr15 101811261 101811338 LSU-rRNA_Hsa 1000 . +chr15 102519722 102521010 TAR1 1000 . +chr16 60058 61142 TAR1 1000 . +chr16 3417485 3419049 chrM 1000 . +chr16 3419741 3422107 chrM 1000 . +chr16 3422636 3422702 chrM 1000 . +chr16 5550196 5550256 (CATTC)n 1000 . +chr16 6310408 6310491 (GAATG)n 1000 . +chr16 12190364 12190443 BSR/Beta 1000 . +chr16 13248905 13249134 (GAATG)n 1000 . +chr16 23032884 23033059 (GAGTG)n 1000 . +chr16 23443673 23443819 LSU-rRNA_Hsa 1000 . +chr16 23761261 23761349 SSU-rRNA_Hsa 1000 . +chr16 24424194 24424265 LSU-rRNA_Hsa 1000 . +chr16 28173466 28173533 LSU-rRNA_Hsa 1000 . +chr16 29941276 29941461 SSU-rRNA_Hsa 1000 . +chr16 32276511 32276756 BSR/Beta 1000 . +chr16 32473142 32473841 TAR1 1000 . +chr16 32493036 32570826 ALR/Alpha 1000 . +chr16 32571337 32572232 ALR/Alpha 1000 . +chr16 32574990 32588304 ALR/Alpha 1000 . +chr16 32590063 32598801 ALR/Alpha 1000 . +chr16 32599718 32603558 ALR/Alpha 1000 . +chr16 32675324 32675569 BSR/Beta 1000 . +chr16 33217459 33217704 BSR/Beta 1000 . +chr16 33273998 33274243 BSR/Beta 1000 . +chr16 33373923 33374214 TAR1 1000 . +chr16 33509672 33510071 TAR1 1000 . +chr16 33864525 33910905 (GAGTG)n 1000 . +chr16 33912452 33920915 ALR/Alpha 1000 . +chr16 33962496 33964361 SSU-rRNA_Hsa 1000 . +chr16 33968325 33969862 ALR/Alpha 1000 . +chr16 33971040 33979902 ALR/Alpha 1000 . +chr16 33981455 33998804 ALR/Alpha 1000 . +chr16 34000186 34002761 ALR/Alpha 1000 . +chr16 34003719 34016791 ALR/Alpha 1000 . +chr16 34021342 34023145 ALR/Alpha 1000 . +chr16 34180539 34197030 HSATII 1000 . +chr16 34530115 34542632 BSR/Beta 1000 . +chr16 34560977 34561066 ALR/Alpha 1000 . +chr16 34596974 34606456 BSR/Beta 1000 . +chr16 34661995 34664141 BSR/Beta 1000 . +chr16 34682894 34685392 BSR/Beta 1000 . +chr16 34729014 34732569 BSR/Beta 1000 . +chr16 34789896 34806999 BSR/Beta 1000 . +chr16 34883460 34898122 ALR/Alpha 1000 . +chr16 34904669 34906559 ALR/Alpha 1000 . +chr16 34907613 34917676 ALR/Alpha 1000 . +chr16 34930055 34932190 ALR/Alpha 1000 . +chr16 34935231 34945101 ALR/Alpha 1000 . +chr16 34989886 35014295 ALR/Alpha 1000 . +chr16 35014971 35020566 ALR/Alpha 1000 . +chr16 35149246 35157585 ALR/Alpha 1000 . +chr16 35158151 35169154 ALR/Alpha 1000 . +chr16 35169760 35178074 ALR/Alpha 1000 . +chr16 35184220 35186736 ALR/Alpha 1000 . +chr16 35193625 35197562 ALR/Alpha 1000 . +chr16 35199288 35261829 ALR/Alpha 1000 . +chr16 35264308 35281579 ALR/Alpha 1000 . +chr16 35283646 35285796 ALR/Alpha 1000 . +chr16 46385803 46456584 HSATII 1000 . +chr16 46497657 46500494 HSATII 1000 . +chr16 47519472 47519518 LSU-rRNA_Hsa 1000 . +chr16 47538629 47539297 LSU-rRNA_Hsa 1000 . +chr16 50159790 50159852 LSU-rRNA_Hsa 1000 . +chr16 55758635 55758833 LSU-rRNA_Hsa 1000 . +chr16 55789820 55789974 LSU-rRNA_Hsa 1000 . +chr16 55871465 55871650 LSU-rRNA_Hsa 1000 . +chr16 55875367 55875655 LSU-rRNA_Hsa 1000 . +chr16 71476330 71476357 (GAATG)n 1000 . +chr16 80430469 80430698 (GAATG)n 1000 . +chr16 81901992 81902316 LSU-rRNA_Hsa 1000 . +chr16 85040735 85041063 (GAATG)n 1000 . +chr16 86923759 86923953 BSR/Beta 1000 . +chr17 5406272 5406461 (GAATG)n 1000 . +chr17 15611350 15611391 LSU-rRNA_Hsa 1000 . +chr17 19355538 19356096 LSU-rRNA_Hsa 1000 . +chr17 19356672 19357097 LSU-rRNA_Hsa 1000 . +chr17 19501871 19509246 chrM 1000 . +chr17 21758658 21766005 ALR/Alpha 1000 . +chr17 21766609 21791933 ALR/Alpha 1000 . +chr17 22018520 22031841 chrM 1000 . +chr17 22157851 22167531 ALR/Alpha 1000 . +chr17 22171818 22190964 ALR/Alpha 1000 . +chr17 22218482 22218871 ALR/Alpha 1000 . +chr17 22221098 22225536 ALR/Alpha 1000 . +chr17 22229149 22239805 ALR/Alpha 1000 . +chr17 22241551 22263006 ALR/Alpha 1000 . +chr17 25263012 25268053 (GAGTG)n 1000 . +chr17 25475680 25479470 ALR/Alpha 1000 . +chr17 25486596 25487752 ALR/Alpha 1000 . +chr17 25489687 25508249 ALR/Alpha 1000 . +chr17 25509123 25510044 ALR/Alpha 1000 . +chr17 25516108 25524439 ALR/Alpha 1000 . +chr17 25525456 25525582 ALR/Alpha 1000 . +chr17 30919112 30919237 LSU-rRNA_Hsa 1000 . +chr17 32820399 32820532 LSU-rRNA_Hsa 1000 . +chr17 33478114 33478372 LSU-rRNA_Hsa 1000 . +chr17 38383641 38383708 LSU-rRNA_Hsa 1000 . +chr17 42673610 42673649 LSU-rRNA_Hsa 1000 . +chr17 51183093 51183746 chrM 1000 . +chr17 55868618 55868752 LSU-rRNA_Hsa 1000 . +chr17 58117390 58117829 LSU-rRNA_Hsa 1000 . +chr17 58603715 58603738 (GAGTG)n 1000 . +chr17 60502545 60502623 LSU-rRNA_Hsa 1000 . +chr17 61706867 61706923 LSU-rRNA_Hsa 1000 . +chr17 70863796 70863886 LSU-rRNA_Hsa 1000 . +chr17 71183663 71183713 LSU-rRNA_Hsa 1000 . +chr17 74962460 74962516 (GAGTG)n 1000 . +chr17 75158031 75158389 LSU-rRNA_Hsa 1000 . +chr17_gl000205_random 92545 97313 BSR/Beta 1000 . +chr17_gl000205_random 98126 101014 BSR/Beta 1000 . +chr17_gl000205_random 102264 104719 BSR/Beta 1000 . +chr18 10631 11145 TAR1 1000 . +chr18 96416 98320 TAR1 1000 . +chr18 105673 111670 BSR/Beta 1000 . +chr18 6688463 6688509 (GAATG)n 1000 . +chr18 14878925 14879395 TAR1 1000 . +chr18 14985081 14985532 TAR1 1000 . +chr18 15381634 15390839 ALR/Alpha 1000 . +chr18 15392051 15396662 ALR/Alpha 1000 . +chr18 15398545 15410898 ALR/Alpha 1000 . +chr18 18510901 18520342 ALR/Alpha 1000 . +chr18 19856796 19856861 LSU-rRNA_Hsa 1000 . +chr18 21191673 21191827 LSU-rRNA_Hsa 1000 . +chr18 28215535 28216153 TAR1 1000 . +chr18 29348701 29348779 LSU-rRNA_Hsa 1000 . +chr18 36530250 36530358 LSU-rRNA_Hsa 1000 . +chr18 42222802 42222858 (GAATG)n 1000 . +chr18 43516369 43516411 LSU-rRNA_Hsa 1000 . +chr18 44126235 44126593 (CATTC)n 1000 . +chr18 45379616 45379808 chrM 1000 . +chr18 48287957 48288132 LSU-rRNA_Hsa 1000 . +chr18 50319112 50319228 (CATTC)n 1000 . +chr18 58715935 58716021 LSU-rRNA_Hsa 1000 . +chr18 66773175 66773492 (GAGTG)n 1000 . +chr18 72244399 72244658 LSU-rRNA_Hsa 1000 . +chr18 75381961 75382782 (GAGTG)n 1000 . +chr18 77772846 77773065 LSU-rRNA_Hsa 1000 . +chr19 246006 247844 TAR1 1000 . +chr19 602098 602470 TAR1 1000 . +chr19 6784477 6784821 (CATTC)n 1000 . +chr19 6818825 6819389 ALR/Alpha 1000 . +chr19 9710522 9710587 (GAATG)n 1000 . +chr19 10778407 10778561 LSU-rRNA_Hsa 1000 . +chr19 21149902 21156284 BSR/Beta 1000 . +chr19 21668536 21669126 BSR/Beta 1000 . +chr19 21670503 21681650 BSR/Beta 1000 . +chr19 21776132 21780768 BSR/Beta 1000 . +chr19 22021715 22030630 BSR/Beta 1000 . +chr19 22031284 22034031 BSR/Beta 1000 . +chr19 22056990 22063052 BSR/Beta 1000 . +chr19 22073354 22076152 BSR/Beta 1000 . +chr19 22082897 22085835 BSR/Beta 1000 . +chr19 22088431 22094452 BSR/Beta 1000 . +chr19 22098015 22107067 BSR/Beta 1000 . +chr19 22109694 22119771 BSR/Beta 1000 . +chr19 22208494 22219477 BSR/Beta 1000 . +chr19 22222529 22233207 BSR/Beta 1000 . +chr19 22315737 22320704 BSR/Beta 1000 . +chr19 22421387 22429701 BSR/Beta 1000 . +chr19 22435249 22443618 BSR/Beta 1000 . +chr19 22505980 22507208 BSR/Beta 1000 . +chr19 22508167 22535119 BSR/Beta 1000 . +chr19 22877614 22877696 SSU-rRNA_Hsa 1000 . +chr19 22896519 22916751 BSR/Beta 1000 . +chr19 22917784 22921266 BSR/Beta 1000 . +chr19 22922171 22923411 BSR/Beta 1000 . +chr19 22991782 22993330 BSR/Beta 1000 . +chr19 22993858 23009540 BSR/Beta 1000 . +chr19 23097041 23103096 BSR/Beta 1000 . +chr19 23105382 23108071 BSR/Beta 1000 . +chr19 23111413 23113205 BSR/Beta 1000 . +chr19 23113931 23119694 BSR/Beta 1000 . +chr19 23197493 23208940 BSR/Beta 1000 . +chr19 23226065 23226473 BSR/Beta 1000 . +chr19 23227244 23240447 BSR/Beta 1000 . +chr19 23241092 23252259 BSR/Beta 1000 . +chr19 23277826 23286027 BSR/Beta 1000 . +chr19 23438232 23445010 BSR/Beta 1000 . +chr19 23445579 23447435 BSR/Beta 1000 . +chr19 23488972 23505312 BSR/Beta 1000 . +chr19 23582380 23586160 BSR/Beta 1000 . +chr19 23586925 23591085 BSR/Beta 1000 . +chr19 23640698 23647740 BSR/Beta 1000 . +chr19 23703016 23708250 BSR/Beta 1000 . +chr19 23711249 23714803 BSR/Beta 1000 . +chr19 23723471 23730305 BSR/Beta 1000 . +chr19 23741917 23743407 BSR/Beta 1000 . +chr19 23744116 23748687 BSR/Beta 1000 . +chr19 23843959 23844040 ALR/Alpha 1000 . +chr19 23871235 23871735 BSR/Beta 1000 . +chr19 23951704 23955845 BSR/Beta 1000 . +chr19 23956385 23963761 BSR/Beta 1000 . +chr19 23964461 23972510 BSR/Beta 1000 . +chr19 24071099 24073203 BSR/Beta 1000 . +chr19 24079258 24085253 BSR/Beta 1000 . +chr19 24088871 24091586 BSR/Beta 1000 . +chr19 24156856 24171961 BSR/Beta 1000 . +chr19 24177110 24177528 BSR/Beta 1000 . +chr19 24182398 24186210 LSU-rRNA_Hsa 1000 . +chr19 24232248 24245481 BSR/Beta 1000 . +chr19 24246057 24251805 BSR/Beta 1000 . +chr19 24252747 24258122 BSR/Beta 1000 . +chr19 24259189 24259273 BSR/Beta 1000 . +chr19 24364512 24376216 BSR/Beta 1000 . +chr19 24378506 24379044 BSR/Beta 1000 . +chr19 24380109 24380589 BSR/Beta 1000 . +chr19 24385266 24389522 ALR/Alpha 1000 . +chr19 24390267 24414448 ALR/Alpha 1000 . +chr19 24420194 24425467 ALR/Alpha 1000 . +chr19 24434627 24446571 ALR/Alpha 1000 . +chr19 24451435 24453033 ALR/Alpha 1000 . +chr19 24456349 24460158 ALR/Alpha 1000 . +chr19 24461199 24462693 ALR/Alpha 1000 . +chr19 24464078 24464163 ALR/Alpha 1000 . +chr19 24468723 24503687 ALR/Alpha 1000 . +chr19 24508779 24554192 ALR/Alpha 1000 . +chr19 24555289 24569467 ALR/Alpha 1000 . +chr19 24570415 24576837 ALR/Alpha 1000 . +chr19 24582745 24588722 ALR/Alpha 1000 . +chr19 24593794 24596534 ALR/Alpha 1000 . +chr19 24597742 24631782 ALR/Alpha 1000 . +chr19 27731784 27741731 ALR/Alpha 1000 . +chr19 27742736 27746305 ALR/Alpha 1000 . +chr19 27748824 27761717 ALR/Alpha 1000 . +chr19 27762309 27763512 ALR/Alpha 1000 . +chr19 27764105 27771450 ALR/Alpha 1000 . +chr19 27777322 27785188 ALR/Alpha 1000 . +chr19 27788393 27809047 ALR/Alpha 1000 . +chr19 27811897 27815269 ALR/Alpha 1000 . +chr19 27821250 27837359 ALR/Alpha 1000 . +chr19 27839078 27862032 ALR/Alpha 1000 . +chr19 27863903 27865511 ALR/Alpha 1000 . +chr19 27867130 27882975 ALR/Alpha 1000 . +chr19 27883876 27908755 ALR/Alpha 1000 . +chr19 27910366 27916929 ALR/Alpha 1000 . +chr19 27919374 27952095 ALR/Alpha 1000 . +chr19 27953868 27954416 ALR/Alpha 1000 . +chr19 27960649 27989877 ALR/Alpha 1000 . +chr19 27990542 27991847 ALR/Alpha 1000 . +chr19 27995483 28007089 ALR/Alpha 1000 . +chr19 28011031 28053279 ALR/Alpha 1000 . +chr19 28054131 28069589 ALR/Alpha 1000 . +chr19 28073185 28087417 ALR/Alpha 1000 . +chr19 28093944 28124921 ALR/Alpha 1000 . +chr19 28151640 28160539 ALR/Alpha 1000 . +chr19 28171632 28180402 ALR/Alpha 1000 . +chr19 28186125 28186344 ALR/Alpha 1000 . +chr19 28192496 28194360 ALR/Alpha 1000 . +chr19 28203119 28203145 ALR/Alpha 1000 . +chr19 28204218 28207180 ALR/Alpha 1000 . +chr19 28212100 28224185 ALR/Alpha 1000 . +chr19 36066505 36066749 LSU-rRNA_Hsa 1000 . +chr19 42069989 42071891 LSU-rRNA_Hsa 1000 . +chr19 43910305 43912167 LSU-rRNA_Hsa 1000 . +chr19 44914313 44916340 ACRO1 1000 . +chr19 44920428 44920573 ACRO1 1000 . +chr19 44956448 44957599 ACRO1 1000 . +chr19 44960681 44962681 ACRO1 1000 . +chr19 44977983 44978611 ACRO1 1000 . +chr19 45013962 45014966 (GAATG)n 1000 . +chr19 46539080 46539134 ALR/Alpha 1000 . +chr19 46735611 46736114 LSU-rRNA_Hsa 1000 . +chr19 48167131 48167152 (CATTC)n 1000 . +chr19 52286862 52286922 LSU-rRNA_Hsa 1000 . +chr19 52333773 52333826 LSU-rRNA_Hsa 1000 . +chr19 54158223 54158402 LSU-rRNA_Hsa 1000 . +chr19 58093132 58093265 LSU-rRNA_Hsa 1000 . +chr19 59117245 59118819 TAR1 1000 . +chr19_gl000208_random 0 24900 ALR/Alpha 1000 . +chr19_gl000208_random 27029 29810 ALR/Alpha 1000 . +chr19_gl000208_random 35903 57390 ALR/Alpha 1000 . +chr19_gl000208_random 63462 65268 ALR/Alpha 1000 . +chr19_gl000208_random 71306 92689 ALR/Alpha 1000 . +chr2 10585 12198 TAR1 1000 . +chr2 5677787 5677811 (CATTC)n 1000 . +chr2 5828636 5828659 (GAATG)n 1000 . +chr2 16174768 16174819 (GAGTG)n 1000 . +chr2 21585363 21585486 TAR1 1000 . +chr2 24587368 24587639 LSU-rRNA_Hsa 1000 . +chr2 32342390 32342531 LSU-rRNA_Hsa 1000 . +chr2 32439003 32439128 ALR/Alpha 1000 . +chr2 32754222 32754292 BSR/Beta 1000 . +chr2 33069210 33069275 SSU-rRNA_Hsa 1000 . +chr2 33078926 33079013 ALR/Alpha 1000 . +chr2 36082773 36082820 (GAATG)n 1000 . +chr2 37305250 37305308 SSU-rRNA_Hsa 1000 . +chr2 50815825 50816532 chrM 1000 . +chr2 54071030 54071113 LSU-rRNA_Hsa 1000 . +chr2 59830730 59830959 LSU-rRNA_Hsa 1000 . +chr2 61892492 61892559 LSU-rRNA_Hsa 1000 . +chr2 63435926 63436640 LSU-rRNA_Hsa 1000 . +chr2 65103096 65103154 LSU-rRNA_Hsa 1000 . +chr2 67356511 67356560 (GAATG)n 1000 . +chr2 70658547 70658729 ALR/Alpha 1000 . +chr2 78928721 78928992 LSU-rRNA_Hsa 1000 . +chr2 81893607 81893849 chrM 1000 . +chr2 83897670 83897776 (GAATG)n 1000 . +chr2 87575813 87576578 TAR1 1000 . +chr2 87792129 87792174 LSU-rRNA_Hsa 1000 . +chr2 88124408 88124884 chrM 1000 . +chr2 89830456 89847025 HSATII 1000 . +chr2 89848588 89879994 HSATII 1000 . +chr2 90283900 90284571 TAR1 1000 . +chr2 90371527 90394491 HSATII 1000 . +chr2 90527504 90528175 TAR1 1000 . +chr2 91595105 91615979 HSATII 1000 . +chr2 91750390 91751008 TAR1 1000 . +chr2 91847957 91848503 TAR1 1000 . +chr2 92045559 92045985 TAR1 1000 . +chr2 92267522 92326171 HSATII 1000 . +chr2 95564753 95565221 chrM 1000 . +chr2 98503281 98503408 ALR/Alpha 1000 . +chr2 98586445 98586465 (CATTC)n 1000 . +chr2 99089563 99089814 (GAGTG)n 1000 . +chr2 99208676 99208752 LSU-rRNA_Hsa 1000 . +chr2 105923699 105923781 TAR1 1000 . +chr2 106938817 106938879 TAR1 1000 . +chr2 109815786 109816307 (GAATG)n 1000 . +chr2 112215147 112215192 LSU-rRNA_Hsa 1000 . +chr2 114359553 114360257 TAR1 1000 . +chr2 114361054 114362417 TAR1 1000 . +chr2 115141355 115141500 ALR/Alpha 1000 . +chr2 115695017 115695281 LSU-rRNA_Hsa 1000 . +chr2 117778788 117783096 chrM 1000 . +chr2 117783710 117784077 chrM 1000 . +chr2 121391985 121392014 (CATTC)n 1000 . +chr2 121836197 121836528 SSU-rRNA_Hsa 1000 . +chr2 125435510 125435710 TAR1 1000 . +chr2 127587398 127587531 (GAATG)n 1000 . +chr2 128049143 128049865 LSU-rRNA_Hsa 1000 . +chr2 130000226 130001256 BSR/Beta 1000 . +chr2 132560214 132560696 TAR1 1000 . +chr2 132570742 132571233 TAR1 1000 . +chr2 132966374 132977849 ALR/Alpha 1000 . +chr2 132980437 132988895 ALR/Alpha 1000 . +chr2 132994855 133007983 ALR/Alpha 1000 . +chr2 133011919 133013768 SSU-rRNA_Hsa 1000 . +chr2 133036250 133040042 LSU-rRNA_Hsa 1000 . +chr2 133044095 133045945 ACRO1 1000 . +chr2 133109767 133110293 TAR1 1000 . +chr2 133419015 133419049 (CATTC)n 1000 . +chr2 144045713 144045806 BSR/Beta 1000 . +chr2 146930831 146930974 LSU-rRNA_Hsa 1000 . +chr2 149639294 149639426 chrM 1000 . +chr2 153118941 153118989 ALR/Alpha 1000 . +chr2 156119976 156121314 chrM 1000 . +chr2 156828439 156828484 ALR/Alpha 1000 . +chr2 159440391 159440797 LSU-rRNA_Hsa 1000 . +chr2 162138412 162138650 ACRO1 1000 . +chr2 167686824 167686850 (CATTC)n 1000 . +chr2 169389848 169389907 (GAATG)n 1000 . +chr2 170199912 170199999 LSU-rRNA_Hsa 1000 . +chr2 171009451 171009480 (CATTC)n 1000 . +chr2 176685028 176685072 (GAATG)n 1000 . +chr2 177707853 177707904 (GAATG)n 1000 . +chr2 184227353 184227390 (CATTC)n 1000 . +chr2 190484357 190484668 ALR/Alpha 1000 . +chr2 191402647 191402786 LSU-rRNA_Hsa 1000 . +chr2 193572610 193572734 BSR/Beta 1000 . +chr2 201124402 201124517 SSU-rRNA_Hsa 1000 . +chr2 203210988 203211097 LSU-rRNA_Hsa 1000 . +chr2 203478954 203482533 chrM 1000 . +chr2 203483338 203483497 chrM 1000 . +chr2 209435605 209435704 TAR1 1000 . +chr2 210437186 210437281 LSU-rRNA_Hsa 1000 . +chr2 212014594 212014719 LSU-rRNA_Hsa 1000 . +chr2 223100342 223100493 LSU-rRNA_Hsa 1000 . +chr2 225887043 225887126 SSU-rRNA_Hsa 1000 . +chr2 230015752 230015823 LSU-rRNA_Hsa 1000 . +chr2 230045487 230045734 LSU-rRNA_Hsa 1000 . +chr2 232110067 232110184 LSU-rRNA_Hsa 1000 . +chr2 237658692 237659176 TAR1 1000 . +chr2 238575619 238575657 ALR/Alpha 1000 . +chr2 239034408 239034457 (GAGTG)n 1000 . +chr2 241876066 241876247 BSR/Beta 1000 . +chr2 243152701 243154485 TAR1 1000 . +chr20 976849 976908 (CATTC)n 1000 . +chr20 6463211 6463308 (CATTC)n 1000 . +chr20 9142445 9142521 ALR/Alpha 1000 . +chr20 15240564 15240616 (GAATG)n 1000 . +chr20 17469657 17470083 LSU-rRNA_Hsa 1000 . +chr20 25946119 25956134 ALR/Alpha 1000 . +chr20 25960441 25964316 ALR/Alpha 1000 . +chr20 26258740 26270390 ALR/Alpha 1000 . +chr20 26271464 26281723 ALR/Alpha 1000 . +chr20 26285418 26319564 ALR/Alpha 1000 . +chr20 29496314 29498093 ALR/Alpha 1000 . +chr20 29498600 29506823 ALR/Alpha 1000 . +chr20 29511127 29514978 ALR/Alpha 1000 . +chr20 29803914 29833262 (GAATG)n 1000 . +chr20 45112773 45112879 LSU-rRNA_Hsa 1000 . +chr20 52730887 52731039 (GAGTG)n 1000 . +chr20 55932703 55936114 chrM 1000 . +chr20 60295507 60295684 (GAGTG)n 1000 . +chr20 61851635 61851871 (GAGTG)n 1000 . +chr20 62916548 62918052 TAR1 1000 . +chr21 9540843 9540912 TAR1 1000 . +chr21 9695023 9695279 ACRO1 1000 . +chr21 9697907 9700051 ACRO1 1000 . +chr21 9704217 9704882 TAR1 1000 . +chr21 9735550 9736035 chrM 1000 . +chr21 9827004 9827578 SSU-rRNA_Hsa 1000 . +chr21 9829743 9831446 ACRO1 1000 . +chr21 9881895 9882569 TAR1 1000 . +chr21 10084943 10087967 (GAATG)n 1000 . +chr21 10492882 10493042 chrM 1000 . +chr21 10599428 10599915 TAR1 1000 . +chr21 10697897 10707438 ALR/Alpha 1000 . +chr21 10708995 10736605 ALR/Alpha 1000 . +chr21 10742706 10766786 ALR/Alpha 1000 . +chr21 10772809 10829531 ALR/Alpha 1000 . +chr21 10830174 10860718 (GAATG)n 1000 . +chr21 14338135 14369453 ALR/Alpha 1000 . +chr21 14732279 14732796 TAR1 1000 . +chr21 15419447 15419509 (GAGTG)n 1000 . +chr21 15456972 15457585 LSU-rRNA_Hsa 1000 . +chr21 18800575 18800997 (GAGTG)n 1000 . +chr21 19374787 19374922 LSU-rRNA_Hsa 1000 . +chr21 26361325 26361498 (GAGTG)n 1000 . +chr21 27228058 27228147 SSU-rRNA_Hsa 1000 . +chr21 31154796 31155001 SSU-rRNA_Hsa 1000 . +chr21 31825573 31825620 (CATTC)n 1000 . +chr21 33402447 33402624 (CATTC)n 1000 . +chr21 34279597 34279698 LSU-rRNA_Hsa 1000 . +chr21 34695896 34696001 (GAATG)n 1000 . +chr21 38636344 38636412 LSU-rRNA_Hsa 1000 . +chr21 45128124 45128187 LSU-rRNA_Hsa 1000 . +chr21 45815548 45816634 (GAGTG)n 1000 . +chr21 47425787 47426344 TAR1 1000 . +chr21 48117714 48119753 TAR1 1000 . +chr22 16212334 16213340 ALR/Alpha 1000 . +chr22 16467717 16468269 TAR1 1000 . +chr22 16847854 16862475 HSATII 1000 . +chr22 16884200 16884626 TAR1 1000 . +chr22 17584554 17584736 (GAGTG)n 1000 . +chr22 18105844 18105904 LSU-rRNA_Hsa 1000 . +chr22 21265391 21265525 LSU-rRNA_Hsa 1000 . +chr22 22210544 22210856 LSU-rRNA_Hsa 1000 . +chr22 22488382 22494225 ALR/Alpha 1000 . +chr22 22652105 22652554 TAR1 1000 . +chr22 23697966 23698141 LSU-rRNA_Hsa 1000 . +chr22 27132842 27133017 (CATTC)n 1000 . +chr22 49519364 49519545 (CATTC)n 1000 . +chr22 49799400 49799557 BSR/Beta 1000 . +chr22 49996005 49996475 TAR1 1000 . +chr3 4951276 4951300 (GAATG)n 1000 . +chr3 5405276 5405310 (CATTC)n 1000 . +chr3 9175952 9176057 LSU-rRNA_Hsa 1000 . +chr3 15345124 15345190 LSU-rRNA_Hsa 1000 . +chr3 18271202 18271389 LSU-rRNA_Hsa 1000 . +chr3 22904996 22905109 LSU-rRNA_Hsa 1000 . +chr3 23768083 23768153 LSU-rRNA_Hsa 1000 . +chr3 24063078 24063140 LSU-rRNA_Hsa 1000 . +chr3 27889216 27889362 SSU-rRNA_Hsa 1000 . +chr3 40867945 40867977 (CATTC)n 1000 . +chr3 45494767 45494852 LSU-rRNA_Hsa 1000 . +chr3 49113651 49113955 LSU-rRNA_Hsa 1000 . +chr3 49987456 49987902 SSU-rRNA_Hsa 1000 . +chr3 57799850 57799910 LSU-rRNA_Hsa 1000 . +chr3 67884829 67884960 LSU-rRNA_Hsa 1000 . +chr3 75696297 75699304 BSR/Beta 1000 . +chr3 79159065 79159105 SSU-rRNA_Hsa 1000 . +chr3 80995858 81014459 ALR/Alpha 1000 . +chr3 81016223 81018591 ALR/Alpha 1000 . +chr3 84169349 84169453 LSU-rRNA_Hsa 1000 . +chr3 90311965 90313985 ALR/Alpha 1000 . +chr3 90317532 90327718 ALR/Alpha 1000 . +chr3 90331010 90356042 ALR/Alpha 1000 . +chr3 90364441 90369273 ALR/Alpha 1000 . +chr3 90370637 90383231 ALR/Alpha 1000 . +chr3 90389288 90418526 ALR/Alpha 1000 . +chr3 90426256 90431620 ALR/Alpha 1000 . +chr3 90437601 90468228 ALR/Alpha 1000 . +chr3 90470685 90479807 ALR/Alpha 1000 . +chr3 90485831 90504853 ALR/Alpha 1000 . +chr3 93504854 93508033 ALR/Alpha 1000 . +chr3 93510329 93518959 ALR/Alpha 1000 . +chr3 96336031 96337354 chrM 1000 . +chr3 96485099 96485435 TAR1 1000 . +chr3 96751319 96751879 BSR/Beta 1000 . +chr3 99676577 99676903 ALR/Alpha 1000 . +chr3 108250093 108250368 LSU-rRNA_Hsa 1000 . +chr3 117985769 117985855 LSU-rRNA_Hsa 1000 . +chr3 119248242 119248323 LSU-rRNA_Hsa 1000 . +chr3 122734688 122734816 LSU-rRNA_Hsa 1000 . +chr3 125374455 125388784 ALR/Alpha 1000 . +chr3 131136687 131136842 SSU-rRNA_Hsa 1000 . +chr3 136703597 136703623 (GAATG)n 1000 . +chr3 138428412 138428491 SSU-rRNA_Hsa 1000 . +chr3 138801287 138801365 LSU-rRNA_Hsa 1000 . +chr3 141772469 141772534 LSU-rRNA_Hsa 1000 . +chr3 141773744 141774230 LSU-rRNA_Hsa 1000 . +chr3 142384658 142384747 LSU-rRNA_Hsa 1000 . +chr3 148368424 148368544 LSU-rRNA_Hsa 1000 . +chr3 158700751 158700798 LSU-rRNA_Hsa 1000 . +chr3 160146210 160146313 LSU-rRNA_Hsa 1000 . +chr3 163618889 163618919 (GAGTG)n 1000 . +chr3 172988180 172988329 TAR1 1000 . +chr3 173846978 173847080 LSU-rRNA_Hsa 1000 . +chr3 179250823 179250992 ALR/Alpha 1000 . +chr3 179497343 179497506 LSU-rRNA_Hsa 1000 . +chr3 186823114 186823351 ALR/Alpha 1000 . +chr3 187111270 187111382 TAR1 1000 . +chr3 195903749 195903797 LSU-rRNA_Hsa 1000 . +chr3 196625624 196625775 HSATII 1000 . +chr4 10193 12822 TAR1 1000 . +chr4 258729 258861 TAR1 1000 . +chr4 430248 430375 TAR1 1000 . +chr4 471740 471973 TAR1 1000 . +chr4 7584186 7584364 LSU-rRNA_Hsa 1000 . +chr4 7921125 7921336 ALR/Alpha 1000 . +chr4 8343771 8344366 ALR/Alpha 1000 . +chr4 10563335 10563458 LSU-rRNA_Hsa 1000 . +chr4 12276463 12292424 ALR/Alpha 1000 . +chr4 12641917 12642259 chrM 1000 . +chr4 16732811 16732882 (GAATG)n 1000 . +chr4 17063503 17063787 chrM 1000 . +chr4 21536593 21536688 (CATTC)n 1000 . +chr4 21583630 21583719 (GAATG)n 1000 . +chr4 27732045 27732197 chrM 1000 . +chr4 40763106 40763128 (GAATG)n 1000 . +chr4 42585633 42585726 SSU-rRNA_Hsa 1000 . +chr4 49085565 49158605 ALR/Alpha 1000 . +chr4 49276938 49277574 TAR1 1000 . +chr4 49281430 49283324 ACRO1 1000 . +chr4 49287476 49289346 ACRO1 1000 . +chr4 49293512 49295509 ACRO1 1000 . +chr4 49299664 49301664 ACRO1 1000 . +chr4 49305800 49307944 ACRO1 1000 . +chr4 49311765 49313618 ACRO1 1000 . +chr4 49317761 49319799 ACRO1 1000 . +chr4 49323927 49326820 ACRO1 1000 . +chr4 49330972 49332866 ACRO1 1000 . +chr4 49336720 49337356 TAR1 1000 . +chr4 49515584 49517874 ACRO1 1000 . +chr4 49521734 49522370 TAR1 1000 . +chr4 49633314 49660115 (GAATG)n 1000 . +chr4 52660118 52683402 ALR/Alpha 1000 . +chr4 52686086 52688890 ALR/Alpha 1000 . +chr4 54814133 54814288 ALR/Alpha 1000 . +chr4 58128931 58128985 (CATTC)n 1000 . +chr4 59720637 59720809 ALR/Alpha 1000 . +chr4 64193734 64199244 ALR/Alpha 1000 . +chr4 64205457 64210679 ALR/Alpha 1000 . +chr4 64211768 64214334 ALR/Alpha 1000 . +chr4 68264218 68266806 ALR/Alpha 1000 . +chr4 70296581 70296753 LSU-rRNA_Hsa 1000 . +chr4 71257039 71257109 (GAATG)n 1000 . +chr4 76807175 76807697 LSU-rRNA_Hsa 1000 . +chr4 77437020 77437175 LSU-rRNA_Hsa 1000 . +chr4 78129557 78129888 LSU-rRNA_Hsa 1000 . +chr4 78133450 78133550 LSU-rRNA_Hsa 1000 . +chr4 78410602 78410710 ALR/Alpha 1000 . +chr4 78929675 78929915 chrM 1000 . +chr4 80796959 80797039 SSU-rRNA_Hsa 1000 . +chr4 86968241 86968396 LSU-rRNA_Hsa 1000 . +chr4 93622978 93623681 chrM 1000 . +chr4 104282780 104283094 TAR1 1000 . +chr4 107924382 107924904 LSU-rRNA_Hsa 1000 . +chr4 112411956 112412162 ALR/Alpha 1000 . +chr4 117220913 117221002 LSU-rRNA_Hsa 1000 . +chr4 120158524 120158690 LSU-rRNA_Hsa 1000 . +chr4 124462854 124462883 (CATTC)n 1000 . +chr4 134082914 134083021 LSU-rRNA_Hsa 1000 . +chr4 134709997 134710456 LSU-rRNA_Hsa 1000 . +chr4 136497845 136497937 ALR/Alpha 1000 . +chr4 142170087 142170224 LSU-rRNA_Hsa 1000 . +chr4 150417016 150417184 SSU-rRNA_Hsa 1000 . +chr4 150769069 150769301 LSU-rRNA_Hsa 1000 . +chr4 154159754 154159919 SSU-rRNA_Hsa 1000 . +chr4 155350335 155350399 LSU-rRNA_Hsa 1000 . +chr4 156372795 156373927 chrM 1000 . +chr4 156374749 156377226 chrM 1000 . +chr4 156377740 156387619 chrM 1000 . +chr4 162202915 162202997 SSU-rRNA_Hsa 1000 . +chr4 163342518 163342693 chrM 1000 . +chr4 167063724 167064663 LSU-rRNA_Hsa 1000 . +chr4 186445806 186445833 (CATTC)n 1000 . +chr4 191040918 191043602 TAR1 1000 . +chr4_gl000194_random 28288 28962 TAR1 1000 . +chr5 11942 13334 TAR1 1000 . +chr5 1403582 1403674 (CATTC)n 1000 . +chr5 3353029 3353158 LSU-rRNA_Hsa 1000 . +chr5 3637262 3639428 TAR1 1000 . +chr5 10374041 10375088 SSU-rRNA_Hsa 1000 . +chr5 10376635 10377147 SSU-rRNA_Hsa 1000 . +chr5 12327555 12327881 TAR1 1000 . +chr5 23885563 23892154 ALR/Alpha 1000 . +chr5 23893589 23905706 ALR/Alpha 1000 . +chr5 34038377 34038545 LSU-rRNA_Hsa 1000 . +chr5 34862059 34862232 LSU-rRNA_Hsa 1000 . +chr5 41357103 41357192 SSU-rRNA_Hsa 1000 . +chr5 45908649 45914960 ALR/Alpha 1000 . +chr5 45916462 45921873 ALR/Alpha 1000 . +chr5 45927178 45931159 ALR/Alpha 1000 . +chr5 45933503 45937718 ALR/Alpha 1000 . +chr5 45939296 45939727 ALR/Alpha 1000 . +chr5 45940458 45970684 ALR/Alpha 1000 . +chr5 45971264 45972900 ALR/Alpha 1000 . +chr5 45974036 45977482 ALR/Alpha 1000 . +chr5 45978554 45979789 ALR/Alpha 1000 . +chr5 45982496 46000158 ALR/Alpha 1000 . +chr5 46010002 46030628 ALR/Alpha 1000 . +chr5 46032702 46045540 ALR/Alpha 1000 . +chr5 46047497 46096238 ALR/Alpha 1000 . +chr5 46118514 46129053 ALR/Alpha 1000 . +chr5 46137101 46151957 ALR/Alpha 1000 . +chr5 46152536 46156403 ALR/Alpha 1000 . +chr5 46160599 46171255 ALR/Alpha 1000 . +chr5 46172653 46193526 ALR/Alpha 1000 . +chr5 46199549 46270545 ALR/Alpha 1000 . +chr5 46271462 46313558 ALR/Alpha 1000 . +chr5 46318478 46341726 ALR/Alpha 1000 . +chr5 46343190 46371474 ALR/Alpha 1000 . +chr5 46377492 46385346 ALR/Alpha 1000 . +chr5 46391343 46405638 ALR/Alpha 1000 . +chr5 49405641 49441620 ALR/Alpha 1000 . +chr5 49447717 49451978 ALR/Alpha 1000 . +chr5 49457142 49458698 ALR/Alpha 1000 . +chr5 49459949 49464624 ALR/Alpha 1000 . +chr5 49470803 49517758 ALR/Alpha 1000 . +chr5 49520122 49525928 ALR/Alpha 1000 . +chr5 49529010 49549920 ALR/Alpha 1000 . +chr5 49550656 49552785 ALR/Alpha 1000 . +chr5 49558962 49559604 ALR/Alpha 1000 . +chr5 51813679 51813758 LSU-rRNA_Hsa 1000 . +chr5 52768689 52768745 LSU-rRNA_Hsa 1000 . +chr5 58202627 58202654 (GAATG)n 1000 . +chr5 62720353 62720644 TAR1 1000 . +chr5 65424883 65425229 LSU-rRNA_Hsa 1000 . +chr5 71146744 71146942 LSU-rRNA_Hsa 1000 . +chr5 71655441 71655574 BSR/Beta 1000 . +chr5 79945840 79948187 chrM 1000 . +chr5 93903160 93906623 chrM 1000 . +chr5 96724874 96725068 LSU-rRNA_Hsa 1000 . +chr5 99381641 99390749 chrM 1000 . +chr5 103062073 103062216 LSU-rRNA_Hsa 1000 . +chr5 105889063 105889223 chrM 1000 . +chr5 122990601 122991048 LSU-rRNA_Hsa 1000 . +chr5 123095972 123097432 chrM 1000 . +chr5 134258998 134264217 chrM 1000 . +chr5 142688919 142689105 ALR/Alpha 1000 . +chr5 145935545 145935667 LSU-rRNA_Hsa 1000 . +chr5 150043001 150043066 (GAGTG)n 1000 . +chr5 154788122 154788360 LSU-rRNA_Hsa 1000 . +chr5 156626891 156627060 LSU-rRNA_Hsa 1000 . +chr5 157408607 157408653 (CATTC)n 1000 . +chr5 160467063 160467633 ALR/Alpha 1000 . +chr5 160590080 160590193 ALR/Alpha 1000 . +chr5 165794509 165794561 BSR/Beta 1000 . +chr5 174541742 174542177 SSU-rRNA_Hsa 1000 . +chr5 179608470 179608499 (GAGTG)n 1000 . +chr6 147986 149365 TAR1 1000 . +chr6 4684152 4684272 (GAATG)n 1000 . +chr6 5146113 5146139 (CATTC)n 1000 . +chr6 15035318 15035391 LSU-rRNA_Hsa 1000 . +chr6 16425488 16425551 LSU-rRNA_Hsa 1000 . +chr6 22691316 22691455 LSU-rRNA_Hsa 1000 . +chr6 22948193 22948350 LSU-rRNA_Hsa 1000 . +chr6 23008011 23008100 LSU-rRNA_Hsa 1000 . +chr6 23009068 23009147 LSU-rRNA_Hsa 1000 . +chr6 26263863 26263995 SSU-rRNA_Hsa 1000 . +chr6 26264599 26264681 SSU-rRNA_Hsa 1000 . +chr6 28169811 28169873 LSU-rRNA_Hsa 1000 . +chr6 29729916 29730463 LSU-rRNA_Hsa 1000 . +chr6 31193056 31193095 SSU-rRNA_Hsa 1000 . +chr6 31443154 31443337 LSU-rRNA_Hsa 1000 . +chr6 34547858 34547990 ALR/Alpha 1000 . +chr6 36532459 36532538 SSU-rRNA_Hsa 1000 . +chr6 37354366 37354568 LSU-rRNA_Hsa 1000 . +chr6 38879368 38879397 (GAATG)n 1000 . +chr6 41510157 41510177 (GAGTG)n 1000 . +chr6 41711766 41711819 (GAATG)n 1000 . +chr6 46081707 46081803 TAR1 1000 . +chr6 50980611 50980737 LSU-rRNA_Hsa 1000 . +chr6 51238612 51238637 (GAGTG)n 1000 . +chr6 54856040 54856167 ALR/Alpha 1000 . +chr6 57242547 57242846 ALR/Alpha 1000 . +chr6 58730235 58734241 ALR/Alpha 1000 . +chr6 58735355 58738973 ALR/Alpha 1000 . +chr6 58745986 58770976 ALR/Alpha 1000 . +chr6 58772538 58780161 ALR/Alpha 1000 . +chr6 61880167 61931603 ALR/Alpha 1000 . +chr6 61932242 61943454 ALR/Alpha 1000 . +chr6 61950455 61954075 ALR/Alpha 1000 . +chr6 61955198 61959215 ALR/Alpha 1000 . +chr6 62178590 62186033 ALR/Alpha 1000 . +chr6 62186881 62188899 ALR/Alpha 1000 . +chr6 62189892 62206612 ALR/Alpha 1000 . +chr6 62207809 62230644 ALR/Alpha 1000 . +chr6 62284017 62284534 chrM 1000 . +chr6 67654499 67654585 LSU-rRNA_Hsa 1000 . +chr6 70183071 70183129 LSU-rRNA_Hsa 1000 . +chr6 71878485 71878517 (GAATG)n 1000 . +chr6 74016137 74016190 LSU-rRNA_Hsa 1000 . +chr6 74185646 74185803 LSU-rRNA_Hsa 1000 . +chr6 74877801 74877856 LSU-rRNA_Hsa 1000 . +chr6 82260695 82260757 LSU-rRNA_Hsa 1000 . +chr6 84992858 84992930 SSU-rRNA_Hsa 1000 . +chr6 99658410 99658437 (GAATG)n 1000 . +chr6 100029095 100029165 LSU-rRNA_Hsa 1000 . +chr6 104610547 104610573 (CATTC)n 1000 . +chr6 105771976 105772035 LSU-rRNA_Hsa 1000 . +chr6 105967763 105967826 LSU-rRNA_Hsa 1000 . +chr6 114254697 114254754 (CATTC)n 1000 . +chr6 114472446 114472714 LSU-rRNA_Hsa 1000 . +chr6 117545476 117545833 TAR1 1000 . +chr6 120583441 120583547 LSU-rRNA_Hsa 1000 . +chr6 120727693 120728034 TAR1 1000 . +chr6 124493437 124493496 (GAATG)n 1000 . +chr6 133593944 133594166 LSU-rRNA_Hsa 1000 . +chr6 134995780 134996047 LSU-rRNA_Hsa 1000 . +chr6 137059142 137059226 SSU-rRNA_Hsa 1000 . +chr6 137334258 137334300 (CATTC)n 1000 . +chr6 137358722 137358834 LSU-rRNA_Hsa 1000 . +chr6 141772829 141772899 (GAATG)n 1000 . +chr6 144692027 144692284 LSU-rRNA_Hsa 1000 . +chr6 150665153 150665281 SSU-rRNA_Hsa 1000 . +chr6 152157980 152158256 SSU-rRNA_Hsa 1000 . +chr6 157893515 157893542 (GAGTG)n 1000 . +chr6 169014276 169016452 TAR1 1000 . +chr6 170919493 170919609 TAR1 1000 . +chr6_apd_hap1 1033560 1034108 LSU-rRNA_Hsa 1000 . +chr6_cox_hap2 1246022 1246134 LSU-rRNA_Hsa 1000 . +chr6_cox_hap2 2707816 2707855 SSU-rRNA_Hsa 1000 . +chr6_dbb_hap3 1030728 1031276 LSU-rRNA_Hsa 1000 . +chr6_dbb_hap3 2490183 2490222 SSU-rRNA_Hsa 1000 . +chr6_mann_hap4 1030358 1030906 LSU-rRNA_Hsa 1000 . +chr6_mann_hap4 2541448 2541487 SSU-rRNA_Hsa 1000 . +chr6_mcf_hap5 1030394 1030506 LSU-rRNA_Hsa 1000 . +chr6_mcf_hap5 2575098 2575137 SSU-rRNA_Hsa 1000 . +chr6_qbl_hap6 1030713 1031261 LSU-rRNA_Hsa 1000 . +chr6_qbl_hap6 2488966 2489005 SSU-rRNA_Hsa 1000 . +chr6_ssto_hap7 1067592 1068140 LSU-rRNA_Hsa 1000 . +chr6_ssto_hap7 2528009 2528048 SSU-rRNA_Hsa 1000 . +chr6_ssto_hap7 2773921 2774104 LSU-rRNA_Hsa 1000 . +chr7 1558892 1559215 ALR/Alpha 1000 . +chr7 3025176 3025266 LSU-rRNA_Hsa 1000 . +chr7 27553378 27553502 LSU-rRNA_Hsa 1000 . +chr7 33123223 33123327 LSU-rRNA_Hsa 1000 . +chr7 36606004 36606101 LSU-rRNA_Hsa 1000 . +chr7 39429578 39429606 (CATTC)n 1000 . +chr7 43878355 43878530 TAR1 1000 . +chr7 45208535 45208555 (CATTC)n 1000 . +chr7 45291569 45291726 chrM 1000 . +chr7 48503344 48503446 (GAATG)n 1000 . +chr7 56679105 56685730 BSR/Beta 1000 . +chr7 56726325 56728085 BSR/Beta 1000 . +chr7 56728753 56737434 BSR/Beta 1000 . +chr7 57205319 57210318 BSR/Beta 1000 . +chr7 57545692 57556823 (GAATG)n 1000 . +chr7 57811514 57820304 ALR/Alpha 1000 . +chr7 57824612 57828485 ALR/Alpha 1000 . +chr7 57939315 58001851 ALR/Alpha 1000 . +chr7 58006115 58022007 ALR/Alpha 1000 . +chr7 58026331 58054326 ALR/Alpha 1000 . +chr7 61054334 61055887 HSATII 1000 . +chr7 61079028 61085907 ALR/Alpha 1000 . +chr7 61087753 61248355 ALR/Alpha 1000 . +chr7 61250833 61290672 ALR/Alpha 1000 . +chr7 61294120 61304139 ALR/Alpha 1000 . +chr7 61307488 61310511 ALR/Alpha 1000 . +chr7 61361613 61362146 ALR/Alpha 1000 . +chr7 61364202 61375111 ALR/Alpha 1000 . +chr7 61377582 61417405 ALR/Alpha 1000 . +chr7 61420850 61430697 ALR/Alpha 1000 . +chr7 61434041 61459495 ALR/Alpha 1000 . +chr7 61460020 61460465 ALR/Alpha 1000 . +chr7 61510467 61525376 ALR/Alpha 1000 . +chr7 61528676 61531671 ALR/Alpha 1000 . +chr7 61534875 61560797 ALR/Alpha 1000 . +chr7 61561322 61586778 ALR/Alpha 1000 . +chr7 61590126 61600145 ALR/Alpha 1000 . +chr7 61603605 61643429 ALR/Alpha 1000 . +chr7 61645900 61656808 ALR/Alpha 1000 . +chr7 61658864 61659397 ALR/Alpha 1000 . +chr7 61739560 61759399 (GAATG)n 1000 . +chr7 61779527 61803114 (GAATG)n 1000 . +chr7 61845691 61898240 ALR/Alpha 1000 . +chr7 61902994 61917157 ALR/Alpha 1000 . +chr7 61967159 62010012 ALR/Alpha 1000 . +chr7 62014418 62030067 ALR/Alpha 1000 . +chr7 62031164 62047971 ALR/Alpha 1000 . +chr7 62049315 62054339 ALR/Alpha 1000 . +chr7 62055874 62059486 ALR/Alpha 1000 . +chr7 62061083 62062814 ALR/Alpha 1000 . +chr7 62066698 62067882 ALR/Alpha 1000 . +chr7 62068904 62077078 ALR/Alpha 1000 . +chr7 62077603 62079573 ALR/Alpha 1000 . +chr7 62080589 62099669 ALR/Alpha 1000 . +chr7 62103307 62127240 ALR/Alpha 1000 . +chr7 62133407 62156047 ALR/Alpha 1000 . +chr7 62157745 62181400 ALR/Alpha 1000 . +chr7 62182390 62188977 ALR/Alpha 1000 . +chr7 62189619 62196444 ALR/Alpha 1000 . +chr7 62203300 62260528 ALR/Alpha 1000 . +chr7 62261334 62319285 ALR/Alpha 1000 . +chr7 62325304 62360768 ALR/Alpha 1000 . +chr7 62365854 62369229 ALR/Alpha 1000 . +chr7 62375367 62402052 ALR/Alpha 1000 . +chr7 62402771 62409492 ALR/Alpha 1000 . +chr7 62412943 62431079 ALR/Alpha 1000 . +chr7 62432563 62436894 ALR/Alpha 1000 . +chr7 62437880 62446647 ALR/Alpha 1000 . +chr7 62447717 62452850 ALR/Alpha 1000 . +chr7 63484955 63492257 BSR/Beta 1000 . +chr7 63686197 63693336 BSR/Beta 1000 . +chr7 63699195 63704200 BSR/Beta 1000 . +chr7 63742029 63761971 BSR/Beta 1000 . +chr7 63828588 63841231 BSR/Beta 1000 . +chr7 63842296 63844735 BSR/Beta 1000 . +chr7 63852570 63862101 ALR/Alpha 1000 . +chr7 64059157 64066183 BSR/Beta 1000 . +chr7 64066715 64078443 BSR/Beta 1000 . +chr7 64086631 64089459 BSR/Beta 1000 . +chr7 64090864 64105357 BSR/Beta 1000 . +chr7 64108988 64112711 BSR/Beta 1000 . +chr7 64113305 64120263 BSR/Beta 1000 . +chr7 64951358 64955699 ALR/Alpha 1000 . +chr7 67786741 67786790 LSU-rRNA_Hsa 1000 . +chr7 68527370 68527788 LSU-rRNA_Hsa 1000 . +chr7 74077260 74077313 LSU-rRNA_Hsa 1000 . +chr7 78431778 78431885 LSU-rRNA_Hsa 1000 . +chr7 80905339 80905409 LSU-rRNA_Hsa 1000 . +chr7 80962907 80963147 SSU-rRNA_Hsa 1000 . +chr7 92436067 92436103 LSU-rRNA_Hsa 1000 . +chr7 94872503 94872587 LSU-rRNA_Hsa 1000 . +chr7 99065859 99066207 LSU-rRNA_Hsa 1000 . +chr7 101965496 101965608 LSU-rRNA_Hsa 1000 . +chr7 104630544 104630760 LSU-rRNA_Hsa 1000 . +chr7 104641782 104641866 LSU-rRNA_Hsa 1000 . +chr7 104966297 104966532 LSU-rRNA_Hsa 1000 . +chr7 111773982 111774022 (GAATG)n 1000 . +chr7 128118087 128118179 LSU-rRNA_Hsa 1000 . +chr7 131817322 131817359 (CATTC)n 1000 . +chr7 134078899 134078969 (CATTC)n 1000 . +chr7 134081364 134081419 (CATTC)n 1000 . +chr7 135862193 135862300 LSU-rRNA_Hsa 1000 . +chr7 137553221 137553264 (CATTC)n 1000 . +chr7 141501207 141505275 chrM 1000 . +chr7 142373032 142375525 chrM 1000 . +chr7 143151113 143151226 LSU-rRNA_Hsa 1000 . +chr7 157898645 157898802 (CATTC)n 1000 . +chr7 158316344 158317261 (GAGTG)n 1000 . +chr7 159127937 159128431 TAR1 1000 . +chr7_gl000195_random 13719 20424 BSR/Beta 1000 . +chr7_gl000195_random 21395 26145 BSR/Beta 1000 . +chr8 155512 157639 TAR1 1000 . +chr8 179377 179693 TAR1 1000 . +chr8 6713360 6713391 (GAATG)n 1000 . +chr8 16026435 16026485 (CATTC)n 1000 . +chr8 17574664 17574842 SSU-rRNA_Hsa 1000 . +chr8 19712054 19712530 LSU-rRNA_Hsa 1000 . +chr8 19934640 19934742 LSU-rRNA_Hsa 1000 . +chr8 21455971 21456306 LSU-rRNA_Hsa 1000 . +chr8 29360846 29360883 LSU-rRNA_Hsa 1000 . +chr8 32870877 32871051 LSU-rRNA_Hsa 1000 . +chr8 43427379 43480443 ALR/Alpha 1000 . +chr8 43481686 43501947 ALR/Alpha 1000 . +chr8 43504513 43527880 ALR/Alpha 1000 . +chr8 43529737 43532898 ALR/Alpha 1000 . +chr8 43533706 43541788 ALR/Alpha 1000 . +chr8 43543866 43549157 ALR/Alpha 1000 . +chr8 43557730 43559882 ALR/Alpha 1000 . +chr8 43564169 43575603 ALR/Alpha 1000 . +chr8 43576172 43580404 ALR/Alpha 1000 . +chr8 43581450 43594681 ALR/Alpha 1000 . +chr8 43595649 43602817 ALR/Alpha 1000 . +chr8 43604156 43720040 ALR/Alpha 1000 . +chr8 43724506 43737632 ALR/Alpha 1000 . +chr8 43741936 43747703 ALR/Alpha 1000 . +chr8 43754548 43756715 ALR/Alpha 1000 . +chr8 43759675 43767062 ALR/Alpha 1000 . +chr8 43767945 43777549 ALR/Alpha 1000 . +chr8 43778765 43791707 ALR/Alpha 1000 . +chr8 43792440 43813846 ALR/Alpha 1000 . +chr8 43816163 43838878 ALR/Alpha 1000 . +chr8 46838890 46877553 ALR/Alpha 1000 . +chr8 46879873 46891619 ALR/Alpha 1000 . +chr8 46897769 46911726 ALR/Alpha 1000 . +chr8 46913869 46922182 ALR/Alpha 1000 . +chr8 46951570 46952182 LSU-rRNA_Hsa 1000 . +chr8 46956279 47000409 ALR/Alpha 1000 . +chr8 47001674 47002619 ALR/Alpha 1000 . +chr8 47007167 47009008 ALR/Alpha 1000 . +chr8 47064679 47084772 ALR/Alpha 1000 . +chr8 47199446 47222012 ALR/Alpha 1000 . +chr8 47223932 47237442 ALR/Alpha 1000 . +chr8 47255753 47260245 ALR/Alpha 1000 . +chr8 47263155 47284920 ALR/Alpha 1000 . +chr8 47303423 47312726 ALR/Alpha 1000 . +chr8 47360768 47367129 ALR/Alpha 1000 . +chr8 47368146 47395144 ALR/Alpha 1000 . +chr8 47402991 47426980 ALR/Alpha 1000 . +chr8 47428211 47445306 ALR/Alpha 1000 . +chr8 47445876 47456344 ALR/Alpha 1000 . +chr8 47545982 47559215 BSR/Beta 1000 . +chr8 47560034 47563106 BSR/Beta 1000 . +chr8 47689357 47693303 BSR/Beta 1000 . +chr8 47725534 47742672 BSR/Beta 1000 . +chr8 47750844 47776101 BSR/Beta 1000 . +chr8 47786025 47788155 BSR/Beta 1000 . +chr8 47792900 47804990 BSR/Beta 1000 . +chr8 47914601 47915432 BSR/Beta 1000 . +chr8 48996677 48997379 ACRO1 1000 . +chr8 49375956 49376033 LSU-rRNA_Hsa 1000 . +chr8 51022251 51022334 TAR1 1000 . +chr8 55887281 55887323 SSU-rRNA_Hsa 1000 . +chr8 56755032 56755341 LSU-rRNA_Hsa 1000 . +chr8 56821653 56822036 LSU-rRNA_Hsa 1000 . +chr8 63367483 63367699 LSU-rRNA_Hsa 1000 . +chr8 69218440 69218922 LSU-rRNA_Hsa 1000 . +chr8 70602248 70602620 LSU-rRNA_Hsa 1000 . +chr8 76461797 76461836 ALR/Alpha 1000 . +chr8 77280360 77280468 LSU-rRNA_Hsa 1000 . +chr8 81069080 81069151 (GAGTG)n 1000 . +chr8 97184367 97184453 (GAATG)n 1000 . +chr8 98577733 98577938 LSU-rRNA_Hsa 1000 . +chr8 102550179 102550322 LSU-rRNA_Hsa 1000 . +chr8 103491489 103491536 LSU-rRNA_Hsa 1000 . +chr8 107310812 107310853 (GAATG)n 1000 . +chr8 109304591 109304662 LSU-rRNA_Hsa 1000 . +chr8 117627764 117627808 (GAATG)n 1000 . +chr8 128176730 128176820 (GAATG)n 1000 . +chr8 133876822 133876922 ALR/Alpha 1000 . +chr8 135451766 135452413 (GAATG)n 1000 . +chr8 136094776 136094813 (CATTC)n 1000 . +chr8 136563499 136563534 (CATTC)n 1000 . +chr8 140690398 140690510 LSU-rRNA_Hsa 1000 . +chr9 10435 11574 TAR1 1000 . +chr9 1212195 1212358 SSU-rRNA_Hsa 1000 . +chr9 1515397 1515501 TAR1 1000 . +chr9 4691651 4691745 LSU-rRNA_Hsa 1000 . +chr9 4799734 4800000 SSU-rRNA_Hsa 1000 . +chr9 7622268 7622335 LSU-rRNA_Hsa 1000 . +chr9 17001117 17001241 LSU-rRNA_Hsa 1000 . +chr9 19278552 19278593 LSU-rRNA_Hsa 1000 . +chr9 19492825 19492988 LSU-rRNA_Hsa 1000 . +chr9 20846586 20846762 LSU-rRNA_Hsa 1000 . +chr9 26081081 26081194 LSU-rRNA_Hsa 1000 . +chr9 28260562 28260626 LSU-rRNA_Hsa 1000 . +chr9 32537938 32538167 SSU-rRNA_Hsa 1000 . +chr9 33219984 33220031 LSU-rRNA_Hsa 1000 . +chr9 33655900 33655951 chrM 1000 . +chr9 33656632 33659128 chrM 1000 . +chr9 42253530 42254022 TAR1 1000 . +chr9 42805766 42806343 TAR1 1000 . +chr9 42819035 42819738 ALR/Alpha 1000 . +chr9 42821615 42832136 ALR/Alpha 1000 . +chr9 44312957 44313421 TAR1 1000 . +chr9 44334614 44335020 TAR1 1000 . +chr9 44883372 44887272 ALR/Alpha 1000 . +chr9 44891559 44899778 ALR/Alpha 1000 . +chr9 44900284 44902030 ALR/Alpha 1000 . +chr9 45357015 45357629 TAR1 1000 . +chr9 45439530 45440022 TAR1 1000 . +chr9 46754850 46755225 TAR1 1000 . +chr9 46776448 46776912 TAR1 1000 . +chr9 66494170 66494805 TAR1 1000 . +chr9 66767878 66826625 ALR/Alpha 1000 . +chr9 66832948 66836542 ALR/Alpha 1000 . +chr9 66839599 66858048 ALR/Alpha 1000 . +chr9 66957764 66958254 TAR1 1000 . +chr9 66970955 66992580 ALR/Alpha 1000 . +chr9 66994456 67005145 ALR/Alpha 1000 . +chr9 67315242 67320975 ALR/Alpha 1000 . +chr9 67340080 67340661 TAR1 1000 . +chr9 68301474 68301966 TAR1 1000 . +chr9 68376841 68377466 TAR1 1000 . +chr9 69677196 69687885 ALR/Alpha 1000 . +chr9 69689764 69711386 ALR/Alpha 1000 . +chr9 69724086 69724616 TAR1 1000 . +chr9 69948085 70010538 ALR/Alpha 1000 . +chr9 70063576 70074266 ALR/Alpha 1000 . +chr9 70076143 70076846 ALR/Alpha 1000 . +chr9 70090050 70090119 TAR1 1000 . +chr9 70318729 70325007 ALR/Alpha 1000 . +chr9 70326887 70327587 ALR/Alpha 1000 . +chr9 70340787 70340856 TAR1 1000 . +chr9 70648394 70648886 TAR1 1000 . +chr9 72653081 72653554 (GAATG)n 1000 . +chr9 78790112 78790255 (GAATG)n 1000 . +chr9 79186648 79186950 LSU-rRNA_Hsa 1000 . +chr9 79845944 79846006 TAR1 1000 . +chr9 84036635 84036721 SSU-rRNA_Hsa 1000 . +chr9 92086494 92086861 TAR1 1000 . +chr9 106052412 106052732 LSU-rRNA_Hsa 1000 . +chr9 107045875 107045950 LSU-rRNA_Hsa 1000 . +chr9 110269932 110270961 BSR/Beta 1000 . +chr9 113335180 113335207 (CATTC)n 1000 . +chr9 113823993 113824152 LSU-rRNA_Hsa 1000 . +chr9 119124293 119124333 (GAATG)n 1000 . +chr9 119706052 119706117 (CATTC)n 1000 . +chr9 126813737 126813813 LSU-rRNA_Hsa 1000 . +chr9 131431165 131431227 LSU-rRNA_Hsa 1000 . +chr9 138276898 138277074 (GAATG)n 1000 . +chr9 138362322 138362381 LSU-rRNA_Hsa 1000 . +chr9 138473755 138473841 (GAGTG)n 1000 . +chr9 140687334 140687522 LSU-rRNA_Hsa 1000 . +chr9 141019938 141021783 TAR1 1000 . +chr9_gl000198_random 2 57251 ALR/Alpha 1000 . +chr9_gl000199_random 9991 25681 ALR/Alpha 1000 . +chr9_gl000199_random 28712 169872 ALR/Alpha 1000 . +chrM 2591 2747 LSU-rRNA_Hsa 1000 . +chrUn_gl000211 48087 49047 TAR1 1000 . +chrUn_gl000211 79456 79946 chrM 1000 . +chrUn_gl000214 112894 113462 TAR1 1000 . +chrUn_gl000214 117559 119556 ACRO1 1000 . +chrUn_gl000214 123669 125854 ACRO1 1000 . +chrUn_gl000214 129952 131846 ACRO1 1000 . +chrUn_gl000214 136013 137568 ACRO1 1000 . +chrUn_gl000216 2 83010 (CATTC)n 1000 . +chrUn_gl000216 132151 138522 BSR/Beta 1000 . +chrUn_gl000216 140865 156080 BSR/Beta 1000 . +chrUn_gl000216 157173 166242 BSR/Beta 1000 . +chrUn_gl000216 168111 170757 BSR/Beta 1000 . +chrUn_gl000216 171613 172292 BSR/Beta 1000 . +chrUn_gl000217 52959 53424 TAR1 1000 . +chrUn_gl000218 17030 17520 chrM 1000 . +chrUn_gl000219 27294 30313 BSR/Beta 1000 . +chrUn_gl000220 95180 96145 LSU-rRNA_Hsa 1000 . +chrUn_gl000220 99158 99197 LSU-rRNA_Hsa 1000 . +chrUn_gl000220 109077 110946 SSU-rRNA_Hsa 1000 . +chrUn_gl000220 113347 118417 LSU-rRNA_Hsa 1000 . +chrUn_gl000220 153049 154918 SSU-rRNA_Hsa 1000 . +chrUn_gl000220 157319 161802 LSU-rRNA_Hsa 1000 . +chrUn_gl000222 103478 106485 BSR/Beta 1000 . +chrUn_gl000224 188 444 ACRO1 1000 . +chrUn_gl000224 4596 6740 ACRO1 1000 . +chrUn_gl000224 10924 13068 ACRO1 1000 . +chrUn_gl000224 17233 19377 ACRO1 1000 . +chrUn_gl000225 2 683 BSR/Beta 1000 . +chrUn_gl000225 2569 7594 BSR/Beta 1000 . +chrUn_gl000225 10353 22564 BSR/Beta 1000 . +chrUn_gl000225 23781 29581 BSR/Beta 1000 . +chrUn_gl000225 32021 35565 BSR/Beta 1000 . +chrUn_gl000225 38322 42006 BSR/Beta 1000 . +chrUn_gl000225 44770 52041 BSR/Beta 1000 . +chrUn_gl000225 54801 57306 BSR/Beta 1000 . +chrUn_gl000225 60053 62971 BSR/Beta 1000 . +chrUn_gl000225 65736 71261 BSR/Beta 1000 . +chrUn_gl000225 74013 78086 BSR/Beta 1000 . +chrUn_gl000225 80855 88550 BSR/Beta 1000 . +chrUn_gl000225 91311 100107 BSR/Beta 1000 . +chrUn_gl000225 100962 103609 BSR/Beta 1000 . +chrUn_gl000225 105482 114692 BSR/Beta 1000 . +chrUn_gl000225 115785 135104 BSR/Beta 1000 . +chrUn_gl000225 137443 144679 BSR/Beta 1000 . +chrUn_gl000225 189230 200638 (GAATG)n 1000 . +chrUn_gl000226 1 15004 ALR/Alpha 1000 . +chrUn_gl000227 74072 75453 TAR1 1000 . +chrUn_gl000228 114592 121067 BSR/Beta 1000 . +chrUn_gl000229 18170 19913 SSU-rRNA_Hsa 1000 . +chrUn_gl000232 25009 25186 BSR/Beta 1000 . +chrUn_gl000234 11995 12162 BSR/Beta 1000 . +chrUn_gl000235 0 990 BSR/Beta 1000 . +chrUn_gl000243 16455 16711 ACRO1 1000 . +chrUn_gl000243 19343 21487 ACRO1 1000 . +chrUn_gl000243 25674 26368 TAR1 1000 . +chrX 363470 363613 ALR/Alpha 1000 . +chrX 13591996 13592054 LSU-rRNA_Hsa 1000 . +chrX 13593757 13593957 LSU-rRNA_Hsa 1000 . +chrX 16352365 16352903 SSU-rRNA_Hsa 1000 . +chrX 20119399 20119656 ALR/Alpha 1000 . +chrX 21098328 21098418 (GAATG)n 1000 . +chrX 24048271 24048302 (GAATG)n 1000 . +chrX 29094727 29094752 (CATTC)n 1000 . +chrX 30909185 30909341 LSU-rRNA_Hsa 1000 . +chrX 31360125 31360150 (CATTC)n 1000 . +chrX 32611588 32611734 SSU-rRNA_Hsa 1000 . +chrX 32627652 32627685 (GAATG)n 1000 . +chrX 34234074 34234164 SSU-rRNA_Hsa 1000 . +chrX 35530130 35530254 LSU-rRNA_Hsa 1000 . +chrX 36704893 36705099 (CATTC)n 1000 . +chrX 47175511 47175577 LSU-rRNA_Hsa 1000 . +chrX 47749438 47749802 LSU-rRNA_Hsa 1000 . +chrX 51147840 51148038 (CATTC)n 1000 . +chrX 54403620 54403690 LSU-rRNA_Hsa 1000 . +chrX 55204685 55210460 chrM 1000 . +chrX 58087952 58090095 ALR/Alpha 1000 . +chrX 58090902 58091754 ALR/Alpha 1000 . +chrX 58092738 58105085 ALR/Alpha 1000 . +chrX 58120784 58123930 ALR/Alpha 1000 . +chrX 58172283 58176781 ALR/Alpha 1000 . +chrX 58180601 58185903 ALR/Alpha 1000 . +chrX 58187995 58212105 ALR/Alpha 1000 . +chrX 58243116 58245313 ALR/Alpha 1000 . +chrX 58246413 58249087 ALR/Alpha 1000 . +chrX 58319184 58351744 ALR/Alpha 1000 . +chrX 58354020 58423193 ALR/Alpha 1000 . +chrX 58428312 58471301 ALR/Alpha 1000 . +chrX 58472199 58479732 ALR/Alpha 1000 . +chrX 58482787 58494519 ALR/Alpha 1000 . +chrX 58495732 58504237 ALR/Alpha 1000 . +chrX 58506070 58536795 ALR/Alpha 1000 . +chrX 58544095 58582011 ALR/Alpha 1000 . +chrX 61682014 61736573 ALR/Alpha 1000 . +chrX 61742599 61774906 ALR/Alpha 1000 . +chrX 61781937 61789741 ALR/Alpha 1000 . +chrX 61791413 61861625 ALR/Alpha 1000 . +chrX 61862764 61876945 ALR/Alpha 1000 . +chrX 61880574 61927096 ALR/Alpha 1000 . +chrX 61936569 61959547 ALR/Alpha 1000 . +chrX 61967845 61973104 ALR/Alpha 1000 . +chrX 61979195 61998594 ALR/Alpha 1000 . +chrX 62000097 62000700 ALR/Alpha 1000 . +chrX 62003205 62041193 ALR/Alpha 1000 . +chrX 62045228 62045843 ALR/Alpha 1000 . +chrX 65455718 65455743 (GAATG)n 1000 . +chrX 73769987 73770249 TAR1 1000 . +chrX 83965410 83965765 TAR1 1000 . +chrX 88083253 88083341 LSU-rRNA_Hsa 1000 . +chrX 88735757 88735943 LSU-rRNA_Hsa 1000 . +chrX 93459339 93459489 TAR1 1000 . +chrX 93643706 93643985 TAR1 1000 . +chrX 96772866 96773262 LSU-rRNA_Hsa 1000 . +chrX 97829455 97829623 TAR1 1000 . +chrX 97836751 97837045 TAR1 1000 . +chrX 108297348 108297830 LSU-rRNA_Hsa 1000 . +chrX 115521101 115521246 LSU-rRNA_Hsa 1000 . +chrX 117333911 117334190 SSU-rRNA_Hsa 1000 . +chrX 125605686 125607267 chrM 1000 . +chrX 130224031 130224313 (GAGTG)n 1000 . +chrX 133660310 133660450 LSU-rRNA_Hsa 1000 . +chrX 134108836 134108891 LSU-rRNA_Hsa 1000 . +chrX 139858392 139858607 LSU-rRNA_Hsa 1000 . +chrX 155258261 155259779 TAR1 1000 . +chrY 313470 313613 ALR/Alpha 1000 . +chrY 3004989 3005175 LSU-rRNA_Hsa 1000 . +chrY 7671817 7694928 BSR/Beta 1000 . +chrY 7726064 7730229 BSR/Beta 1000 . +chrY 7730734 7731598 BSR/Beta 1000 . +chrY 7735811 7752887 BSR/Beta 1000 . +chrY 7785067 7806311 BSR/Beta 1000 . +chrY 7806856 7814704 BSR/Beta 1000 . +chrY 7815230 7820478 BSR/Beta 1000 . +chrY 7829937 7832032 BSR/Beta 1000 . +chrY 7832744 7848695 BSR/Beta 1000 . +chrY 7870343 7873582 BSR/Beta 1000 . +chrY 7874115 7874584 BSR/Beta 1000 . +chrY 7875409 7885257 BSR/Beta 1000 . +chrY 7886545 7894591 BSR/Beta 1000 . +chrY 7898927 7916812 BSR/Beta 1000 . +chrY 7918790 7921352 BSR/Beta 1000 . +chrY 7926344 7936705 BSR/Beta 1000 . +chrY 7941130 7947438 BSR/Beta 1000 . +chrY 7948790 7964448 BSR/Beta 1000 . +chrY 8179010 8181143 BSR/Beta 1000 . +chrY 8181757 8213330 BSR/Beta 1000 . +chrY 8214629 8215637 BSR/Beta 1000 . +chrY 8220421 8230061 BSR/Beta 1000 . +chrY 8230686 8231546 BSR/Beta 1000 . +chrY 8240772 8265916 BSR/Beta 1000 . +chrY 8291535 8292942 BSR/Beta 1000 . +chrY 8294002 8295175 BSR/Beta 1000 . +chrY 8296944 8321375 BSR/Beta 1000 . +chrY 8325813 8325929 BSR/Beta 1000 . +chrY 8326678 8333466 BSR/Beta 1000 . +chrY 8334027 8342387 BSR/Beta 1000 . +chrY 8356544 8369346 BSR/Beta 1000 . +chrY 8909560 8909925 TAR1 1000 . +chrY 9072781 9072993 TAR1 1000 . +chrY 9908434 9925428 ALR/Alpha 1000 . +chrY 9981952 9982126 BSR/Beta 1000 . +chrY 10034864 10036712 SSU-rRNA_Hsa 1000 . +chrY 10040627 10045657 ALR/Alpha 1000 . +chrY 10047773 10052533 ALR/Alpha 1000 . +chrY 10053695 10057722 ALR/Alpha 1000 . +chrY 10059394 10073694 ALR/Alpha 1000 . +chrY 10075082 10075781 ALR/Alpha 1000 . +chrY 10080736 10104539 ALR/Alpha 1000 . +chrY 13104556 13143946 ALR/Alpha 1000 . +chrY 13193984 13196531 (CATTC)n 1000 . +chrY 13258830 13259399 TAR1 1000 . +chrY 13290177 13290667 chrM 1000 . +chrY 13446524 13451585 (CATTC)n 1000 . +chrY 13452332 13461798 (CATTC)n 1000 . +chrY 13464558 13469801 BSR/Beta 1000 . +chrY 13472564 13476448 BSR/Beta 1000 . +chrY 13479203 13487223 BSR/Beta 1000 . +chrY 13489984 13490110 BSR/Beta 1000 . +chrY 13642278 13748576 HSATII 1000 . +chrY 13798588 13870229 (GAATG)n 1000 . +chrY 19691913 19692524 LSU-rRNA_Hsa 1000 . +chrY 19764063 19776198 ALR/Alpha 1000 . +chrY 19780600 19781704 ALR/Alpha 1000 . +chrY 19783669 19796396 ALR/Alpha 1000 . +chrY 19800068 19801419 ALR/Alpha 1000 . +chrY 19808085 19817100 ALR/Alpha 1000 . +chrY 19944298 19944581 TAR1 1000 . +chrY 20235195 20235478 TAR1 1000 . +chrY 20362679 20371694 ALR/Alpha 1000 . +chrY 20378360 20379711 ALR/Alpha 1000 . +chrY 20383383 20396110 ALR/Alpha 1000 . +chrY 20398075 20399179 ALR/Alpha 1000 . +chrY 20403581 20415713 ALR/Alpha 1000 . +chrY 20487248 20487859 LSU-rRNA_Hsa 1000 . +chrY 23124788 23125577 BSR/Beta 1000 . +chrY 23149027 23151205 BSR/Beta 1000 . +chrY 23157969 23158245 BSR/Beta 1000 . +chrY 23159001 23167737 BSR/Beta 1000 . +chrY 23178886 23181770 BSR/Beta 1000 . +chrY 23220740 23223625 BSR/Beta 1000 . +chrY 23234125 23235822 BSR/Beta 1000 . +chrY 23236898 23248080 BSR/Beta 1000 . +chrY 23248729 23248851 BSR/Beta 1000 . +chrY 23899295 23899388 TAR1 1000 . +chrY 23956449 23956628 TAR1 1000 . +chrY 24247659 24247700 TAR1 1000 . +chrY 24630999 24631040 TAR1 1000 . +chrY 24953159 24975657 BSR/Beta 1000 . +chrY 24980997 24991235 BSR/Beta 1000 . +chrY 25022753 25039185 BSR/Beta 1000 . +chrY 25040153 25042421 BSR/Beta 1000 . +chrY 25048332 25059258 BSR/Beta 1000 . +chrY 25060235 25064798 BSR/Beta 1000 . +chrY 25099139 25121882 BSR/Beta 1000 . +chrY 25122419 25160800 BSR/Beta 1000 . +chrY 25182404 25192372 BSR/Beta 1000 . +chrY 25217722 25219409 BSR/Beta 1000 . +chrY 25493588 25495275 BSR/Beta 1000 . +chrY 26148315 26148450 TAR1 1000 . +chrY 26586905 26609405 BSR/Beta 1000 . +chrY 26614745 26624983 BSR/Beta 1000 . +chrY 26656502 26672934 BSR/Beta 1000 . +chrY 26673902 26676170 BSR/Beta 1000 . +chrY 26682081 26693007 BSR/Beta 1000 . +chrY 26693984 26698547 BSR/Beta 1000 . +chrY 26732883 26755623 BSR/Beta 1000 . +chrY 26756160 26794538 BSR/Beta 1000 . +chrY 26816148 26826116 BSR/Beta 1000 . +chrY 26851466 26853153 BSR/Beta 1000 . +chrY 27109247 27110934 BSR/Beta 1000 . +chrY 27136281 27146249 BSR/Beta 1000 . +chrY 27167859 27206241 BSR/Beta 1000 . +chrY 27206778 27229502 BSR/Beta 1000 . +chrY 27263848 27268411 BSR/Beta 1000 . +chrY 27269388 27280315 BSR/Beta 1000 . +chrY 27286226 27288494 BSR/Beta 1000 . +chrY 27289462 27305895 BSR/Beta 1000 . +chrY 27337415 27347656 BSR/Beta 1000 . +chrY 27352996 27375497 BSR/Beta 1000 . +chrY 27813984 27814119 TAR1 1000 . +chrY 28555026 28555353 TAR1 1000 . +chrY 28784131 28819345 (GAATG)n 1000 . +chrY 58819367 58917648 (CATTC)n 1000 . +chrY 58971913 58997782 (CATTC)n 1000 . +chrY 59361267 59362785 TAR1 1000 . +chr1 564449 570371 High_Mappability_island 1000 . +chr1 724136 727043 Satellite_repeat 1000 . +chr1 825006 825115 BSR/Beta 1000 . +chr1 2583334 2634374 Low_mappability_island 1000 . +chr1 4363064 4363242 (CATTC)n 1000 . +chr1 5725866 5736651 Low_mappability_island 1000 . +chr1 16839923 16841396 Low_mappability_island 1000 . +chr1 38077347 38077423 Low_mappability_island 1000 . +chr1 91852785 91853147 LSU-rRNA_Hsa 1000 . +chr1 104163724 104163860 Low_mappability_island 1000 . +chr1 108112972 108113707 LSU-rRNA_Hsa 1000 . +chr1 121351474 121487059 centromeric_repeat 1000 . +chr1 142535434 142543081 Satellite_repeat 1000 . +chr1 142723256 142723968 Low_mappability_island 1000 . +chr1 142792613 142793303 Low_mappability_island 1000 . +chr1 142835822 142837333 Low_mappability_island 1000 . +chr1 143274490 143284340 centromeric_repeat 1000 . +chr1 145277108 145277572 LSU-rRNA_Hsa 1000 . +chr1 149033183 149035829 Satellite_repeat 1000 . +chr1 156186169 156186712 High_Mappability_island 1000 . +chr1 224199390 224204260 Satellite_repeat 1000 . +chr1 233318467 233318516 (CATTC)n 1000 . +chr1 236260366 236260821 Low_mappability_island 1000 . +chr1 237766308 237766764 LSU-rRNA_Hsa 1000 . +chr1 238105345 238105511 Low_mappability_island 1000 . +chr1 238108025 238108378 Low_mappability_island 1000 . +chr1 238108645 238109697 Low_mappability_island 1000 . +chr10 18841533 18862467 (CATTC)n 1000 . +chr10 20035661 20037171 Low_mappability_island 1000 . +chr10 36722282 36723650 Low_mappability_island 1000 . +chr10 38772277 38819357 Satellite_repeat 1000 . +chr10 38868892 38889025 Satellite_repeat 1000 . +chr10 39076515 39155771 Satellite_repeat 1000 . +chr10 42354835 42548642 centromeric_repeat 1000 . +chr10 42596676 42602082 Satellite_repeat 1000 . +chr10 42596700 42602110 Satellite_repeat 1000 . +chr10 42661264 42667623 Satellite_repeat 1000 . +chr10 42790522 42818398 Satellite_repeat 1000 . +chr10 135498649 135502716 Satellite_repeat 1000 . +chr11 6831669 6831838 ALR/Alpha 1000 . +chr11 10529403 10531969 Low_mappability_island 1000 . +chr11 48671444 48902406 centromeric_repeat 1000 . +chr11 48931242 48964015 centromeric_repeat 1000 . +chr11 50318471 50784078 centromeric_repeat 1000 . +chr11 51090700 51374066 centromeric_repeat 1000 . +chr11 51567242 51594226 centromeric_repeat 1000 . +chr11 54694046 55027975 centromeric_repeat 1000 . +chr11 73221660 73221946 Low_mappability_island 1000 . +chr11 85194913 85195322 LSU-rRNA_Hsa 1000 . +chr11 87524468 87525005 Low_mappability_island 1000 . +chr11 103275584 103281729 Low_mappability_island 1000 . +chr11 122874287 122874443 Low_mappability_island 1000 . +chr12 20704285 20704583 SSU-rRNA_Hsa 1000 . +chr12 34372315 34372825 LSU-rRNA_Hsa 1000 . +chr12 34432130 34857010 centromeric_repeat 1000 . +chr12 37989447 38441828 centromeric_repeat 1000 . +chr12 38531376 38531930 LSU-rRNA_Hsa 1000 . +chr12 41757383 41757545 Low_mappability_island 1000 . +chr12 127650407 127651075 LSU-rRNA_Hsa 1000 . +chr12 132061320 132062046 Low_mappability_island 1000 . +chr13 56545728 56545925 Low_mappability_island 1000 . +chr13 110076444 110076782 Low_mappability_island 1000 . +chr14 18999935 19056900 centromeric_repeat 1000 . +chr14 32953263 32954381 Low_mappability_island 1000 . +chr14 84637832 84639038 Low_mappability_island 1000 . +chr14 90341302 90341516 SSU-rRNA_Hsa 1000 . +chr15 19999941 20044132 centromeric_repeat 1000 . +chr16 32493036 32570826 ALR/Alpha 1000 . +chr16 32590063 32598801 ALR/Alpha 1000 . +chr16 33237130 33241330 Low_mappability_island 1000 . +chr16 33864355 34023306 centromeric_repeat 1000 . +chr16 34180542 34197081 Satellite_repeat 1000 . +chr16 34530115 34542632 BSR/Beta 1000 . +chr16 35193580 35285885 centromeric_repeat 1000 . +chr16 46385718 46456668 Satellite_repeat 1000 . +chr16 46497639 46500515 Satellite_repeat 1000 . +chr16 47538629 47539297 LSU-rRNA_Hsa 1000 . +chr17 19355538 19356096 LSU-rRNA_Hsa 1000 . +chr17 19502495 19506773 Low_mappability_island 1000 . +chr17 21905167 21906712 centromeric_repeat 1000 . +chr17 22018524 22032049 Low_mappability_island 1000 . +chr17 22221073 22263006 centromeric_repeat 1000 . +chr17 25263010 25268059 Satellite_repeat 1000 . +chr17 25415551 25417559 telomeric_repeat 1000 . +chr17 31149365 31149981 High_Mappability_island 1000 . +chr17 33478114 33478372 LSU-rRNA_Hsa 1000 . +chr17 41381502 41382591 High_Mappability_island 1000 . +chr17 41463538 41464075 High_Mappability_island 1000 . +chr17 41464478 41465015 snRNA 1000 . +chr17 41465562 41467288 High_Mappability_island 1000 . +chr17 51183038 51183763 Low_mappability_island 1000 . +chr17 55868618 55868752 LSU-rRNA_Hsa 1000 . +chr17 75158031 75158430 LSU-rRNA_Hsa 1000 . +chr18 96416 97552 Satellite_repeat 1000 . +chr18 105658 112233 Satellite_repeat 1000 . +chr18 2842252 2842356 Low_mappability_island 1000 . +chr18 15393801 15393992 centromeric_repeat 1000 . +chr18 18510894 18520356 centromeric_repeat 1000 . +chr18 44126235 44126593 (CATTC)n 1000 . +chr18 45379603 45379864 Low_mappability_island 1000 . +chr18 50319086 50319301 Low_mappability_island 1000 . +chr18 77772846 77773065 LSU-rRNA_Hsa 1000 . +chr19 246006 247844 TAR1 1000 . +chr19 22877614 22877696 SSU-rRNA_Hsa 1000 . +chr19 23235030 23235504 BSR/Beta 1000 . +chr19 24182398 24186210 LSU-rRNA_Hsa 1000 . +chr19 24385474 24633168 centromeric_repeat 1000 . +chr19 27730611 28262682 centromeric_repeat 1000 . +chr19 36066445 36066810 LSU-rRNA_Hsa 1000 . +chr19 36756398 36800948 centromeric_repeat 1000 . +chr19 37759473 37797722 centromeric_repeat 1000 . +chr19 44914313 44916340 ACRO1 1000 . +chr19 44960681 44962681 ACRO1 1000 . +chr2 739925 740994 Low_mappability_island 1000 . +chr2 49456729 49457067 Low_mappability_island 1000 . +chr2 88124390 88124903 Low_mappability_island 1000 . +chr2 89830421 89880514 Satellite_repeat 1000 . +chr2 90371401 90394776 Satellite_repeat 1000 . +chr2 90443001 90545431 Low_mappability_island 1000 . +chr2 91595080 91616015 Satellite_repeat 1000 . +chr2 92267428 92326280 centromeric_repeat 1000 . +chr2 115695017 115695281 LSU-rRNA_Hsa 1000 . +chr2 117781085 117781300 Low_mappability_island 1000 . +chr2 132966248 132989300 centromeric_repeat 1000 . +chr2 132994855 133007983 ALR/Alpha 1000 . +chr2 133011824 133013298 SSU-rRNA_Hsa 1000 . +chr2 133036250 133040042 LSU-rRNA_Hsa 1000 . +chr2 133044095 133045945 ACRO1 1000 . +chr2 143848503 143848792 Low_mappability_island 1000 . +chr2 148022736 148022878 Low_mappability_island 1000 . +chr2 149639207 149639515 Low_mappability_island 1000 . +chr2 156120500 156120610 Low_mappability_island 1000 . +chr2 162135000 162139241 Low_mappability_island 1000 . +chr2 230045426 230045796 LSU-rRNA_Hsa 1000 . +chr20 26257032 26320267 centromeric_repeat 1000 . +chr20 29517710 29521147 centromeric_repeat 1000 . +chr20 29803876 29833334 centromeric_repeat 1000 . +chr20 55932703 55936114 chrM 1000 . +chr20 62916702 62918053 telomeric_repeat 1000 . +chr21 9647205 9648529 Low_mappability_island 1000 . +chr21 9694896 9704962 centromeric_repeat 1000 . +chr21 9825451 9827612 High_Mappability_island 1000 . +chr21 9827612 9845233 Low_mappability_island 1000 . +chr21 9881895 9882569 TAR1 1000 . +chr21 10084922 10088004 Satellite_repeat 1000 . +chr21 10492876 10493049 Low_mappability_island 1000 . +chr21 10599428 10599915 TAR1 1000 . +chr21 10697886 10860890 centromeric_repeat 1000 . +chr21 11186054 11188131 Satellite_repeat 1000 . +chr21 14338127 14369791 centromeric_repeat 1000 . +chr21 18800575 18800997 (GAGTG)n 1000 . +chr21 27228003 27228242 SSU-rRNA_Hsa 1000 . +chr21 46796081 46796336 Low_mappability_island 1000 . +chr22 16847814 16862659 Satellite_repeat 1000 . +chr22 18876789 18884510 Satellite_repeat 1000 . +chr3 25508897 25509131 Low_mappability_island 1000 . +chr3 73159606 73161131 snRNA 1000 . +chr3 75696297 75699304 BSR/Beta 1000 . +chr3 75717841 75720426 Satellite_repeat 1000 . +chr3 80995858 81014459 ALR/Alpha 1000 . +chr3 90311686 90507410 centromeric_repeat 1000 . +chr3 93504815 93519133 centromeric_repeat 1000 . +chr3 96335934 96337436 Low_mappability_island 1000 . +chr3 160665423 160665642 Low_mappability_island 1000 . +chr3 196625514 196625860 Satellite_repeat 1000 . +chr3 197825427 197834080 Low_mappability_island 1000 . +chr4 9987 12694 telomeric_repeat 1000 . +chr4 12276463 12292424 ALR/Alpha 1000 . +chr4 12641862 12642305 Low_mappability_island 1000 . +chr4 21583630 21583719 (GAATG)n 1000 . +chr4 27732004 27732240 Low_mappability_island 1000 . +chr4 47774268 47774416 Low_mappability_island 1000 . +chr4 49085372 49342114 centromeric_repeat 1000 . +chr4 49488472 49662085 centromeric_repeat 1000 . +chr4 52659961 52688986 centromeric_repeat 1000 . +chr4 56194229 56194584 Low_mappability_island 1000 . +chr4 65473858 65473941 Low_mappability_island 1000 . +chr4 68264186 68266830 centromeric_repeat 1000 . +chr4 70296565 70296841 LSU-rRNA_Hsa 1000 . +chr4 76807083 76807320 LSU-rRNA_Hsa 1000 . +chr4 78929660 78929920 Low_mappability_island 1000 . +chr4 156374749 156377226 chrM 1000 . +chr4 156384860 156387314 Low_mappability_island 1000 . +chr4 163342479 163342744 Low_mappability_island 1000 . +chr4 190190746 190203442 Low_mappability_island 1000 . +chr4 190801869 190802909 Low_mappability_island 1000 . +chr4 190943802 190943962 Satellite_repeat 1000 . +chr4 190987268 190990949 Satellite_repeat 1000 . +chr4 191026302 191044344 telomeric_repeat 1000 . +chr5 17517177 17600940 Low_mappability_island 1000 . +chr5 21477365 21497415 Low_mappability_island 1000 . +chr5 34177882 34197574 Low_mappability_island 1000 . +chr5 45908253 46411114 centromeric_repeat 1000 . +chr5 49405493 49554574 centromeric_repeat 1000 . +chr5 71146650 71146996 LSU-rRNA_Hsa 1000 . +chr5 79945807 79948223 Low_mappability_island 1000 . +chr5 93903068 93906726 Low_mappability_island 1000 . +chr5 97746525 97746679 Low_mappability_island 1000 . +chr5 99381556 99390873 Low_mappability_island 1000 . +chr5 105889063 105889263 chrM 1000 . +chr5 123095972 123097432 chrM 1000 . +chr5 134258949 134264271 Low_mappability_island 1000 . +chr5 174541634 174542177 SSU-rRNA_Hsa 1000 . +chr6 58735349 58739031 centromeric_repeat 1000 . +chr6 58745955 58780547 centromeric_repeat 1000 . +chr6 61880095 61944008 centromeric_repeat 1000 . +chr6 62189892 62206612 ALR/Alpha 1000 . +chr6 62207809 62230644 ALR/Alpha 1000 . +chr6 62283966 62284581 Low_mappability_island 1000 . +chr6 133593944 133594201 LSU-rRNA_Hsa 1000 . +chr6 137059142 137059326 SSU-rRNA_Hsa 1000 . +chr6 150665074 150665281 SSU-rRNA_Hsa 1000 . +chr6 157731310 157735525 Low_mappability_island 1000 . +chr7 43878355 43878530 TAR1 1000 . +chr7 45291517 45291740 Low_mappability_island 1000 . +chr7 56437808 56442977 Low_mappability_island 1000 . +chr7 57253980 57254183 Low_mappability_island 1000 . +chr7 57255310 57255444 Low_mappability_island 1000 . +chr7 57261829 57261998 Low_mappability_island 1000 . +chr7 57544726 57556913 Satellite_repeat 1000 . +chr7 57811488 57836990 centromeric_repeat 1000 . +chr7 57939184 58055539 centromeric_repeat 1000 . +chr7 61054285 62454680 centromeric_repeat 1000 . +chr7 64059157 64066183 BSR/Beta 1000 . +chr7 64951348 64956223 centromeric_repeat 1000 . +chr7 68201468 68201673 Low_mappability_island 1000 . +chr7 68527370 68527788 LSU-rRNA_Hsa 1000 . +chr7 80962907 80963147 SSU-rRNA_Hsa 1000 . +chr7 100550640 100551321 Low_mappability_island 1000 . +chr7 142372972 142375638 Low_mappability_island 1000 . +chr7 145694403 145694561 Low_mappability_island 1000 . +chr8 155512 157639 TAR1 1000 . +chr8 21455971 21456306 LSU-rRNA_Hsa 1000 . +chr8 32868966 32873279 Low_mappability_island 1000 . +chr8 43092737 43097573 Satellite_repeat 1000 . +chr8 43399486 43843604 centromeric_repeat 1000 . +chr8 46838215 47457541 centromeric_repeat 1000 . +chr8 47739043 47742797 Low_mappability_island 1000 . +chr8 47750844 47776101 BSR/Beta 1000 . +chr8 56754955 56755418 LSU-rRNA_Hsa 1000 . +chr8 69218401 69218922 LSU-rRNA_Hsa 1000 . +chr8 70602248 70602620 LSU-rRNA_Hsa 1000 . +chr8 77114154 77114389 Low_mappability_island 1000 . +chr8 100508010 100508287 Low_mappability_island 1000 . +chr9 10435 11574 TAR1 1000 . +chr9 4799734 4800000 SSU-rRNA_Hsa 1000 . +chr9 33656606 33659249 Low_mappability_island 1000 . +chr9 42819021 42832395 centromeric_repeat 1000 . +chr9 44070617 44070871 Low_mappability_island 1000 . +chr9 44873123 44902307 centromeric_repeat 1000 . +chr9 45355954 45357644 telomeric_repeat 1000 . +chr9 45435109 45443517 centromeric_repeat 1000 . +chr9 66494170 66494805 TAR1 1000 . +chr9 66767710 66864329 centromeric_repeat 1000 . +chr9 66970914 67005594 centromeric_repeat 1000 . +chr9 67315122 67321036 centromeric_repeat 1000 . +chr9 67789868 67792893 centromeric_repeat 1000 . +chr9 68410775 68435115 Low_mappability_island 1000 . +chr9 69677073 69687998 centromeric_repeat 1000 . +chr9 69689770 69711497 centromeric_repeat 1000 . +chr9 69947961 70011196 centromeric_repeat 1000 . +chr9 70076144 70076855 centromeric_repeat 1000 . +chr9 70318723 70327683 centromeric_repeat 1000 . +chr9 72653073 72653572 Satellite_repeat 1000 . +chr9 78790077 78790255 (GAATG)n 1000 . +chr9 79186574 79187026 LSU-rRNA_Hsa 1000 . +chr9 141019938 141021783 TAR1 1000 . +chrM 1 16571 chrM 1000 . +chrX 55206111 55206740 Low_mappability_island 1000 . +chrX 55207753 55208152 Low_mappability_island 1000 . +chrX 55208300 55208643 Low_mappability_island 1000 . +chrX 55208980 55209208 Low_mappability_island 1000 . +chrX 55209655 55210006 Low_mappability_island 1000 . +chrX 58330488 58330843 centromeric_repeat 1000 . +chrX 58373806 58373962 centromeric_repeat 1000 . +chrX 58377680 58377864 centromeric_repeat 1000 . +chrX 58415350 58416387 centromeric_repeat 1000 . +chrX 58432411 58432680 centromeric_repeat 1000 . +chrX 58485887 58486241 centromeric_repeat 1000 . +chrX 58488898 58494528 centromeric_repeat 1000 . +chrX 58499466 58504235 centromeric_repeat 1000 . +chrX 58506076 58528214 centromeric_repeat 1000 . +chrX 58528184 58536883 centromeric_repeat 1000 . +chrX 58544061 58582415 centromeric_repeat 1000 . +chrX 61681834 61919683 centromeric_repeat 1000 . +chrX 62003205 62041580 centromeric_repeat 1000 . +chrX 83658929 83659019 Low_mappability_island 1000 . +chrX 108297348 108297886 LSU-rRNA_Hsa 1000 . +chrX 114959057 115006437 Low_mappability_island 1000 . +chrX 125605623 125607351 Low_mappability_island 1000 . +chrX 125714985 125715338 Low_mappability_island 1000 . +chrX 125864844 125864980 Low_mappability_island 1000 . +chrX 125865719 125865874 Low_mappability_island 1000 . +chrY 313470 313613 ALR/Alpha 1000 . +chrY 3004989 3005175 LSU-rRNA_Hsa 1000 . +chrY 4212807 4212910 Low_mappability_island 1000 . +chrY 7671817 7694928 BSR/Beta 1000 . +chrY 7726064 7730229 BSR/Beta 1000 . +chrY 7730734 7731598 BSR/Beta 1000 . +chrY 7735811 7752887 BSR/Beta 1000 . +chrY 7785067 7806311 BSR/Beta 1000 . +chrY 7806856 7814704 BSR/Beta 1000 . +chrY 7815230 7820478 BSR/Beta 1000 . +chrY 7829937 7832032 BSR/Beta 1000 . +chrY 7832744 7848695 BSR/Beta 1000 . +chrY 7870343 7873582 BSR/Beta 1000 . +chrY 7874115 7874584 BSR/Beta 1000 . +chrY 7875409 7885257 BSR/Beta 1000 . +chrY 7886545 7894591 BSR/Beta 1000 . +chrY 7898927 7916812 BSR/Beta 1000 . +chrY 7918790 7921352 BSR/Beta 1000 . +chrY 7926344 7936705 BSR/Beta 1000 . +chrY 7941130 7947438 BSR/Beta 1000 . +chrY 7948790 7964448 BSR/Beta 1000 . +chrY 8179010 8181143 BSR/Beta 1000 . +chrY 8181757 8213330 BSR/Beta 1000 . +chrY 8214629 8215637 BSR/Beta 1000 . +chrY 8220421 8230061 BSR/Beta 1000 . +chrY 8230686 8231546 BSR/Beta 1000 . +chrY 8240772 8265916 BSR/Beta 1000 . +chrY 8291535 8292942 BSR/Beta 1000 . +chrY 8294002 8295175 BSR/Beta 1000 . +chrY 8296944 8321375 BSR/Beta 1000 . +chrY 8325813 8325929 BSR/Beta 1000 . +chrY 8326678 8333466 BSR/Beta 1000 . +chrY 8334027 8342387 BSR/Beta 1000 . +chrY 8356544 8369346 BSR/Beta 1000 . +chrY 8909560 8909925 TAR1 1000 . +chrY 8979478 8979585 Low_mappability_island 1000 . +chrY 9072781 9072993 TAR1 1000 . +chrY 9908430 9925608 centromeric_repeat 1000 . +chrY 9981952 9982126 BSR/Beta 1000 . +chrY 10034864 10036712 SSU-rRNA_Hsa 1000 . +chrY 10040627 10045657 ALR/Alpha 1000 . +chrY 10047773 10052533 ALR/Alpha 1000 . +chrY 10053695 10057722 ALR/Alpha 1000 . +chrY 10059394 10073694 ALR/Alpha 1000 . +chrY 10075082 10075781 ALR/Alpha 1000 . +chrY 10080736 10104539 ALR/Alpha 1000 . +chrY 13104530 13144368 centromeric_repeat 1000 . +chrY 13193966 13196535 Low_mappability_island 1000 . +chrY 13252193 13259484 centromeric_repeat 1000 . +chrY 13290177 13290667 chrM 1000 . +chrY 13445957 13490591 Satellite_repeat 1000 . +chrY 13642186 13749784 Satellite_repeat 1000 . +chrY 13798522 13870984 Satellite_repeat 1000 . +chrY 19691913 19692524 LSU-rRNA_Hsa 1000 . +chrY 19764063 19776198 ALR/Alpha 1000 . +chrY 19780600 19781704 ALR/Alpha 1000 . +chrY 19783669 19796396 ALR/Alpha 1000 . +chrY 19800068 19801419 ALR/Alpha 1000 . +chrY 19808085 19817100 ALR/Alpha 1000 . +chrY 19944298 19944581 TAR1 1000 . +chrY 20235195 20235478 TAR1 1000 . +chrY 20362679 20371694 ALR/Alpha 1000 . +chrY 20378360 20379711 ALR/Alpha 1000 . +chrY 20383383 20396110 ALR/Alpha 1000 . +chrY 20398075 20399179 ALR/Alpha 1000 . +chrY 20403581 20415713 ALR/Alpha 1000 . +chrY 20487248 20487859 LSU-rRNA_Hsa 1000 . +chrY 23124788 23125577 BSR/Beta 1000 . +chrY 23149027 23151205 BSR/Beta 1000 . +chrY 23157969 23158245 BSR/Beta 1000 . +chrY 23159001 23167737 BSR/Beta 1000 . +chrY 23178886 23181770 BSR/Beta 1000 . +chrY 23220740 23223625 BSR/Beta 1000 . +chrY 23234125 23235822 BSR/Beta 1000 . +chrY 23236898 23248080 BSR/Beta 1000 . +chrY 23248729 23248851 BSR/Beta 1000 . +chrY 23899295 23899388 TAR1 1000 . +chrY 23956449 23956628 TAR1 1000 . +chrY 24247659 24247700 TAR1 1000 . +chrY 24630999 24631040 TAR1 1000 . +chrY 24953159 24975657 BSR/Beta 1000 . +chrY 24980997 24991235 BSR/Beta 1000 . +chrY 25022753 25039185 BSR/Beta 1000 . +chrY 25040153 25042421 BSR/Beta 1000 . +chrY 25048332 25059258 BSR/Beta 1000 . +chrY 25060235 25064798 BSR/Beta 1000 . +chrY 25099139 25121882 BSR/Beta 1000 . +chrY 25122419 25160800 BSR/Beta 1000 . +chrY 25182404 25192372 BSR/Beta 1000 . +chrY 25217722 25219409 BSR/Beta 1000 . +chrY 25493588 25495275 BSR/Beta 1000 . +chrY 26148315 26148450 TAR1 1000 . +chrY 26586905 26609405 BSR/Beta 1000 . +chrY 26614745 26624983 BSR/Beta 1000 . +chrY 26656502 26672934 BSR/Beta 1000 . +chrY 26673902 26676170 BSR/Beta 1000 . +chrY 26682081 26693007 BSR/Beta 1000 . +chrY 26693984 26698547 BSR/Beta 1000 . +chrY 26732883 26755623 BSR/Beta 1000 . +chrY 26756160 26794538 BSR/Beta 1000 . +chrY 26816148 26826116 BSR/Beta 1000 . +chrY 26851466 26853153 BSR/Beta 1000 . +chrY 27109247 27110934 BSR/Beta 1000 . +chrY 27136281 27146249 BSR/Beta 1000 . +chrY 27167859 27206241 BSR/Beta 1000 . +chrY 27206778 27229502 BSR/Beta 1000 . +chrY 27263848 27268411 BSR/Beta 1000 . +chrY 27269388 27280315 BSR/Beta 1000 . +chrY 27286226 27288494 BSR/Beta 1000 . +chrY 27289462 27305895 BSR/Beta 1000 . +chrY 27337415 27347656 BSR/Beta 1000 . +chrY 27352996 27375497 BSR/Beta 1000 . +chrY 27813984 27814119 TAR1 1000 . +chrY 28555026 28555353 TAR1 1000 . +chrY 28784129 28819695 Satellite_repeat 1000 . +chrY 58819367 58917648 (CATTC)n 1000 . +chrY 58971913 58997782 (CATTC)n 1000 . +chrY 59361267 59362785 TAR1 1000 . diff --git a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.1.bt2 b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.1.bt2 new file mode 100644 index 0000000..2d69b01 Binary files /dev/null and b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.1.bt2 differ diff --git a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.2.bt2 b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.2.bt2 new file mode 100644 index 0000000..b70b3e8 Binary files /dev/null and b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.2.bt2 differ diff --git a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.3.bt2 b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.3.bt2 new file mode 100644 index 0000000..2356a12 Binary files /dev/null and b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.3.bt2 differ diff --git a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.4.bt2 b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.4.bt2 new file mode 100644 index 0000000..f09f41d Binary files /dev/null and b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.4.bt2 differ diff --git a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.amb b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.amb deleted file mode 100644 index 6b6d024..0000000 --- a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.amb +++ /dev/null @@ -1 +0,0 @@ -5492 13 0 diff --git a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.ann b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.ann deleted file mode 100644 index c5ad826..0000000 --- a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.ann +++ /dev/null @@ -1,27 +0,0 @@ -5492 13 11 -0 AID (null) -0 132 0 -0 CBP (null) -132 78 0 -0 Extended-Tap (null) -210 2096 0 -0 FLAG-3x (null) -2306 67 0 -0 FRB (null) -2373 279 0 -0 GFP (null) -2652 710 0 -0 HA_v1 (null) -3362 81 0 -0 HA_v2 (null) -3443 81 0 -0 HA_v3 (null) -3524 108 0 -0 HaloTag (null) -3632 891 0 -0 MNase_v2 (null) -4523 450 0 -0 Myc-3x (null) -4973 108 0 -0 ProteinA (null) -5081 411 0 diff --git a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.bwt b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.bwt deleted file mode 100644 index b5acac4..0000000 Binary files a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.bwt and /dev/null differ diff --git a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.pac b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.pac deleted file mode 100644 index 3038c99..0000000 Binary files a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.pac and /dev/null differ diff --git a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.rev.1.bt2 b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.rev.1.bt2 new file mode 100644 index 0000000..e24e1a2 Binary files /dev/null and b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.rev.1.bt2 differ diff --git a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.rev.2.bt2 b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.rev.2.bt2 new file mode 100644 index 0000000..7e00710 Binary files /dev/null and b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.rev.2.bt2 differ diff --git a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.sa b/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.sa deleted file mode 100644 index 77e20fc..0000000 Binary files a/EpitopeID/sacCer3_EpiID/FASTA_tag/ALL_TAG.fa.sa and /dev/null differ diff --git a/StrainID/hg38_ENCODE.tar.gz b/StrainID/hg38_ENCODE.tar.gz new file mode 100644 index 0000000..b5468e7 Binary files /dev/null and b/StrainID/hg38_ENCODE.tar.gz differ diff --git a/StrainID/hg38_VCF.tar.gz b/StrainID/hg38_VCF.tar.gz new file mode 100644 index 0000000..bee1be7 Binary files /dev/null and b/StrainID/hg38_VCF.tar.gz differ diff --git a/StrainID/utility_scripts/Model.csv b/StrainID/utility_scripts/Model.csv new file mode 100644 index 0000000..4e19b6c --- /dev/null +++ b/StrainID/utility_scripts/Model.csv @@ -0,0 +1,1865 @@ +ModelID,PatientID,CellLineName,StrippedCellLineName,Age,SourceType,SangerModelID,RRID,DepmapModelType,AgeCategory,GrowthPattern,LegacyMolecularSubtype,PrimaryOrMetastasis,SampleCollectionSite,Sex,SourceDetail,LegacySubSubtype,CatalogNumber,CCLEName,COSMICID,PublicComments,WTSIMasterCellID,EngineeredModel,TreatmentStatus,OnboardedMedia,PlateCoating,OncotreeCode,OncotreeSubtype,OncotreePrimaryDisease,OncotreeLineage +ACH-000001,PT-gj46wT,NIH:OVCAR-3,NIHOVCAR3,60.0,Commercial,SIDM00105,CVCL_0465,HGSOC,Adult,Adherent,,Metastatic,ascites,Female,ATCC,high_grade_serous,HTB-71,NIHOVCAR3_OVARY,905933.0,,2201.0,,,MF-001-041,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000002,PT-5qa3uk,HL-60,HL60,36.0,Commercial,SIDM00829,CVCL_0002,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,ATCC,M3,CCL-240,HL60_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,905938.0,,55.0,,,MF-005-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000003,PT-puKIyc,CACO2,CACO2,72.0,Commercial,SIDM00891,CVCL_0025,COAD,Adult,Adherent,,Primary,Colon,Male,ATCC,,HTB-37,CACO2_LARGE_INTESTINE,,,,,Unknown,MF-015-009,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000004,PT-q4K2cp,HEL,HEL,30.0,Commercial,SIDM00594,CVCL_0001,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,M6,ACC 11,HEL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907053.0,,783.0,,Post-treatment,MF-001-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000005,PT-q4K2cp,HEL 92.1.7,HEL9217,30.0,Commercial,SIDM00593,CVCL_2481,AML,Adult,Mixed,,,bone_marrow,Male,ATCC,M6,HEL9217,HEL9217_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000006,PT-ej13Dz,MONO-MAC-6,MONOMAC6,64.0,Commercial,SIDM01023,CVCL_1426,AMOL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,M5,ACC 124,MONOMAC6_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908148.0,,2167.0,,,MF-001-001,None,AMOL,Acute Monoblastic/Monocytic Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000007,PT-NOXwpH,LS513,LS513,63.0,Commercial,SIDM00677,CVCL_1386,COAD,Adult,Adherent,,Primary,large_intestine,Male,ATCC,,CRL-2134,LS513_LARGE_INTESTINE,907795.0,,569.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000008,PT-fp8PeY,A101D,A101D,56.0,Commercial,SIDM00801,CVCL_1057,MEL,Adult,Adherent,,Primary,skin,Male,ATCC,,CRL-7898,A101D_SKIN,910921.0,,1806.0,,,MF-002-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000009,PT-puKIyc,C2BBe1,C2BBE1,72.0,Commercial,SIDM01233,CVCL_1096,COAD,Adult,Adherent,,Primary,Colon,Male,ATCC,,CRL-2102,C2BBE1_LARGE_INTESTINE,910700.0,,2104.0,,,MF-002-021,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000011,PT-AR7W9o,253J,253J,53.0,Commercial,,CVCL_7935,BLCA,Adult,Adherent,,Metastatic,lymph_node,Male,KCLB,,80001,253J_URINARY_TRACT,,,,,,MF-002-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000012,PT-NdspH5,HCC-827,HCC827,39.0,Commercial,SIDM01067,CVCL_2063,LUAD,Adult,Adherent,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,CRL-2868,HCC827_LUNG,1240146.0,,354.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000013,PT-gj46wT,ONCO-DG-1,ONCODG1,60.0,Commercial,SIDM00093,CVCL_1882,HGSOC,Adult,Adherent,,Metastatic,ascites,Female,DSMZ,high_grade_serous,ACC 507,ONCODG1_OVARY,,SNP fingerprinting confirms that this line is an OVCAR-3 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,MF-001-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000014,PT-fp8PeY,Hs 294T,HS294T,56.0,Commercial,SIDM00800,CVCL_0331,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,,HTB-140,HS294T_SKIN,,,,,,MF-002-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000015,PT-ffwajI,NCI-H1581,NCIH1581,44.0,Commercial,SIDM00748,CVCL_1479,LCLC,Adult,Adherent,,Primary,lung,Male,ATCC via Meyerson (Broad) who received from Gazdar,NSCLC_large_cell,CRL-5878,NCIH1581_LUNG,908471.0,,1237.0,,,MF-007-008,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000016,PT-JnARLB,SLR 21,SLR21,,Academic lab,,CVCL_V607,CCRCC,Unknown,Adherent,,Metastatic,kidney,Unknown,Bill Kaelin (DFCI),,,SLR21_KIDNEY,,,,,,MF-001-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000017,PT-8CE6ah,SK-BR-3,SKBR3,43.0,Commercial,SIDM00897,CVCL_0033,BRCA,Adult,Mixed,HER2_amp,Metastatic,pleural_effusion,Female,ATCC,ERneg_HER2pos,HTB-30,SKBR3_BREAST,,,,,,MF-023-001,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000018,PT-Mi0cKz,T24,T24,82.0,Commercial,SIDM01184,CVCL_0554,BLCA,Adult,Adherent,,Primary,urinary_tract,Female,ATCC,,HTB-4,T24_URINARY_TRACT,724812.0,,1455.0,,,MF-023-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000019,PT-viJKnw,MCF7,MCF7,69.0,Commercial,SIDM00148,CVCL_0031,BRCA,Adult,Adherent,luminal,Metastatic,pleural_effusion,Female,ATCC,ERpos_HER2neg,HTB-22,MCF7_BREAST,905946.0,,588.0,,,MF-015-010,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000020,PT-GMWtlF,MHH-CALL-2,MHHCALL2,15.0,Commercial,SIDM00331,CVCL_1409,BLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,b_cell,,MHHCALL2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908132.0,,1906.0,,,MF-001-020,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000021,PT-9p1WQv,NCI-H1693,NCIH1693,55.0,Commercial,SIDM00742,CVCL_1488,LUAD,Adult,Adherent,,Metastatic,lymph_node,Female,ATCC,NSCLC_adenocarcinoma,CRL-5887,NCIH1693_LUNG,687802.0,,634.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000022,PT-lVglGI,PA-TU-8988S,PATU8988S,64.0,Commercial,SIDM00452,CVCL_1846,PAAD,Adult,Adherent,,Metastatic,liver,Female,DSMZ,exocrine_adenocarcinoma,ACC 204,PATU8988S_PANCREAS,,,,,,MF-002-003,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000023,PT-lVglGI,PA-TU-8988T,PATU8988T,64.0,Commercial,SIDM00453,CVCL_1847,PAAD,Adult,Adherent,,Metastatic,liver,Female,DSMZ,exocrine_adenocarcinoma,ACC 162,PATU8988T_PANCREAS,1240201.0,,1242.0,,,MF-002-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000024,PT-codP7n,OPM-2,OPM2,56.0,Commercial,SIDM00457,CVCL_1625,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,,,OPM2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909249.0,,112.0,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000025,PT-nrgozM,CH-157MN,CH157MN,41.0,Academic lab,,CVCL_5723,MNG,Adult,Mixed,,Primary,central_nervous_system,Female,Dunn (BWH),,,CH157MN_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,MNG,Meningioma,Meningothelial Tumor,CNS/Brain +ACH-000026,PT-AR7W9o,253J-BV,253JBV,53.0,Commercial,,CVCL_7937,BLCA,Adult,Mixed,,Metastatic,lymph_node,Male,KCLB,,80002,253JBV_URINARY_TRACT,,,,,,MF-002-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000027,PT-llPs5J,GOS-3,GOS3,64.0,Commercial,,CVCL_2050,GB,Adult,Adherent,,Primary,central_nervous_system,Male,DSMZ,glioblastoma,ACC 408,GOS3_CENTRAL_NERVOUS_SYSTEM,,SNP fingerprinting confirms that this line is an U-343 MG derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000028,PT-viJKnw,KPL-1,KPL1,69.0,Commercial,SIDM00147,CVCL_2094,BRCA,Adult,Adherent,luminal,Metastatic,pleural_effusion,Female,DSMZ,ERpos_HER2neg,,KPL1_BREAST,,SNP fingerprinting confirms that this line is an MCF-7 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,MF-002-001,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000029,PT-NdspH5,HCC-827-GR5,HCC827GR5,39.0,Academic lab,,CVCL_V622,LUAD,Adult,Adherent,,Primary,lung,Female,Janne (DFCI),NSCLC_adenocarcinoma,,HCC827GR5_LUNG,,,,,,MF-001-014,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000030,PT-nDRyc6,PC-14,PC14,45.0,Commercial,SIDM00237,CVCL_1640,LUAD,Adult,Adherent,,Primary,lung,Male,RIKEN,NSCLC_adenocarcinoma,RCB4455,PC14_LUNG,753608.0,,198.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000031,PT-o4NqQC,Panc 02.13,PANC0213,64.0,Commercial,,CVCL_1634,PAAD,Adult,Adherent,,Primary,pancreas,Female,ATCC,exocrine_adenocarcinoma,CRL-2554,PANC0213_PANCREAS,,,,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000032,PT-p2KOyI,MHH-CALL-3,MHHCALL3,11.0,Commercial,,CVCL_0089,BLL,Pediatric,Mixed,,Primary,bone_marrow,Female,DSMZ,b_cell,ACC-339,MHHCALL3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,Pre-treatment,MF-001-020,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000033,PT-9p1WQv,NCI-H1819,NCIH1819,55.0,Academic lab,,CVCL_1497,LUAD,Adult,Adherent,,Metastatic,lymph_node,Female,Meyerson (Broad) who received from Minna,NSCLC_adenocarcinoma,,NCIH1819_LUNG,,,,,,MF-001-014,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000034,PT-5qa3uk,PLB-985,PLB985,35.0,Academic lab,SIDM00811,CVCL_2162,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,Pellman (DFCI),M3,,PLB985_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,SNP fingerprinting confirms that this line is an HL-60 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,MF-001-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000035,PT-5LVIPg,NCI-H1650,NCIH1650,27.0,Commercial,SIDM00745,CVCL_1483,NSCLC,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_adenocarcinoma,NCIH1650,NCIH1650_LUNG,687800.0,,1548.0,,,MF-001-001,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-000036,PT-llPs5J,U343,U343,64.0,Academic lab,,CVCL_4773,GB,Adult,Adherent,,Primary,central_nervous_system,Male,Linda Chin,glioblastoma,,U343_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000037,PT-JfLphU,S-117,S117,47.0,Commercial,SIDM00035,CVCL_1674,SARCNOS,Adult,Adherent,,,soft_tissue,Female,DSMZ,,266,S117_THYROID,,,,,,MF-001-001,None,SARCNOS,"Sarcoma, NOS","Sarcoma, NOS",Soft Tissue +ACH-000038,PT-LoXnDo,EHEB,EHEB,69.0,Commercial,SIDM01049,CVCL_1194,BLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,b_cell,,EHEB_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906854.0,,39.0,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000039,PT-wGDMGe,SK-N-MC,SKNMC,14.0,Commercial,SIDM00634,CVCL_0530,ES,Pediatric,Adherent,EWS_FLI,Metastatic,bone,Female,ATCC,,HTB-10,SKNMC_BONE,,,,,,MF-006-001,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-000040,PT-5XnRfQ,U-118 MG,U118MG,47.0,Commercial,SIDM01193,CVCL_0633,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,ATCC,astrocytoma,HTB-15,U118MG_CENTRAL_NERVOUS_SYSTEM,687588.0,SNP fingerprinting confirms that this line is an U-138 MG derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,7.0,,,MF-002-001,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-000041,PT-3yDaRJ,RD-ES,RDES,19.0,Commercial,,CVCL_2169,ES,Adult,Mixed,EWS_FLI,Primary,bone,Male,ATCC,,HTB-166,RDES_BONE,,,,,,MF-001-017,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-000042,PT-QOpMVz,Panc 02.03,PANC0203,70.0,Commercial,SIDM01139,CVCL_1633,PAAD,Adult,Adherent,,Primary,pancreas,Female,ATCC,exocrine_adenocarcinoma,CRL-2553,PANC0203_PANCREAS,1298475.0,,1838.0,,,MF-001-042,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000043,PT-rTUVZQ,Hs 895.T,HS895T,48.0,Commercial,,CVCL_0993,ZFIBSKI,Adult,Adherent,,Metastatic,fibroblast,Female,ATCC,,CRL-7637,HS895T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Skin",Non-Cancerous,Fibroblast +ACH-000044,PT-HMBfbj,MDA-MB-134-VI,MDAMB134VI,47.0,Commercial,SIDM00005,CVCL_0617,ILC,Adult,Adherent,luminal,Metastatic,pleural_effusion,Female,ATCC,ERpos_HER2neg,,MDAMB134VI_BREAST,,,,,,MF-021-003,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000045,PT-zb7Sx0,MV4-11,MV411,10.0,Commercial,SIDM00657,CVCL_0064,AML,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,ATCC,,,MV411_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908156.0,,133.0,,,MF-005-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000046,PT-zV8Sol,ACHN,ACHN,22.0,Commercial,SIDM00123,CVCL_1067,PRCC,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,,CRL-1611,ACHN_KIDNEY,905950.0,,371.0,,,MF-006-001,None,PRCC,Papillary Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000047,PT-UVwT4j,GCIY,GCIY,39.0,Commercial,SIDM00274,CVCL_1228,STAD,Adult,Adherent,,Metastatic,ascites,Female,RIKEN,,RCB0555,GCIY_STOMACH,906869.0,,1414.0,,,MF-006-012,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000048,PT-EehOTC,TOV-112D,TOV112D,42.0,Commercial,SIDM01170,CVCL_3612,EOV,Adult,Adherent,,Primary,ovary,Female,ATCC,endometrioid,CRL-11731,TOV112D_OVARY,1299070.0,,5.0,,,MF-044-001,None,EOV,Endometrioid Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000049,PT-qWYYgr,HEK TE,HEKTE,,Academic lab,,CVCL_WS59,ZIMMEKC,Unknown,Adherent,,,kidney,Unknown,Jesse Boehm (Broad),,,HEKTE_KIDNEY,,,,,,,None,,Immortalized Embyonic Kidney Cells,Non-Cancerous,Kidney +ACH-000050,PT-HOg2sh,NCI-H929,NCIH929,62.0,Commercial,SIDM01148,CVCL_1600,PCM,Adult,Suspension,,Metastatic,pleural_effusion,Female,ATCC,plasmacytoma,CRL-9068,NCIH929_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,724825.0,SNP fingerprinting rules out K-562 contamination.,1230.0,,,MF-001-006,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000051,PT-xfVhgW,TE 617.T,TE617T,1.0,Commercial,,CVCL_1755,RMS,Pediatric,Unknown,,Primary,soft_tissue,Female,ATCC,,Discontinued,TE617T_SOFT_TISSUE,,,,,,MF-002-001,None,RMS,Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-000052,PT-IAac7b,A-673,A673,15.0,Commercial,SIDM00848,CVCL_0080,ES,Pediatric,Adherent,EWS_FLI,Primary,soft_tissue,Female,ATCC,,CRL-1598,A673_BONE,684052.0,,660.0,,,MF-002-001,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-000053,PT-nECHHn,KARPAS-299,KARPAS299,25.0,Academic lab,SIDM01010,CVCL_1324,ALCLALKP,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,Received from NIBRI,t_cell_ALCL,,KARPAS299_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907273.0,,906.0,,,MF-001-021,None,ALCLALKP,Anaplastic Large-Cell Lymphoma ALK Positive,Non-Hodgkin Lymphoma,Lymphoid +ACH-000054,PT-cVfhmE,HT-1080,HT1080,35.0,Commercial,SIDM00828,CVCL_0317,FIBS,Adult,Adherent,,Metastatic,soft_tissue,Male,ATCC,,CCL-121,HT1080_SOFT_TISSUE,907064.0,,1391.0,,,MF-006-001,None,FIBS,Fibrosarcoma,Fibrosarcoma,Soft Tissue +ACH-000055,PT-xKYZGz,D283 Med,D283MED,6.0,Commercial,SIDM00888,CVCL_1155,MBL,Pediatric,Mixed,MYC_exp,Metastatic,abdomen,Male,ATCC,med_group_3,HTB-185,D283MED_CENTRAL_NERVOUS_SYSTEM,906834.0,,1184.0,,,MF-006-001,None,MBL,Medulloblastoma,Embryonal Tumor,CNS/Brain +ACH-000056,PT-QeK3sM,DOHH-2,DOHH2,60.0,Commercial,SIDM00981,CVCL_1179,DLBCLNOS,Adult,Suspension,,Metastatic,pleural_effusion,Male,DSMZ,DLBCL,ACC 47,DOHH2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906842.0,,1339.0,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000057,PT-codP7n,OPM-1,OPM1,56.0,Academic lab,SIDM00456,CVCL_5210,PCM,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,,,,OPM1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000058,PT-HRqr49,ML-1,ML1,50.0,Commercial,SIDM00442,CVCL_H525,THFO,Adult,Adherent,,Primary,thyroid,Female,DSMZ,follicular,,ML1_THYROID,1240178.0,,1227.0,,,MF-002-009,None,THFO,Follicular Thyroid Cancer,Well-Differentiated Thyroid Cancer,Thyroid +ACH-000059,PT-rikOUx,SUP-B15,SUPB15,9.0,Commercial,SIDM01176,CVCL_0103,BLLBCRABL1,Pediatric,Suspension,,Primary,bone_marrow,Male,ATCC,b_cell,CRL-1929,SUPB15_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1247871.0,,786.0,,,MF-005-008,None,BLLBCRABL1,B-Lymphoblastic Leukemia/Lymphoma with t(9;22)(q34.1;q11.2);BCR-ABL1,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000060,PT-9JMXWA,Panc 10.05,PANC1005,81.0,Commercial,SIDM01135,CVCL_1639,PAAD,Adult,Adherent,,Primary,pancreas,Male,ATCC,exocrine_adenocarcinoma,CRL-2547,PANC1005_PANCREAS,925348.0,,197.0,,,MF-001-019,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000061,PT-hDGIfb,HH,HH,61.0,Commercial,SIDM00671,CVCL_1280,MTNN,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,ATCC,t_cell_cutaneous,CRL-2105,HH_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907056.0,,310.0,,,MF-001-001,None,MTNN,Mature T and NK Neoplasms,Non-Hodgkin Lymphoma,Lymphoid +ACH-000062,PT-Rt0hf4,RERF-LC-MS,RERFLCMS,,Commercial,SIDM00355,CVCL_1655,LUAD,Unknown,Adherent,,Primary,lung,Male,JCRB,NSCLC_adenocarcinoma,JCRB0081,RERFLCMS_LUNG,910931.0,,2051.0,,,MF-015-004,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000063,PT-kuvMUl,Hs 616.T,HS616T,16.0,Commercial,SIDM01566,CVCL_0825,ZFIBLYM,Pediatric,Adherent,,,fibroblast,Male,ATCC,,CRL-7378,HS616T_FIBROBLAST,,Originally annotated as 'Lymphocyte' but after analysis we believe this line is a fibroblast.,,,,MF-002-001,None,,Fibroblast,Non-Cancerous,Fibroblast +ACH-000064,PT-Vm8sIp,SALE,SALE,,Academic lab,,CVCL_WS60,ZIMMLUNG,Unknown,Unknown,,,lung,Male,Jesse Boehm (Broad),,,SALE_LUNG,,,,,,,None,,Immortalized Lung Cells,Non-Cancerous,Lung +ACH-000065,PT-EsXLcC,OCI-AML5,OCIAML5,77.0,Commercial,SIDM00461,CVCL_1620,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,,ACC 247,OCIAML5_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330983.0,,2130.0,,,MF-003-002,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000066,PT-QxlnnP,HCC4006,HCC4006,,Commercial,,CVCL_1269,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_adenocarcinoma,CRL-2871,HCC4006_LUNG,,,,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000067,PT-25yL7C,Hs 683,HS683,76.0,Commercial,SIDM00666,CVCL_0844,ODG,Adult,Adherent,,Primary,central_nervous_system,Male,ATCC,oligodendroglioma,HTB-138,HS683_CENTRAL_NERVOUS_SYSTEM,1240150.0,,769.0,,,MF-002-001,None,ODG,Oligodendroglioma,Diffuse Glioma,CNS/Brain +ACH-000068,PT-WEet0z,REC-1,REC1,61.0,Commercial,SIDM01773,CVCL_1884,MCL,Adult,Suspension,,,lymph_node,Male,DSMZ,b_cell_mantle_cell,,REC1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,MCL,Mantle Cell Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000069,PT-RgXHAi,Hs 611.T,HS611T,48.0,Commercial,,CVCL_0823,HL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,ATCC,,CRL-7373,HS611T_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-002-001,None,HL,Hodgkin Lymphoma,Hodgkin Lymphoma,Lymphoid +ACH-000070,PT-0yrZJC,697,697,12.0,Commercial,SIDM01076,CVCL_0079,BLL,Pediatric,Suspension,,Primary,bone_marrow,Male,DSMZ,b_cell,ACC 42,697_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906800.0,,63.0,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000071,PT-HqO4KC,Hs 706.T,HS706T,16.0,Commercial,SIDM01704,CVCL_0863,ZFIBBON,Pediatric,Adherent,,,fibroblast,Female,ATCC,,CRL-7447,HS706T_BONE,,,,,,MF-002-001,None,,"Fibroblast, Bone",Non-Cancerous,Fibroblast +ACH-000072,PT-yx4h8S,MEG-01,MEG01,55.0,Commercial,SIDM00526,CVCL_0425,CMLBCRABL1,Adult,Adherent,,,bone_marrow,Male,ATCC,,CRL-2021,MEG01_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908126.0,,1263.0,,,MF-001-001,None,CMLBCRABL1,"Chronic Myeloid Leukemia, BCR-ABL1+",Myeloproliferative Neoplasms,Myeloid +ACH-000073,PT-wktVrL,GRANTA-519,GRANTA519,58.0,Commercial,SIDM01058,CVCL_1818,MCL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,b_cell_mantle_cell,ACC 342,GRANTA519_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1303897.0,,1776.0,,,MF-002-003,None,MCL,Mantle Cell Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000074,PT-FJahu6,KU812,KU812,38.0,Commercial,SIDM00308,CVCL_0379,CML,Adult,Adherent,,Primary,haematopoietic_and_lymphoid_tissue,Male,ATCC,blast_crisis,CRL-2099,KU812_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907311.0,,598.0,,,MF-001-001,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-000075,PT-59c3mE,U-87 MG,U87MG,44.0,Commercial,SIDM01189,CVCL_0022,GB,Adult,Adherent,,Primary,central_nervous_system,Male,ATCC,astrocytoma,HTB-14,U87MG_CENTRAL_NERVOUS_SYSTEM,687590.0,,549.0,,,MF-006-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000076,PT-Ugji7b,NCO2,NCO2,35.0,Commercial,,CVCL_3043,CML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,HSRRB,,IFO50525,NCO2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-000077,PT-brIUSU,MJ,MJ,50.0,Commercial,,CVCL_1414,MTNN,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,ATCC,t_cell_cutaneous,CRL-8294,MJ_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-005-001,None,MTNN,Mature T and NK Neoplasms,Non-Hodgkin Lymphoma,Lymphoid +ACH-000078,PT-Vot01h,MHH-NB-11,MHHNB11,4.0,Commercial,SIDM00387,CVCL_1412,NBL,Pediatric,Mixed,MYCN_amp,Metastatic,autonomic_ganglia,Male,DSMZ,,ACC 157,MHHNB11_AUTONOMIC_GANGLIA,908135.0,,1818.0,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000079,PT-5wqkwI,TE 125.T,TE125T,1.0,Commercial,SIDM01763,CVCL_1740,ZFIBSOF,Pediatric,Adherent,,,fibroblast,Female,ATCC,,CRL-7945_FL,TE125T_FIBROBLAST,,,,,,MF-006-001,None,,"Fibroblast, Soft Tissue",Non-Cancerous,Fibroblast +ACH-000080,PT-c6Ag34,BDCM,BDCM,,Commercial,,CVCL_4613,AMOL,Pediatric,Mixed,,,haematopoietic_and_lymphoid_tissue,Male,ATCC,M5,CRL-2740,BDCM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,AMOL,Acute Monoblastic/Monocytic Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000081,PT-OtgTTm,GDM-1,GDM1,66.0,Commercial,SIDM01057,CVCL_1230,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,ATCC,,CRL-2627,GDM1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906870.0,,164.0,,,MF-001-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000082,PT-noCCE4,"G-292, clone A141B1",G292CLONEA141B1,9.0,Commercial,SIDM00858,CVCL_2909,OS,Pediatric,Adherent,,Primary,bone,Female,ATCC,,CRL-1423,G292CLONEA141B1_BONE,1290807.0,,661.0,,,MF-023-001,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-000083,PT-BMJ8bq,Hs 281.T,HS281T,37.0,Commercial,SIDM01594,CVCL_0715,ZFIBBRE,Adult,Adherent,,,fibroblast,Female,ATCC,,,HS281T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Breast",Non-Cancerous,Fibroblast +ACH-000084,PT-S6ty7D,MUTZ-3,MUTZ3,29.0,Commercial,,CVCL_1433,AMLGATA2MECOM,Adult,Adherent,,,haematopoietic_and_lymphoid_tissue,Male,DSMZ,,ACC-295,MUTZ3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,,None,AMLGATA2MECOM,"AML with inv(3)(q21.3q26.2) or t(3;3)(q21.3;q26.2); GATA2, MECOM",Acute Myeloid Leukemia,Myeloid +ACH-000085,PT-FnO2p8,T3M-4,T3M4,64.0,Commercial,,CVCL_4056,PAAD,Adult,Adherent,,Primary,lymph_node,Male,RIKEN,exocrine_adenocarcinoma,RCB1021,T3M4_PANCREAS,,,,,,MF-004-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000086,PT-nZJ0Fu,ACC-MESO-1,ACCMESO1,61.0,Commercial,,CVCL_5113,PLEMESO,Adult,Adherent,,,pleura,Female,RIKEN,,RCB2292,ACCMESO1_PLEURA,,,,,,MF-001-001,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-000087,PT-VA04Md,SK-ES-1,SKES1,18.0,Commercial,SIDM01111,CVCL_0627,ES,Pediatric,Mixed,EWS_FLI,Primary,bone,Male,ATCC,,HTB-86,SKES1_BONE,684072.0,,41.0,,,MF-023-002,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-000088,PT-fmS8rl,Hs 172.T,HS172T,50.0,Commercial,SIDM01616,CVCL_0660,ZFIBURT,Adult,Unknown,,,fibroblast,Male,ATCC,,,HS172T_FIBROBLAST,,,,,,,None,,"Fibroblast, Urinary Tract",Non-Cancerous,Fibroblast +ACH-000089,PT-0joF2E,NCI-H684,NCIH684,55.0,Commercial,SIDM01665,CVCL_9980,COAD,Adult,Adherent,,Metastatic,liver,Male,KCLB,,90684,NCIH684_LARGE_INTESTINE,,,,,,,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000090,PT-j0lUB5,PC-3,PC3,62.0,Commercial,SIDM00088,CVCL_0035,PRAD,Adult,Adherent,,Metastatic,bone,Male,ATCC,,CRL-1435,PC3_PROSTATE,905934.0,,911.0,,,MF-004-001,None,PRAD,Prostate Adenocarcinoma,Prostate Adenocarcinoma,Prostate +ACH-000091,PT-kmyeHR,OV56,OV56,46.0,Commercial,SIDM00475,CVCL_2673,SOC,Adult,Adherent,,Metastatic,ascites,Female,ECACC,serous,96020759,OV56_OVARY,1480362.0,,686.0,,,MF-007-009,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000092,PT-GaubVg,NCI-H2452,NCIH2452,,Commercial,SIDM00722,CVCL_1553,PLBMESO,Adult,Adherent,,Metastatic,pleura,Male,ATCC,,CRL-5946,NCIH2452_PLEURA,908462.0,,624.0,,,MF-001-001,None,PLBMESO,"Pleural Mesothelioma, Biphasic Type",Pleural Mesothelioma,Pleura +ACH-000093,PT-X8PfQy,Panc 05.04,PANC0504,77.0,Commercial,,CVCL_1637,PAAD,Adult,Adherent,,Primary,pancreas,Female,ATCC,exocrine_adenocarcinoma,CRL-2557,PANC0504_PANCREAS,,,,,,MF-001-019,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000094,PT-bW9aaR,HPAF-II,HPAFII,44.0,Commercial,SIDM00669,CVCL_0313,PAAD,Adult,Adherent,,Metastatic,ascites,Male,ATCC,exocrine_adenocarcinoma,CRL-1997,HPAFII_PANCREAS,724869.0,,889.0,,,MF-002-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000095,PT-nsjOrX,D341 Med,D341Med,3.0,Commercial,,CVCL_0018,MBL,Pediatric,Mixed,MYC_amp,Primary,brain,Male,ATCC,med_group_3,HTB-187,D341MED_CENTRAL_NERVOUS_SYSTEM,,,,,Unknown,MF-015-009,None,MBL,Medulloblastoma,Embryonal Tumor,CNS/Brain +ACH-000096,PT-ABKGjf,G-401,G401,0.0,Commercial,SIDM00856,CVCL_0270,MRT,Pediatric,Adherent,,Primary,kidney,Male,ATCC,,CRL-1441,G401_SOFT_TISSUE,907299.0,,962.0,,,MF-023-001,None,MRT,Rhabdoid Cancer,Rhabdoid Cancer,Kidney +ACH-000097,PT-k1TO7o,ZR-75-1,ZR751,63.0,Commercial,SIDM00314,CVCL_0588,IDC,Adult,Adherent,luminal,Metastatic,ascites,Female,ATCC,ERpos_HER2neg,CRL-1500,ZR751_BREAST,,,,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000098,PT-HmIANs,GAMG,GAMG,42.0,Commercial,SIDM01055,CVCL_1226,GB,Adult,Adherent,,Primary,central_nervous_system,Female,DSMZ,glioblastoma,ACC 242,GAMG_CENTRAL_NERVOUS_SYSTEM,906868.0,,1174.0,,,MF-002-003,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000099,PT-JpfhsL,SIMA,SIMA,1.0,Commercial,SIDM00395,CVCL_1695,NBL,Pediatric,Adherent,,Primary,autonomic_ganglia,Male,DSMZ,,ACC 164,SIMA_AUTONOMIC_GANGLIA,753620.0,,2076.0,,Post-treatment,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000100,PT-BN67ox,RH-41,RH41,7.0,Commercial,SIDM00426,CVCL_2176,ARMS,Pediatric,Adherent,,Metastatic,liver,Female,DSMZ,alveolar,ACC 592,RH41_SOFT_TISSUE,1240210.0,,2052.0,,,MF-001-001,None,ARMS,Alveolar Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-000101,PT-6Sunyd,KE-37,KE37,27.0,Commercial,SIDM01003,CVCL_1327,ATLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,t_cell,46,KE37_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907277.0,SNP fingerprinting rules out CCRF-CEM contamination.,1012.0,,,MF-001-001,None,ATLL,Adult T-Cell Leukemia/Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000102,PT-CuQsSC,GMS-10,GMS10,49.0,Commercial,SIDM01074,CVCL_1233,GB,Adult,Adherent,,Primary,central_nervous_system,Male,DSMZ,glioblastoma,,GMS10_CENTRAL_NERVOUS_SYSTEM,906873.0,,294.0,,,MF-003-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000103,PT-gCHPXX,Caov-4,CAOV4,45.0,Commercial,SIDM00918,CVCL_0202,HGSOC,Adult,Adherent,,Metastatic,ovary,Female,ATCC,high_grade_serous,HTB-76,CAOV4_OVARY,949090.0,,1524.0,,,MF-021-003,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000104,PT-JJAsvr,Loucy,LOUCY,38.0,Commercial,SIDM00342,CVCL_1380,ATLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,ATCC,t_cell,CRL-2629,LOUCY_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907789.0,,1645.0,,,MF-001-001,None,ATLL,Adult T-Cell Leukemia/Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000105,PT-MYSpL6,ALL-SIL,ALLSIL,17.0,Commercial,SIDM00994,CVCL_1805,TLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,t_cell,ACC 511,ALLSIL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1295740.0,,2263.0,,,MF-001-001,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000106,PT-JfG7uC,JVM-2,JVM2,63.0,Commercial,SIDM01013,CVCL_1319,MCL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,DSMZ,b_cell_mantle_cell,,JVM2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907269.0,,764.0,,,MF-001-001,None,MCL,Mantle Cell Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000107,PT-vjRLEt,Capan-2,CAPAN2,56.0,Commercial,SIDM00943,CVCL_0026,PAAD,Adult,Adherent,,Primary,pancreas,Male,ATCC,exocrine_adenocarcinoma,HTB-80,CAPAN2_PANCREAS,910915.0,,703.0,,,MF-023-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000108,PT-GEVVKA,KP-3,KP3,75.0,Commercial,SIDM00571,CVCL_3005,PAASC,Adult,Adherent,,Metastatic,liver,Male,HSRRB,exocrine_adenosquamous,JCRB0178.0,KP3_PANCREAS,1298219.0,,155.0,,,MF-001-001,None,PAASC,Adenosquamous Carcinoma of the Pancreas,Adenosquamous Carcinoma of the Pancreas,Pancreas +ACH-000109,PT-Zwpb82,NCI-H3255,NCIH3255,52.0,Academic lab,SIDM00046,CVCL_6831,LUAD,Adult,Mixed,,Primary,lung,Female,Received from CCLE; originally Meyerson (Broad) who received from Minna,NSCLC_adenocarcinoma,,NCIH3255_LUNG,,,,,,MF-013-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000110,PT-5JFPe5,NCC-StC-K140,NCCSTCK140,36.0,Commercial,,CVCL_3055,STAD,Adult,Suspension,,Primary,stomach,Female,RIKEN,,RCB2224,NCCSTCK140_STOMACH,,,,,,MF-002-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000111,PT-yKJqsn,HCC1187,HCC1187,41.0,Commercial,SIDM00885,CVCL_1247,IDC,Adult,Mixed,basal_A,Primary,breast,Female,ATCC,ERneg_HER2neg,CRL-2322,HCC1187_BREAST,749711.0,,1644.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000112,PT-SHvyVR,SIG-M5,SIGM5,63.0,Commercial,SIDM00396,CVCL_1694,AMOL,Adult,Suspension,,,bone_marrow,Male,DSMZ,M5,,SIGM5_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909715.0,,656.0,,,MF-005-001,None,AMOL,Acute Monoblastic/Monocytic Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000113,PT-OA9fna,OCI-AML2,OCIAML2,65.0,Commercial,SIDM00446,CVCL_1619,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,M4,ACC 247,OCIAML2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910947.0,,749.0,,,MF-003-005,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000114,PT-SNQPtX,SU.86.86,SU8686,57.0,Commercial,SIDM01188,CVCL_3881,PAAD,Adult,Adherent,,Metastatic,liver,Female,ATCC,exocrine_adenocarcinoma,CRL-1837,SU8686_PANCREAS,1240218.0,,268.0,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000115,PT-O15HlH,VCaP,VCAP,59.0,Commercial,SIDM01077,CVCL_2235,PRAD,Adult,Adherent,,Metastatic,bone,Male,ATCC,,CRL-2876,VCAP_PROSTATE,1299075.0,,2154.0,,,MF-002-001,None,PRAD,Prostate Adenocarcinoma,Prostate Adenocarcinoma,Prostate +ACH-000116,PT-eqFmWE,OAW28,OAW28,75.0,Commercial,SIDM00481,CVCL_1614,HGSOC,Adult,Adherent,,Metastatic,ascites,Female,ECACC,high_grade_serous,,OAW28_OVARY,946360.0,,173.0,,,MF-002-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000117,PT-qkpbqp,EFM-192A,EFM192A,46.0,Commercial,SIDM01002,CVCL_1812,BRCA,Adult,Adherent,HER2_amp,Metastatic,pleural_effusion,Female,DSMZ,ERpos_HER2pos,ACC 258,EFM192A_BREAST,1290798.0,,1187.0,,,MF-001-018,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000118,PT-jYcdmK,HUP-T3,HUPT3,66.0,Commercial,SIDM00533,CVCL_1299,PAAD,Adult,Adherent,,Metastatic,ascites,Male,DSMZ,exocrine_adenocarcinoma,ACC 259,HUPT3_PANCREAS,907285.0,,109.0,,,MF-006-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000119,PT-iJz19R,Hs 863.T,HS863T,5.0,Commercial,SIDM01726,CVCL_0959,ZFIBBON,Pediatric,Adherent,,,fibroblast,Female,ATCC,,CRL-7598,HS863T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Bone",Non-Cancerous,Fibroblast +ACH-000120,PT-6jhjWI,CHP-212,CHP212,1.0,Commercial,SIDM00910,CVCL_1125,NBL,Pediatric,Adherent,MYCN_amp,Primary,central_nervous_system,Male,ATCC,,CRL-2273,CHP212_AUTONOMIC_GANGLIA,906820.0,,13.0,,,MF-027-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000121,PT-5S5Gmg,NCI-H2405,NCIH2405,47.0,Commercial,SIDM00724,CVCL_1551,LUAD,Adult,Mixed,,Metastatic,ascites,Male,ATCC,NSCLC_adenocarcinoma,CRL-5944,NCIH2405_LUNG,687821.0,,82.0,,,MF-001-014,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000122,PT-v3CPfr,SUP-T11,SUPT11,74.0,Commercial,,CVCL_2210,ATLL,Adult,Suspension,,,bone_marrow,Male,DSMZ,t_cell,605,SUPT11_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,ATLL,Adult T-Cell Leukemia/Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000123,PT-hlFfQW,COV434,COV434,26.0,Commercial,,CVCL_2010,SCCO,Adult,Adherent,,Primary,ovary,Female,ECACC,Epithelial-Endometroid,7071909,COV434_OVARY,,,,,,MF-002-003,None,SCCO,Small Cell Carcinoma of the Ovary,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000124,PT-xqygCF,OCI-LY-19,OCILY19,27.0,Commercial,SIDM00460,CVCL_1878,DLBCLNOS,Adult,Suspension,,Primary,bone_marrow,Female,DSMZ,DLBCL,ACC 528,OCILY19_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330984.0,,1972.0,,,MF-003-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000125,PT-G9ksxs,TO 175.T,TO175T,29.0,Commercial,SIDM01759,CVCL_3806,ZFIBLYM,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,,CRL-7779,TO175T_FIBROBLAST,,Originally annotated as 'Lymphocyte' but after analysis we believe this line is a fibroblast.,,,,MF-002-001,None,,Fibroblast,Non-Cancerous,Fibroblast +ACH-000126,PT-Y9w387,KG-1-C,KG1C,13.0,Commercial,SIDM00784,CVCL_2971,ODG,Pediatric,Adherent,,Primary,central_nervous_system,Male,HSRRB,oligodendroglioma,,KG1C_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,ODG,Oligodendroglioma,Diffuse Glioma,CNS/Brain +ACH-000127,PT-Mi0cKz,SLR 20,SLR20,81.0,Academic lab,,CVCL_V606,BLCA,Adult,Adherent,,Primary,urinary_tract,Female,Bill Kaelin (DFCI),,,SLR20_KIDNEY,,SNP fingerprinting confirms that this line is an T-24 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,MF-001-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000128,PT-mUWSlp,LN-319,LN319,67.0,Academic lab,,CVCL_3958,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,Linda Chin,astrocytoma,,LN319_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-000129,PT-jzLNtr,NCI-H1341,NCIH1341,26.0,Commercial,SIDM00646,CVCL_1463,SCLC,Adult,Suspension,,Metastatic,cervix,Female,ATCC,,CRL-5864,NCIH1341_LUNG,1330964.0,,1825.0,,,MF-007-014,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000130,PT-LNhzm2,NALM-19,NALM19,26.0,Commercial,SIDM01685,CVCL_1835,BLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,,NALM19_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000131,PT-1aFiol,Hs 229.T,HS229T,65.0,Commercial,,CVCL_0698,ZFIBLUN,Adult,Adherent,,Primary,fibroblast,Male,ATCC,,,HS229T_FIBROBLAST,,,,,,,None,,"Fibroblast, Lung",Non-Cancerous,Fibroblast +ACH-000132,PT-F6NvL5,JHOS-2,JHOS2,45.0,Commercial,SIDM00305,CVCL_4647,HGSOC,Adult,Adherent,,Primary,ovary,Female,RIKEN,high_grade_serous,RCB1521,JHOS2_OVARY,1479995.0,,436.0,,,MF-007-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000133,PT-PvBEqK,Hs 729,HS729,74.0,Commercial,,CVCL_0871,ERMS,Adult,Adherent,,Primary,Unknown,Male,ATCC,,HTB-153,HS729_SOFT_TISSUE,,,,,,MF-002-008,None,ERMS,Embryonal Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-000134,PT-tuLBod,Hs 274.T,HS274T,66.0,Commercial,SIDM01592,CVCL_0711,ZFIBBRE,Adult,Adherent,,,fibroblast,Female,ATCC,,CRL-7222,HS274T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Breast",Non-Cancerous,Fibroblast +ACH-000135,PT-Shihsq,Hs 940.T,HS940T,57.0,Commercial,SIDM00662,CVCL_1038,ZFIBSKI,Adult,Adherent,,Primary,fibroblast,Male,ATCC,,CRL-7691,HS940T_FIBROBLAST,1298145.0,,707.0,,,MF-002-001,None,,"Fibroblast, Skin",Non-Cancerous,Fibroblast +ACH-000136,PT-3ZPjBh,CHP-126,CHP126,1.0,Commercial,SIDM00286,CVCL_1123,NBL,Pediatric,Adherent,MYCN_amp,Primary,autonomic_ganglia,Female,DSMZ,,,CHP126_AUTONOMIC_GANGLIA,910567.0,,38.0,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000137,PT-WFlL15,8-MG-BA,8MGBA,54.0,Commercial,SIDM00998,CVCL_1052,GB,Adult,Adherent,,Primary,central_nervous_system,Female,DSMZ,astrocytoma,ACC 432,8MGBA_CENTRAL_NERVOUS_SYSTEM,687562.0,,1207.0,,Pre-treatment,MF-006-014,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000138,PT-1nbcaA,CFPAC-1,CFPAC1,26.0,Commercial,SIDM00130,CVCL_1119,PAAD,Adult,Adherent,,Metastatic,liver,Male,ATCC,exocrine_adenocarcinoma,CRL-1918,CFPAC1_PANCREAS,906821.0,,572.0,,,MF-002-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000139,PT-rXQo6a,Panc 03.27,PANC0327,65.0,Commercial,SIDM01138,CVCL_1635,PAAD,Adult,Adherent,,Primary,pancreas,Female,ATCC,exocrine_adenocarcinoma,CRL-2549,PANC0327_PANCREAS,925346.0,,1873.0,,,MF-001-042,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000140,PT-IBKRSU,Pfeiffer,PFEIFFER,,Commercial,,CVCL_3326,DLBCLNOS,Adult,Suspension,,Metastatic,pleural_effusion,Male,ATCC,DLBCL,CRL-2632,PFEIFFER_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000141,PT-iqSI4n,SNU-308,SNU308,,Commercial,SIDM00161,CVCL_5048,GBAD,Unknown,Adherent,,Primary,biliary_tract,Unknown,KCLB,,308,SNU308_BILIARY_TRACT,,,,,,MF-001-005,None,GBAD,"Gallbladder Adenocarcinoma, NOS",Intracholecystic Papillary Neoplasm,Biliary Tract +ACH-000142,PT-Er9zxL,CAL-29,CAL29,80.0,Commercial,SIDM00936,CVCL_1808,BLCA,Adult,Adherent,,Primary,urinary_tract,Female,DSMZ,bladder_transitional_cell,515,CAL29_URINARY_TRACT,1290730.0,,2040.0,,,MF-002-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000143,PT-1M8cz3,HCC2429,HCC2429,34.0,Academic lab,,CVCL_5132,NSCLC,Adult,Adherent,,Primary,lung,Female,Meyerson (Broad) who received from Minna,,,HCC2429_LUNG,,,,,,MF-001-001,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-000144,PT-n15ylb,RERF-GC-1B,RERFGC1B,41.0,Commercial,SIDM00358,CVCL_3152,STAD,Adult,Adherent,,Metastatic,lymph_node,Male,HSRRB,,JCRB1009,RERFGC1B_STOMACH,1240209.0,,285.0,,,MF-001-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000145,PT-LH2axx,SK-LMS-1,SKLMS1,43.0,Commercial,SIDM01109,CVCL_0628,LMS,Adult,Adherent,,Primary,soft_tissue,Female,ATCC,,HTB-88,SKLMS1_SOFT_TISSUE,909720.0,,1641.0,,,MF-015-001,None,LMS,Leiomyosarcoma,Leiomyosarcoma,Soft Tissue +ACH-000146,PT-Sv45MF,THP-1,THP1,1.0,Commercial,SIDM01172,CVCL_0006,AML,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,ATCC,M5,TIB-202,THP1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909771.0,,770.0,,,MF-001-006,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000147,PT-9WkxWW,T-47D,T47D,54.0,Commercial,SIDM00097,CVCL_0553,IDC,Adult,Adherent,luminal,Metastatic,pleural_effusion,Female,ATCC,ERpos_HER2neg,HTB-133,T47D_BREAST,905945.0,,1286.0,,,MF-001-045,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000148,PT-sW6DWH,Hs 578T,HS578T,74.0,Commercial,SIDM00135,CVCL_0332,BRCNOS,Adult,Adherent,basal_B,Primary,breast,Female,ATCC,ERneg_HER2neg,,HS578T_BREAST,905957.0,,655.0,,,MF-002-001,None,BRCNOS,"Breast Invasive Carcinoma, NOS",Invasive Breast Carcinoma,Breast +ACH-000149,PT-ombRgU,SK-N-SH,SKNSH,4.0,Commercial,SIDM01098,CVCL_0531,NBL,Pediatric,Adherent,,Metastatic,bone_marrow,Female,ATCC,,HTB-11,SKNSH_AUTONOMIC_GANGLIA,717431.0,,1165.0,,,MF-006-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000150,PT-H39843,HCC2935,HCC2935,39.0,Commercial,,CVCL_1265,LUAD,Adult,Adherent,,Primary,pleural_effusion,Male,ATCC,NSCLC_adenocarcinoma,CRL-2869,HCC2935_LUNG,,,,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000151,PT-t7KWtB,JM1,JM1,,Commercial,SIDM00689,CVCL_3532,BLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,ATCC,b_cell,CEL-10423,JM1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1327768.0,,2096.0,,,MF-005-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000152,PT-DK2CQc,M059K,M059K,33.0,Commercial,SIDM00639,CVCL_0401,GB,Adult,Adherent,,Primary,central_nervous_system,Male,ATCC,glioblastoma,CRL-2365,M059K_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-007-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000153,PT-TexA3V,NCI-H2052,NCIH2052,65.0,Commercial,SIDM00713,CVCL_1518,PLSMESO,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,,CRL-5915,NCIH2052_PLEURA,688058.0,,1485.0,,,MF-001-001,None,PLSMESO,"Pleural Mesothelioma, Sarcomatoid Type",Pleural Mesothelioma,Pleura +ACH-000154,PT-AJl2G5,Hs 888.T,HS888T,20.0,Commercial,SIDM01746,CVCL_0979,ZFIBBON,Adult,Adherent,,,fibroblast,Male,ATCC,,CRL-7622,HS888T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Bone",Non-Cancerous,Fibroblast +ACH-000155,PT-qPqCUF,SW 1990,SW1990,56.0,Commercial,SIDM01165,CVCL_1723,PAAD,Adult,Adherent,,Primary,spleen,Male,ATCC,exocrine_adenocarcinoma,CRL-2172,SW1990_PANCREAS,910907.0,,1912.0,,,MF-021-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000156,PT-yxisxt,MHH-CALL-4,MHHCALL4,10.0,Commercial,SIDM00376,CVCL_1410,BLL,Pediatric,Adherent,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,ACC-337,MHHCALL4_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908133.0,,2070.0,,,MF-001-020,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000157,PT-jcPkpq,A4/Fuk,A4FUK,52.0,Commercial,SIDM00502,CVCL_1064,DLBCLNOS,Adult,Suspension,,Primary,ascites,Female,JCRB,DLBCL,JCRB0097,A4FUK_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910934.0,,186.0,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000158,PT-mgmL7l,OCI-LY3,OCILY3,52.0,Academic lab,,CVCL_8800,ABC,Adult,Suspension,,Primary,bone_marrow,Male,Received from CCLE; originally academic lab,DLBCL,,OCILY3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,ABC,Activated B-cell Type,Non-Hodgkin Lymphoma,Lymphoid +ACH-000159,PT-T2g8EU,OS-RC-2,OSRC2,52.0,Commercial,SIDM00239,CVCL_1626,CCRCC,Adult,Adherent,,Primary,kidney,Male,RIKEN,,RCB0735,OSRC2_KIDNEY,909250.0,,1674.0,,,MF-001-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000160,PT-0GrZ0k,BT-12,BT12,0.0,Academic lab,,CVCL_M155,ATRT,Pediatric,Adherent,,,soft_tissue,Female,Roberts (St Jude Hospital),,,BT12_SOFT_TISSUE,,,,,,MF-002-001,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-000161,PT-G4xjbZ,COR-L105,CORL105,,Commercial,SIDM00513,CVCL_1138,LUAD,Unknown,Adherent,,Metastatic,pleural_effusion,Male,ECACC,NSCLC_adenocarcinoma,92031918,CORL105_LUNG,906805.0,,22.0,,,MF-001-018,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000162,PT-MGPf78,GA-10,GA10,41.0,Commercial,SIDM00854,CVCL_1222,BL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,ATCC,b_cell_burkitt,CRL-2392,GA10_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1303896.0,,1008.0,,,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000163,PT-llVV5F,SW579,SW579,59.0,Commercial,SIDM01167,CVCL_3603,HNSC,Adult,Adherent,,Primary,thyroid,Male,ATCC,,HTB-107,SW579_THYROID,,,,,,MF-002-001,None,HNSC,Head and Neck Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000164,PT-cHU83i,PANC-1,PANC1,56.0,Commercial,SIDM00610,CVCL_0480,PAAD,Adult,Adherent,,Primary,pancreas,Male,ATCC,exocrine_adenocarcinoma,CRL-1469,PANC1_PANCREAS,,,,,,MF-002-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000165,PT-EyHts5,Hs 751.T,HS751T,19.0,Commercial,SIDM01700,CVCL_0891,ZFIBLYM,Adult,Unknown,,,fibroblast,Male,ATCC,,,HS751T_FIBROBLAST,,Originally annotated as 'Lymphocyte' but after analysis we believe this line is a fibroblast.,,,,,None,,Fibroblast,Non-Cancerous,Fibroblast +ACH-000166,PT-BnqVL0,Kasumi-6,KASUMI6,64.0,Commercial,,CVCL_0614,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,ATCC,M2,CRL-2775,KASUMI6_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-023,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000167,PT-ghtKEp,KE-97,KE97,52.0,Commercial,,CVCL_3386,PCM,Adult,Mixed,,Metastatic,abdomen,Male,RIKEN,,RCB1435,KE97_STOMACH,,,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000168,PT-FTVcJW,NOMO-1,NOMO1,31.0,Commercial,SIDM00580,CVCL_1609,AMOL,Adult,Suspension,,Primary,bone_marrow,Female,HSRRB,M5,IFO50474,NOMO1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908451.0,,297.0,,,MF-001-001,None,AMOL,Acute Monoblastic/Monocytic Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000169,PT-TG4t9c,RD,RD,7.0,Commercial,SIDM00847,CVCL_1649,ERMS,Pediatric,Adherent,,Primary,soft_tissue,Female,ATCC,embryonal,CCl-136,RD_SOFT_TISSUE,909264.0,,1763.0,,,MF-002-001,None,ERMS,Embryonal Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-000170,PT-fkfBUv,PrEC LH,PRECLH,,Academic lab,,CVCL_V626,ZIMMEPCP,Unknown,Adherent,,,prostate,Male,Jesse Boehm (Broad),,,PRECLH_PROSTATE,,,,,,,None,,"Immortalized Epithelial Cells, Prostate",Non-Cancerous,Prostate +ACH-000171,PT-pJpjja,VMRC-RCZ,VMRCRCZ,,Commercial,SIDM00317,CVCL_1791,RCC,Unknown,Adherent,,Primary,kidney,Unknown,HSRRB,,JCRB0827,VMRCRCZ_KIDNEY,909781.0,,738.0,,,MF-015-001,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000172,PT-o2d0Va,TM-87,TM87,1.0,Academic lab,,CVCL_8001,ATRT,Pediatric,Adherent,,Metastatic,pleural_effusion,Male,Roberts (St Jude Hospital),,,TM87_SOFT_TISSUE,,,,,,MF-002-001,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-000173,PT-FarRYD,JHUEM-3,JHUEM3,60.0,Commercial,,CVCL_4657,UCEC,Adult,Adherent,,Primary,endometrium,Female,RIKEN,,RCB1552,JHUEM3_ENDOMETRIUM,,,,,,MF-007-018,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000174,PT-dTkV2T,CAL-62,CAL62,70.0,Commercial,SIDM00931,CVCL_1112,THAP,Adult,Adherent,,Primary,pleural_effusion,Female,DSMZ,anaplastic,448,CAL62_THYROID,906828.0,,1753.0,,,MF-002-001,None,THAP,Anaplastic Thyroid Cancer,Anaplastic Thyroid Cancer,Thyroid +ACH-000175,PT-8hjp6w,TE159T,TE159T,6.0,Commercial,SIDM01761,CVCL_1743,ZFIBSOF,Pediatric,Adherent,,,fibroblast,Male,ATCC,,,TE159T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Soft Tissue",Non-Cancerous,Fibroblast +ACH-000176,PT-wKL1PE,LOU-NH91,LOUNH91,64.0,Commercial,SIDM00341,CVCL_2104,LUSC,Adult,Adherent,,Primary,lung,Female,DSMZ,NSCLC_squamous,ACC 393,LOUNH91_LUNG,1298226.0,,1506.0,,,MF-001-021,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000177,PT-Noh10Y,NCI-H660,NCIH660,63.0,Commercial,SIDM01123,CVCL_1576,PRSCC,Adult,Mixed,,Metastatic,lymph_node,Male,ATCC,,,NCIH660_PROSTATE,1330975.0,,87.0,,,MF-001-015,None,PRSCC,Prostate Small Cell Carcinoma,Prostate Small Cell Carcinoma,Prostate +ACH-000178,PT-3ZZnoD,Hs 766T,HS766T,64.0,Commercial,SIDM00664,CVCL_0334,PAAD,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,exocrine_adenocarcinoma,HTB 134,HS766T_PANCREAS,1298141.0,,1843.0,,,MF-002-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000179,PT-zC9YC8,NCI-H1618,NCIH1618,55.0,Commercial,,CVCL_1480,SCLC,Adult,Suspension,,Metastatic,bone_marrow,Female,ATCC,,CRL-5879,NCIH1618_LUNG,,,,,,MF-007-010,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000180,PT-aCAmcw,Hs 839.T,HS839T,42.0,Commercial,SIDM01724,CVCL_0941,ZFIBSKI,Adult,Adherent,,,fibroblast,Female,ATCC,,CRL-7572,HS839T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Skin",Non-Cancerous,Fibroblast +ACH-000181,PT-UbMDmb,SCC-9,SCC9,25.0,Commercial,SIDM01080,CVCL_1685,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,ATCC,,CRL-1629,SCC9_UPPER_AERODIGESTIVE_TRACT,909709.0,,2054.0,,,MF-007-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000182,PT-n4Jzz1,SNU-869,SNU869,,Commercial,SIDM00159,CVCL_5101,AMPCA,Unknown,Mixed,,Primary,biliary_tract,Unknown,KCLB,extrahepatic,869,SNU869_BILIARY_TRACT,,,,,Unknown,MF-001-005,None,AMPCA,Ampullary Carcinoma,Ampullary Carcinoma,Ampulla of Vater +ACH-000183,PT-T1yBnE,L-363,L363,36.0,Commercial,SIDM00312,CVCL_1357,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,,ACC 49,L363_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,924239.0,,2224.0,,,MF-001-017,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000184,PT-QtFjoY,Hs 343.T,HS343T,47.0,Commercial,SIDM01590,CVCL_0726,ZFIBBRE,Adult,Adherent,,,fibroblast,Female,ATCC,,,HS343T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Breast",Non-Cancerous,Fibroblast +ACH-000185,PT-TanjHu,Hs 737.T,HS737T,10.0,Commercial,SIDM01703,CVCL_0878,ZFIBBON,Pediatric,Adherent,,,fibroblast,Female,ATCC,,CRL-7473,HS737T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Bone",Non-Cancerous,Fibroblast +ACH-000186,PT-w40Tnr,NCI-H2444,NCIH2444,,Commercial,SIDM00723,CVCL_1552,NSCLC,Unknown,Adherent,,Primary,lung,Male,ATCC,,CRL-5945,NCIH2444_LUNG,1298356.0,,1538.0,,,MF-001-001,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-000187,PT-bfVDxm,COR-L311,CORL311,63.0,Commercial,SIDM00509,CVCL_2412,SCLC,Adult,Suspension,,Primary,lung,Male,ECACC,,,CORL311_LUNG,687980.0,,1167.0,,,MF-001-003,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000188,PT-Iz4kXj,SCC-25,SCC25,70.0,Commercial,SIDM01082,CVCL_1682,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,ATCC,,CRL-1628,SCC25_UPPER_AERODIGESTIVE_TRACT,910701.0,,1419.0,,,MF-007-026,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000189,PT-yDBvIq,RCC10RGB,RCC10RGB,,Commercial,SIDM00235,CVCL_1647,RCC,Unknown,Adherent,,Primary,kidney,Male,RIKEN,,RCB1151,RCC10RGB_KIDNEY,909974.0,,1640.0,,,MF-002-001,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000190,PT-YCDBvf,HD-MY-Z,HDMYZ,29.0,Commercial,SIDM01063,CVCL_1273,AML,Adult,Adherent,,,pleural_effusion,Male,DSMZ,,ACC 346,HDMYZ_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907050.0,,883.0,,,MF-001-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000191,PT-Lc6cyf,BHT-101,BHT101,63.0,Commercial,SIDM00987,CVCL_1085,THAP,Adult,Adherent,,Metastatic,lymph_node,Female,DSMZ,papillary,279,BHT101_THYROID,906696.0,,672.0,,,MF-002-009,None,THAP,Anaplastic Thyroid Cancer,Anaplastic Thyroid Cancer,Thyroid +ACH-000192,PT-Vhzgp5,MFE-280,MFE280,77.0,Commercial,SIDM00335,CVCL_1405,UCEC,Adult,Adherent,,Primary,endometrium,Female,DSMZ,,ACC 410,MFE280_ENDOMETRIUM,908129.0,,1540.0,,,MF-041-002,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000193,PT-gADQdp,KARPAS-620,KARPAS620,77.0,Commercial,SIDM01006,CVCL_1823,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,,Discontinued,KARPAS620_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1327775.0,,184.0,,,MF-001-020,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000194,PT-RKnqyJ,Hs 934.T,HS934T,58.0,Commercial,,CVCL_1031,ZFIBSKI,Adult,Adherent,,Primary,fibroblast,Female,ATCC,,,HS934T_FIBROBLAST,,,,,,,None,,"Fibroblast, Skin",Non-Cancerous,Fibroblast +ACH-000195,PT-ZJgxZb,Set-2,SET2,71.0,Commercial,SIDM00397,CVCL_2187,AMKL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,DSMZ,,,SET2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,AMKL,Acute Megakaryoblastic Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000196,PT-ZerhVq,HCC1599,HCC1599,44.0,Commercial,SIDM00877,CVCL_1256,IDC,Adult,Suspension,basal_A,Primary,breast,Female,ATCC,ERneg_HER2neg,CRL-2331,HCC1599_BREAST,749713.0,,1264.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000197,PT-XChmHC,TALL-1,TALL1,28.0,Commercial,SIDM00370,CVCL_1736,ATLL,Adult,Suspension,,Primary,bone_marrow,Male,DSMZ,t_cell,521,TALL1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909762.0,,2218.0,,,MF-001-017,None,ATLL,Adult T-Cell Leukemia/Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000198,PT-FYT6ze,EOL-1,EOL1,33.0,Commercial,SIDM00277,CVCL_0258,CELNOS,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,M5,ACC 386,EOL1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906856.0,,426.0,,,MF-001-001,None,CELNOS,"Chronic Eosinophilic Leukemia, NOS",Myeloproliferative Neoplasms,Myeloid +ACH-000199,PT-B6GmiY,Hs 255.T,HS255T,46.0,Commercial,SIDM01613,CVCL_0707,ZFIBCOL,Adult,Adherent,,,fibroblast,Female,ATCC,,,HS255T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Colorectal",Non-Cancerous,Fibroblast +ACH-000200,PT-bkGAPG,NMC-G1,NMCG1,,Commercial,SIDM00575,CVCL_1608,GB,Unknown,Adherent,,Primary,central_nervous_system,Female,HSRRB,glioblastoma,,NMCG1_CENTRAL_NERVOUS_SYSTEM,908449.0,,650.0,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000201,PT-EY60tR,A-204,A204,1.0,Commercial,SIDM00798,CVCL_1058,ERMS,Pediatric,Adherent,,Primary,soft_tissue,Female,ATCC via Roberts (St. Jude's Hospital),,HTB-82,A204_SOFT_TISSUE,910784.0,,349.0,,,MF-023-001,None,ERMS,Embryonal Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-000202,PT-UB7otW,COLO-320,COLO320,55.0,Commercial,SIDM00071,CVCL_1989,COAD,Adult,Adherent,,Primary,large_intestine,Female,DSMZ,,ACC 144,COLO320_LARGE_INTESTINE,,,,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000203,PT-9PJrBN,NH-6,NH6,0.0,Commercial,,CVCL_1606,NBL,Pediatric,Adherent,MYCN_amp,Metastatic,autonomic_ganglia,Female,HSRRB,,,NH6_AUTONOMIC_GANGLIA,,,,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000204,PT-gN5ZVQ,LP-1,LP1,56.0,Commercial,SIDM00340,CVCL_0012,PCM,Adult,Mixed,,Primary,haematopoietic_and_lymphoid_tissue,Female,HSRRB,,Could not find on vendor site,LP1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907791.0,,1794.0,,,MF-005-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000205,PT-GiBvWu,PK-59,PK59,66.0,Commercial,,CVCL_4897,PAAD,Adult,Adherent,,Metastatic,liver,Female,JCRB,exocrine_adenocarcinoma,RCB1901,PK59_PANCREAS,,,,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000206,PT-vEZ2Aw,C8166,C8166,0.0,Commercial,SIDM00072,CVCL_1099,TLL,Fetus,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,Sigma-Aldrich,,88051601,C8166_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000207,PT-5QKbtV,Detroit 562,DETROIT562,,Commercial,SIDM00831,CVCL_1171,OPHSC,Unknown,Adherent,,Metastatic,pleural_effusion,Female,ATCC,pharynx,CCL-138,DETROIT562_UPPER_AERODIGESTIVE_TRACT,906837.0,,2075.0,,,MF-015-001,None,OPHSC,Oropharynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000208,PT-i3H4Hx,U-178,U178,56.0,Academic lab,,CVCL_A758,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,Linda Chin,glioblastoma,,U178_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-000209,PT-xTQ9GQ,SNU-1079,SNU1079,,Commercial,SIDM00164,CVCL_5008,IHCH,Unknown,Adherent,,Primary,biliary_tract,Male,KCLB,intrahepatic,SNU1079,SNU1079_BILIARY_TRACT,,,,,,MF-001-005,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-000210,PT-L8aHyf,CADO-ES1,CADOES1,19.0,Commercial,SIDM00961,CVCL_1103,ES,Adult,Suspension,EWS_ERG,Metastatic,pleural_effusion,Female,DSMZ,,ACC 255,CADOES1_BONE,753539.0,,1523.0,,,MF-001-001,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-000211,PT-5fvUg8,Daoy,DAOY,4.0,Commercial,SIDM00887,CVCL_1167,MBL,Pediatric,Adherent,non_MYC,Primary,central_nervous_system,Male,ATCC,,HTB-186,DAOY_CENTRAL_NERVOUS_SYSTEM,906833.0,,2150.0,,,MF-006-001,None,MBL,Medulloblastoma,Embryonal Tumor,CNS/Brain +ACH-000212,PT-y6HadC,CAL-120,CAL120,43.0,Commercial,SIDM00940,CVCL_1104,BRCA,Adult,Adherent,basal_B,Metastatic,pleural_effusion,Female,DSMZ,ERneg_HER2neg,ACC 459,CAL120_BREAST,906826.0,,1748.0,,,MF-002-001,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000213,PT-Fn6aO6,HUP-T4,HUPT4,60.0,Commercial,SIDM00531,CVCL_1300,PAAD,Adult,Adherent,,Metastatic,ascites,Male,DSMZ,exocrine_adenocarcinoma,AC 223,HUPT4_PANCREAS,907286.0,,618.0,,,MF-003-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000214,PT-R4JkKl,Hs 675.T,HS675T,,Commercial,SIDM01564,CVCL_0836,ZFIBCOL,Unknown,Adherent,,,fibroblast,Male,ATCC,,,HS675T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Colorectal",Non-Cancerous,Fibroblast +ACH-000215,PT-G8e35b,LN382,LN382,67.0,Academic lab,,CVCL_3956,GB,Adult,Adherent,,Primary,central_nervous_system,Male,Linda Chin,glioblastoma,Academic,LN382_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000216,PT-Y4syw7,JH-EsoAd1,JHESOAD1,66.0,Academic lab,,CVCL_8098,ESCA,Adult,Adherent,,,oesophagus,Male,,,,JHESOAD1_OESOPHAGUS,,,,,,MF-001-020,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000217,PT-YfFi4d,JHH-6,JHH6,57.0,Commercial,SIDM00615,CVCL_2788,HCC,Adult,Adherent,,Primary,liver,Female,HSRRB,,JCRB1030,JHH6_LIVER,1240159.0,,1824.0,,,MF-022-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000218,PT-ADoL4a,PL-21,PL21,24.0,Commercial,SIDM00450,CVCL_2161,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,M3,ACC 539,PL21_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330991.0,,698.0,,,MF-001-020,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000219,PT-3FxmoJ,A-375,A375,54.0,Commercial,SIDM00795,CVCL_0132,MEL,Adult,Adherent,,Primary,skin,Female,ATCC,,CRL-1619,A375_SKIN,906793.0,,953.0,,,MF-002-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000220,PT-WbLsVj,Mino,MINO,68.0,Commercial,,CVCL_1872,MCL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,ATCC,b_cell_mantle_cell,,MINO_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,MCL,Mantle Cell Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000221,PT-7v9ThA,SNU-398,SNU398,42.0,Commercial,SIDM01181,CVCL_0077,HCC,Adult,Adherent,,Primary,liver,Male,ATCC,,CRL-2233,SNU398_LIVER,1240217.0,,2169.0,,,MF-001-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000222,PT-y5xucl,AsPC-1,ASPC1,62.0,Commercial,SIDM00899,CVCL_0152,PAAD,Adult,Adherent,,Metastatic,ascites,Female,ATCC,exocrine_adenocarcinoma,CRL-1682,ASPC1_PANCREAS,910702.0,,59.0,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000223,PT-Vntr9y,HCC1937,HCC1937,24.0,Commercial,SIDM00874,CVCL_0290,IDC,Adult,Adherent,basal_A,Primary,breast,Female,ATCC,ERneg_HER2neg,CRL-2336,HCC1937_BREAST,749714.0,,936.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000224,PT-ethUtA,Hs 819.T,HS819T,60.0,Commercial,SIDM01699,CVCL_0928,ZFIBBON,Adult,Adherent,,,fibroblast,Male,ATCC,,,HS819T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Bone",Non-Cancerous,Fibroblast +ACH-000225,PT-0QAhIt,ECC12,ECC12,63.0,Commercial,SIDM00279,CVCL_1189,STSC,Adult,Adherent,,Primary,stomach,Male,RIKEN,,RCB1009,ECC12_STOMACH,906849.0,,2094.0,,,MF-001-001,None,STSC,Small Cell Carcinoma of the Stomach,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000226,PT-ktST3K,SUP-M2,SUPM2,5.0,Commercial,SIDM00421,CVCL_2209,ALCLALKP,Pediatric,Suspension,,,central_nervous_system,Female,DSMZ,t_cell_ALCL,,SUPM2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331040.0,,1878.0,,,MF-001-020,None,ALCLALKP,Anaplastic Large-Cell Lymphoma ALK Positive,Non-Hodgkin Lymphoma,Lymphoid +ACH-000227,PT-N9Xbr1,KP-N-YN,KPNYN,2.0,Commercial,SIDM00556,CVCL_1341,NBL,Pediatric,Adherent,MYCN_amp,Metastatic,lymph_node,Male,HSRRB,,IFO50431,KPNYN_AUTONOMIC_GANGLIA,907314.0,,1977.0,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000228,PT-HX0QLG,BICR 31,BICR31,,Commercial,SIDM00078,CVCL_2312,OCSC,Unknown,Adherent,,Primary,upper_aerodigestive_tract,Male,ECACC,oral,4072107,BICR31_UPPER_AERODIGESTIVE_TRACT,1290725.0,,940.0,,,MF-002-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000229,PT-DGfHIv,Hs 822.T,HS822T,9.0,Commercial,,CVCL_0933,ZFIBBON,Pediatric,Adherent,,Primary,fibroblast,Female,ATCC,,,HS822T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Bone",Non-Cancerous,Fibroblast +ACH-000230,PT-ZWtwNq,Hs 742.T,HS742T,71.0,Commercial,SIDM01701,CVCL_0888,ZFIBBRE,Adult,Adherent,,,fibroblast,Female,ATCC,,CRL-7482 BSL 1,HS742T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Breast",Non-Cancerous,Fibroblast +ACH-000231,PT-nIom71,KALS-1,KALS1,74.0,Commercial,SIDM00613,CVCL_1323,GB,Adult,Adherent,,Primary,central_nervous_system,Female,HSRRB,glioblastoma,IFO50434,KALS1_CENTRAL_NERVOUS_SYSTEM,907271.0,,1936.0,,,MF-001-014,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000232,PT-88IC1n,U-251 MG,U251MG,75.0,Commercial,SIDM00111,CVCL_0021,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,HSRRB,astrocytoma,JCRB1386,U251MG_CENTRAL_NERVOUS_SYSTEM,905983.0,,1913.0,,,MF-002-001,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-000233,PT-zshCzw,DEL,DEL,12.0,Commercial,SIDM00949,CVCL_1170,ALCLALKP,Pediatric,Suspension,,,pleural_effusion,Male,DSMZ,t_cell_ALCL,ACC 338,DEL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906836.0,,793.0,,,MF-001-001,None,ALCLALKP,Anaplastic Large-Cell Lymphoma ALK Positive,Non-Hodgkin Lymphoma,Lymphoid +ACH-000234,PT-A9d4DI,Caki-2,CAKI2,69.0,Commercial,,CVCL_0235,PRCC,Adult,Adherent,,Primary,kidney,Male,ATCC,clear_cell,HTB-47,CAKI2_KIDNEY,,,,,,MF-023-001,None,PRCC,Papillary Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000235,PT-zLTXv3,Panc 04.03,PANC0403,70.0,Commercial,SIDM01137,CVCL_1636,PAAD,Adult,Adherent,,Primary,pancreas,Male,ATCC,exocrine_adenocarcinoma,CRL-2555,PANC0403_PANCREAS,1298476.0,,2123.0,,,MF-001-043,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000236,PT-DDlBLT,SW1417,SW1417,53.0,Commercial,SIDM00812,CVCL_1717,COAD,Adult,Suspension,,Primary,Colon,Female,ATCC,,,SW1417_LARGE_INTESTINE,909747.0,,974.0,,,MF-021-002,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000237,PT-wwKJYr,JHOM-1,JHOM1,88.0,Commercial,,CVCL_4644,MOV,Adult,Adherent,,Primary,ovary,Female,RIKEN,mucinous,RCB1676,JHOM1_OVARY,,,,,,MF-007-018,None,MOV,Mucinous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000238,PT-Kf5TA3,SCC-4,SCC4,55.0,Commercial,SIDM01081,CVCL_1684,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,ATCC,oral,,SCC4_UPPER_AERODIGESTIVE_TRACT,910904.0,,1476.0,,,MF-007-022,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000239,PT-dhqDHo,HuG1-N,HUG1N,55.0,Commercial,,CVCL_4846,TSTAD,Adult,Mixed,,Metastatic,stomach,Male,RIKEN,tubular,RCB1179,HUG1N_STOMACH,,,,,,MF-001-001,None,TSTAD,Tubular Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000240,PT-I7SpWg,Hs 600.T,HS600T,,Commercial,,CVCL_0814,ZFIBSKI,Unknown,Adherent,,Primary,fibroblast,Male,ATCC,,,HS600T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Skin",Non-Cancerous,Fibroblast +ACH-000241,PT-0V5kh0,JK-1,JK1,58.0,Commercial,,CVCL_2079,CML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,blast_crisis,,JK1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-000242,PT-9zV4k1,RT4,RT4,63.0,Commercial,SIDM01085,CVCL_0036,BLCA,Adult,Adherent,,Primary,urinary_tract,Male,ATCC,bladder_transitional_cell,HTB-2,RT4_URINARY_TRACT,687455.0,,1309.0,,,MF-023-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000243,PT-dLpuzD,DAN-G,DANG,68.0,Commercial,SIDM00950,CVCL_0243,PAAD,Adult,Adherent,,Primary,pancreas,Female,DSMZ,exocrine_adenocarcinoma,ACC 249,DANG_PANCREAS,1290797.0,,871.0,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000244,PT-9fPvh2,DK-MG,DKMG,67.0,Commercial,SIDM00947,CVCL_1173,GB,Adult,Adherent,,Primary,central_nervous_system,Female,DSMZ,glioblastoma,ACC 277,DKMG_CENTRAL_NERVOUS_SYSTEM,906839.0,,1386.0,,,MF-001-003,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000245,PT-IrNAYx,BL-41,BL41,8.0,Commercial,SIDM00985,CVCL_1087,BL,Pediatric,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell_burkitt,,BL41_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910706.0,,737.0,,,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000246,PT-bLoo9u,SLR 23,SLR23,,Academic lab,,CVCL_V609,CCRCC,Unknown,Adherent,,Metastatic,kidney,Unknown,Bill Kaelin (DFCI),,,SLR23_KIDNEY,,,,,,MF-001-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000247,PT-JKf5mS,OCUM-1,OCUM1,38.0,Commercial,SIDM00568,CVCL_3084,DSTAD,Adult,Mixed,,Metastatic,stomach,Female,HSRRB,diffuse_gastric,,OCUM1_STOMACH,1298358.0,,1712.0,,,MF-002-001,None,DSTAD,Diffuse Type Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000248,PT-8CE6ah,AU565,AU565,43.0,Commercial,SIDM00898,CVCL_1074,BRCA,Adult,Adherent,HER2_amp,Metastatic,pleural_effusion,Female,ATCC,ERneg_HER2pos,CRL-2351,AU565_BREAST,910704.0,,726.0,,,MF-002-001,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000249,PT-hYUBUD,CL-11,CL11,,Commercial,SIDM00944,CVCL_1978,COAD,Unknown,Adherent,,Primary,Colon,Male,DSMZ,,ACC 467,CL11_LARGE_INTESTINE,1290769.0,,1153.0,,,MF-007-019,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000250,PT-66upm1,KMRC-20,KMRC20,,Commercial,SIDM00609,CVCL_2986,CCRCC,Unknown,Adherent,,Primary,kidney,Unknown,HSRRB,,JCRB1071,KMRC20_KIDNEY,1298169.0,,1515.0,,,MF-001-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000251,PT-l5gD1h,NCI-H2887,NCIH2887,31.0,Academic lab,,CVCL_5159,NSCLC,Adult,Adherent,,Primary,lung,Male,Meyerson (Broad) who received from Minna,,,NCIH2887_LUNG,,,,,,MF-001-001,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-000252,PT-XQHvQF,LS1034,LS1034,54.0,Commercial,SIDM00681,CVCL_1382,COAD,Adult,Adherent,,Primary,large_intestine,Male,ATCC,,CRL-2158,LS1034_LARGE_INTESTINE,917486.0,,1756.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000253,PT-BLAWlD,COLO 201,COLO201,70.0,Commercial,SIDM00823,CVCL_1987,COAD,Adult,Mixed,,Metastatic,ascites,Male,ATCC,,,COLO201_LARGE_INTESTINE,,,,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000254,PT-nowpOK,SCC-15,SCC15,55.0,Commercial,SIDM01083,CVCL_1681,OCSC,Adult,Adherent,,,upper_aerodigestive_tract,Male,ATCC,,,SCC15_UPPER_AERODIGESTIVE_TRACT,910911.0,,2053.0,,,MF-007-027,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000255,PT-cxJQjg,LMSU,LMSU,27.0,Commercial,,CVCL_4849,STAD,Adult,Adherent,,Metastatic,lymph_node,Female,RIKEN,,RCB1062,LMSU_STOMACH,,,,,,MF-004-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000256,PT-qexSkk,COV318,COV318,,Commercial,,CVCL_2419,HGSOC,Unknown,Adherent,,Metastatic,ascites,Female,ECACC,high_grade_serous,7071903,COV318_OVARY,,,,,,MF-006-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000257,PT-7LsK3v,COR-L279,CORL279,63.0,Commercial,SIDM00511,CVCL_1140,SCLC,Adult,Mixed,,Metastatic,lymph_node,Male,ECACC,,96020724,CORL279_LUNG,910937.0,,1768.0,,,MF-001-003,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000258,PT-XTyUEa,Du4475,DU4475,62.0,Commercial,SIDM01001,CVCL_1183,BRCA,Adult,Suspension,luminal_HER2_amp,Metastatic,skin,Female,ATCC,ERneg_HER2neg,HTB-123,DU4475_BREAST,906844.0,,302.0,,,MF-001-001,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000259,PT-S07K7h,KELLY,KELLY,1.0,Commercial,SIDM01009,CVCL_2092,NBL,Pediatric,Adherent,MYCN_amp,Primary,autonomic_ganglia,Female,DSMZ,,ACC 355,KELLY_AUTONOMIC_GANGLIA,753618.0,,225.0,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000260,PT-7WPGtR,SK-N-AS,SKNAS,6.0,Commercial,SIDM01101,CVCL_1700,NBL,Pediatric,Adherent,,Metastatic,bone_marrow,Female,ATCC,,CRL-2137,SKNAS_AUTONOMIC_GANGLIA,724828.0,,1480.0,,,MF-002-002,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000261,PT-9jciof,RERF-LC-AI,RERFLCAI,,Commercial,SIDM00307,CVCL_4402,LUSC,Unknown,Adherent,,Metastatic,pleural_effusion,Male,RIKEN,NSCLC_squamous,RCB0444,RERFLCAI_LUNG,,,,,,MF-006-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000262,PT-BYKJeS,UOK101,UOK101,,Academic lab,,CVCL_B076,CCRCC,Unknown,Adherent,,Primary,kidney,Female,Bill Kaelin (DFCI),,,UOK101_KIDNEY,,,,,,MF-002-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000263,PT-uzWVHa,KASUMI-1,KASUMI1,7.0,Commercial,SIDM01005,CVCL_0589,AML,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,M2,CRL-2724,KASUMI1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907275.0,,1196.0,,,MF-001-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000264,PT-T9nCW5,Calu-6,CALU6,61.0,Commercial,SIDM00921,CVCL_0236,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Female,ATCC,,HTB-56,CALU6_LUNG,724859.0,,1844.0,,,MF-006-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000265,PT-o1wR3t,KP-4,KP4,50.0,Commercial,SIDM00301,CVCL_1338,PAAD,Adult,Adherent,,Metastatic,ascites,Male,RIKEN,exocrine_adenocarcinoma,RCB1005,KP4_PANCREAS,753572.0,,708.0,,,MF-007-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000266,PT-UWtyIo,SNU-213,SNU213,65.0,Commercial,,CVCL_5034,PAAD,Adult,Adherent,,Primary,pancreas,Male,KCLB,exocrine_adenocarcinoma,213,SNU213_PANCREAS,,,,,,MF-001-003,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000267,PT-YdqP9d,HDLM-2,HDLM2,74.0,Commercial,SIDM01064,CVCL_0009,HL,Adult,Suspension,,,pleural_effusion,Male,DSMZ,,,HDLM2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,924110.0,,1510.0,,,MF-001-001,None,HL,Hodgkin Lymphoma,Hodgkin Lymphoma,Lymphoid +ACH-000268,PT-IrDGnP,SNU-245,SNU245,,Commercial,SIDM00162,CVCL_5038,EHCH,Unknown,Adherent,,Primary,biliary_tract,Unknown,KCLB,extrahepatic,00245,SNU245_BILIARY_TRACT,,,,,,MF-001-005,None,EHCH,Extrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-000269,PT-Qasynk,AM-38,AM38,36.0,Commercial,SIDM00492,CVCL_1070,GB,Adult,Adherent,,Primary,central_nervous_system,Male,HSRRB,glioblastoma,IFO50492,AM38_CENTRAL_NERVOUS_SYSTEM,910933.0,,776.0,,,MF-015-009,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000270,PT-htpobI,HPAC,HPAC,64.0,Commercial,SIDM00670,CVCL_3517,PAAD,Adult,Adherent,,Primary,pancreas,Female,ATCC,exocrine_adenocarcinoma,CRL-2119,HPAC_PANCREAS,1298136.0,,744.0,,,MF-007-028,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000271,PT-i02i7U,SU-DHL-10,SUDHL10,25.0,Commercial,SIDM00389,CVCL_1889,DLBCLNOS,Adult,Suspension,,Metastatic,pleural_effusion,Male,DSMZ,DLBCL,CRL-2963,SUDHL10_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331033.0,,269.0,,,MF-001-020,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000272,PT-cSAYbR,SLR 24,SLR24,,Academic lab,,CVCL_V610,CCRCC,Unknown,Adherent,,Primary,kidney,Unknown,Bill Kaelin (DFCI),,,SLR24_KIDNEY,,This line is an RCC4 derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,MF-001-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000273,PT-qWYBLI,SF539,SF539,34.0,Academic lab,SIDM00083,CVCL_1691,GSARC,Adult,Adherent,,Primary,central_nervous_system,Female,Garraway lab,,,SF539_CENTRAL_NERVOUS_SYSTEM,905984.0,,1781.0,,,MF-001-014,None,GSARC,Gliosarcoma,Diffuse Glioma,CNS/Brain +ACH-000274,PT-QbMSjm,Hs 852.T,HS852T,53.0,Commercial,,CVCL_0950,MEL,Adult,Adherent,,Primary,skin,Male,ATCC,,CRL-7585,HS852T_SKIN,,,,,,MF-002-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000275,PT-CaS06R,Hs 834.T,HS834T,27.0,Commercial,SIDM01709,CVCL_0938,ZFIBSKI,Adult,Unknown,,Metastatic,lymph_node,Female,ATCC (possibly academic collab),,,HS834T_FIBROBLAST,,,,,,,None,,"Fibroblast, Skin",Non-Cancerous,Fibroblast +ACH-000276,PT-S4bLNM,HCC38,HCC38,50.0,Commercial,SIDM00675,CVCL_1267,IDC,Adult,Adherent,basal_A,Primary,breast,Female,ATCC,ERneg_HER2neg,CRL-2314,HCC38_BREAST,749717.0,,1318.0,,,MF-020-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000277,PT-osxHUh,HCC1419,HCC1419,42.0,Commercial,SIDM00882,CVCL_1251,IDC,Adult,Adherent,HER2_amp,Primary,breast,Female,ATCC,ERpos_HER2pos,CRL-2326,HCC1419_BREAST,907045.0,,1551.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000278,PT-BexFYH,COV362,COV362,,Commercial,,CVCL_2420,HGSOC,Unknown,Adherent,,Metastatic,pleural_effusion,Female,ECACC,high_grade_serous,7071910,COV362_OVARY,,,,,,MF-002-003,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000279,PT-BpX01U,EWS502,EWS502,,Academic lab,,CVCL_S740,ES,Pediatric,Adherent,EWS_FLI,Primary,bone,Unknown,Marino-Enriquez (BWH),,,EWS502_BONE,,,,,,MF-001-018,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-000280,PT-S0isOw,SNU-840,SNU840,45.0,Commercial,,CVCL_5100,BTMOV,Adult,Adherent,,Primary,ovary,Female,KCLB,,840,SNU840_OVARY,,,,,,MF-001-001,None,BTMOV,"Brenner Tumor, Malignant",Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000281,PT-aIUMLY,KP-2,KP2,65.0,Commercial,SIDM00582,CVCL_3004,PAAD,Adult,Adherent,,Primary,pancreas,Female,HSRRB,exocrine_adenocarcinoma,JCRB0181,KP2_PANCREAS,1298218.0,,746.0,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000282,PT-tUaDvw,NCI-H1755,NCIH1755,65.0,Commercial,SIDM00738,CVCL_1492,LUAD,Adult,Mixed,,Metastatic,liver,Female,ATCC,NSCLC_adenocarcinoma,,NCIH1755_LUNG,908475.0,,1240.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000283,PT-jCV3Db,A1207,A1207,,Academic lab,,CVCL_8481,GB,Unknown,Adherent,,Primary,central_nervous_system,Female,Linda Chin,glioblastoma,,A1207_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000284,PT-LnFH3Z,Hs 840.T,HS840T,7.0,Commercial,SIDM01725,CVCL_0942,ZFIBUPA,Pediatric,Adherent,,,fibroblast,Male,ATCC,,,HS840T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Upper Aerodigestive",Non-Cancerous,Fibroblast +ACH-000285,PT-gL1kFD,Toledo,TOLEDO,,Commercial,,CVCL_3611,DLBCLNOS,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,ATCC,DLBCL,CRL-2631,TOLEDO_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000286,PT-eQWzKj,SNU-1033,SNU1033,45.0,Commercial,SIDM00192,CVCL_5002,READ,Adult,Adherent,,Primary,large_intestine,Female,KCLB,,,SNU1033_LARGE_INTESTINE,,,,,,MF-001-001,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000287,PT-dNbHpB,NU-DUL-1,NUDUL1,43.0,Commercial,SIDM00443,CVCL_1877,ABC,Adult,Suspension,,Metastatic,cerebrospinal_fluid ,Male,DSMZ,DLBCL,CRL-2969,NUDUL1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330982.0,,95.0,,Unknown,MF-001-017,None,ABC,Activated B-cell Type,Non-Hodgkin Lymphoma,Lymphoid +ACH-000288,PT-hgWgpg,BT-549,BT549,72.0,Commercial,SIDM00122,CVCL_1092,BRCNOS,Adult,Adherent,basal_B,Primary,breast,Female,ATCC,ERneg_HER2neg,HTB-122,BT549_BREAST,905951.0,,1835.0,,,MF-001-045,None,BRCNOS,"Breast Invasive Carcinoma, NOS",Invasive Breast Carcinoma,Breast +ACH-000289,PT-KlxS9l,SNU-466,SNU466,61.0,Commercial,,CVCL_5064,GB,Adult,Adherent,,Primary,central_nervous_system,Male,KCLB,glioblastoma,466,SNU466_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-001-005,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000290,PT-DzY90c,NCI-H209,NCIH209,55.0,Commercial,SIDM00706,CVCL_1525,SCLC,Adult,Suspension,,Metastatic,bone_marrow,Male,ATCC,,,NCIH209_LUNG,688013.0,,452.0,,,MF-001-020,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000291,PT-MtLxSF,OV-90,OV90,64.0,Commercial,SIDM01141,CVCL_3768,SOC,Adult,Adherent,,Metastatic,ascites,Female,ATCC,high_grade_serous,CRL-11732,OV90_OVARY,1240197.0,,1327.0,,,,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000292,PT-x8fAhk,NCI-H841,NCIH841,51.0,Commercial,SIDM01134,CVCL_1595,SCLC,Adult,Adherent,,Metastatic,lung,Male,ATCC,,CRL-5845,NCIH841_LUNG,1240192.0,,1372.0,,,MF-007-010,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000293,PT-tjaCAG,KLE,KLE,68.0,Commercial,SIDM00686,CVCL_1329,UCEC,Adult,Adherent,,Primary,endometrium,Female,ATCC,,CRl-1622,KLE_ENDOMETRIUM,924187.0,,2256.0,,,MF-007-001,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000294,PT-ogTwsS,NB-4,NB4,23.0,Commercial,SIDM00428,CVCL_0005,AML,Adult,Suspension,,Primary,bone_marrow,Female,DSMZ,M3,ACC 207,NB4_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1323913.0,,1285.0,,,MF-001-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000295,PT-PfwDZx,EM-2,EM2,5.0,Commercial,SIDM01047,CVCL_1196,CMLBCRABL1,Pediatric,Suspension,,,bone_marrow,Female,DSMZ,blast_crisis,ACC 135,EM2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906855.0,,901.0,,,MF-001-001,None,CMLBCRABL1,"Chronic Myeloid Leukemia, BCR-ABL1+",Myeloproliferative Neoplasms,Myeloid +ACH-000296,PT-GezIUF,OUMS-23,OUMS23,37.0,Commercial,SIDM00036,CVCL_3088,COAD,Adult,Adherent,,Metastatic,pericardial_effusion,Male,HSRRB,,JCRB1022,OUMS23_LARGE_INTESTINE,,,,,,MF-002-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000297,PT-0Ds3by,NCI-H889,NCIH889,69.0,Commercial,,CVCL_1598,SCLC,Adult,Suspension,,Metastatic,lymph_node,Female,ATCC,,CRL-5817,NCIH889_LUNG,,,,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000298,PT-2tJBcj,NCI-H2029,NCIH2029,69.0,Commercial,SIDM00735,CVCL_1516,SCLC,Adult,Adherent,,Metastatic,lymph_node,Female,ATCC,,,NCIH2029_LUNG,688011.0,,2106.0,,,MF-002-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000299,PT-OEqvYu,HNT-34,HNT34,47.0,Academic lab,,CVCL_2071,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,,M4,,HNT34_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000300,PT-QvcrZr,SLR 25,SLR25,,Academic lab,,CVCL_V611,CCRCC,Unknown,Adherent,,Metastatic,kidney,Unknown,Bill Kaelin (DFCI),,,SLR25_KIDNEY,,,,,,,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000301,PT-qTtBxS,LAMA-84,LAMA84,29.0,Commercial,SIDM00346,CVCL_0388,CML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,blast_crisis,ACC 168,LAMA84_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907783.0,,709.0,,,MF-001-001,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-000302,PT-SeH5WZ,SNU-1077,SNU1077,60.0,Commercial,SIDM00166,CVCL_5007,UCS,Adult,Adherent,,Primary,endometrium,Female,KCLB,,1077,SNU1077_ENDOMETRIUM,,,,,,MF-001-001,None,UCS,Uterine Carcinosarcoma/Uterine Malignant Mixed Mullerian Tumor,Endometrial Carcinoma,Uterus +ACH-000303,PT-7cPLvN,SNU-5,SNU5,33.0,Commercial,SIDM01144,CVCL_0078,STAD,Adult,Suspension,,Metastatic,ascites,Female,ATCC,,,SNU5_STOMACH,908445.0,,28.0,,,MF-005-004,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000304,PT-JAyPtz,WM-115,WM115,55.0,Commercial,SIDM01000,CVCL_0040,MEL,Adult,Adherent,,Metastatic,skin,Female,ATCC,,,WM115_SKIN,909784.0,,1000.0,,,MF-006-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000305,PT-iltdpC,EC-GI-10,ECGI10,65.0,Commercial,SIDM00278,CVCL_1187,ESCC,Adult,Adherent,,,lymph_node,Male,RIKEN,,RCB0774,ECGI10_OESOPHAGUS,753555.0,,2138.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000306,PT-CqYJd5,Hs 688(A).T,HS688AT,69.0,Commercial,,CVCL_0846,ZFIBSKI,Adult,Adherent,,Primary,fibroblast,Male,ATCC,,CRL-7425,HS688AT_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Skin",Non-Cancerous,Fibroblast +ACH-000307,PT-rg0sYD,PK-1,PK1,,Commercial,,CVCL_4717,PAAD,Unknown,Adherent,,Metastatic,liver,Male,RIKEN,exocrine_adenocarcinoma,RCB1972,PK1_PANCREAS,,,,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000308,PT-cdCVJ4,EFO-21,EFO21,56.0,Commercial,SIDM01052,CVCL_0029,SOC,Adult,Adherent,,Metastatic,ascites,Female,DSMZ,clear_cell,ACC 235,EFO21_OVARY,911905.0,,303.0,,,MF-001-047,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000309,PT-9oyPuO,SK-LU-1,SKLU1,60.0,Commercial,SIDM01108,CVCL_0629,LUAD,Adult,Adherent,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,HTB-57,SKLU1_LUNG,909721.0,,233.0,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000310,PT-2Urqss,IMR-32,IMR32,1.0,Commercial,SIDM00226,CVCL_0346,NBL,Pediatric,Adherent,MYCN_amp,Metastatic,abdomen,Male,ATCC,,,IMR32_AUTONOMIC_GANGLIA,,,,,,MF-006-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000311,PT-6IoG5q,NCI-H2122,NCIH2122,46.0,Commercial,SIDM00702,CVCL_1531,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Female,ATCC,NSCLC_adenocarcinoma,CRL-5985,NCIH2122_LUNG,722046.0,,1015.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000312,PT-k4Daz3,SK-N-BE(2),SKNBE2,2.0,Commercial,SIDM00894,CVCL_0528,NBL,Pediatric,Adherent,MYCN_amp,Metastatic,bone_marrow,Male,ATCC,,CRL-2271,SKNBE2_AUTONOMIC_GANGLIA,,,,,,MF-027-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000313,PT-Hd1kAu,KMRC-3,KMRC3,,Commercial,,CVCL_2985,CCRCC,Adult,Adherent,,Primary,kidney,Male,HSRRB,clear_cell,JCRB1012,KMRC3_KIDNEY,,,,,,MF-002-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000314,PT-HLJ5qp,HCC-2108,HCC2108,59.0,Commercial,,CVCL_A352,LUAD,Adult,Adherent,,Primary,lung,Male,KCLB,NSCLC_adenocarcinoma,72108,HCC2108_LUNG,,,,,,MF-001-005,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000315,PT-lrPA2x,KARPAS-422,KARPAS422,73.0,Commercial,SIDM01008,CVCL_1325,DLBCLNOS,Adult,Suspension,,Metastatic,pleural_effusion,Female,DSMZ,DLBCL,ACC 32,KARPAS422_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907274.0,,1973.0,,,MF-001-020,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000316,PT-f7BtKr,SNU-886,SNU886,57.0,Commercial,,CVCL_5103,HCC,Adult,Adherent,,Primary,liver,Male,KCLB,,886,SNU886_LIVER,,,,,,MF-001-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000317,PT-ARX9yV,TUHR14TKB,TUHR14TKB,,Commercial,,CVCL_5953,RCC,Unknown,Adherent,,Primary,kidney,Male,RIKEN,,RCB1383,TUHR14TKB_KIDNEY,,,,,,MF-001-001,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000318,PT-8hgOdH,TE-10,TE10,58.0,Commercial,SIDM00349,CVCL_1760,ESCC,Adult,Adherent,,Primary,oesophagus,Male,RIKEN,,RCB2099,TE10_OESOPHAGUS,753622.0,,1561.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000319,PT-5z2CJx,MPP 89,MPP89,67.0,,SIDM00222,CVCL_1427,PLEMESO,Adult,Adherent,,,pleural_effusion,Male,ICLC,,HTL00012,MPP89_PLEURA,908150.0,,2255.0,,,MF-002-001,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-000320,PT-tXqEg0,PSN1,PSN1,36.0,Commercial,SIDM00469,CVCL_1644,PAAD,Adult,Adherent,,Primary,pancreas,Male,ECACC,exocrine_adenocarcinoma,94060601,PSN1_PANCREAS,910546.0,,560.0,,,MF-001-003,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000321,PT-vvBnLH,MOLM-6,MOLM6,44.0,Commercial,,CVCL_2122,CML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,blast_crisis,,MOLM6_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-000322,PT-czDcsE,HT-144,HT144,29.0,Commercial,SIDM00695,CVCL_0318,MEL,Adult,Adherent,,Metastatic,skin,Male,ATCC,,HTB-63,HT144_SKIN,907067.0,,1193.0,,,MF-023-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000323,PT-PE7kNG,42-MG-BA,42MGBA,63.0,Commercial,SIDM00982,CVCL_1798,GB,Adult,Adherent,,Primary,central_nervous_system,Male,DSMZ,astrocytoma,ACC 431,42MGBA_CENTRAL_NERVOUS_SYSTEM,687561.0,,1465.0,,,MF-041-003,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000324,PT-CrEQoF,JHOC-5,JHOC5,47.0,Commercial,,CVCL_4640,CCOV,Adult,Adherent,,Primary,ovary,Female,RIKEN,clear_cell,RCB1520,JHOC5_OVARY,,,,,,MF-007-018,None,CCOV,Clear Cell Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000325,PT-Du1wuZ,SNU-620,SNU620,59.0,Commercial,,CVCL_5079,STAD,Adult,Suspension,,Metastatic,ascites,Female,KCLB,,,SNU620_STOMACH,,,,,,MF-001-005,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000326,PT-mEKuqA,JURL-MK1,JURLMK1,73.0,Commercial,SIDM01015,CVCL_2086,CML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,blast_crisis,ACC 532,JURLMK1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1327771.0,,1807.0,,,MF-001-001,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-000327,PT-oKf5lW,NCI-H1395,NCIH1395,55.0,Commercial,SIDM00644,CVCL_1467,LUAD,Adult,Adherent,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,CRL-5868,NCIH1395_LUNG,684681.0,,1826.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000328,PT-EuirKR,LN-215,LN215,60.0,Academic lab,,CVCL_3954,GB,Adult,Adherent,,Primary,central_nervous_system,Female,Linda Chin,glioblastoma,,LN215_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000329,PT-GKdkIC,CCF-STTG1,CCFSTTG1,68.0,Commercial,SIDM00131,CVCL_1118,ASTR,Adult,Adherent,,Primary,central_nervous_system,Female,ATCC,astrocytoma,CRL - 1718,CCFSTTG1_CENTRAL_NERVOUS_SYSTEM,906823.0,,876.0,,,MF-001-001,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-000330,PT-ykXL80,EFM-19,EFM19,50.0,Commercial,SIDM01056,CVCL_0253,IDC,Adult,Adherent,luminal,Metastatic,pleural_effusion,Female,DSMZ,ERpos_HER2neg,ACC 321,EFM19_BREAST,906851.0,,1786.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000331,PT-ThvuiE,IST-MES2,ISTMES2,71.0,,,CVCL_1312,PLEMESO,Adult,Adherent,,,pleural_effusion,Male,ICLC,,HTL01007,ISTMES2_PLEURA,,,,,,MF-002-012,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-000332,PT-Lio3jT,YAPC,YAPC,43.0,Commercial,SIDM00411,CVCL_1794,PAAD,Adult,Adherent,,Metastatic,ascites,Male,DSMZ,exocrine_adenocarcinoma,ACC 382,YAPC_PANCREAS,909904.0,,895.0,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000333,PT-60XjJv,JHOM-2B,JHOM2B,56.0,Commercial,,CVCL_4645,MOV,Adult,Adherent,,Primary,ovary,Female,RIKEN,mucinous,RCB1682,JHOM2B_OVARY,,,,,,MF-002-002,None,MOV,Mucinous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000334,PT-mgfMcU,DB,DB,45.0,Commercial,SIDM00886,CVCL_1168,DLBCLNOS,Adult,Suspension,,Metastatic,ascites,Male,ATCC,DLBCL,CRL-2289,DB_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906832.0,,1185.0,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000335,PT-MFqmhR,MSTO-211H,MSTO211H,62.0,Commercial,SIDM00640,CVCL_1430,PLBMESO,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,,CRL-2081,MSTO211H_PLEURA,908152.0,,209.0,,,MF-001-001,None,PLBMESO,"Pleural Mesothelioma, Biphasic Type",Pleural Mesothelioma,Pleura +ACH-000336,PT-0F4qCF,OCI-AML3,OCIAML3,57.0,Commercial,SIDM00462,CVCL_1844,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,M4,ACC 582,OCIAML3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1290455.0,,355.0,,,MF-003-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000337,PT-0fXDWz,NCI-H3122,NCIH3122,,Academic lab,SIDM00137,CVCL_5160,LUAD,Unknown,Adherent,,Primary,lung,Male,Meyerson (Broad) who received from Minna,NSCLC_adenocarcinoma,,NCIH3122_LUNG,1240190.0,,918.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000338,PT-khOMVk,SR-786,SR786,11.0,Commercial,SIDM00096,CVCL_1711,ALCLALKP,Pediatric,Suspension,,Primary,pleural_effusion,Male,DSMZ,t_cell_ALCL,ACC 369,SR786_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,905965.0,,794.0,,,MF-001-017,None,ALCLALKP,Anaplastic Large-Cell Lymphoma ALK Positive,Non-Hodgkin Lymphoma,Lymphoid +ACH-000339,PT-IP75QA,HCC-461,HCC461,69.0,Academic lab,,CVCL_5135,LUAD,Adult,Adherent,,Primary,lung,Male,Meyerson (Broad) who received from Minna,NSCLC_adenocarcinoma,,HCC461_LUNG,,,,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000340,PT-O6FqYe,Hs 870.T,HS870T,22.0,Commercial,SIDM01749,CVCL_0966,ZFIBBON,Adult,Adherent,,,fibroblast,Male,ATCC,,CRL-7606,HS870T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Bone",Non-Cancerous,Fibroblast +ACH-000341,PT-I4N9IW,SK-N-FI,SKNFI,11.0,Commercial,SIDM01099,CVCL_1702,NBL,Pediatric,Adherent,,Metastatic,bone_marrow,Male,ATCC,,CRL-2142,SKNFI_AUTONOMIC_GANGLIA,688087.0,,227.0,,,MF-002-002,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000342,PT-p9FCOx,CL-14,CL14,,Commercial,,CVCL_1979,COAD,Unknown,Adherent,,Primary,large_intestine,Male,DSMZ,,,CL14_LARGE_INTESTINE,,,,,,MF-007-019,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000343,PT-6ukZx4,NCI-H522,NCIH522,58.0,Commercial,SIDM00116,CVCL_1567,LUAD,Adult,Adherent,,Primary,lung,Male,ATCC,NSCLC_adenocarcinoma,CRL-5810,NCIH522_LUNG,905944.0,,1224.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000344,PT-KDacEe,SNU-668,SNU668,63.0,Commercial,,CVCL_5081,DSTAD,Adult,Adherent,,Metastatic,ascites,Male,KCLB,diffuse_gastric,00668,SNU668_STOMACH,,,,,,MF-001-005,None,DSTAD,Diffuse Type Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000345,PT-LZIxuV,KP-N-RT-BM-1,KPNRTBM1,1.0,Commercial,SIDM00557,CVCL_1339,NBL,Pediatric,Mixed,MYCN_amp,Metastatic,bone_marrow,Female,HSRRB,,,KPNRTBM1_AUTONOMIC_GANGLIA,924189.0,,852.0,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000346,PT-Qpiidf,JVM-3,JVM3,73.0,Commercial,SIDM01012,CVCL_1320,BPLL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,ACC 18,JVM3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907270.0,,1632.0,,,MF-001-001,None,BPLL,B-Cell Prolymphocytic Leukemia,Non-Hodgkin Lymphoma,Lymphoid +ACH-000347,PT-J6GNwJ,QGP-1,QGP1,61.0,Commercial,SIDM00360,CVCL_3143,PANET,Adult,Adherent,,Primary,pancreas,Male,HSRRB,somatostatinoma,JCRB0183,QGP1_PANCREAS,1298534.0,,469.0,,,MF-001-001,None,PANET,Pancreatic Neuroendocrine Tumor,Pancreatic Neuroendocrine Tumor,Pancreas +ACH-000348,PT-xMEDHc,RPMI-7951,RPMI7951,18.0,Commercial,SIDM01087,CVCL_1666,MEL,Adult,Adherent,,Metastatic,lymph_node,Female,ATCC,,HTB-66,RPMI7951_SKIN,910903.0,,1909.0,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000349,PT-nuy7MI,HCC1500,HCC1500,32.0,Commercial,SIDM00879,CVCL_1254,DCIS,Adult,Adherent,luminal,Primary,breast,Female,ATCC,ERpos_HER2neg,CRL-2329,HCC1500_BREAST,1303900.0,,653.0,,,MF-001-001,None,DCIS,Breast Ductal Carcinoma In Situ,Breast Ductal Carcinoma In Situ,Breast +ACH-000350,PT-j0XD5z,COLO-678,COLO678,69.0,Commercial,SIDM00957,CVCL_1129,COAD,Adult,Adherent,,Metastatic,lymph_node,Male,DSMZ,,ACC 194,COLO678_LARGE_INTESTINE,910689.0,,2148.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000351,PT-jfdGU1,MKN1,MKN1,72.0,Commercial,SIDM00271,CVCL_1415,STAS,Adult,Adherent,,Metastatic,lymph_node,Male,HSRRB,,JCRB0252,MKN1_STOMACH,908138.0,,1647.0,,,MF-001-001,None,STAS,Adenosquamous Carcinoma of the Stomach,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000352,PT-jBpXJh,HCC1428,HCC1428,49.0,Commercial,SIDM00881,CVCL_1252,BRCA,Adult,Adherent,luminal,Metastatic,pleural_effusion,Female,ATCC,ERpos_HER2neg,CRL - 2327,HCC1428_BREAST,1290905.0,,1567.0,,,MF-001-001,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000353,PT-h9Imcs,TE-15,TE15,58.0,Commercial,SIDM00249,CVCL_1763,ESCC,Adult,Adherent,,Primary,oesophagus,Female,RIKEN,,RCB1951,TE15_OESOPHAGUS,753614.0,,575.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000354,PT-MDCOET,Capan-1,CAPAN1,40.0,Commercial,SIDM00934,CVCL_0237,PAAD,Adult,Adherent,,Metastatic,liver,Male,ATCC,exocrine_adenocarcinoma,HTB-79,CAPAN1_PANCREAS,753624.0,,641.0,,,MF-005-004,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000355,PT-TQn0DO,NCI-H82,NCIH82,41.0,Commercial,SIDM01131,CVCL_1591,SCLC,Adult,Mixed,,Metastatic,pleural_effusion,Male,ATCC,,HTB - 175,NCIH82_LUNG,688031.0,,1545.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000356,PT-cE9wYI,MKN-45,MKN45,62.0,Commercial,SIDM00247,CVCL_0434,DSTAD,Adult,Adherent,,Metastatic,liver,Female,HSRRB,diffuse_gastric,JCRB0254,MKN45_STOMACH,925340.0,,1542.0,,,MF-001-001,None,DSTAD,Diffuse Type Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000357,PT-97FBgP,JeKo-1,JEKO1,78.0,Commercial,SIDM01038,CVCL_1865,MCL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,DSMZ,b_cell_mantle_cell,ACC 553,JEKO1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1327765.0,,2118.0,,,MF-001-020,None,MCL,Mantle Cell Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000358,PT-XQlkPK,NCI-H69,NCIH69,55.0,Commercial,SIDM01121,CVCL_1579,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Male,ATCC,,HTB-119,NCIH69_LUNG,688027.0,,1016.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000359,PT-qWqYVi,MG-63,MG63,14.0,Commercial,SIDM00525,CVCL_0426,OS,Pediatric,Adherent,,Primary,bone,Male,ATCC,,CRL -1428,MG63_BONE,908131.0,,2170.0,,,MF-015-001,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-000360,PT-M0lnCb,NCI-H508,NCIH508,55.0,Commercial,SIDM00777,CVCL_1564,COAD,Adult,Mixed,,Metastatic,abdomen,Male,ATCC,,CCL,NCIH508_LARGE_INTESTINE,908442.0,,35.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000361,PT-sPLV6L,SK-HEP-1,SKHEP1,52.0,Commercial,SIDM01110,CVCL_0525,HCC,Adult,Adherent,,Metastatic,ascites,Male,ATCC,,HTB-52,SKHEP1_LIVER,909719.0,,874.0,,,MF-006-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000362,PT-H3wdRq,MOLM-13,MOLM13,20.0,Commercial,SIDM00437,CVCL_2119,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,,ACC 554,MOLM13_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330947.0,,747.0,,,MF-001-020,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000363,PT-35DpVF,SK-MM-2,SKMM2,54.0,Commercial,SIDM00391,CVCL_1699,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,,ACC 430,SKMM2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,753612.0,,1003.0,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000364,PT-WN1oZd,U-2 OS,U2OS,15.0,Commercial,SIDM01191,CVCL_0042,OS,Pediatric,Adherent,,Primary,bone,Female,ATCC,,HTB-96,U2OS_BONE,909776.0,,1145.0,,,MF-023-001,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-000365,PT-I24dRR,SU-DHL-4,SUDHL4,38.0,Commercial,SIDM00405,CVCL_0539,DLBCLNOS,Adult,Suspension,,Metastatic,pleural_effusion,Male,DSMZ,DLBCL,CRL-2957,SUDHL4_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331035.0,,1450.0,,,MF-001-020,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000366,PT-lIgcxS,SK-N-DZ,SKNDZ,2.0,Commercial,SIDM01100,CVCL_1701,NBL,Pediatric,Adherent,MYCN_amp,Metastatic,bone_marrow,Female,ATCC,,CRL-2149,SKNDZ_AUTONOMIC_GANGLIA,688086.0,,867.0,,,MF-002-002,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000367,PT-hfcpvz,NCI-H226,NCIH226,,Commercial,SIDM00139,CVCL_1544,PLEMESO,Unknown,Adherent,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_squamous,CRL-5826,NCIH226_LUNG,905941.0,,1221.0,,,MF-001-001,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-000368,PT-U0kXHW,SNU-1105,SNU1105,61.0,Commercial,,CVCL_5010,GB,Adult,Adherent,,Primary,central_nervous_system,Male,KCLB,glioblastoma,1105,SNU1105_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-001-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000369,PT-sUmz7V,MOLM-16,MOLM16,77.0,Commercial,SIDM00435,CVCL_2120,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,,ACC 555,MOLM16_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330948.0,,1229.0,,,MF-001-020,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000370,PT-HHIjR4,SNU-626,SNU626,65.0,Commercial,,CVCL_5080,GB,Adult,Adherent,,Primary,central_nervous_system,Male,KCLB,glioblastoma,,SNU626_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-001-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000371,PT-B4jW32,RL,RL,52.0,Commercial,SIDM01089,CVCL_1660,DLBCLNOS,Adult,Suspension,,Metastatic,ascites,Male,ATCC,b_cell,CRL-2261,RL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910861.0,,1273.0,,Unknown,MF-001-020,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000372,PT-n3wTBx,P12-ICHIKAWA,P12ICHIKAWA,7.0,Commercial,SIDM00463,CVCL_1630,TLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,t_cell,34,P12ICHIKAWA_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909251.0,,2153.0,,,MF-001-001,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000373,PT-8qF7hQ,SKM-1,SKM1,76.0,Commercial,SIDM00380,CVCL_0098,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,HSRRB,,JCRB0118,SKM1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909722.0,,304.0,,,MF-001-020,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000374,PT-UPBMOO,HCC1143,HCC1143,52.0,Commercial,SIDM00866,CVCL_1245,IDC,Adult,Adherent,basal_A,Primary,breast,Female,ATCC,ERneg_HER2neg,CRL-2321,HCC1143_BREAST,749710.0,,1316.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000375,PT-U7nXm3,G-402,G402,0.0,Commercial,SIDM00855,CVCL_1221,RCC,Pediatric,Adherent,,Primary,kidney,Female,ATCC,,CRL-1440,G402_SOFT_TISSUE,907298.0,,1089.0,,,MF-023-001,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000376,PT-O9gP17,SF-295,SF295,67.0,Academic lab,SIDM00084,CVCL_1690,GB,Adult,Adherent,,Primary,central_nervous_system,Female,NCI/DCTD,glioblastoma,C0005005,SF295_CENTRAL_NERVOUS_SYSTEM,905985.0,,1164.0,,,MF-001-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000377,PT-gf9GtH,SNU-478,SNU478,,Commercial,SIDM00160,CVCL_5065,AMPCA,Unknown,Adherent,,Primary,biliary_tract,Unknown,KCLB,extrahepatic,00478,SNU478_BILIARY_TRACT,,,,,Unknown,MF-001-005,None,AMPCA,Ampullary Carcinoma,Ampullary Carcinoma,Ampulla of Vater +ACH-000378,PT-svCGFs,NCI-H647,NCIH647,56.0,Commercial,SIDM01125,CVCL_1574,LUAS,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_adenosquamous,CRL-5834,NCIH647_LUNG,1240191.0,,955.0,,,MF-001-001,None,LUAS,Lung Adenosquamous Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000379,PT-ZMox9l,NCI-H1781,NCIH1781,66.0,Commercial,SIDM00754,CVCL_1494,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Female,ATCC,NSCLC_adenocarcinoma,CRL-5894,NCIH1781_LUNG,1298350.0,,2228.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000380,PT-n47XwC,KMS-12-BM,KMS12BM,64.0,Commercial,SIDM01020,CVCL_1334,PCM,Adult,Suspension,,Primary,bone_marrow,Female,DSMZ,,ACC 551,KMS12BM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907281.0,,2087.0,,,MF-001-020,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000381,PT-3aeu41,T84,T84,72.0,Commercial,SIDM00782,CVCL_0555,COAD,Adult,Adherent,,Metastatic,lung,Male,ATCC,,CCL-248,T84_LARGE_INTESTINE,909761.0,,997.0,,,MF-007-008,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000382,PT-LoagR0,COR-L24,CORL24,71.0,Commercial,,CVCL_2409,SCLC,Adult,Suspension,,Metastatic,lymph_node,Male,ECACC,,,CORL24_LUNG,,,,,,MF-001-003,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000383,PT-MSH6ZN,OE33,OE33,73.0,,SIDM00477,CVCL_0471,ESCA,Adult,Adherent,,Primary,oesophagus,Female,HPACC,,OE33,OE33_OESOPHAGUS,910549.0,,1554.0,,,MF-001-001,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000384,PT-9PFG4H,SW 780,SW780,80.0,Commercial,SIDM01160,CVCL_1728,BLCA,Adult,Adherent,,Primary,urinary_tract,Female,ATCC,bladder_transitional_cell,CRL-2169,SW780_URINARY_TRACT,687457.0,,2039.0,,,MF-021-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000385,PT-0eAoS2,SK-RC-20,SKRC20,46.0,Academic lab,,CVCL_V605,RCC,Adult,Adherent,,Primary,kidney,Male,Bill Kaelin (DFCI),,,SKRC20_KIDNEY,,,,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000386,PT-7cCzYA,KG-1,KG1,59.0,Commercial,SIDM00785,CVCL_0374,AML,Adult,Suspension,,Primary,bone_marrow,Male,ATCC,,CCL-246,KG1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907278.0,,193.0,,,MF-005-004,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000387,PT-JUL0sC,TF-1,TF1,35.0,Commercial,,CVCL_0559,AML,Adult,Suspension,,,bone_marrow,Male,ATCC,,CRL-2003,TF1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-048,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000388,PT-U7LNgP,NU-DHL-1,NUDHL1,73.0,Commercial,,CVCL_1876,DLBCLNOS,Adult,Suspension,,Metastatic,lymph_node,Male,DSMZ,DLBCL,ACC 583,NUDHL1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000389,PT-9RF4Fl,H4,H4,37.0,Commercial,SIDM00852,CVCL_1239,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,ATCC,,HTB-148,H4_CENTRAL_NERVOUS_SYSTEM,907042.0,,1244.0,,,MF-001-001,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-000390,PT-gDZo34,LUDLU-1,LUDLU1,72.0,Commercial,,CVCL_2582,LUSC,Adult,Adherent,,Primary,lung,Male,ECACC,NSCLC_squamous,92012463,LUDLU1_LUNG,,,,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000391,PT-APr9xS,MHH-ES-1,MHHES1,12.0,Commercial,SIDM00386,CVCL_1411,ES,Pediatric,Adherent,EWS_FLI,Metastatic,ascites,Male,DSMZ,,ACC 167,MHHES1_BONE,908134.0,,339.0,,,MF-001-001,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-000392,PT-v3MIz8,Calu-3,CALU3,25.0,Commercial,SIDM00922,CVCL_0609,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_adenocarcinoma,HTB-55,CALU3_LUNG,687777.0,,219.0,,,MF-006-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000393,PT-saZI6H,HLF,HLF,68.0,Commercial,SIDM00065,CVCL_2947,HCC,Adult,Adherent,,Primary,liver,Male,HSRRB,,JCRB0405,HLF_LIVER,,,,,,MF-006-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000394,PT-PzvfS6,NCI-H2081,NCIH2081,59.0,Commercial,SIDM00710,CVCL_1522,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Female,ATCC,,CRL-5921,NCIH2081_LUNG,908480.0,,914.0,,,MF-007-010,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000395,PT-mQfWto,NCI-H520,NCIH520,,Commercial,SIDM01130,CVCL_1566,LUSC,Unknown,Adherent,,Primary,lung,Male,ATCC,NSCLC_squamous,HTB-182,NCIH520_LUNG,908443.0,,2200.0,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000396,PT-jGS2bl,J82,J82,58.0,Commercial,SIDM00693,CVCL_0359,BLCA,Adult,Adherent,,Primary,urinary_tract,Male,ATCC,bladder_transitional_cell,HTB-1,J82_URINARY_TRACT,753566.0,,1232.0,,,MF-006-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000397,PT-lpuBPT,TEN,TEN,74.0,Commercial,,CVCL_E063,UCCC,Adult,Adherent,,Primary,endometrium,Female,RIKEN,,RCB1433,TEN_ENDOMETRIUM,,,,,,MF-006-001,None,UCCC,Uterine Clear Cell Carcinoma,Endometrial Carcinoma,Uterus +ACH-000398,PT-OW2fam,RI-1,RI1,57.0,Commercial,,CVCL_1885,ABC,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,DSMZ,b_cell,ACC 585,RI1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,ABC,Activated B-cell Type,Non-Hodgkin Lymphoma,Lymphoid +ACH-000399,PT-FplxWn,NCI-H2196,NCIH2196,67.0,Commercial,SIDM00731,CVCL_1539,SCLC,Adult,Adherent,,Metastatic,bone_marrow,Male,ATCC,,CRL-5932,NCIH2196_LUNG,908481.0,,916.0,,,MF-007-010,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000400,PT-cPXTdY,SK-CO-1,SKCO1,65.0,Commercial,SIDM01096,CVCL_0626,COAD,Adult,Adherent,,Metastatic,ascites,Male,ATCC,,HTB-39,SKCO1_LARGE_INTESTINE,909718.0,,40.0,,,MF-006-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000401,PT-hf4hbl,COLO-800,COLO800,14.0,Commercial,SIDM00515,CVCL_1135,SKCM,Pediatric,Adherent,,Metastatic,skin,Male,ATCC,,CRL-1974,COLO800_SKIN,906813.0,,21.0,,,MF-001-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000402,PT-ieu86J,BL-70,BL70,16.0,Commercial,SIDM00074,CVCL_1088,BL,Pediatric,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell_burkitt,,BL70_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000403,PT-cabct5,NCI-H747,NCIH747,69.0,Commercial,SIDM00778,CVCL_1587,COAD,Adult,Adherent,,Metastatic,large_intestine,Male,ATCC,,CCL-252,NCIH747_LARGE_INTESTINE,908457.0,,573.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000404,PT-xgu7do,K029AX,K029AX,,Academic lab,,CVCL_8784,SKCM,Unknown,Adherent,,Primary,skin,Unknown,Received from CCLE; originally academic lab,,,K029AX_SKIN,,,,,,MF-001-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000405,PT-2VMIkL,MEC-1,MEC1,61.0,Commercial,SIDM00001,CVCL_1870,CLLSLL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,,MEC1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-005-001,None,CLLSLL,Chronic Lymphocytic Leukemia/Small Lymphocytic Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000406,PT-ZwaNYv,U-937,U937,37.0,Commercial,SIDM01195,CVCL_0007,AML,Adult,Suspension,,Metastatic,pleural_effusion,Male,ATCC,,CRL-1593.2,U937_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,SNP fingerprinting rules out contamination. Depmap has correct ATCC stock,,,,MF-001-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000407,PT-iaJKdg,SNU-685,SNU685,70.0,Commercial,SIDM00165,CVCL_5083,UCS,Adult,Adherent,,Primary,endometrium,Female,KCLB,,685,SNU685_ENDOMETRIUM,,,,,,MF-001-001,None,UCS,Uterine Carcinosarcoma/Uterine Malignant Mixed Mullerian Tumor,Endometrial Carcinoma,Uterus +ACH-000408,PT-Tt9e9T,TE-5,TE5,73.0,Commercial,SIDM00347,CVCL_1764,ESCC,Adult,Adherent,,,oesophagus,Female,RIKEN,,RCB1949,TE5_OESOPHAGUS,735784.0,,576.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000409,PT-eYKUfI,OVSAHO,OVSAHO,56.0,Commercial,,CVCL_3114,HGSOC,Adult,Adherent,,Metastatic,abdomen,Female,HSRRB,high_grade_serous,,OVSAHO_OVARY,,,,,,MF-001-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000410,PT-mOrUlf,Saos-2,SAOS2,11.0,Commercial,SIDM01084,CVCL_0548,OS,Pediatric,Adherent,,Primary,bone,Female,ATCC,,HTB-85,SAOS2_BONE,909707.0,,399.0,,,MF-023-002,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-000411,PT-Kwk2bU,769-P,769P,63.0,Commercial,SIDM00803,CVCL_1050,CCRCC,Adult,Adherent,,Primary,kidney,Female,ATCC,clear_cell,CRL-1933,769P_KIDNEY,910922.0,,1186.0,,,MF-001-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000412,PT-FvlAfh,SNU-1197,SNU1197,70.0,Commercial,SIDM00171,CVCL_5016,COAD,Adult,Adherent,,Primary,Colon,Male,KCLB,,,SNU1197_LARGE_INTESTINE,,,,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000413,PT-ipY35J,Hs 739.T,HS739T,52.0,,SIDM01702,CVCL_0882,ZFIBBRE,Adult,Adherent,,,fibroblast,Female,,,,HS739T_FIBROBLAST,,,,,,,None,,"Fibroblast, Breast",Non-Cancerous,Fibroblast +ACH-000414,PT-0Fp6tq,NCI-H1944,NCIH1944,62.0,Commercial,SIDM00762,CVCL_1508,LUAD,Adult,Adherent,,Metastatic,soft_tissue,Female,ATCC,NSCLC_adenocarcinoma,CRL - 5907,NCIH1944_LUNG,1240185.0,,183.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000415,PT-Typnjw,BICR 6,BICR6,,Commercial,,CVCL_2314,HPHSC,Unknown,Adherent,,Primary,upper_aerodigestive_tract,Male,ECACC,oral,5070501,BICR6_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-002-001,None,HPHSC,Hypopharynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000416,PT-YdBNCw,NCI-H838,NCIH838,59.0,Commercial,SIDM01150,CVCL_1594,LUAD,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,NSCLC_adenocarcinoma,CRL-5844,NCIH838_LUNG,910399.0,,484.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000417,PT-9CcA8P,Panc 08.13,PANC0813,85.0,Commercial,SIDM01136,CVCL_1638,PAAD,Adult,Adherent,,Primary,pancreas,Male,ATCC,exocrine_adenocarcinoma,CRL-2551,PANC0813_PANCREAS,925347.0,,635.0,,,MF-001-019,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000418,PT-4X60vq,SW 1353,SW1353,72.0,Commercial,,CVCL_0543,CHS,Adult,Adherent,,Primary,bone,Female,ATCC,,HTB-94,SW1353_BONE,,,,,,MF-021-001,None,CHS,Chondrosarcoma,Chondrosarcoma,Bone +ACH-000419,PT-01q6LP,KMS-28BM,KMS28BM,77.0,Commercial,,CVCL_2994,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,HSRRB,,JCRB1192,KMS28BM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000420,PT-zjdwU2,SNU-449,SNU449,52.0,Commercial,SIDM01194,CVCL_0454,HCC,Adult,Adherent,,Primary,liver,Male,ATCC,,CRL-2234,SNU449_LIVER,909738.0,,129.0,,,MF-001-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000421,PT-M67oxD,SW837,SW837,53.0,Commercial,SIDM00833,CVCL_1729,READ,Adult,Adherent,,Primary,large_intestine,Male,ATCC,,CCL-235,SW837_LARGE_INTESTINE,909755.0,,1141.0,,,MF-001-001,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000422,PT-UjP297,SNU-475,SNU475,43.0,Commercial,SIDM01196,CVCL_0497,HCC,Adult,Adherent,,Primary,liver,Male,ATCC,,,SNU475_LIVER,909739.0,,2059.0,,,MF-001-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000423,PT-TEoeSm,SK-MEL-3,SKMEL3,42.0,Commercial,SIDM01105,CVCL_0550,SKCM,Adult,Adherent,,Metastatic,lymph_node,Female,ATCC,,HTB-69,SKMEL3_SKIN,909724.0,,1572.0,,,MF-023-002,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000424,PT-BIG8te,TC-71,TC71,22.0,Commercial,SIDM00419,CVCL_2213,ES,Adult,Adherent,,Primary,bone,Male,DSMZ,,ACC 516,TC71_BONE,1240221.0,,2194.0,,,MF-005-001,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-000425,PT-Zu8A8i,UACC-62,UACC62,,Academic lab,SIDM00107,CVCL_1780,MEL,Unknown,Adherent,,Primary,skin,Unknown,NCI/DCTD,,AddexBio Product Detail - UACC-62 Cells,UACC62_SKIN,905976.0,,8.0,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000426,PT-9qQHFN,KMS-20,KMS20,65.0,Commercial,,CVCL_2990,PCM,Adult,Suspension,,Primary,bone_marrow,Female,HSRRB,,JCRB1196,KMS20_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000427,PT-e4bHZ8,NCI-N87,NCIN87,,Commercial,SIDM01147,CVCL_1603,TSTAD,Unknown,Adherent,,Metastatic,liver,Male,ATCC,tubular,CRL-5822,NCIN87_STOMACH,908461.0,,88.0,,,MF-001-001,None,TSTAD,Tubular Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000428,PT-8RqCEL,UO-31,UO31,,Academic lab,SIDM00112,CVCL_1911,RCC,Unknown,Adherent,,Primary,kidney,Female,Garraway lab,,,UO31_KIDNEY,905981.0,,1636.0,,,MF-001-014,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000429,PT-hu5eOQ,A-704,A704,78.0,Commercial,SIDM00849,CVCL_1065,RCC,Adult,Adherent,,Primary,kidney,Male,ATCC,,HTB-45,A704_KIDNEY,910920.0,,949.0,,,MF-006-001,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000430,PT-z46I0M,TYK-nu,TYKNU,38.0,Commercial,SIDM00321,CVCL_1776,HGSOC,Adult,Adherent,,Primary,ovary,Female,HSRRB,high_grade_serous,JCRB0234.0,TYKNU_OVARY,909774.0,,476.0,,,MF-006-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000431,PT-5l8uJX,NCI-H1694,NCIH1694,61.0,Commercial,SIDM00741,CVCL_1489,SCLC,Adult,Suspension,,Metastatic,ascites,Male,ATCC,,CRL-5888,NCIH1694_LUNG,688006.0,,451.0,,,MF-004-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000432,PT-6P3A35,BV-173,BV173,45.0,Commercial,SIDM00962,CVCL_0181,CML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,blast_crisis,ACC 20,BV173_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910710.0,,321.0,,,MF-001-021,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-000433,PT-0UOmyW,Caki-1,CAKI1,49.0,Commercial,SIDM00941,CVCL_0234,CCRCC,Adult,Adherent,,Metastatic,skin,Male,ATCC,clear_cell,HTB-46,CAKI1_KIDNEY,905963.0,,289.0,,,MF-023-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000434,PT-3DrWN5,NCI-H1915,NCIH1915,61.0,Commercial,SIDM00763,CVCL_1505,LCLC,Adult,Adherent,,Metastatic,central_nervous_system,Female,ATCC,NSCLC_large_cell,CRL-5904,NCIH1915_LUNG,1240184.0,,1823.0,,,MF-001-001,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000435,PT-HWnYva,EFE-184,EFE184,69.0,Commercial,,CVCL_1191,UCEC,Adult,Adherent,,Metastatic,ascites,Female,DSMZ,,ACC 230,EFE184_ENDOMETRIUM,,,,,,MF-001-001,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000436,PT-vvCo6J,OCI-My7,OCIMY7,,Academic lab,,CVCL_E333,PCM,Unknown,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,Mitsiades (Broad),,,OCIMY7_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000437,PT-uhtVUf,SW 1088,SW1088,72.0,Commercial,SIDM01155,CVCL_1715,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,ATCC,astrocytoma,HTB - 12,SW1088_CENTRAL_NERVOUS_SYSTEM,909745.0,,1310.0,,,MF-001-001,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-000438,PT-DJtGj2,Lu-65,LU65,64.0,Commercial,SIDM00547,CVCL_1392,GCLC,Adult,Suspension,,Primary,lung,Male,JCRB,NSCLC_large_cell,,LU65_LUNG,724863.0,,47.0,,,MF-001-020,None,GCLC,Giant Cell Carcinoma of the Lung,Non-Small Cell Lung Cancer,Lung +ACH-000439,PT-do6aX9,ME-1,ME1,40.0,Commercial,SIDM00338,CVCL_2110,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,M4,,ME1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330942.0,,427.0,,,MF-001-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000440,PT-1BkfPG,CA46,CA46,,Commercial,SIDM00907,CVCL_1101,BL,Unknown,Suspension,,Primary,ascites,Male,ATCC,b_cell_burkitt,CRL-1648,CA46_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910703.0,,1190.0,,Unknown,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000441,PT-wx4HmM,SH-4,SH4,60.0,Commercial,SIDM01079,CVCL_1692,MEL,Adult,Adherent,,Metastatic,pleural_effusion,Female,ATCC,,CRL-7724,SH4_SKIN,909713.0,,1179.0,,,MF-002-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000442,PT-uWXLpm,RERF-LC-Sq1,RERFLCSQ1,74.0,Commercial,SIDM00354,CVCL_1656,LUSC,Adult,Adherent,,Primary,lung,Female,HSRRB,NSCLC_squamous,,RERFLCSQ1_LUNG,1298538.0,,449.0,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000443,PT-9fFef6,OVKATE,OVKATE,40.0,Commercial,SIDM00466,CVCL_3110,HGSOC,Adult,Adherent,,Primary,ovary,Female,HSRRB,high_grade_serous,JCRB1044,OVKATE_OVARY,1240199.0,,1094.0,,,MF-001-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000444,PT-IpPvfc,LU99,LU99,63.0,Commercial,SIDM00546,CVCL_3015,GCLC,Adult,Adherent,,Metastatic,pleura,Male,HSRRB,NSCLC_large_cell,JCRB0080,LU99_LUNG,,,,,,MF-001-001,None,GCLC,Giant Cell Carcinoma of the Lung,Non-Small Cell Lung Cancer,Lung +ACH-000445,PT-N1UIhD,KNS-60,KNS60,55.0,Commercial,,CVCL_2798,GB,Adult,Adherent,,Primary,central_nervous_system,Male,HSRRB,glioblastoma,IFO50357,KNS60_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-008,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000446,PT-QRDJzM,KP-N-SI9s,KPNSI9S,5.0,Commercial,,CVCL_1340,NBL,Pediatric,Adherent,,Metastatic,autonomic_ganglia,Male,HSRRB,,,KPNSI9S_AUTONOMIC_GANGLIA,,,,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000447,PT-QmAMEj,NCI-H2228,NCIH2228,,Commercial,SIDM00729,CVCL_1543,LUAD,Unknown,Adherent,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,CRL-5935,NCIH2228_LUNG,687816.0,,1812.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000448,PT-3icxN1,NCI-H1666,NCIH1666,50.0,Commercial,SIDM00743,CVCL_1485,LUAD,Adult,Mixed,,Metastatic,pleural_effusion,Female,ATCC,NSCLC_adenocarcinoma,CRL-5885,NCIH1666_LUNG,908473.0,,958.0,,,MF-001-014,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000449,PT-E7giyP,MES-SA,MESSA,56.0,Commercial,SIDM00625,CVCL_1404,USARC,Adult,Adherent,,Primary,endometrium,Female,ATCC,,CRL-1976,MESSA_SOFT_TISSUE,908127.0,,1395.0,,,MF-023-001,None,USARC,Uterine Sarcoma/Mesenchymal,Uterine Sarcoma/Mesenchymal,Uterus +ACH-000450,PT-tIdwwm,MEL-HO,MELHO,,Commercial,SIDM00337,CVCL_1402,MEL,Unknown,Adherent,,Primary,skin,Female,DSMZ,,ACC 62,MELHO_SKIN,908124.0,This line is a ME-WEI derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,2109.0,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000451,PT-hZbJSf,NCI-H2085,NCIH2085,45.0,Commercial,SIDM00709,CVCL_1523,LUAD,Adult,Adherent,,Primary,lung,Male,ATCC,NSCLC_adenocarcinoma,,NCIH2085_LUNG,687812.0,,80.0,,,MF-001-014,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000452,PT-xIsO4O,TE-8,TE8,63.0,Commercial,SIDM00326,CVCL_1766,ESCC,Adult,Adherent,,,oesophagus,Male,RIKEN,,RCB2098,TE8_OESOPHAGUS,753623.0,,2253.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000453,PT-hPsKNs,MOLP-2,MOLP2,55.0,Commercial,,CVCL_2123,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,,ACC 607,MOLP2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-021,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000454,PT-u7ecNk,HCC-95,HCC95,65.0,Commercial,,CVCL_5137,LUSC,Adult,Adherent,,Metastatic,pleural_effusion,Male,KCLB,NSCLC_squamous,70095,HCC95_LUNG,,,,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000455,PT-XOGcZJ,LN-428,LN428,48.0,Academic lab,,CVCL_3959,GB,Adult,Adherent,,Primary,central_nervous_system,Male,Linda Chin,glioblastoma,,LN428_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000456,PT-UFvK3A,B-CPAP,BCPAP,76.0,Commercial,SIDM00992,CVCL_0153,THPD,Adult,Adherent,,Primary,thyroid,Female,DSMZ,papillary,273,BCPAP_THYROID,924104.0,,346.0,,,MF-001-001,None,THPD,Poorly Differentiated Thyroid Cancer,Poorly Differentiated Thyroid Cancer,Thyroid +ACH-000457,PT-lO2Jn8,CAL-54,CAL54,75.0,Commercial,SIDM00932,CVCL_1111,RCC,Adult,Adherent,,Metastatic,pleural_effusion,Male,DSMZ,,ACC 365,CAL54_KIDNEY,910952.0,,482.0,,,MF-002-009,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000458,PT-CfuEas,CJM,CJM,,Commercial,,CVCL_U797,MEL,Unknown,Adherent,,Metastatic,skin,Male,RIKEN,,RCB1034,CJM_SKIN,,,,,,MF-004-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000459,PT-myAfV5,TUHR10TKB,TUHR10TKB,69.0,Commercial,,CVCL_5952,CCRCC,Adult,Adherent,,Primary,kidney,Male,RIKEN,,RCB1275,TUHR10TKB_KIDNEY,,,,,,MF-001-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000460,PT-OIFKmV,SNU-8,SNU8,55.0,Commercial,,CVCL_5096,SOC,Adult,Adherent,,Metastatic,ascites,Female,KCLB,high_grade_serous,,SNU8_OVARY,,,,,,MF-001-001,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000461,PT-1PHTgt,SNU-1196,SNU1196,,Commercial,SIDM00163,CVCL_5015,EHCH,Unknown,Adherent,,Primary,biliary_tract,Unknown,KCLB,extrahepatic,1196,SNU1196_BILIARY_TRACT,,,,,,MF-001-005,None,EHCH,Extrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-000462,PT-ln5u7z,NALM-1,NALM1,3.0,Commercial,,CVCL_0091,CML,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,blast_crisis,,NALM1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-000463,PT-gfHIRD,NCI-H460,NCIH460,,Commercial,SIDM00144,CVCL_0459,LCLC,Unknown,Adherent,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_large_cell,HTB-177,NCIH460_LUNG,905943.0,,2146.0,,,MF-001-001,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000464,PT-3nLBts,CAS-1,CAS1,63.0,,SIDM00212,CVCL_1117,GB,Adult,Adherent,,Primary,central_nervous_system,Male,ICLC,glioblastoma,HTL97009,CAS1_CENTRAL_NERVOUS_SYSTEM,910943.0,,604.0,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000465,PT-spChit,SK-MEL-1,SKMEL1,29.0,Commercial,SIDM01107,CVCL_0068,MEL,Adult,Suspension,,Metastatic,haematopoietic_and_lymphoid_tissue,Male,ATCC,,,SKMEL1_SKIN,909723.0,,42.0,,,MF-015-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000466,PT-IGNlGv,SNU-216,SNU216,46.0,Commercial,,CVCL_3946,TSTAD,Adult,Adherent,,Metastatic,lymph_node,Female,KCLB,tubular,216,SNU216_STOMACH,,,,,,MF-001-001,None,TSTAD,Tubular Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000467,PT-2RDjdA,HCC-56,HCC56,,Commercial,SIDM00597,CVCL_2917,COAD,Unknown,Adherent,,Primary,large_intestine,Unknown,HSRRB,,JCRB1037,HCC56_LARGE_INTESTINE,1290907.0,,1036.0,,,MF-006-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000468,PT-Ej6iPJ,PK-45H,PK45H,,Commercial,,CVCL_6748,PAAD,Unknown,Adherent,,Primary,pancreas,Unknown,RIKEN,exocrine_adenocarcinoma,RCB1973,PK45H_PANCREAS,,,,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000469,PT-hzuTX4,YH-13,YH13,40.0,Commercial,SIDM00316,CVCL_1795,GB,Adult,Adherent,,Primary,central_nervous_system,Male,HSRRB,glioblastoma,IFO50493,YH13_CENTRAL_NERVOUS_SYSTEM,909905.0,,468.0,,,MF-015-009,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000470,PT-XPa83T,SW1463,SW1463,66.0,Commercial,SIDM00834,CVCL_1718,READ,Adult,Adherent,,Primary,large_intestine,Female,ATCC,,CCL-234,SW1463_LARGE_INTESTINE,909748.0,,271.0,,,MF-001-001,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000471,PT-6EhW80,Li-7,LI7,45.0,Commercial,,CVCL_3840,HCC,Adult,Adherent,,Primary,liver,Male,RIKEN,,RCB1941,LI7_LIVER,,,,,,MF-001-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000472,PT-MxVfNi,HSC-2,HSC2,69.0,Commercial,SIDM00590,CVCL_1287,OCSC,Adult,Adherent,,Metastatic,upper_aerodigestive_tract,Male,HSRRB,,JCRB0622,HSC2_UPPER_AERODIGESTIVE_TRACT,753562.0,,944.0,,,MF-006-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000473,PT-ESM25t,RT-112,RT112,,Commercial,SIDM00402,CVCL_1670,BLCA,Unknown,Adherent,,Primary,urinary_tract,Female,DSMZ,bladder_transitional_cell,418,RT112_URINARY_TRACT,909704.0,,25.0,,,MF-001-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000475,PT-fHVhJI,huH-1,HUH1,53.0,Commercial,SIDM00586,CVCL_2956,HCC,Adult,Adherent,,Primary,liver,Male,HSRRB,hbs_antigen_carrier,JCRB0199,HUH1_LIVER,1298146.0,,1855.0,,,MF-002-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000476,PT-UVxXgl,JHH-4,JHH4,51.0,Commercial,SIDM00616,CVCL_2787,HCC,Adult,Adherent,,Primary,liver,Male,HSRRB,,JCRB0435,JHH4_LIVER,1240158.0,,931.0,,,MF-006-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000477,PT-A0Pe6P,Malme-3M,MALME3M,43.0,Commercial,SIDM00011,CVCL_1438,MEL,Adult,Adherent,,Metastatic,lung,Male,ATCC,,HTB-64,MALME3M_SKIN,,,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000478,PT-KvGBYp,SNU-387,SNU387,41.0,Commercial,SIDM01180,CVCL_0250,HCC,Adult,Adherent,,Primary,liver,Female,ATCC,,CRL-2237,SNU387_LIVER,909736.0,,1482.0,,,MF-001-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000479,PT-hM3DN4,KNS-81,KNS81,65.0,Commercial,SIDM00605,CVCL_2799,GB,Adult,Adherent,,Primary,central_nervous_system,Male,HSRRB,glioblastoma,IFO50359,KNS81_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-008,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000480,PT-cw7s0S,HuH-7,HUH7,57.0,Commercial,SIDM00585,CVCL_0336,HCC,Adult,Adherent,,Primary,liver,Male,HSRRB,,JCRB0403,HUH7_LIVER,907071.0,,2195.0,,,MF-002-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000481,PT-CazMr1,NCI-H2170,NCIH2170,,Commercial,SIDM00716,CVCL_1535,LUSC,Unknown,Adherent,,Primary,lung,Male,ATCC,NSCLC_squamous,CRL-5928,NCIH2170_LUNG,687815.0,,1811.0,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000482,PT-G8tjyE,RERF-LC-KJ,RERFLCKJ,78.0,Commercial,SIDM00356,CVCL_1654,LUAD,Adult,Adherent,,Primary,lung,Male,HSRRB,NSCLC_adenocarcinoma,JCRB0137,RERFLCKJ_LUNG,1298537.0,,960.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000483,PT-YTIYsu,SNU-182,SNU182,24.0,Commercial,SIDM01151,CVCL_0090,HCC,Adult,Adherent,,Primary,liver,Male,ATCC,,CRL-2235,SNU182_LIVER,1240216.0,,1481.0,,,MF-001-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000484,PT-BHz6vU,VMRC-RCW,VMRCRCW,,Commercial,SIDM00318,CVCL_1790,RCC,Unknown,Adherent,,Primary,kidney,Male,RIKEN,,RCB1963,VMRCRCW_KIDNEY,1240224.0,,1459.0,,,MF-006-001,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000485,PT-JcZulh,GSU,GSU,37.0,Commercial,,CVCL_8877,STAD,Adult,Mixed,,Metastatic,ascites,Male,RIKEN,,RCB2278,GSU_STOMACH,,,,,,MF-001-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000486,PT-W6AZYO,KU-19-19,KU1919,76.0,Commercial,SIDM01033,CVCL_1344,BLCA,Adult,Adherent,,Primary,urinary_tract,Female,DSMZ,bladder_transitional_cell,395,KU1919_URINARY_TRACT,907312.0,,892.0,,,MF-001-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000487,PT-fzbPIv,F-36P,F36P,68.0,Commercial,,CVCL_2037,MDS,Adult,Suspension,,Metastatic,pleural_effusion,Male,DSMZ,M6,,F36P_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-028,None,MDS,Myelodysplastic Syndromes,Myelodysplastic Syndromes,Myeloid +ACH-000488,PT-wdkGZi,TE-11,TE11,58.0,Commercial,SIDM00348,CVCL_1761,ESCC,Adult,Adherent,,Primary,oesophagus,Male,RIKEN,,RCB2100,TE11_OESOPHAGUS,946354.0,,2073.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000489,PT-EtFrRG,SW1116,SW1116,73.0,Commercial,SIDM00835,CVCL_0544,COAD,Adult,Adherent,,Primary,Colon,Male,ATCC,,CCl-233,SW1116_LARGE_INTESTINE,909746.0,,480.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000490,PT-Ag8pMW,SF767,SF767,66.0,Academic lab,SIDM00626,CVCL_6950,CESC,Adult,Adherent,,Metastatic,abdomen,Female,Linda Chin,astrocytoma,,SF767_CENTRAL_NERVOUS_SYSTEM,,SNP fingerprinting confirms that this line is a ME-180 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,MF-002-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-000491,PT-5GhHA6,NCI-H716,NCIH716,33.0,Commercial,SIDM00779,CVCL_1581,COAD,Adult,Mixed,,Metastatic,ascites,Male,ATCC,,,NCIH716_LARGE_INTESTINE,908458.0,,649.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000492,PT-mlZ1w1,MUTZ-5,MUTZ5,26.0,Commercial,SIDM01689,CVCL_1873,BLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,ACC 490,MUTZ5_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000493,PT-nNGWmq,SNU-423,SNU423,40.0,Commercial,SIDM01199,CVCL_0366,HCC,Adult,Adherent,,Primary,liver,Male,ATCC,,CRL-2238,SNU423_LIVER,909737.0,,481.0,,,MF-001-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000494,PT-dZGXnc,OELE,OELE,,Academic lab,,CVCL_IW56,ZIMMOV,Unknown,Adherent,,,ovary,Female,Jesse Boehm (Broad),,,OELE_OVARY,,,,,,,None,,Immortalized Ovarian Cells,Non-Cancerous,Ovary/Fallopian Tube +ACH-000495,PT-GcbNSr,TUHR4TKB,TUHR4TKB,60.0,Commercial,,CVCL_5957,RCC,Adult,Adherent,,Primary,kidney,Male,RIKEN,,RCB1198,TUHR4TKB_KIDNEY,,,,,,MF-002-001,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000496,PT-5umTu0,NCI-H1792,NCIH1792,50.0,Commercial,SIDM00771,CVCL_1495,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_adenocarcinoma,CRL-5895,NCIH1792_LUNG,724868.0,,2122.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000498,PT-pWs9uO,KO52,KO52,46.0,Commercial,SIDM00018,CVCL_1321,AML,Adult,Suspension,,,bone_marrow,Male,HSRRB,M2,,KO52_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330932.0,,1325.0,,,MF-003-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000499,PT-m8xCzo,EW8,EW8,,Academic lab,,CVCL_V618,ES,Pediatric,Adherent,EWS_FLI,Primary,bone,Male,Kim Stegmaier (Broad),,,EW8_BONE,,,,,,MF-002-003,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-000500,PT-7wjU8J,SNU-46,SNU46,65.0,Commercial,,CVCL_5063,LXSC,Adult,Adherent,,,upper_aerodigestive_tract,Male,KCLB,laryngeal,46,SNU46_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-001-005,None,LXSC,Larynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000501,PT-kCvNaO,LS123,LS123,65.0,Commercial,SIDM00776,CVCL_1383,COAD,Adult,Adherent,,Primary,Colon,Female,ATCC,,CCL-255,LS123_LARGE_INTESTINE,907792.0,,2266.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000502,PT-HGOuqa,TCC-PAN2,TCCPAN2,47.0,Commercial,,CVCL_3178,PAAD,Adult,Adherent,,Metastatic,ascites,Female,HSRRB,exocrine_adenocarcinoma,TCCPAN2,TCCPAN2_PANCREAS,,,,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000503,PT-9uZV0s,BICR 16,BICR16,,Commercial,,CVCL_2308,OCSC,Unknown,Adherent,,Primary,upper_aerodigestive_tract,Male,ECACC,oral,6031001,BICR16_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-002-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000504,PT-YFHa1n,SNB75,SNB75,75.0,Academic lab,SIDM00095,CVCL_1706,GB,Adult,Adherent,,Primary,central_nervous_system,Female,Garraway lab,,,SNB75_CENTRAL_NERVOUS_SYSTEM,905982.0,,1181.0,,,MF-001-014,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000505,PT-yLm1aj,RKN,RKN,45.0,Commercial,SIDM00353,CVCL_3156,LMS,Adult,Adherent,,Primary,ovary,Female,HSRRB,,JCRB0176,RKN_SOFT_TISSUE,1298539.0,,1471.0,,,MF-004-001,None,LMS,Leiomyosarcoma,Leiomyosarcoma,Soft Tissue +ACH-000506,PT-VTukYY,NCI-H146,NCIH146,59.0,Commercial,SIDM00698,CVCL_1473,SCLC,Adult,Suspension,,Metastatic,bone_marrow,Male,ATCC,,HTB-173,NCIH146_LUNG,910899.0,,932.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000507,PT-6nN2YI,KE-39,KE39,77.0,Commercial,,CVCL_3385,STAD,Adult,Adherent,,Metastatic,lymph_node,Male,RIKEN,,RCB1434,KE39_STOMACH,,,,,,MF-001-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000508,PT-YUXlCn,COR-L88,CORL88,55.0,Commercial,SIDM00506,CVCL_1141,SCLC,Adult,Mixed,,Metastatic,pleural_effusion,Male,ECACC,,92031917,CORL88_LUNG,906808.0,,774.0,,,MF-001-003,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000509,PT-PrSlzw,HuT 78,HUT78,53.0,Commercial,SIDM00851,CVCL_0337,SS,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,ATCC,t_cell_cutaneous,TIB-161,HUT78_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-005-004,None,SS,Sezary Syndrome,Non-Hodgkin Lymphoma,Lymphoid +ACH-000510,PT-7qWq2K,NCI-H1299,NCIH1299,43.0,Commercial,SIDM00649,CVCL_0060,LCLC,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,NSCLC_large_cell,CRL-5803,NCIH1299_LUNG,724831.0,,1235.0,,,MF-001-001,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000511,PT-R4QjAn,Calu-1,CALU1,47.0,Commercial,,CVCL_0608,LUSC,Adult,Adherent,,Metastatic,pleura,Male,ATCC,NSCLC_squamous,HTB-54,CALU1_LUNG,,,,,,MF-023-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000512,PT-H09155,INA6,INA6,80.0,Academic lab,,CVCL_5209,PCM,Adult,Suspension,,,pleural_effusion,Male,Constantine (?),,,INA6_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-024,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000513,PT-yzeH2y,SNU-1272,SNU1272,63.0,Commercial,SIDM01335,CVCL_8788,CCRCC,Adult,Adherent,,Primary,kidney,Female,KCLB,clear_cell,,SNU1272_KIDNEY,,,,,,MF-001-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000514,PT-Jj10yy,NCI-H1092,NCIH1092,67.0,Commercial,SIDM00653,CVCL_1454,SCLC,Adult,Suspension,,Metastatic,bone_marrow,Male,ATCC,,CRL-5855,NCIH1092_LUNG,687997.0,,1928.0,,,MF-007-025,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000515,PT-BuE22y,HCC-33,HCC33,52.0,Commercial,SIDM01071,CVCL_2058,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Male,DSMZ,,ACC-487,HCC33_LUNG,1303901.0,,353.0,,,MF-001-020,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000516,PT-gEiUjw,CAL-78,CAL78,76.0,Commercial,SIDM00929,CVCL_1809,DDCHS,Adult,Adherent,,,soft_tissue,Male,DSMZ,,ACC 449,CAL78_BONE,1290765.0,,1148.0,,,MF-001-020,None,DDCHS,Dedifferentiated Chondrosarcoma,Chondrosarcoma,Bone +ACH-000517,PT-V7OSXp,SNU-410,SNU410,53.0,Commercial,,CVCL_5059,PAAD,Adult,Adherent,,Metastatic,liver,Male,KCLB,exocrine_adenocarcinoma,410,SNU410_PANCREAS,,,,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000518,PT-czsVU5,CAL-33,CAL33,69.0,Commercial,SIDM00942,CVCL_1108,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,DSMZ,oral,447,CAL33_UPPER_AERODIGESTIVE_TRACT,753541.0,,2041.0,,,MF-002-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000519,PT-qXF8IT,PEER,PEER,4.0,Commercial,SIDM00991,CVCL_1913,TLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,HSRRB,t_cell,,PEER_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000520,PT-tv8Ku2,59M,59M,65.0,Commercial,,CVCL_2291,HGSOC,Adult,Adherent,,Metastatic,ascites,Female,ECACC,high_grade_serous,,59M_OVARY,,,,,,,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000521,PT-hEuGfg,NCI-H2030,NCIH2030,,Commercial,SIDM00715,CVCL_1517,LUAD,Unknown,Adherent,,Metastatic,lymph_node,Male,ATCC,NSCLC_adenocarcinoma,CRL-5914,NCIH2030_LUNG,722045.0,,912.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000522,PT-sPPqcj,UM-UC-3,UMUC3,,Commercial,SIDM01182,CVCL_1783,BLCA,Unknown,Adherent,,Primary,urinary_tract,Male,ATCC,bladder_transitional_cell,CRL-1749,UMUC3_URINARY_TRACT,724838.0,,9.0,,,MF-006-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000523,PT-RZo2RD,NCI-H1184,NCIH1184,42.0,Commercial,,CVCL_1458,SCLC,Adult,Mixed,,Metastatic,lymph_node,Male,ATCC,,,NCIH1184_LUNG,,,,,,MF-001-020,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000524,PT-6ZFCGi,KURAMOCHI,KURAMOCHI,,Commercial,SIDM00554,CVCL_1345,HGSOC,Unknown,Adherent,,Metastatic,ascites,Female,HSRRB,high_grade_serous,JCRB0098,KURAMOCHI_OVARY,909975.0,,854.0,,,MF-001-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000525,PT-NNs10U,NCI-H2171,NCIH2171,50.0,Commercial,SIDM00733,CVCL_1536,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Male,ATCC,,CRL-5929,NCIH2171_LUNG,688015.0,,1571.0,,,MF-001-020,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000526,PT-GaHenH,Hs 821.T,HS821T,31.0,Commercial,SIDM01698,CVCL_0932,ZFIBBON,Adult,Adherent,,Primary,fibroblast,Female,ATCC,,CRL-7554,HS821T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Bone",Non-Cancerous,Fibroblast +ACH-000527,PT-oYazft,OVISE,OVISE,40.0,Commercial,SIDM00564,CVCL_3116,CCOV,Adult,Adherent,,Metastatic,bone,Female,HSRRB,clear_cell,JCRB1043,OVISE_OVARY,1240198.0,,358.0,,,MF-001-001,None,CCOV,Clear Cell Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000528,PT-id2eBb,ABC-1,ABC1,47.0,Commercial,SIDM00494,CVCL_1066,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Male,HSRRB,NSCLC_adenocarcinoma,JCRB0815,ABC1_LUNG,906791.0,,1557.0,,,MF-006-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000529,PT-dpzREw,T1-73,T173,,Commercial,,CVCL_3605,ZFIBBON,Unknown,Adherent,,,fibroblast,Unknown,ATCC,,CRL-7943,T173_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Bone",Non-Cancerous,Fibroblast +ACH-000530,PT-Dxq8HG,DMS 114,DMS114,68.0,Commercial,SIDM00865,CVCL_1174,SCLC,Adult,Adherent,,Primary,lung,Male,ATCC,,CRL-2066,DMS114_LUNG,687983.0,,1495.0,,,MF-020-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000531,PT-omRFB9,RS-5,RS5,78.0,Commercial,SIDM01772,CVCL_2182,ZFIBLUN,Adult,Adherent,,,fibroblast,Male,DSMZ,,,RS5_FIBROBLAST,,,,,,,None,,"Fibroblast, Lung",Non-Cancerous,Fibroblast +ACH-000532,PT-663aNr,SNU-61,SNU61,48.0,Commercial,SIDM00194,CVCL_5078,READ,Adult,Adherent,,Metastatic,liver,Male,KCLB,,61,SNU61_LARGE_INTESTINE,1660035.0,,151.0,,,MF-001-001,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000533,PT-x2jmX9,NCI-H2004 RT,NCIH2004RT,,Academic lab,,CVCL_WS70,MRT,Pediatric,Adherent,,,soft_tissue,Male,Roberts (St Jude Hospital),,,NCIH2004RT_SOFT_TISSUE,,,,,,MF-001-001,None,MRT,Rhabdoid Cancer,Rhabdoid Cancer,Kidney +ACH-000534,PT-kwERT7,WSU-DLCL2,WSUDLCL2,41.0,Commercial,SIDM00413,CVCL_1902,DLBCLNOS,Adult,Suspension,,Metastatic,pleural_effusion,Male,DSMZ,DLBCL,ACC 575,WSUDLCL2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331050.0,,557.0,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000535,PT-xfjEoE,BxPC-3,BXPC3,61.0,Commercial,SIDM00132,CVCL_0186,PAAD,Adult,Adherent,,Primary,pancreas,Female,ATCC,exocrine_adenocarcinoma,CRL-1687,BXPC3_PANCREAS,906693.0,,1978.0,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000536,PT-jtQBfm,BT-20,BT20,74.0,Commercial,SIDM00893,CVCL_0178,IDC,Adult,Adherent,basal_A,Primary,breast,Female,ATCC,ERneg_HER2neg,HTB-19,BT20_BREAST,906801.0,SNP fingerprinting rules out HeLa contamination.,2264.0,,,MF-006-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000537,PT-CLc6my,SNU-761,SNU761,49.0,Commercial,,CVCL_5089,HCC,Adult,Adherent,,Primary,liver,Male,KCLB,,761,SNU761_LIVER,,,,,,MF-001-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000538,PT-AXbbCE,HUTU80,HUTU80,53.0,Commercial,SIDM00694,CVCL_1301,DA,Adult,Adherent,,Primary,small_intestine,Male,ATCC,,,HUTU80_SMALL_INTESTINE,907073.0,,305.0,,,MF-006-001,None,DA,Duodenal Adenocarcinoma,Small Bowel Cancer,Bowel +ACH-000539,PT-XVtYa8,Hs 618.T,HS618T,60.0,Commercial,,CVCL_0827,ZFIBLUN,Adult,Adherent,,Primary,fibroblast,Female,ATCC,,,HS618T_FIBROBLAST,,,,,,,None,,"Fibroblast, Lung",Non-Cancerous,Fibroblast +ACH-000540,PT-vhNbvZ,Hs 606.T,HS606T,44.0,Commercial,SIDM01591,CVCL_0819,ZFIBBRE,Adult,Adherent,,,fibroblast,Female,ATCC,,,HS606T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Breast",Non-Cancerous,Fibroblast +ACH-000541,PT-K9dsbf,KMS-34,KMS34,60.0,Commercial,,CVCL_2996,PCM,Adult,Suspension,,Primary,pleural_effusion,Female,HSRRB,,JCRB1195,KMS34_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000542,PT-0hMOxQ,Hey-A8,HEYA8,,Academic lab,SIDM01215,CVCL_8878,HGSOC,Unknown,Adherent,,Metastatic,ascites,Female,Received from CCLE; originally academic lab,low_grade_serous,,HEYA8_OVARY,,,,,,MF-001-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000543,PT-Jxj2hs,SNU-489,SNU489,54.0,Commercial,,CVCL_5069,GB,Adult,Adherent,,Primary,central_nervous_system,Male,KCLB,glioblastoma,489,SNU489_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-001-005,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000544,PT-SDTBu5,OE21,OE21,74.0,,SIDM00478,CVCL_2661,ESCC,Adult,Adherent,,Primary,oesophagus,Male,HPACC,,Cannot find HPACC link,OE21_OESOPHAGUS,1298359.0,,2152.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000545,PT-LSFu4z,VM-CUB1,VMCUB1,,Commercial,SIDM00414,CVCL_1786,BLCA,Unknown,Adherent,,Primary,urinary_tract,Male,DSMZ,bladder_transitional_cell,400,VMCUB1_URINARY_TRACT,909780.0,,276.0,,,MF-002-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000546,PT-F3GXIi,HSC-4,HSC4,64.0,Commercial,SIDM00588,CVCL_1289,OCSC,Adult,Adherent,,Metastatic,upper_aerodigestive_tract,Male,HSRRB,,,HSC4_UPPER_AERODIGESTIVE_TRACT,907062.0,,99.0,,,MF-001-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000547,PT-Tid1hK,HT-1197,HT1197,44.0,Commercial,SIDM00676,CVCL_1291,BLCA,Adult,Adherent,,Primary,urinary_tract,Male,ATCC,,CRL-1473,HT1197_URINARY_TRACT,907065.0,,1533.0,,,MF-006-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000548,PT-p0K5QM,BHY,BHY,52.0,Commercial,SIDM00986,CVCL_1086,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,DSMZ,oral,ACC 404,BHY_UPPER_AERODIGESTIVE_TRACT,753535.0,,748.0,,,MF-002-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000549,PT-1JhWBd,SNU-1076,SNU1076,60.0,Commercial,SIDM00168,CVCL_5006,LXSC,Adult,Adherent,,,upper_aerodigestive_tract,Male,KCLB,laryngeal,1076,SNU1076_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-001-005,None,LXSC,Larynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000550,PT-Wg8rkx,IGR-39,IGR39,26.0,Commercial,SIDM01065,CVCL_2076,MEL,Adult,Adherent,,Primary,skin,Male,DSMZ,,ACC 239,IGR39_SKIN,,,,,,MF-002-022,None,MEL,Melanoma,Melanoma,Skin +ACH-000551,PT-y8u0p3,K-562,K562,53.0,Commercial,SIDM00791,CVCL_0004,CMLBCRABL1,Adult,Suspension,,Metastatic,pleural_effusion,Female,ATCC,blast_crisis,CCL-243,K562_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,905940.0,,2098.0,,,MF-005-001,None,CMLBCRABL1,"Chronic Myeloid Leukemia, BCR-ABL1+",Myeloproliferative Neoplasms,Myeloid +ACH-000552,PT-sF39aT,HT-29,HT29,44.0,Commercial,SIDM00136,CVCL_0320,COAD,Adult,Adherent,,Primary,large_intestine,Female,ATCC,,HTB-38,HT29_LARGE_INTESTINE,905939.0,,1212.0,,,MF-023-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000553,PT-yEcMkf,Sq-1,SQ1,,Commercial,,CVCL_4900,LUSC,Unknown,Adherent,,Primary,lung,Male,RIKEN,NSCLC_squamous,RCB1905,SQ1_LUNG,,,,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000554,PT-i8kZN9,UACC-893,UACC893,57.0,Commercial,SIDM01186,CVCL_1782,ILC,Adult,Adherent,HER2_amp,Primary,breast,Female,ATCC,ERneg_HER2pos,CRL-1902,UACC893_BREAST,909778.0,,1090.0,,,MF-021-001,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000555,PT-n8dkSy,A-498,A498,52.0,Commercial,SIDM00124,CVCL_1056,RCC,Adult,Adherent,,Primary,kidney,Female,ATCC,,HTB-44,A498_KIDNEY,905948.0,,602.0,,,MF-006-001,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000556,PT-ahSjGm,SIHA,SIHA,55.0,Commercial,SIDM01093,CVCL_0032,CESC,Adult,Adherent,,Primary,cervix,Female,ATCC,,HTB-35,SIHA_CERVIX,930297.0,,1354.0,,,MF-015-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-000557,PT-CVf0Wr,AML-193,AML193,13.0,Commercial,,CVCL_1071,AML,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,ATCC,M5,CRL-9589,AML193_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-005-007,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000558,PT-LA0Wfj,A-172,A172,53.0,Commercial,SIDM00799,CVCL_0131,GB,Adult,Adherent,,Primary,central_nervous_system,Male,ATCC,glioblastoma,CRL-1620,A172_CENTRAL_NERVOUS_SYSTEM,687563.0,,1777.0,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000559,PT-xIjoai,NCI-H1836,NCIH1836,52.0,Commercial,SIDM00770,CVCL_1498,SCLC,Adult,Suspension,,Primary,lung,Male,ATCC,,CRL-5898,NCIH1836_LUNG,1240182.0,,1829.0,,,MF-007-010,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000560,PT-mjQUio,ECC10,ECC10,73.0,Commercial,SIDM00280,CVCL_1188,STSC,Adult,Mixed,,Metastatic,liver,Male,RIKEN,,RCB0983,ECC10_STOMACH,906848.0,,799.0,,,MF-001-001,None,STSC,Small Cell Carcinoma of the Stomach,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000561,PT-k9mv4v,T.T,TDOTT,67.0,Commercial,SIDM00322,CVCL_3174,ESCC,Adult,Adherent,,Metastatic,bone,Male,HSRRB,,JCRB0262,TT_OESOPHAGUS,1299064.0,,544.0,,,MF-004-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000562,PT-TdkTP0,HCC-78,HCC78,65.0,Commercial,SIDM01068,CVCL_2061,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Male,DSMZ,NSCLC_adenocarcinoma,ACC 563,HCC78_LUNG,1290908.0,,639.0,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000563,PT-YTpbR2,EBC-1,EBC1,69.0,Commercial,SIDM00486,CVCL_2891,LUSC,Adult,Adherent,,Metastatic,skin,Male,RIKEN,NSCLC_squamous,RCB1965,EBC1_LUNG,753554.0,,1665.0,,,MF-006-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000564,PT-QKo5S3,KHM-1B,KHM1B,53.0,Commercial,,CVCL_2972,PCM,Adult,Suspension,,Primary,pleural_effusion,Male,HSRRB,,JCRB0133,KHM1B_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000565,PT-XIcCcb,RCM-1,RCM1,73.0,Commercial,SIDM00359,CVCL_1648,READ,Adult,Adherent,,Primary,large_intestine,Female,HSRRB,,JCRB0256,RCM1_LARGE_INTESTINE,909263.0,,1271.0,,,,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000566,PT-OoHSSv,SW-1710,SW1710,84.0,Commercial,SIDM00420,CVCL_1721,BLCA,Adult,Adherent,,Primary,urinary_tract,Female,DSMZ,bladder_transitional_cell,426,SW1710_URINARY_TRACT,909749.0,,2.0,,,,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000567,PT-PA3Bay,ST486,ST486,,Commercial,SIDM01198,CVCL_1712,BL,Unknown,Suspension,,Metastatic,ascites,Female,ATCC,b_cell_burkitt,CRL-1647,ST486_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910906.0,,130.0,,Unknown,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000568,PT-4c0rgH,UACC-812,UACC812,43.0,Commercial,SIDM01187,CVCL_1781,ILC,Adult,Mixed,luminal,Primary,breast,Female,ATCC,ERpos_HER2pos,CRL-1897,UACC812_BREAST,910910.0,,1754.0,,,MF-001-020,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000569,PT-uTRkEi,IST-MES1,ISTMES1,70.0,,SIDM00224,CVCL_1311,PLEMESO,Adult,Adherent,,Primary,pleural_effusion,Female,ICLC,,ICLC HTL01005,ISTMES1_PLEURA,907173.0,,1001.0,,,MF-002-003,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-000570,PT-mxsdQX,YKG1,YKG1,53.0,Commercial,SIDM00315,CVCL_1796,GB,Adult,Adherent,,Primary,central_nervous_system,Female,HSRRB,glioblastoma,JCRB0746,YKG1_CENTRAL_NERVOUS_SYSTEM,687592.0,,61.0,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000571,PT-dw7sni,T98G,T98G,61.0,Commercial,SIDM01171,CVCL_0556,GB,Adult,Adherent,,Primary,central_nervous_system,Male,ATCC,glioblastoma,CRL-1690,T98G_CENTRAL_NERVOUS_SYSTEM,687586.0,,131.0,,,MF-006-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000572,PT-GdtXdl,G-361,G361,31.0,Commercial,SIDM00857,CVCL_1220,MEL,Adult,Adherent,,Primary,skin,Male,ATCC,,CRL-1424,G361_SKIN,906865.0,,1173.0,,,MF-023-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000573,PT-aOGEYV,MDA-MB-436,MDAMB436,43.0,Commercial,SIDM00629,CVCL_0623,BRCNOS,Adult,Mixed,basal_B,Metastatic,pleural_effusion,Female,ATCC,ERneg_HER2neg,HTB-130,MDAMB436_BREAST,1240172.0,,927.0,,,,None,BRCNOS,"Breast Invasive Carcinoma, NOS",Invasive Breast Carcinoma,Breast +ACH-000574,PT-WpzPv5,FU-OV-1,FUOV1,65.0,Commercial,SIDM01040,CVCL_2047,HGSOC,Adult,Adherent,,Primary,ovary,Female,DSMZ,high_grade_serous,,FUOV1_OVARY,1240129.0,,2063.0,,,MF-002-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000575,PT-Gfa8CF,HCC-364,HCC364,76.0,Academic lab,,CVCL_5134,LUAD,Adult,Adherent,,Primary,lung,Male,From Meyerson (Broad) who received from Gazdar,NSCLC_adenocarcinoma,,HCC364_LUNG,,,,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000576,PT-EvS9IW,KMS-27,KMS27,52.0,Commercial,,CVCL_2993,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,HSRRB,,JCRB1188,KMS27_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000577,PT-DNXpFr,JHH-2,JHH2,57.0,Commercial,SIDM00617,CVCL_2786,HCC,Adult,Adherent,,Metastatic,ascites,Male,HSRRB,,,JHH2_LIVER,1240157.0,,347.0,,,MF-006-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000578,PT-JbQXVN,HCC-1171,HCC1171,58.0,Commercial,,CVCL_5126,LUAD,Adult,Adherent,,Primary,lung,Male,KCLB,NSCLC_adenocarcinoma,,HCC1171_LUNG,,,,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000579,PT-KoNkGk,UACC-257,UACC257,,Academic lab,SIDM00108,CVCL_1779,MEL,Unknown,Adherent,,Primary,skin,Unknown,NCI/DCTD,,Cannot find link to NCI/DCTD,UACC257_SKIN,905977.0,,14.0,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000580,PT-Dlqu1U,C32,C32,53.0,Commercial,SIDM00890,CVCL_1097,MEL,Adult,Adherent,,Primary,skin,Male,ATCC,amelanotic,CRL-1585,C32_SKIN,906830.0,,2242.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-000581,PT-NDi54R,SNU-16,SNU16,33.0,Commercial,SIDM01145,CVCL_0076,STAD,Adult,Suspension,,Metastatic,ascites,Female,ATCC,,CRL-5974,SNU16_STOMACH,908446.0,,291.0,,,MF-001-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000582,PT-l2xN1V,COLO 741,COLO741,69.0,Commercial,,CVCL_1133,MEL,Adult,Adherent,,Metastatic,skin,Female,ECACC,,93052621,COLO741_SKIN,,,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000583,PT-Lrf7XT,MC116,MC116,,Commercial,SIDM00637,CVCL_1399,MBN,Unknown,Suspension,,,pleural_effusion,Male,ATCC,b_cell,CRL-1649,MC116_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907799.0,,2082.0,,,MF-001-020,None,MBN,Mature B-Cell Neoplasms,Non-Hodgkin Lymphoma,Lymphoid +ACH-000584,PT-g4qhEH,JHOS-4,JHOS4,44.0,Commercial,SIDM00303,CVCL_4649,HGSOC,Adult,Adherent,,Primary,ovary,Female,RIKEN,high_grade_serous,RCB1678,JHOS4_OVARY,1480359.0,,1651.0,,,MF-007-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000585,PT-HU0uli,EPLC-272H,EPLC272H,57.0,Commercial,SIDM01044,CVCL_1197,LUSC,Adult,Adherent,,Primary,lung,Male,DSMZ,NSCLC_squamous,,EPLC272H_LUNG,753556.0,,404.0,,,MF-001-020,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000586,PT-0a2F5a,NCI-H1876,NCIH1876,59.0,Commercial,SIDM00766,CVCL_1503,SCLC,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,,CRL-5902,NCIH1876_LUNG,1330972.0,,91.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000587,PT-HkdFKw,NCI-H1975,NCIH1975,,Commercial,SIDM00759,CVCL_1511,LUAD,Unknown,Adherent,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,CRL-5908,NCIH1975_LUNG,924244.0,,1403.0,,,MF-002-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000588,PT-wXGfqR,KMS-26,KMS26,50.0,Commercial,,CVCL_2992,PCM,Adult,Suspension,,Primary,pleural_effusion,Male,HSRRB,,,KMS26_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000589,PT-KKsvGZ,NCI-H1437,NCIH1437,60.0,Commercial,SIDM00734,CVCL_1472,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_adenocarcinoma,CRL-5872,NCIH1437_LUNG,687794.0,,800.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000590,PT-v8h3uk,NCI-H2073,NCIH2073,47.0,Commercial,SIDM00757,CVCL_1521,LUAD,Adult,Adherent,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,CRL-5918,NCIH2073_LUNG,,,,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000591,PT-8XX4Me,LN-235,LN235,38.0,Academic lab,,CVCL_3957,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,Linda Chin,astrocytoma,,LN235_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-000592,PT-ruaWWk,TM-31,TM31,42.0,Commercial,,CVCL_6735,ASTR,Adult,Adherent,,Primary,central_nervous_system,Female,RIKEN,,RCB1731,TM31_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-006-001,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-000593,PT-SQ6fkx,BC-3C,BC3C,82.0,Commercial,,CVCL_1958,BLCA,Adult,Adherent,,Primary,urinary_tract,Female,DSMZ,bladder_transitional_cell,450,BC3C_URINARY_TRACT,,,,,,MF-023-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000594,PT-lo0Jdx,DMS 153,DMS153,44.0,Commercial,,CVCL_1175,SCLC,Adult,Mixed,,Metastatic,liver,Male,ATCC,,,DMS153_LUNG,,,,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000595,PT-jhnjmL,LN-229,LN229,60.0,Commercial,SIDM00684,CVCL_0393,GB,Adult,Adherent,,Primary,central_nervous_system,Female,ATCC,glioblastoma,CRL-2611,LN229_CENTRAL_NERVOUS_SYSTEM,1240169.0,,1504.0,,,MF-002-008,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000596,PT-9Zamyo,LCLC-97TM1,LCLC97TM1,44.0,Commercial,SIDM00344,CVCL_1376,LCLC,Adult,Adherent,,Primary,lung,Male,DSMZ,NSCLC_large_cell,,LCLC97TM1_LUNG,946361.0,,485.0,,,MF-001-020,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000597,PT-XDzUk4,TTC-709,TTC709,0.0,Academic lab,,CVCL_8007,ATRT,Pediatric,Adherent,,,soft_tissue,Male,Roberts (St Jude Hospital),,,TTC709_SOFT_TISSUE,,,,,,MF-001-001,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-000598,PT-smSaav,KMS-21BM,KMS21BM,62.0,Commercial,,CVCL_2991,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,HSRRB,,JCRB1185,KMS21BM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,This line is a KMS-24 derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000599,PT-cDj854,PA-TU-8902,PATU8902,44.0,Commercial,SIDM00455,CVCL_1845,PAAD,Adult,Adherent,,Primary,pancreas,Female,DSMZ,exocrine_adenocarcinoma,ACC 179,PATU8902_PANCREAS,1298526.0,,1549.0,,,MF-002-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000600,PT-d0vDzs,SLR 26,SLR26,,Academic lab,,CVCL_V612,CCRCC,Unknown,Adherent,,Primary,kidney,Male,Bill Kaelin (DFCI),,,SLR26_KIDNEY,,,,,,MF-001-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000601,PT-EzM7Ui,MIA PaCa-2,MIAPACA2,65.0,Commercial,SIDM00505,CVCL_0428,PAAD,Adult,Adherent,,Primary,pancreas,Male,ATCC,exocrine_adenocarcinoma,CRL-1420,MIAPACA2_PANCREAS,724870.0,,1541.0,,,MF-002-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000602,PT-T0am5q,M-07e,M07E,0.0,Commercial,,CVCL_2106,AMKL,Pediatric,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,DSMZ,M7,,M07E_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-028,None,AMKL,Acute Megakaryoblastic Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000603,PT-BPHtVG,BEN,BEN,71.0,Commercial,SIDM00990,CVCL_1082,NSCLC,Adult,Adherent,,Metastatic,lymph_node,Male,DSMZ,,ACC 254,BEN_LUNG,753534.0,,971.0,,,,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-000604,PT-yTztZ0,KYO-1,KYO1,22.0,Commercial,,CVCL_2095,CML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,blast_crisis,ACC 601,KYO1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-000605,PT-4Pwq3T,TE-6,TE6,71.0,Commercial,SIDM00328,CVCL_1765,ESCC,Adult,Adherent,,,oesophagus,Male,RIKEN,,RCB1950,TE6_OESOPHAGUS,946355.0,,1642.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000606,PT-qno39F,PE/CA-PJ34 (clone C12),PECAPJ34CLONEC12,60.0,Commercial,,CVCL_2679,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,ECACC,basaloid,,PECAPJ34CLONEC12_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-005-002,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000607,PT-UnVDKb,KYM-1,KYM1,0.0,Commercial,SIDM00552,CVCL_3007,ERMS,Pediatric,Suspension,,Primary,soft_tissue,Male,HSRRB,,JCRB0627,KYM1_SOFT_TISSUE,1240166.0,,1344.0,,,MF-007-001,None,ERMS,Embryonal Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-000608,PT-lr2HyG,COV644,COV644,,Commercial,,CVCL_2425,MOV,Unknown,Adherent,,Primary,ovary,Female,ECACC,mucinous,7071908,COV644_OVARY,,,,,,MF-002-003,None,MOV,Mucinous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000609,PT-w4DAqh,SF126,SF126,50.0,Commercial,SIDM00382,CVCL_1688,GB,Adult,Adherent,,Primary,central_nervous_system,Female,HSRRB,astrocytoma,IFO50286,SF126_CENTRAL_NERVOUS_SYSTEM,909712.0,,1677.0,,,MF-006-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000610,PT-mtt5MQ,NCI-H2227,NCIH2227,54.0,Commercial,SIDM00730,CVCL_1542,SCLC,Adult,Mixed,,Primary,lung,Male,ATCC,,,NCIH2227_LUNG,688018.0,,1220.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000611,PT-zkZBHL,SU-DHL-6,SUDHL6,43.0,Commercial,SIDM00407,CVCL_2206,DLBCLNOS,Adult,Suspension,,Metastatic,ascites,Male,DSMZ,DLBCL,CRL-2959,SUDHL6_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331037.0,,2036.0,,,MF-001-020,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000612,PT-DxsAw3,HuT 102,HUT102,28.0,Commercial,SIDM01734,CVCL_3526,MYCF,Adult,Suspension,,,lymph_node,Male,ATCC,t_cell,,HUT102_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,,None,MYCF,Mycosis Fungoides,Non-Hodgkin Lymphoma,Lymphoid +ACH-000613,PT-epgMPc,HOS,HOS,13.0,Commercial,SIDM00806,CVCL_0312,OS,Pediatric,Adherent,,Primary,bone,Female,ATCC,,CRL-1543,HOS_BONE,907060.0,,1202.0,,,,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-000614,PT-Zy2EsL,RVH-421,RVH421,28.0,Commercial,SIDM00401,CVCL_1672,MEL,Adult,Adherent,,Metastatic,central_nervous_system,Male,DSMZ,,ACC 127,RVH421_SKIN,909706.0,,1274.0,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000615,PT-xtiBPE,SK-MEL-28,SKMEL28,51.0,Commercial,SIDM00081,CVCL_0526,SKCM,Adult,Adherent,,Primary,skin,Male,ATCC,,HTB-72,SKMEL28_SKIN,905954.0,,1499.0,,,MF-006-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000616,PT-8WpAkT,Hs 746T,HS746T,74.0,Commercial,SIDM00665,CVCL_0333,STAD,Adult,Adherent,,Metastatic,soft_tissue,Male,ATCC,,,HS746T_STOMACH,1240151.0,,1850.0,,,MF-002-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000617,PT-hZYskw,OVCAR-4,OVCAR4,42.0,Academic lab,SIDM00092,CVCL_1627,HGSOC,Adult,Adherent,,Metastatic,ascites,Female,NCI/DCTD,high_grade_serous,,OVCAR4_OVARY,905990.0,,606.0,,,MF-001-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000618,PT-BJe5Qe,SNU-1041,SNU1041,58.0,Commercial,SIDM00173,CVCL_L085,HPHSC,Adult,Adherent,,,upper_aerodigestive_tract,Male,KCLB,hypopharyngeal,1041,SNU1041_UPPER_AERODIGESTIVE_TRACT,,,,,,,None,HPHSC,Hypopharynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000619,PT-UF0NQM,PE/CA-PJ15,PECAPJ15,45.0,Commercial,SIDM00473,CVCL_2678,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,ECACC,oral,96121230,PECAPJ15_UPPER_AERODIGESTIVE_TRACT,1240207.0,,1810.0,,,MF-005-002,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000620,PT-JMO4rY,JHH-1,JHH1,50.0,Commercial,SIDM00618,CVCL_2785,HCC,Adult,Adherent,,Primary,liver,Male,HSRRB,,JCRB1062,JHH1_LIVER,1298151.0,DepMap stock of JHH-1 does not have mouse contamination.,89.0,,,MF-022-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000621,PT-ER2PWK,MDA-MB-157,MDAMB157,44.0,Commercial,SIDM00529,CVCL_0618,IDC,Adult,Adherent,basal_B,Metastatic,pleural_effusion,Female,ATCC,ERneg_HER2neg,HTB-24,MDAMB157_BREAST,925338.0,,1796.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000622,PT-25ATIE,KNS-42,KNS42,16.0,Commercial,SIDM00607,CVCL_0378,GB,Pediatric,Adherent,,Primary,central_nervous_system,Male,HSRRB,glioblastoma,IFO50356,KNS42_CENTRAL_NERVOUS_SYSTEM,907282.0,,1149.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000623,PT-llEy7t,SNU-201,SNU201,58.0,Commercial,SIDM00158,CVCL_5033,GB,Adult,Adherent,,Primary,central_nervous_system,Male,KCLB,glioblastoma,201,SNU201_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-001-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000624,PT-j1ziCB,HCC1806,HCC1806,60.0,Commercial,SIDM00875,CVCL_1258,DCIS,Adult,Adherent,basal_A,Primary,breast,Female,ATCC,ERneg_HER2neg,CRL-2335,HCC1806_BREAST,907047.0,,1317.0,,,MF-001-001,None,DCIS,Breast Ductal Carcinoma In Situ,Breast Ductal Carcinoma In Situ,Breast +ACH-000625,PT-oPfLLk,Hep 3B2.1-7,HEP3B217,8.0,Commercial,SIDM00672,CVCL_0326,HCC,Pediatric,Mixed,,Primary,liver,Male,ATCC,,HB-8064,HEP3B217_LIVER,1240147.0,,1922.0,,,MF-006-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000626,PT-e6abeY,U266B1,U266B1,53.0,Commercial,SIDM00417,CVCL_0566,PCM,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,ATCC,plasmacytoma,TIB-196,U266B1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,753615.0,,1635.0,,,,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000627,PT-Rd3J4D,LCLC-103H,LCLC103H,61.0,Commercial,SIDM00345,CVCL_1375,LCLC,Adult,Adherent,,Metastatic,pleural_effusion,Male,DSMZ,NSCLC_large_cell,ACC 384,LCLC103H_LUNG,753586.0,,1502.0,,,MF-001-001,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000628,PT-QC2SAk,NCI-H596,NCIH596,73.0,Commercial,SIDM01127,CVCL_1571,LUAS,Adult,Adherent,,Primary,lung,Male,ATCC,NSCLC_adenosquamous,HTB-178,NCIH596_LUNG,908459.0,,1225.0,,,,None,LUAS,Lung Adenosquamous Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000629,PT-Aw6i69,IOMM-Lee,IOMMLEE,61.0,Academic lab,,CVCL_5779,MNG,Adult,Adherent,,Primary,central_nervous_system,Male,Dunn (BWH),,,IOMMLEE_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,MNG,Meningioma,Meningothelial Tumor,CNS/Brain +ACH-000630,PT-uty9xg,YD-8,YD8,46.0,Commercial,,CVCL_L079,OCSC,Adult,Adherent,,,upper_aerodigestive_tract,Female,KCLB,tongue,60501,YD8_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-001-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000631,PT-j6IJnV,KS-1,KS1,45.0,Commercial,SIDM00555,CVCL_1343,GB,Adult,Adherent,,Primary,central_nervous_system,Female,HSRRB,astrocytoma,IFO50436,KS1_CENTRAL_NERVOUS_SYSTEM,907313.0,,1387.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000632,PT-CeiJLF,Hs 944.T,HS944T,51.0,Commercial,SIDM00063,CVCL_1040,SKCM,Adult,Adherent,,Metastatic,skin,Male,ATCC,,Discontinued,HS944T_SKIN,,,,,,MF-002-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000633,PT-zUYVjw,FU97,FU97,66.0,Commercial,SIDM00503,CVCL_2908,DSTAD,Adult,Adherent,,Primary,stomach,Female,HSRRB,diffuse_gastric,,FU97_STOMACH,1290806.0,,2062.0,,,MF-002-010,None,DSTAD,Diffuse Type Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000634,PT-FYoibe,LN-340,LN340,57.0,Academic lab,,CVCL_3955,GB,Adult,Adherent,,Primary,central_nervous_system,Male,Linda Chin,glioblastoma,,LN340_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000635,PT-vHYCC2,SNU-119,SNU119,50.0,Commercial,,CVCL_5014,HGSOC,Adult,Adherent,,Metastatic,ascites,Female,KCLB,high_grade_serous,119,SNU119_OVARY,,,,,,MF-001-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000636,PT-yCJrgB,RPMI-8402,RPMI8402,16.0,Commercial,SIDM00403,CVCL_1667,TLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,t_cell,290,RPMI8402_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909702.0,,288.0,,,MF-001-001,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000637,PT-bnLm4Y,KYSE-520,KYSE520,58.0,Commercial,SIDM01025,CVCL_1355,ESCC,Adult,Adherent,,Primary,oesophagus,Female,DSMZ,,ACC 371,KYSE520_OESOPHAGUS,753575.0,,894.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000638,PT-xglezn,NCI-H441,NCIH441,33.0,Commercial,SIDM00925,CVCL_1561,LUAD,Adult,Adherent,,Metastatic,pericardial_effusion,Male,ATCC,NSCLC_adenocarcinoma,HTB-174,NCIH441_LUNG,908460.0,,1815.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000639,PT-PkJ80f,NCI-H211,NCIH211,50.0,Commercial,SIDM00704,CVCL_1529,SCLC,Adult,Mixed,,Metastatic,bone_marrow,Female,ATCC,,CRL-5824,NCIH211_LUNG,1240189.0,,2107.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000640,PT-Zpoh5W,SK-MEL-31,SKMEL31,33.0,Commercial,SIDM01104,CVCL_0600,SKCM,Adult,Adherent,,Primary,skin,Female,ATCC,,HTB-73,SKMEL31_SKIN,909727.0,,153.0,,,,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000641,PT-XYdNvp,CMK,CMK,0.0,Commercial,SIDM00959,CVCL_0216,MLADS,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,M7,,CMK_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910566.0,,734.0,,,MF-001-020,None,MLADS,Myeloid Leukemia Associated with Down Syndrome,Acute Myeloid Leukemia,Myeloid +ACH-000642,PT-FzOtZ1,HMEL,HMEL,,Academic lab,,CVCL_IZ34,ZIMMBR,Unknown,Mixed,,,breast,Female,Jesse Boehm (Broad),,,HMEL_BREAST,,,,,,,None,,Immortalized Breast Cells,Non-Cancerous,Breast +ACH-000643,PT-wBDiHn,HDQ-P1,HDQP1,50.0,Commercial,SIDM01062,CVCL_2067,IDC,Adult,Adherent,basal_A,Primary,breast,Female,DSMZ,ERneg_HER2neg,ACC-494,HDQP1_BREAST,1290922.0,,743.0,,,MF-002-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000644,PT-w6ABKA,COLO 829,COLO829,45.0,Commercial,SIDM00909,CVCL_1137,SKCM,Adult,Adherent,,Primary,skin,Male,ATCC,,CRL-1974,COLO829_SKIN,687448.0,,430.0,,,MF-001-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000645,PT-igc1W1,JL-1,JL1,54.0,Commercial,,CVCL_2080,PLEMESO,Adult,Adherent,,Primary,pleura,Male,DSMZ,,ACC 596,JL1_PLEURA,,,,,,MF-002-009,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-000646,PT-nonBNX,OVMANA,OVMANA,51.0,Commercial,,CVCL_3111,CCOV,Adult,Adherent,,Primary,ovary,Female,HSRRB,clear_cell,,OVMANA_OVARY,,,,,,MF-001-001,None,CCOV,Clear Cell Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000647,PT-bxGrwa,TE-1,TE1,58.0,Commercial,SIDM00369,CVCL_1759,ESCC,Adult,Adherent,,Primary,oesophagus,Male,JCRB,,Cannot find on JCRB website,TE1_OESOPHAGUS,753621.0,,1493.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000648,PT-pVwyuS,NCI-H28,NCIH28,48.0,Commercial,SIDM00720,CVCL_1555,PLEMESO,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,,CRL-5820,NCIH28_PLEURA,908470.0,,1199.0,,,MF-001-001,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-000649,PT-4QH2lI,786-O,786O,58.0,Commercial,SIDM00125,CVCL_1051,CCRCC,Adult,Adherent,,Primary,kidney,Male,ATCC,clear_cell,CRL-1932,786O_KIDNEY,905947.0,,301.0,,,MF-001-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000650,PT-Wg8rkx,IGR-37,IGR37,26.0,Commercial,SIDM01066,CVCL_2075,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,DSMZ,,ACC 237,IGR37_SKIN,1240153.0,,1535.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-000651,PT-IPboWn,SW 620,SW620,51.0,Commercial,SIDM00841,CVCL_0547,COAD,Adult,Mixed,,Metastatic,lymph_node,Male,ATCC,,CCL-227,SW620_LARGE_INTESTINE,905962.0,,3.0,,,MF-021-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000652,PT-ETHfq8,SUIT-2,SUIT2,73.0,Commercial,SIDM00371,CVCL_3172,PAAD,Adult,Adherent,,Metastatic,liver,Male,HSRRB,exocrine_adenocarcinoma,JCRB1094,SUIT2_PANCREAS,1240219.0,,1749.0,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000653,PT-vA8rQh,JJN-3,JJN3,57.0,Commercial,SIDM01036,CVCL_2078,PCM,Adult,Suspension,,Primary,bone_marrow,Female,DSMZ,,ACC 541,JJN3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1327766.0,,905.0,,,,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000654,PT-WEYO1e,Raji,RAJI,11.0,Commercial,SIDM00844,CVCL_0511,BL,Pediatric,Suspension,,Primary,bone,Male,ATCC,b_cell_burkitt,,RAJI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909262.0,,1762.0,,,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000655,PT-ZQKvHU,SF268,SF268,24.0,Academic lab,SIDM00085,CVCL_1689,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,Garraway lab,,,SF268_CENTRAL_NERVOUS_SYSTEM,905986.0,Cell line thought to be female but has Y chromsome expression.,1490.0,,,MF-001-014,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-000656,PT-qpbJK2,SU-DHL-8,SUDHL8,59.0,Commercial,SIDM00423,CVCL_2207,DLBCLNOS,Adult,Suspension,,Metastatic,pleural_effusion,Male,DSMZ,DLBCL,ACC 573,SUDHL8_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331038.0,,1877.0,,,,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000657,PT-ug3gCf,A2780,A2780,,Commercial,SIDM00210,CVCL_0134,EOV,Unknown,Adherent,,Primary,ovary,Female,ECACC,endometrioid,93112519,A2780_OVARY,906804.0,,1245.0,,,MF-001-001,None,EOV,Endometrioid Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000658,PT-iwlil6,KMS-18,KMS18,60.0,Commercial,,CVCL_A637,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,ATCC,,Discontinued,KMS18_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,Identical lines: KMS-18 and KE-97 share high SNP identity,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000659,PT-hfsFIb,SCLC-21H,SCLC21H,46.0,Commercial,SIDM00029,CVCL_0024,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Male,DSMZ,,ACC 372,SCLC21H_LUNG,,,,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000660,PT-PDsx7s,SU-DHL-5,SUDHL5,17.0,Commercial,SIDM00406,CVCL_1735,DLBCLNOS,Pediatric,Suspension,,Primary,lymph_node,Female,DSMZ,DLBCL,,SUDHL5_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331036.0,,1609.0,,,MF-001-020,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000661,PT-VxRt2m,WM1799,WM1799,,Academic lab,,CVCL_A341,MEL,Unknown,Adherent,,Primary,skin,Male,The Wistar Institute,,Cannot find WISTAR website,WM1799_SKIN,,,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000662,PT-S1tr6I,COR-L23,CORL23,62.0,Commercial,SIDM00512,CVCL_1139,LCLC,Adult,Adherent,,Metastatic,pleural_effusion,Male,ECACC,NSCLC_large_cell,92031919,CORL23_LUNG,687780.0,,1313.0,,,MF-001-003,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000663,PT-kymkHN,OVTOKO,OVTOKO,78.0,Commercial,SIDM00425,CVCL_3117,CCOV,Adult,Adherent,,Metastatic,spleen,Female,HSRRB,clear_cell,JCRB1048,OVTOKO_OVARY,1298365.0,,1095.0,,,MF-001-001,None,CCOV,Clear Cell Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000664,PT-jm7IYN,SU-DHL-1,SUDHL1,10.0,Commercial,SIDM00390,CVCL_0538,ALCLALKP,Pediatric,Suspension,,,pleural_effusion,Male,DSMZ,t_cell_ALCL,CRL-2955,SUDHL1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909742.0,,1634.0,,,MF-001-001,None,ALCLALKP,Anaplastic Large-Cell Lymphoma ALK Positive,Non-Hodgkin Lymphoma,Lymphoid +ACH-000665,PT-41lHFE,SK-MES-1,SKMES1,65.0,Commercial,SIDM01103,CVCL_0630,LUSC,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_squamous,HTB-58,SKMES1_LUNG,909728.0,,1628.0,,,MF-002-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000666,PT-ELrBOm,NCI-H1355,NCIH1355,53.0,Commercial,SIDM00645,CVCL_1464,LUAD,Adult,Suspension,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_adenocarcinoma,CRL-5865,NCIH1355_LUNG,724866.0,,1780.0,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000667,PT-uY17tx,HCC-44,HCC44,54.0,Commercial,SIDM01069,CVCL_2060,LUAD,Adult,Adherent,,Primary,lung,Female,DSMZ,NSCLC_adenocarcinoma,ACC 534,HCC44_LUNG,1240145.0,,1247.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000668,PT-3DyHhv,HCC70,HCC70,49.0,Commercial,SIDM00673,CVCL_1270,IDC,Adult,Adherent,basal_A,Primary,breast,Female,ATCC,ERneg_HER2neg,,HCC70_BREAST,907048.0,,937.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000669,PT-sj3DbQ,SW 900,SW900,53.0,Commercial,SIDM01158,CVCL_1731,LUSC,Adult,Adherent,,Primary,lung,Male,ATCC,NSCLC_squamous,HTB-59,SW900_LUNG,724879.0,,1454.0,,,,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000670,PT-CGv0xl,SBC-5,SBC5,65.0,Commercial,SIDM00368,CVCL_1679,SCLC,Adult,Adherent,,Metastatic,pleural_effusion,Male,HSRRB,,JCRB0819,SBC5_LUNG,713880.0,,999.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000671,PT-TtIXsL,HuH-6,HUH6,1.0,Commercial,SIDM00062,CVCL_4381,LIHB,Pediatric,Adherent,,Primary,liver,Male,RIKEN,,RCB1367,HUH6_LIVER,,,,,,MF-002-001,None,LIHB,Hepatoblastoma,Hepatoblastoma,Liver +ACH-000672,PT-C7amr4,IA-LM,IALM,68.0,Commercial,SIDM00306,CVCL_1302,LCLC,Adult,Adherent,,Metastatic,skin,Male,RIKEN,NSCLC_large_cell,RCB0554,IALM_LUNG,910779.0,,1792.0,,,MF-004-001,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000673,PT-6DJ7vB,LN-443,LN443,,Academic lab,,CVCL_3960,GB,Unknown,Adherent,,Primary,central_nervous_system,Female,Linda Chin,glioblastoma,,LN443_CENTRAL_NERVOUS_SYSTEM,,This line is an LN-444 derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000674,PT-1QXwef,NUGC-4,NUGC4,35.0,Commercial,SIDM00570,CVCL_3082,DSTAD,Adult,Mixed,,Metastatic,lymph_node,Female,RIKEN,diffuse_gastric,RCB1939,NUGC4_STOMACH,1298357.0,,941.0,,,MF-001-001,None,DSTAD,Diffuse Type Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000675,PT-HfJpz7,NCI-H1734,NCIH1734,56.0,Commercial,SIDM00739,CVCL_1491,LUAD,Adult,Adherent,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,CRL-5891,NCIH1734_LUNG,722058.0,,411.0,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000676,PT-iObwE0,LN-464,LN464,67.0,Academic lab,SIDM00058,CVCL_3962,GB,Adult,Adherent,,Primary,central_nervous_system,Male,Linda Chin,glioblastoma,,LN464_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000677,PT-Z9x3iF,SW 1573,SW1573,44.0,Commercial,SIDM01163,CVCL_1720,LUAD,Adult,Adherent,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,CRL-2170,SW1573_LUNG,724878.0,,849.0,,,MF-021-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000678,PT-YUTQOS,MKN7,MKN7,39.0,Commercial,SIDM00560,CVCL_1417,TSTAD,Adult,Adherent,,Metastatic,lymph_node,Male,RIKEN,tubular,RCB0999,MKN7_STOMACH,924250.0,,2113.0,,,MF-001-001,None,TSTAD,Tubular Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000679,PT-Tt2TJf,OE-19,OE19,72.0,,SIDM00479,CVCL_1622,ESCC,Adult,Adherent,,Primary,oesophagus,Male,HPACC,laryngeal,Cannot find HPACC link,OE19_OESOPHAGUS,910079.0,,1664.0,,,MF-001-003,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000680,PT-R9aZKI,SW948,SW948,81.0,Commercial,SIDM00832,CVCL_0632,COAD,Adult,Mixed,,Primary,Colon,Female,ATCC,,CCL-237,SW948_LARGE_INTESTINE,909757.0,,1689.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000681,PT-cqv92I,A549,A549,58.0,Commercial,SIDM00903,CVCL_0023,LUAD,Adult,Adherent,,Primary,lung,Male,ATCC,NSCLC_adenocarcinoma,CCL-185,A549_LUNG,905949.0,,369.0,,,MF-002-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000682,PT-Svdo1R,SNU-1066,SNU1066,62.0,Commercial,SIDM00170,CVCL_5005,LXSC,Adult,Adherent,,,upper_aerodigestive_tract,Male,KCLB,,1066,SNU1066_UPPER_AERODIGESTIVE_TRACT,,,,,,,None,LXSC,Larynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000683,PT-O04gFy,SNU-503,SNU503,52.0,Commercial,SIDM00497,CVCL_5071,READ,Adult,Adherent,,Metastatic,abdomen,Male,KCLB,,,SNU503_LARGE_INTESTINE,,,,,,MF-001-001,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000684,PT-wbA1oa,KMRC-1,KMRC1,,Commercial,SIDM00611,CVCL_2983,CCRCC,Adult,Adherent,,Primary,kidney,Male,HSRRB,clear_cell,JCRB1010,KMRC1_KIDNEY,1298168.0,,1514.0,,,MF-002-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000685,PT-rSVcxp,L3.3,L33,77.0,Academic lab,,CVCL_8147,PAASC,Adult,Mixed,,Metastatic,lymph_node,Female,Received from CCLE; originally academic lab,exocrine_adenosquamous,,L33_PANCREAS,,,,,,,None,PAASC,Adenosquamous Carcinoma of the Pancreas,Adenosquamous Carcinoma of the Pancreas,Pancreas +ACH-000686,PT-CSmVRq,SNU-878,SNU878,54.0,Commercial,,CVCL_5102,HCC,Adult,Adherent,,Primary,liver,Female,KCLB,,878,SNU878_LIVER,,,,,,MF-001-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000687,PT-9CCSAo,CI-1,CI1,38.0,Commercial,,CVCL_1861,MBN,Adult,Suspension,,Primary,ascites,Female,DSMZ,b_cell,ACC-570,CI1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,Pre-treatment,MF-001-020,None,MBN,Mature B-Cell Neoplasms,Non-Hodgkin Lymphoma,Lymphoid +ACH-000688,PT-iVAxAa,OV7,OV7,78.0,Commercial,SIDM00474,CVCL_2675,MXOV,Adult,Adherent,,Primary,ovary,Female,ECACC,mixed_serous_clear_cell,96020764,OV7_OVARY,1480360.0,,1985.0,,,MF-007-009,None,MXOV,Mixed Ovarian Carcinoma,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000689,PT-W27kK4,RH-18,RH18,2.0,Commercial,SIDM00454,CVCL_1659,ARMS,Pediatric,Adherent,,,soft_tissue,Female,DSMZ,,,RH18_SOFT_TISSUE,971774.0,,861.0,,,,None,ARMS,Alveolar Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-000690,PT-TTn4cT,HCC-2814,HCC2814,55.0,Academic lab,,CVCL_V586,LUSC,Adult,Adherent,,Primary,lung,Male,Matt Meyerson (Broad),NSCLC_squamous,,HCC2814_LUNG,,,,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000691,PT-vOaofa,HCC2157,HCC2157,48.0,Commercial,SIDM00774,CVCL_1261,IDC,Adult,Suspension,basal_A,Primary,breast,Female,ATCC,ERneg_HER2neg,CRL-2340,HCC2157_BREAST,749715.0,,351.0,,,MF-001-014,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000692,PT-7eZ7vS,SNU-899,SNU899,56.0,Commercial,SIDM00169,CVCL_5105,LXSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,KCLB,laryngeal,899,SNU899_UPPER_AERODIGESTIVE_TRACT,,,,,,,None,LXSC,Larynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000693,PT-mOm35A,KYSE-180,KYSE180,53.0,Commercial,SIDM01030,CVCL_1349,ESCC,Adult,Adherent,,Primary,oesophagus,Male,DSMZ,,ACC 379,KYSE180_OESOPHAGUS,907318.0,,599.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000694,PT-bNO06l,TE-9,TE9,48.0,Commercial,SIDM00325,CVCL_1767,ESCC,Adult,Adherent,,Metastatic,pleural_effusion,Male,RIKEN,,RCB1988,TE9_OESOPHAGUS,946353.0,,1312.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000695,PT-WHXDvG,COR-L47,CORL47,67.0,Commercial,,CVCL_2415,SCLC,Adult,Suspension,,Metastatic,bone_marrow,Male,ECACC,,,CORL47_LUNG,,,,,,MF-001-003,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000696,PT-AlUnJX,OVCAR-8,OVCAR8,64.0,Academic lab,SIDM00090,CVCL_1629,HGSOC,Adult,Adherent,,Primary,ovary,Female,NCI/DCTD,high_grade_serous,Cannot find NCI/DCTD link,OVCAR8_OVARY,905991.0,,2131.0,,,MF-001-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000697,PT-T19rUu,A3/KAW,A3KAW,68.0,Commercial,SIDM00495,CVCL_1062,DLBCLNOS,Adult,Suspension,,Primary,ascites,Female,HSRRB,DLBCL,JCRB0101,A3KAW_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910935.0,,1511.0,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000698,PT-ERlBcq,DMS 53,DMS53,54.0,Commercial,SIDM00523,CVCL_1177,SCLC,Adult,Adherent,,Primary,lung,Male,ATCC,,CRL-2062,DMS53_LUNG,907295.0,,580.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000699,PT-8MisfZ,HCC1395,HCC1395,43.0,Commercial,SIDM00884,CVCL_1249,IDC,Adult,Adherent,basal_B,Primary,breast,Female,ATCC,ERneg_HER2neg,CRL-2324,HCC1395_BREAST,749712.0,,94.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000700,PT-o9axOH,NCI-H2882,NCIH2882,61.0,Academic lab,,CVCL_5158,LUSC,Adult,Adherent,,Primary,lung,Female,Meyerson (Broad) who received from Minna,NSCLC_squamous,,NCIH2882_LUNG,,,,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000701,PT-ColGZ0,RMUG-S,RMUGS,62.0,Commercial,,CVCL_3158,MOV,Adult,Adherent,,Primary,ovary,Female,HSRRB,mucinous,IFO50320,RMUGS_OVARY,,,,,,MF-004-001,None,MOV,Mucinous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000702,PT-ImJeys,L-1236,L1236,34.0,Commercial,SIDM00313,CVCL_2096,HL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,DSMZ,,,L1236_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330935.0,,408.0,,,MF-001-001,None,HL,Hodgkin Lymphoma,Hodgkin Lymphoma,Lymphoid +ACH-000703,PT-BeO6a2,DMS 79,DMS79,65.0,Commercial,SIDM00524,CVCL_1178,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Male,ATCC,,CRL-2049,DMS79_LUNG,753551.0,,300.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000704,PT-9pirK7,OAW42,OAW42,46.0,Commercial,SIDM00480,CVCL_1615,SOC,Adult,Adherent,,Metastatic,ascites,Female,ECACC,,85073102,OAW42_OVARY,910548.0,,782.0,,,,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000705,PT-ZglKg6,LC-1F,LC1F,69.0,Commercial,SIDM00298,CVCL_1372,LUSC,Adult,Mixed,,Primary,lung,Male,RIKEN,NSCLC_squamous,RCB0439,LC1F_LUNG,,,,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000706,PT-srkn4o,EKVX,EKVX,,Academic lab,SIDM00119,CVCL_1195,LUAD,Unknown,Adherent,,Primary,lung,Male,Meyerson (Broad) who received from Minna lab,NSCLC_adenocarcinoma,,EKVX_LUNG,905970.0,,322.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000707,PT-kbk41J,P3HR-1,P3HR1,7.0,Commercial,SIDM01254,CVCL_2676,BL,Pediatric,Suspension,,Primary,ascites,Male,ATCC,b_cell_burkitt,HTB-62,P3HR1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,Unknown,MF-001-020,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000708,PT-dNJJRP,SNU-283,SNU283,62.0,Commercial,SIDM00215,CVCL_5044,READ,Adult,Adherent,,Metastatic,abdomen,Female,KCLB,,,SNU283_LARGE_INTESTINE,1659929.0,,2189.0,,,,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000709,PT-TF1Jzt,KMRC-2,KMRC2,,Commercial,,CVCL_2984,CCRCC,Adult,Adherent,,Primary,kidney,Male,HSRRB,clear_cell,,KMRC2_KIDNEY,,,,,,MF-004-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000710,PT-brxGNT,NCI-H854,NCIH854,75.0,Commercial,,CVCL_A584,COAD,Adult,Suspension,,Primary,lung,Male,KCLB,NSCLC_adenocarcinoma,,NCIH854_LUNG,,,,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000711,PT-K0vetf,JIMT-1,JIMT1,62.0,Commercial,SIDM01037,CVCL_2077,IDC,Adult,Adherent,basal_A,Metastatic,pleural_effusion,Female,DSMZ,ERneg_HER2pos,ACC 589,JIMT1_BREAST,1298157.0,,479.0,,,MF-002-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000712,PT-0H6Zc0,HCC-1833,HCC1833,69.0,Commercial,,CVCL_5129,LUAD,Adult,Adherent,,Primary,lung,Female,KCLB,NSCLC_adenocarcinoma,,HCC1833_LUNG,,,,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000713,PT-FQOeFS,Caov-3,CAOV3,54.0,Commercial,SIDM00919,CVCL_0201,HGSOC,Adult,Adherent,,Primary,ovary,Female,ATCC,high_grade_serous,HTB-75,CAOV3_OVARY,906825.0,,320.0,,,MF-002-001,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000714,PT-KR5FTA,KMS-11,KMS11,67.0,Commercial,SIDM00608,CVCL_2989,PCM,Adult,Suspension,,Primary,pleural_effusion,Female,HSRRB,,JCRB1179,KMS11_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1659817.0,,1308.0,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000715,PT-JkXmPN,SNU-1214,SNU1214,55.0,Commercial,SIDM00167,CVCL_5017,LXSC,Adult,Adherent,,,upper_aerodigestive_tract,Male,KCLB,laryngeal,1214,SNU1214_UPPER_AERODIGESTIVE_TRACT,,,,,,,None,LXSC,Larynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000716,PT-EhboSJ,TT2609-C02,TT2609C02,57.0,Commercial,SIDM00418,CVCL_2218,THFO,Adult,Adherent,,Primary,thyroid,Male,DSMZ,follicular,ACC 510,TT2609C02_THYROID,1240223.0,,1457.0,,,MF-001-020,None,THFO,Follicular Thyroid Cancer,Well-Differentiated Thyroid Cancer,Thyroid +ACH-000717,PT-es34jp,COLO-680N,COLO680N,57.0,Commercial,SIDM00956,CVCL_1131,ESCC,Adult,Adherent,,Primary,oesophagus,Female,DSMZ,,ACC 182,COLO680N_OESOPHAGUS,906817.0,,1469.0,,,,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000718,PT-8wDCNH,NCI-H2291,NCIH2291,,Commercial,SIDM00728,CVCL_1546,LUAD,Unknown,Adherent,,Metastatic,lymph_node,Male,ATCC,NSCLC_adenocarcinoma,CRL-5939,NCIH2291_LUNG,724874.0,,917.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000719,PT-bnZfQQ,RMG-I,RMGI,34.0,Commercial,SIDM00352,CVCL_1662,CCOV,Adult,Adherent,,Metastatic,ascites,Female,HSRRB,clear_cell,IFO50315,RMGI_OVARY,909699.0,,1162.0,,,MF-001-001,None,CCOV,Clear Cell Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000720,PT-ACqBkd,TCCSUP,TCCSUP,67.0,Commercial,SIDM01190,CVCL_1738,BLCA,Adult,Adherent,,Primary,urinary_tract,Female,ATCC,bladder_transitional_cell,HTB-5,TCCSUP_URINARY_TRACT,687459.0,,275.0,,,,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000721,PT-tXW4rS,HMC-1-8,HMC18,35.0,Commercial,,CVCL_2949,IDC,Adult,Adherent,basal_B,Metastatic,pleural_effusion,Female,HSRRB,ERneg_HER2neg,JCRB0166,HMC18_BREAST,,,,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000722,PT-04KbrE,SNU-C1,SNUC1,71.0,Commercial,SIDM01197,CVCL_1708,COAD,Adult,Mixed,,Metastatic,abdomen,Male,ATCC,,,SNUC1_LARGE_INTESTINE,910905.0,,1066.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000723,PT-eFL4J2,YD-10B,YD10B,67.0,Commercial,,CVCL_8929,OCSC,Adult,Adherent,,,upper_aerodigestive_tract,Male,KCLB,tongue,60503,YD10B_UPPER_AERODIGESTIVE_TRACT,,,,,,,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000724,PT-B0Dqk6,HT-1376,HT1376,58.0,Commercial,SIDM00678,CVCL_1292,BLCA,Adult,Adherent,,Primary,urinary_tract,Female,ATCC,,CRL-1472,HT1376_URINARY_TRACT,907066.0,,1211.0,,,MF-006-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000725,PT-gUhFHU,HCC202,HCC202,82.0,Commercial,SIDM00870,CVCL_2062,DCIS,Adult,Adherent,HER2_amp,Primary,breast,Female,ATCC,ERneg_HER2pos,,HCC202_BREAST,1290906.0,,1552.0,,,MF-001-001,None,DCIS,Breast Ductal Carcinoma In Situ,Breast Ductal Carcinoma In Situ,Breast +ACH-000726,PT-t6LEYh,TE-14,TE14,57.0,Commercial,,CVCL_3336,ESCC,Adult,Adherent,,,oesophagus,Male,RIKEN,,RCB2101,TE14_OESOPHAGUS,,,,,,,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000727,PT-6N2wxK,NCI-H2066,NCIH2066,70.0,Commercial,SIDM00711,CVCL_1520,SCLC,Adult,Adherent,,Primary,lung,Female,ATCC,,CRL-5917,NCIH2066_LUNG,1330973.0,,1073.0,,,MF-007-010,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000728,PT-pKQIGg,KASUMI-2,KASUMI2,15.0,Commercial,,CVCL_0590,BLL,Pediatric,Adherent,,,bone_marrow,Male,DSMZ,b_cell,ACC 526,KASUMI2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000729,PT-LzHDTV,NCI-H1963,NCIH1963,56.0,Commercial,SIDM00760,CVCL_1510,SCLC,Adult,Suspension,,Primary,lung,Male,ATCC,,CRL-5982,NCIH1963_LUNG,688010.0,,1570.0,,,MF-001-020,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000730,PT-2vBUWf,SK-MEL-5,SKMEL5,24.0,Commercial,SIDM00080,CVCL_0527,SKCM,Adult,Adherent,,Metastatic,lymph_node,Female,ATCC,,HTB-70,SKMEL5_SKIN,905956.0,,1491.0,,,MF-006-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000731,PT-GWlgbv,HCC-2279,HCC2279,52.0,Commercial,,CVCL_5131,LUAS,Adult,Adherent,,Primary,lung,Female,KCLB,NSCLC_adenocarcinoma,,HCC2279_LUNG,,,,,,,None,LUAS,Lung Adenosquamous Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000732,PT-mK3rFG,PE/CA-PJ41 (clone D2),PECAPJ41CLONED2,67.0,Commercial,,CVCL_2680,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Female,ECACC,oral,98020207,PECAPJ41CLONED2_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-005-002,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000733,PT-eGglPA,NCI-H1838,NCIH1838,,Commercial,SIDM00769,CVCL_1499,LUAD,Unknown,Adherent,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,CRL-5899,NCIH1838_LUNG,687807.0,,1690.0,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000734,PT-s6JoAb,JHH-5,JHH5,50.0,Commercial,,CVCL_0364,HCC,Adult,Adherent,,Primary,liver,Male,HSRRB,,JCRB1029,JHH5_LIVER,,,,,,MF-022-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000735,PT-M3R2ei,PE/CA-PJ49,PECAPJ49,57.0,Commercial,,CVCL_2681,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,ECACC,oral,60606,PECAPJ49_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-005-002,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000736,PT-2GXHBV,SNU-601,SNU601,34.0,Commercial,,CVCL_0101,SSRCC,Adult,Adherent,,Metastatic,ascites,Male,KCLB,signet_ring_cell,601,SNU601_STOMACH,,,,,,MF-001-001,None,SSRCC,Signet Ring Cell Carcinoma of the Stomach,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000737,PT-VZM6YM,NCI-H1385,NCIH1385,49.0,Commercial,,CVCL_1466,LUSC,Adult,Suspension,,Metastatic,lymph_node,Female,ATCC,NSCLC_squamous,CRL-5867,NCIH1385_LUNG,,,,,,,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000738,PT-8oCN4x,GB-1,GB1,35.0,Commercial,SIDM00581,CVCL_1227,GB,Adult,Adherent,,Primary,central_nervous_system,Male,HSRRB,glioblastoma,IFO50489,GB1_CENTRAL_NERVOUS_SYSTEM,687568.0,,2095.0,,,MF-006-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000739,PT-qL6HtY,Hep G2,HEPG2,15.0,Commercial,SIDM00904,CVCL_0027,LIHB,Pediatric,Adherent,,Primary,liver,Male,ATCC,,HB-8065,HEPG2_LIVER,,,,,,MF-006-001,None,LIHB,Hepatoblastoma,Hepatoblastoma,Liver +ACH-000740,PT-T4PL7e,A-253,A253,54.0,Commercial,SIDM00796,CVCL_1060,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,ATCC,salivary_gland,HTB-41,A253_SALIVARY_GLAND,906794.0,,2089.0,,,MF-023-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000741,PT-iooYtf,U-BLC1,UBLC1,84.0,Commercial,,CVCL_2738,BLCA,Adult,Adherent,,Primary,urinary_tract,Female,ECACC,bladder_transitional_cell,6013102,UBLC1_URINARY_TRACT,,,,,,MF-010-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000742,PT-i0Kb8s,DM-3,DM3,62.0,Commercial,SIDM01505,CVCL_2019,ZFIBLUN,Adult,Adherent,,,fibroblast,Male,DSMZ,,,DM3_FIBROBLAST,,,,,,,None,,"Fibroblast, Lung",Non-Cancerous,Fibroblast +ACH-000743,PT-WpdjRA,COR-L95,CORL95,64.0,Commercial,SIDM00521,CVCL_2418,SCLC,Adult,Suspension,,Primary,lung,Male,ECACC,,,CORL95_LUNG,1297439.0,,1769.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000744,PT-9tlxuS,NCI-H1623,NCIH1623,58.0,Commercial,SIDM00747,CVCL_1481,LUAD,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,NSCLC_adenocarcinoma,CRL-5881,NCIH1623_LUNG,687798.0,,1238.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000745,PT-A75zAQ,MOLP-8,MOLP8,52.0,Commercial,SIDM00434,CVCL_2124,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,,,MOLP8_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330950.0,,924.0,,,,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000746,PT-dpLnUY,GSS,GSS,75.0,Commercial,,CVCL_8876,STAD,Adult,Suspension,,Metastatic,liver,Male,RIKEN,,RCB2277,GSS_STOMACH,,,,,,MF-001-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000747,PT-CmsNht,NCI-H1703,NCIH1703,54.0,Commercial,SIDM00740,CVCL_1490,LUSC,Adult,Adherent,,Primary,lung,Male,ATCC,NSCLC_squamous,CRL-5889,NCIH1703_LUNG,908474.0,,1239.0,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000748,PT-OexHxF,SJSA-1,SJSA1,19.0,Commercial,SIDM01112,CVCL_1697,OS,Adult,Adherent,,Primary,bone,Male,ATCC,,CRL-2098,SJSA1_BONE,909717.0,,1180.0,,,MF-001-001,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-000749,PT-d1NyBL,DMS 273,DMS273,50.0,Commercial,SIDM00522,CVCL_1176,SCLC,Adult,Adherent,,Metastatic,pleural_effusion,Female,ECACC,,95062830,DMS273_LUNG,687985.0,,1862.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000750,PT-jI6Xhs,LOX IMVI,LOXIMVI,58.0,Academic lab,SIDM00149,CVCL_1381,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,NCI/DCTD,,Cannot find NCI/DCTD link,LOXIMVI_SKIN,905974.0,,401.0,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000751,PT-0HjWKA,OCI-M1,OCIM1,62.0,Commercial,SIDM00458,CVCL_2149,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Unknown,DSMZ,M6,ACC 529,OCIM1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330985.0,,1679.0,,,MF-005-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000752,PT-8aORoW,NCI-H196,NCIH196,68.0,Commercial,SIDM00761,CVCL_1509,SCLC,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,,CRL-5823,NCIH196_LUNG,1240186.0,,1250.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000753,PT-Jv3gwf,JMSU-1,JMSU1,75.0,Commercial,,CVCL_2081,BLCA,Adult,Adherent,,Metastatic,ascites,Male,DSMZ,,505,JMSU1_URINARY_TRACT,,,,,,MF-001-003,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000754,PT-Pi0OS5,L-428,L428,37.0,Commercial,SIDM00327,CVCL_1361,HL,Adult,Suspension,,,pleural_effusion,Female,DSMZ,,,L428_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907322.0,,1804.0,,,MF-001-001,None,HL,Hodgkin Lymphoma,Hodgkin Lymphoma,Lymphoid +ACH-000755,PT-DxHqyx,HCC2218,HCC2218,38.0,Commercial,SIDM00772,CVCL_1263,DCIS,Adult,Suspension,HER2_amp,Primary,breast,Female,ATCC,ERneg_HER2pos,,HCC2218_BREAST,749716.0,,352.0,,,MF-001-001,None,DCIS,Breast Ductal Carcinoma In Situ,Breast Ductal Carcinoma In Situ,Breast +ACH-000756,PT-cJo3y3,GI-1,GI1,61.0,Commercial,SIDM00273,CVCL_1231,GSARC,Adult,Adherent,,Primary,central_nervous_system,Male,RIKEN,glioblastoma,RCB0763,GI1_CENTRAL_NERVOUS_SYSTEM,906871.0,,245.0,,,MF-002-001,None,GSARC,Gliosarcoma,Diffuse Glioma,CNS/Brain +ACH-000757,PT-kI5CjI,A427,A427,52.0,Academic lab,SIDM00810,CVCL_1055,LUAD,Adult,Adherent,,Primary,lung,Male,Meyerson (Broad) who received from DFCI,NSCLC_adenocarcinoma,,A427_LUNG,910851.0,,1839.0,,,MF-002-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000758,PT-T2KFTw,MKN74,MKN74,37.0,Commercial,SIDM00248,CVCL_2791,TSTAD,Adult,Adherent,,Metastatic,liver,Male,HSRRB,,JCRB0255,MKN74_STOMACH,,,,,,MF-001-001,None,TSTAD,Tubular Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000759,PT-maODOx,MDA-MB-175-VII,MDAMB175VII,56.0,Commercial,SIDM00633,CVCL_1400,IDC,Adult,Adherent,HER2_amp,Metastatic,pleural_effusion,Female,ATCC,ERpos_HER2neg,HTB-25,MDAMB175VII_BREAST,908120.0,,50.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000760,PT-zboiLS,LNZ308,LNZ308,60.0,Academic lab,SIDM00682,CVCL_0394,GB,Adult,Adherent,,Primary,central_nervous_system,Male,Linda Chin,glioblastoma,,LNZ308_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000761,PT-TR7wlO,NUGC-2,NUGC2,56.0,Commercial,,CVCL_1611,STAD,Adult,Adherent,,Metastatic,lymph_node,Female,HSRRB,,,NUGC2_STOMACH,,,,,,MF-001-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000762,PT-M2rHki,YD-38,YD38,67.0,Commercial,,CVCL_L083,HNSC,Adult,Adherent,,,upper_aerodigestive_tract,Male,KCLB,,60508,YD38_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-001-001,None,HNSC,Head and Neck Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000763,PT-wvxTew,MM1-S,MM1S,45.0,Academic lab,SIDM01265,CVCL_8792,PCM,Adult,Mixed,,Primary,haematopoietic_and_lymphoid_tissue,Female,Received from CCLE; originally academic lab,,,MM1S_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1659818.0,,995.0,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000764,PT-dxw7SI,SH-10-TC,SH10TC,,Commercial,,CVCL_5167,MSTAD,Unknown,Adherent,,Primary,stomach,Unknown,RIKEN,mucinous,RCB1940,SH10TC_STOMACH,,,,,,MF-001-001,None,MSTAD,Mucinous Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000765,PT-mH5ckQ,WM-983B,WM983B,54.0,Academic lab,,CVCL_6809,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,Received from CCLE; originally academic lab,,,WM983B_SKIN,,,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000766,PT-wZGKqJ,NCI-H1648,NCIH1648,39.0,Commercial,SIDM00746,CVCL_1482,LUAD,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,NSCLC_adenocarcinoma,CRL-5882,NCIH1648_LUNG,687799.0,,712.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000767,PT-1nXRn7,NCI-H526,NCIH526,55.0,Commercial,SIDM01128,CVCL_1569,SCLC,Adult,Suspension,,Metastatic,bone_marrow,Male,ATCC,,,NCIH526_LUNG,688025.0,,1380.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000768,PT-pYG6Rc,MDA-MB-231,MDAMB231,51.0,Commercial,SIDM00146,CVCL_0062,BRCA,Adult,Adherent,basal_B,Metastatic,pleural_effusion,Female,ATCC,ERneg_HER2neg,HTB-26,MDAMB231_BREAST,905960.0,,1013.0,,,MF-001-001,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000769,PT-U2PG43,LK-2,LK2,74.0,Commercial,SIDM00548,CVCL_1377,LUSC,Adult,Adherent,,Primary,lung,Male,RIKEN,NSCLC_squamous,RCB1970,LK2_LUNG,687787.0,,45.0,,,MF-002-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000770,PT-7N6azV,P31/FUJ,P31FUJ,7.0,Commercial,SIDM00363,CVCL_1632,AML,Pediatric,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,HSRRB,M5,,P31FUJ_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909253.0,,642.0,,,MF-001-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-000771,PT-59aO2P,BICR 56,BICR56,,Commercial,,CVCL_2313,OCSC,Unknown,Adherent,,Primary,upper_aerodigestive_tract,Female,ECACC,oral,6031002,BICR56_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-002-004,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000772,PT-nDp3Xt,TE 441.T,TE441T,14.0,Commercial,SIDM01173,CVCL_1754,RMS,Pediatric,Adherent,CIC_DUX4,,soft_tissue,Female,ATCC,,CRL-7767,TE441T_SOFT_TISSUE,924248.0,,298.0,,,MF-002-001,None,RMS,Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-000773,PT-vEVB0H,Ki-JK,KIJK,15.0,Commercial,,CVCL_2093,ALCLALKP,Pediatric,Suspension,,,pleural_effusion,Male,HSRRB via Academic lab?,t_cell_ALCL,,KIJK_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,ALCLALKP,Anaplastic Large-Cell Lymphoma ALK Positive,Non-Hodgkin Lymphoma,Lymphoid +ACH-000774,PT-lbbkFm,RERF-LC-Ad2,RERFLCAD2,,Commercial,,CVCL_1652,LUAD,Unknown,Adherent,,Primary,lung,Male,HSRRB,NSCLC_adenocarcinoma,JCRB1021,RERFLCAD2_LUNG,,,,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000775,PT-u3m7Of,NCI-H727,NCIH727,65.0,Commercial,SIDM01119,CVCL_1584,LUCA,Adult,Adherent,,Primary,lung,Female,ATCC,,CRL-5815,NCIH727_LUNG,724855.0,,341.0,,,MF-001-001,None,LUCA,Lung Carcinoid,Lung Neuroendocrine Tumor,Lung +ACH-000776,PT-DtdDWT,ONS-76,ONS76,2.0,Commercial,SIDM00567,CVCL_1624,MBL,Pediatric,Adherent,non_MYC,Primary,central_nervous_system,Female,HSRRB,,IFO50355,ONS76_CENTRAL_NERVOUS_SYSTEM,909248.0,,67.0,,,MF-001-001,None,MBL,Medulloblastoma,Embryonal Tumor,CNS/Brain +ACH-000777,PT-kporZQ,KYSE-30,KYSE30,64.0,Commercial,SIDM00015,CVCL_1351,ESCC,Adult,Adherent,,Primary,oesophagus,Male,DSMZ,,ACC 351,KYSE30_OESOPHAGUS,,,,,,,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000778,PT-XJviYz,HSC-3,HSC3,64.0,Commercial,SIDM00589,CVCL_1288,OCSC,Adult,Adherent,,Metastatic,upper_aerodigestive_tract,Male,HSRRB,,JCRB0623,HSC3_UPPER_AERODIGESTIVE_TRACT,907061.0,,648.0,,,MF-006-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000779,PT-nDRyc6,,PC9,45.0,Academic lab,SIDM00236,CVCL_B260,LUAD,Adult,Adherent,,Primary,lung,Male,see comment,NSCLC_adenocarcinoma,,PC9_LUNG,,,,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000780,PT-SCGBeX,NCI-H1105,NCIH1105,73.0,Commercial,SIDM00652,CVCL_1455,SCLC,Adult,Suspension,,Metastatic,lymph_node,Male,ATCC,,CRL-5856,NCIH1105_LUNG,908468.0,,128.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000781,PT-CKs1VS,NCI-H2023,NCIH2023,26.0,Commercial,SIDM00753,CVCL_1515,LUAD,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,NSCLC_adenocarcinoma,CRL-5912,NCIH2023_LUNG,1240187.0,,1266.0,,,MF-007-010,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000782,PT-IjgcRg,SEM,SEM,5.0,Commercial,,CVCL_0095,BLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,b_cell,ACC 546,SEM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-005-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000783,PT-dK1tBm,CAMA-1,CAMA1,51.0,Commercial,SIDM00920,CVCL_1115,ILC,Adult,Adherent,luminal,Metastatic,pleural_effusion,Female,ATCC,ERpos_HER2neg,HTB-21,CAMA1_BREAST,946382.0,,363.0,,,MF-006-001,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000784,PT-YTdWR1,KYSE-70,KYSE70,77.0,Commercial,SIDM01024,CVCL_1356,ESCC,Adult,Adherent,,Primary,oesophagus,Male,DSMZ,,ACC 363,KYSE70_OESOPHAGUS,753576.0,,2219.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000785,PT-AOPcW9,NCI-H2126,NCIH2126,65.0,Commercial,SIDM00775,CVCL_1532,LUAD,Adult,Adherent,,Metastatic,haematopoietic_and_lymphoid_tissue,Male,ATCC,NSCLC_adenocarcinoma,CCL-256,NCIH2126_LUNG,,,,,,MF-007-010,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000786,PT-ieeLlY,Daudi,DAUDI,16.0,Commercial,SIDM00845,CVCL_0008,BL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,ATCC,b_cell_burkitt,CCL-213,DAUDI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906831.0,,1783.0,,Unknown,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000787,PT-w7dxuB,LXF-289,LXF289,62.0,Commercial,SIDM00339,CVCL_1394,LUAD,Adult,Adherent,,Primary,lung,Male,DSMZ,NSCLC_adenocarcinoma,ACC 265,LXF289_LUNG,753592.0,,1175.0,,,MF-004-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000788,PT-ZSJTWI,A2058,A2058,43.0,Commercial,SIDM00797,CVCL_1059,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,,CRL-11147,A2058_SKIN,906792.0,,652.0,,,MF-002-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000789,PT-wTzkNy,NCI-H810,NCIH810,51.0,Commercial,SIDM01116,CVCL_1590,LCLC,Adult,Adherent,,Primary,lung,Male,ATCC,NSCLC_large_cell,CRL-5816,NCIH810_LUNG,925341.0,,1104.0,,,,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000790,PT-EI5eP1,SHP-77,SHP77,54.0,Commercial,SIDM01078,CVCL_1693,SCLC,Adult,Mixed,,Primary,lung,Male,ATCC,,CRL-2195,SHP77_LUNG,724872.0,,1479.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000791,PT-sAWSgy,RERF-LC-Ad1,RERFLCAD1,70.0,Commercial,,CVCL_1651,LUAD,Adult,Adherent,,Primary,lung,Male,HSRRB,NSCLC_adenocarcinoma,JCRB1020,RERFLCAD1_LUNG,,,,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000792,PT-FrUuvH,BFTC-909,BFTC909,64.0,Commercial,SIDM00988,CVCL_1084,RCC,Adult,Adherent,,Primary,kidney,Male,DSMZ,transitional_cell,ACC 367,BFTC909_KIDNEY,910698.0,,1284.0,,,MF-002-001,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000793,PT-xOmD9v,KATO III,KATOIII,57.0,Commercial,SIDM00687,CVCL_0371,SSRCC,Adult,Mixed,,Metastatic,pleural_effusion,Male,ATCC,signet_ring_cell,HTB-103,KATOIII_STOMACH,907276.0,,406.0,,,MF-005-004,None,SSRCC,Signet Ring Cell Carcinoma of the Stomach,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000794,PT-zkbKhd,BICR 22,BICR22,88.0,Commercial,SIDM00485,CVCL_2310,OCSC,Adult,Adherent,,Metastatic,lymph_node,Male,ECACC,oral,4072106,BICR22_UPPER_AERODIGESTIVE_TRACT,1240121.0,,1575.0,,,MF-002-004,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000795,PT-ZUsqVo,MOLT-13,MOLT13,2.0,Commercial,SIDM00433,CVCL_1422,TLL,Pediatric,Suspension,,,bone_marrow,Female,DSMZ,t_cell,436,MOLT13_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908146.0,,86.0,,,MF-001-020,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000796,PT-Tlf0ul,MCAS,MCAS,60.0,Commercial,SIDM00008,CVCL_3020,MOV,Adult,Adherent,,Primary,ovary,Female,HSRRB,mucinous,JCRB0240,MCAS_OVARY,,,,,,,None,MOV,Mucinous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000797,PT-iFasxu,HLF-a,HLFA,54.0,Commercial,,CVCL_2255,ZFIBLUN,Adult,Adherent,,Primary,fibroblast,Female,ATCC,,,HLFA_FIBROBLAST,,,,,,MF-015-001,None,,"Fibroblast, Lung",Non-Cancerous,Fibroblast +ACH-000798,PT-maJywx,CL-40,CL40,,Commercial,SIDM00960,CVCL_1982,COAD,Unknown,Adherent,,Primary,Colon,Female,DSMZ,,,CL40_LARGE_INTESTINE,1240124.0,,555.0,,,MF-007-019,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000799,PT-mZ69Vl,Hs 695T,HS695T,26.0,Commercial,,CVCL_0851,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,amelanotic,HTB-137,HS695T_SKIN,,,,,,MF-006-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000800,PT-RmrNlb,NCI-H446,NCIH446,61.0,Commercial,SIDM00965,CVCL_1562,SCLC,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,,HTB-171,NCIH446_LUNG,688023.0,,1222.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000801,PT-1I8hCi,Hs 936.T,HS936T,,Commercial,,CVCL_1033,MEL,Unknown,Adherent,,Primary,skin,Male,ATCC,,,HS936T_SKIN,,,,,,MF-002-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000802,PT-YqLKaW,BFTC-905,BFTC905,51.0,Commercial,SIDM00989,CVCL_1083,BLCA,Adult,Adherent,,Primary,urinary_tract,Female,DSMZ,bladder_transitional_cell,361,BFTC905_URINARY_TRACT,910926.0,,1583.0,,,MF-002-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000803,PT-dQkCfQ,COLO 668,COLO668,47.0,Commercial,SIDM00143,CVCL_1128,SCLC,Adult,Suspension,,Metastatic,central_nervous_system,Female,ECACC,,87061209,COLO668_LUNG,910692.0,,1072.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000804,PT-dk8yt2,NB-1,NB1,2.0,Commercial,SIDM00578,CVCL_1440,NBL,Pediatric,Adherent,MYCN_amp,Metastatic,lymph_node,Male,HSRRB,,IFO50295,NB1_AUTONOMIC_GANGLIA,949179.0,,127.0,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-000805,PT-SscYEx,COLO-679,COLO679,47.0,Commercial,SIDM00284,CVCL_1130,SKCM,Adult,Adherent,,Metastatic,skin,Female,DSMZ,,ACC 264,COLO679_SKIN,906818.0,,2049.0,,,MF-001-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000806,PT-COK0Ia,L-540,L540,20.0,Commercial,SIDM00329,CVCL_1362,HL,Adult,Suspension,,,bone_marrow,Female,DSMZ,,,L540_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907323.0,SNP fingerprinting rules out CCRF-CEM contamination.,651.0,,,MF-001-020,None,HL,Hodgkin Lymphoma,Hodgkin Lymphoma,Lymphoid +ACH-000807,PT-Yppu5U,SNU-738,SNU738,40.0,Commercial,,CVCL_5087,ODG,Adult,Adherent,,Primary,central_nervous_system,Male,KCLB,oligodendroglioma,,SNU738_CENTRAL_NERVOUS_SYSTEM,,,,,,,None,ODG,Oligodendroglioma,Diffuse Glioma,CNS/Brain +ACH-000808,PT-jPUQ9m,HuH28,HUH28,37.0,Commercial,,CVCL_2955,IHCH,Adult,Adherent,,Primary,biliary_tract,Female,HSRRB,intrahepatic,JCRB0426,HUH28_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-000809,PT-zFPWWq,KYSE-410,KYSE410,51.0,Commercial,SIDM01028,CVCL_1352,ESCC,Adult,Adherent,,Primary,oesophagus,Male,DSMZ,,ACC 381,KYSE410_OESOPHAGUS,753574.0,,952.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000810,PT-1TshCj,SK-MEL-30,SKMEL30,67.0,Commercial,SIDM00392,CVCL_0039,SKCM,Adult,Adherent,,Metastatic,skin,Male,DSMZ,,ACC 151,SKMEL30_SKIN,909726.0,,1789.0,,,MF-001-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000811,PT-RV3Y6W,SK-OV-3,SKOV3,64.0,Commercial,SIDM00079,CVCL_0532,SOC,Adult,Adherent,,Metastatic,ascites,Female,ATCC,endometrioid,HTB-77,SKOV3_OVARY,905959.0,,1166.0,,,MF-023-001,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000812,PT-WHZxXI,COLO-783,COLO783,48.0,Commercial,SIDM00955,CVCL_1997,MEL,Adult,Adherent,,Metastatic,lymph_node,Female,DSMZ,,ACC 257,COLO783_SKIN,1240125.0,,857.0,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000813,PT-4bJRaf,T3M-10,T3M10,40.0,Commercial,,CVCL_8067,LCLC,Adult,Adherent,,Metastatic,lung,Male,RIKEN,NSCLC_large_cell,RCB1020,T3M10_LUNG,,,,,,,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000814,PT-2OcAGh,Hs 939.T,HS939T,24.0,Commercial,SIDM00663,CVCL_1036,MEL,Adult,Adherent,,Primary,skin,Female,ATCC,,Discontinued,HS939T_SKIN,1298144.0,,1261.0,,,MF-002-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000815,PT-6Uzxpn,KM-H2,KMH2,37.0,Commercial,SIDM01018,CVCL_1330,HL,Adult,Suspension,,Metastatic,pleural_effusion,Male,DSMZ,,ACC 8,KMH2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909976.0,,313.0,,,,None,HL,Hodgkin Lymphoma,Hodgkin Lymphoma,Lymphoid +ACH-000816,PT-veV7dF,NCI-H524,NCIH524,63.0,Commercial,SIDM01129,CVCL_1568,SCLC,Adult,Suspension,,Metastatic,lymph_node,Male,ATCC,,CRL-5831,NCIH524_LUNG,908483.0,,2147.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000817,PT-pWj35D,RPMI 8226,RPMI8226,61.0,Commercial,SIDM00087,CVCL_0014,PCM,Adult,Mixed,,Primary,haematopoietic_and_lymphoid_tissue,Male,ATCC,plasmacytoma,,RPMI8226_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,905964.0,,705.0,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000818,PT-EQndr2,BT-483,BT483,23.0,Commercial,SIDM00892,CVCL_2319,IDC,Adult,Adherent,luminal,Primary,breast,Female,ATCC,ERpos_HER2neg,,BT483_BREAST,949093.0,,1231.0,,,,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000819,PT-1DyLm0,LN-18,LN18,65.0,Commercial,SIDM00685,CVCL_0392,GB,Adult,Adherent,,Primary,central_nervous_system,Male,ATCC,glioblastoma,CRL-2610,LN18_CENTRAL_NERVOUS_SYSTEM,1240168.0,,1503.0,,,MF-002-008,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000820,PT-EteVig,SW403,SW403,51.0,Commercial,SIDM00836,CVCL_0545,COAD,Adult,Adherent,,Primary,Colon,Female,ATCC,,,SW403_LARGE_INTESTINE,,,,,,MF-021-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000821,PT-G4TwMh,EJM,EJM,58.0,Commercial,SIDM01048,CVCL_2030,PCM,Adult,Mixed,,Primary,ascites,Female,DSMZ,,ACC-560,EJM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1297447.0,,567.0,,,MF-005-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000822,PT-n2hnAf,SK-MEL-24,SKMEL24,67.0,Commercial,SIDM01106,CVCL_0599,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,,HTB-71,SKMEL24_SKIN,909725.0,,945.0,,,MF-006-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000823,PT-O7zBRO,KYSE-140,KYSE140,54.0,Commercial,SIDM01032,CVCL_1347,ESCC,Adult,Adherent,,Primary,oesophagus,Male,DSMZ,,ACC 348,KYSE140_OESOPHAGUS,753573.0,,951.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000824,PT-ItKoPJ,KYSE-510,KYSE510,67.0,Commercial,SIDM01026,CVCL_1354,ESCC,Adult,Adherent,,Primary,oesophagus,Female,DSMZ,,ACC 374,KYSE510_OESOPHAGUS,907321.0,,893.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000825,PT-fbGZ8j,HOP-92,HOP92,62.0,Academic lab,SIDM00134,CVCL_1286,NSCLC,Adult,Mixed,,Primary,lung,Male,Meyerson (Broad) who received from Minna,,,HOP92_LUNG,905973.0,,888.0,,,,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-000826,PT-nAjtb0,CAL-12T,CAL12T,,Commercial,SIDM00939,CVCL_1105,NSCLC,Unknown,Adherent,,Primary,lung,Male,DSMZ,,ACC 443,CAL12T_LUNG,753540.0,,2252.0,,,MF-002-001,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-000827,PT-L3eOYW,WM-793,WM793,37.0,Academic lab,SIDM00973,CVCL_8787,MEL,Adult,Adherent,,Primary,skin,Male,The Wistar Institute,,Cannot find WISTAR website,WM793_SKIN,1299081.0,,114.0,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000828,PT-mV0nNw,ZR-75-30,ZR7530,47.0,Commercial,SIDM00971,CVCL_1661,ILC,Adult,Adherent,HER2_amp,Metastatic,ascites,Female,ATCC,ERpos_HER2pos,,ZR7530_BREAST,909907.0,,429.0,,,MF-001-001,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000829,PT-h5fVs5,HuNS1,HUNS1,,Commercial,,CVCL_2526,PCM,Unknown,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,ATCC,,,HUNS1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-017,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000830,PT-Fd4LwY,NCI-H1436,NCIH1436,39.0,Commercial,SIDM00697,CVCL_1471,SCLC,Adult,Suspension,,Metastatic,lymph_node,Male,ATCC,,,NCIH1436_LUNG,908469.0,,2120.0,,,MF-007-010,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000831,PT-cmj7jX,HEC-50B,HEC50B,,Commercial,,CVCL_2929,UCEC,Unknown,Adherent,,Metastatic,ascites,Female,HSRRB,,JCRB1145,HEC50B_ENDOMETRIUM,,,,,,,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000832,PT-JCJHPr,CAL 27,CAL27,56.0,Commercial,SIDM00937,CVCL_1107,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,ATCC,,CRL-2095,CAL27_UPPER_AERODIGESTIVE_TRACT,910916.0,,1911.0,,,MF-002-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000833,PT-lbYOig,RH-30,RH30,17.0,Commercial,,CVCL_0041,ARMS,Pediatric,Adherent,,Metastatic,bone_marrow,Male,DSMZ via Schaefer (University of Zurich),alveolar,ACC 489,RH30_SOFT_TISSUE,,,,,,MF-001-001,None,ARMS,Alveolar Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-000834,PT-oxE5Td,UM-UC-1,UMUC1,26.0,Commercial,,CVCL_2743,BLCA,Adult,Adherent,,Metastatic,lymph_node,Male,ECACC,bladder_transitional_cell,6080301,UMUC1_URINARY_TRACT,,,,,,MF-006-002,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000835,PT-0RBdNq,GCT,GCT,29.0,Commercial,SIDM00853,CVCL_1229,MFH,Adult,Adherent,,Metastatic,soft_tissue,Male,ATCC,,TIB-223,GCT_SOFT_TISSUE,906999.0,,963.0,,,MF-023-001,None,MFH,Undifferentiated Pleomorphic Sarcoma/Malignant Fibrous Histiocytoma/High-Grade Spindle Cell Sarcoma,Undifferentiated Pleomorphic Sarcoma/Malignant Fibrous Histiocytoma/High-Grade Spindle Cell Sarcoma,Soft Tissue +ACH-000836,PT-ZS5SNw,YD-15,YD15,39.0,Commercial,,CVCL_8930,OCSC,Adult,Adherent,,,salivary_gland,Male,KCLB,tongue,60504,YD15_SALIVARY_GLAND,,,,,,MF-001-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000837,PT-9eMhTl,NCI-H322,NCIH322,52.0,Commercial,SIDM00117,CVCL_1556,LUAD,Adult,Adherent,,Primary,lung,Male,ECACC,NSCLC_adenocarcinoma,95111734,NCIH322_LUNG,,,,,,MF-001-003,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000838,PT-CmSm57,AMO-1,AMO1,64.0,Commercial,SIDM00993,CVCL_1806,PCM,Adult,Suspension,,Primary,ascites,Female,DSMZ,plasmacytoma,ACC 538,AMO1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1295741.0,,1204.0,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000839,PT-l3KlxJ,SCaBER,SCABER,58.0,Commercial,SIDM00032,CVCL_3599,BLSC,Adult,Adherent,,Primary,urinary_tract,Male,ATCC,bladder_squamous,HTB-3,SCABER_URINARY_TRACT,,,,,,,None,BLSC,Bladder Squamous Cell Carcinoma,Bladder Squamous Cell Carcinoma,Bladder/Urinary Tract +ACH-000840,PT-1JVU53,HCC-366,HCC366,80.0,Commercial,SIDM01070,CVCL_2059,LUAS,Adult,Adherent,,Primary,lung,Female,DSMZ,NSCLC_adenosquamous,,HCC366_LUNG,1240144.0,,638.0,,,MF-001-001,None,LUAS,Lung Adenosquamous Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000841,PT-lYuNel,NCI-H2087,NCIH2087,69.0,Commercial,SIDM00708,CVCL_1524,LUAD,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,NSCLC_adenocarcinoma,CRL-5922,NCIH2087_LUNG,724834.0,,915.0,,,MF-001-014,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000842,PT-IPboWn,SW 480,SW480,51.0,Commercial,SIDM00840,CVCL_0546,COAD,Adult,Adherent,,Primary,lymph_node,Male,ATCC,,CCL-228,SW480_LARGE_INTESTINE,,,,,,MF-021-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000843,PT-gQzNzd,HARA,HARA,57.0,Commercial,SIDM00598,CVCL_2914,LUSC,Adult,Adherent,,Metastatic,pleural_effusion,Male,HSRRB,NSCLC_squamous,JCRB1080.0,HARA_LUNG,1240142.0,,350.0,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000844,PT-fTe5Dw,DMS 454,DMS454,,Commercial,,CVCL_2438,SCLC,Unknown,Adherent,,Primary,lung,Male,ECACC,,,DMS454_LUNG,,,,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000845,PT-LL5Hxl,NCI-H1373,NCIH1373,56.0,Commercial,,CVCL_1465,LUAD,Adult,Adherent,,Primary,lung,Male,ATCC,NSCLC_adenocarcinoma,CRL-5866,NCIH1373_LUNG,,,,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000846,PT-tolPHE,FaDu,FADU,56.0,Commercial,SIDM00860,CVCL_1218,HPHSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,ATCC,,HTB-43,FADU_UPPER_AERODIGESTIVE_TRACT,906863.0,,1170.0,,,MF-006-001,None,HPHSC,Hypopharynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000847,PT-dAMXIu,HGC-27,HGC27,,Commercial,SIDM00290,CVCL_1279,STAD,Unknown,Adherent,,Metastatic,lymph_node,Unknown,ECACC,,94042256,HGC27_STOMACH,907055.0,,1102.0,,,MF-006-002,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000848,PT-WkfAGI,JHH-7,JHH7,53.0,Commercial,SIDM00614,CVCL_2805,HCC,Adult,Adherent,,Primary,liver,Male,HSRRB,,JCRB1031,JHH7_LIVER,1240160.0,,1038.0,,,MF-022-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-000849,PT-58loXx,MDA-MB-468,MDAMB468,51.0,Commercial,SIDM00628,CVCL_0419,BRCA,Adult,Adherent,basal_A,Metastatic,pleural_effusion,Female,ATCC,ERneg_HER2neg,HTB-132,MDAMB468_BREAST,908123.0,,415.0,,,MF-002-001,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000850,PT-Vb9Y0H,Hs 698.T,HS698T,70.0,Commercial,SIDM01705,CVCL_0855,ZFIBCOL,Adult,Adherent,,Metastatic,soft_tissue,Male,ATCC,,CRL-7435,HS698T_FIBROBLAST,,,,,,MF-002-001,None,,"Fibroblast, Colorectal",Non-Cancerous,Fibroblast +ACH-000851,PT-klVvXs,MOR/CPR,MORCPR,,Commercial,,CVCL_2620,LUAD,Unknown,Adherent,,Primary,lung,Unknown,ECACC,NSCLC_adenocarcinoma,,MORCPR_LUNG,,,,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000852,PT-9wHWAd,NCI-H1435,NCIH1435,35.0,Commercial,SIDM00658,CVCL_1470,LUAD,Adult,Mixed,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,CRL-5870,NCIH1435_LUNG,1298347.0,,2119.0,,,MF-001-014,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000853,PT-FGrsoV,NCI-H661,NCIH661,43.0,Commercial,SIDM01122,CVCL_1577,LCLC,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,NSCLC_large_cell,HTB-183,NCIH661_LUNG,687829.0,,107.0,,,MF-001-001,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000854,PT-y6VHrf,OCI-MY5,OCIMY5,,Academic lab,,CVCL_E332,PCM,Unknown,Mixed,,,haematopoietic_and_lymphoid_tissue,Male,Constantine (?),,,OCIMY5_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000855,PT-8JwTBr,KYSE-150,KYSE150,49.0,Commercial,SIDM01031,CVCL_1348,ESCC,Adult,Adherent,,Primary,oesophagus,Female,DSMZ,,ACC 375,KYSE150_OESOPHAGUS,907317.0,,407.0,,,MF-011-002,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000856,PT-PgOEtc,CAL-51,CAL51,45.0,Commercial,SIDM00933,CVCL_1110,BRCA,Adult,Adherent,basal_B,Metastatic,pleural_effusion,Female,DSMZ,ERneg_HER2neg,ACC 302,CAL51_BREAST,910927.0,,4.0,,,MF-002-009,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000857,PT-IcfZvW,CAL-85-1,CAL851,35.0,Commercial,SIDM00928,CVCL_1114,IDC,Adult,Adherent,basal_A,Primary,breast,Female,DSMZ,ERneg_HER2neg,,CAL851_BREAST,910852.0,,113.0,,,MF-002-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000858,PT-obWM4y,KNS-62,KNS62,49.0,Commercial,SIDM00606,CVCL_1335,LUSC,Adult,Adherent,,Metastatic,central_nervous_system,Male,ATCC,NSCLC_squamous,Cannot find on ATCC website,KNS62_LUNG,753569.0,,1369.0,,,MF-003-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000859,PT-603OA3,HCC1954,HCC1954,61.0,Commercial,SIDM00872,CVCL_1259,DCIS,Adult,Adherent,basal_A,Primary,breast,Female,ATCC,ERneg_HER2pos,CRL-2338,HCC1954_BREAST,749709.0,,2143.0,,,MF-001-001,None,DCIS,Breast Ductal Carcinoma In Situ,Breast Ductal Carcinoma In Situ,Breast +ACH-000860,PT-W8OaFq,NCI-H358,NCIH358,,Commercial,SIDM00718,CVCL_1559,LUAD,Unknown,Adherent,,Primary,lung,Male,ATCC,NSCLC_adenocarcinoma,CRL-5807,NCIH358_LUNG,908465.0,,1691.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000861,PT-ExToNn,HOP-62,HOP62,60.0,Academic lab,SIDM00133,CVCL_1285,LUAD,Adult,Adherent,,Primary,lung,Female,Meyerson (Broad) who received from Minna,NSCLC_adenocarcinoma,,HOP62_LUNG,905972.0,,1500.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000862,PT-y8P9Yk,KMBC-2,KMBC2,,Commercial,,CVCL_2977,BLCA,Unknown,Adherent,,Primary,urinary_tract,Unknown,HSRRB,,JCRB1148,KMBC2_URINARY_TRACT,,,,,,MF-002-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000863,PT-LeOcTX,DBTRG-05MG,DBTRG05MG,59.0,Commercial,SIDM00867,CVCL_1169,GB,Adult,Adherent,,Primary,central_nervous_system,Female,ATCC,glioblastoma,CRL-2020,DBTRG05MG_CENTRAL_NERVOUS_SYSTEM,906835.0,,1784.0,,,MF-001-049,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000864,PT-8fO9EH,COLO 684,COLO684,63.0,Commercial,SIDM00142,CVCL_1132,UCEC,Adult,Suspension,,Primary,endometrium,Female,ECACC,,,COLO684_ENDOMETRIUM,910691.0,,218.0,,,MF-001-003,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000865,PT-zNE9qB,KYSE-450,KYSE450,59.0,Commercial,SIDM01027,CVCL_1353,ESCC,Adult,Adherent,,Primary,oesophagus,Male,DSMZ,,ACC 387,KYSE450_OESOPHAGUS,907320.0,,60.0,,,MF-011-002,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000866,PT-l2795j,NCI-H1048,NCIH1048,53.0,Commercial,SIDM00654,CVCL_1453,SCLC,Adult,Adherent,,Metastatic,pleural_effusion,Female,ATCC,,CRL-5853,NCIH1048_LUNG,687995.0,,1875.0,,,MF-007-010,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000867,PT-3nyeTa,ChaGo-K-1,CHAGOK1,45.0,Commercial,SIDM00924,CVCL_1121,NSCLC,Adult,Adherent,,Metastatic,lung,Male,ECACC,,96020948,CHAGOK1_LUNG,687596.0,,1605.0,,,MF-001-001,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-000868,PT-Js0sCN,HCC-1195,HCC1195,47.0,Commercial,,CVCL_5127,LUAS,Adult,Adherent,,Primary,lung,Male,KCLB,NSCLC_adenosquamous,71195,HCC1195_LUNG,,,,,,MF-001-005,None,LUAS,Lung Adenosquamous Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000869,PT-JylhbS,NCI-H1568,NCIH1568,48.0,Commercial,SIDM00750,CVCL_1476,LUAD,Adult,Adherent,,Metastatic,lymph_node,Female,ATCC,NSCLC_adenocarcinoma,CRL-5876,NCIH1568_LUNG,1298348.0,,711.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000870,PT-J3fuZ3,NCI-H1930,NCIH1930,41.0,Commercial,,CVCL_1507,SCLC,Adult,Mixed,,Metastatic,lymph_node,Male,ATCC,,CRL-5906,NCIH1930_LUNG,,,,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000871,PT-IG35r8,NCI-H510,NCIH510,56.0,Commercial,SIDM00927,CVCL_1565,SCLC,Adult,Mixed,,Metastatic,autonomic_ganglia,Male,ATCC,,,NCIH510_LUNG,753605.0,,919.0,,,MF-007-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000872,PT-CXILSG,HCC515,HCC515,39.0,Academic lab,,CVCL_5136,LUAD,Adult,Adherent,,Primary,lung,Female,Meyerson (Broad) who received from Minna,NSCLC_adenocarcinoma,,HCC515_LUNG,,,,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000873,PT-8iaWjG,KYSE-270,KYSE270,79.0,Commercial,SIDM01029,CVCL_1350,ESCC,Adult,Adherent,,Primary,oesophagus,Male,DSMZ,,ACC 380,KYSE270_OESOPHAGUS,907319.0,,1518.0,,,MF-011-002,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000874,PT-eEEvwF,RS4;11,RS411,32.0,Commercial,SIDM01086,CVCL_0093,BLL,Adult,Suspension,,Primary,bone_marrow,Female,ATCC,b_cell,,RS411_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909703.0,,862.0,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000875,PT-SrAh0r,NCI-H2347,NCIH2347,54.0,Commercial,SIDM00726,CVCL_1550,LUAD,Adult,Mixed,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,CRL-5942,NCIH2347_LUNG,687820.0,,337.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000876,PT-FjJcwU,MDA-MB-415,MDAMB415,38.0,Commercial,SIDM00630,CVCL_0621,BRCA,Adult,Adherent,HER2_amp,Metastatic,pleural_effusion,Female,ATCC,ERpos_HER2neg,,MDAMB415_BREAST,924240.0,,344.0,,,MF-024-008,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000877,PT-Lz3i3Q,EB1,EB1,9.0,Commercial,SIDM00862,CVCL_2027,BL,Pediatric,Suspension,,Primary,bone,Female,ATCC,b_cell_burkitt,HTB-60,EB1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000878,PT-WMdXaj,HCC-15,HCC15,47.0,Commercial,SIDM01072,CVCL_2057,LUSC,Adult,Adherent,,Primary,lung,Male,DSMZ,NSCLC_squamous,ACC 496,HCC15_LUNG,1240143.0,,1368.0,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000879,PT-wMzIqz,MFE-296,MFE296,68.0,Commercial,SIDM00334,CVCL_1406,UCEC,Adult,Adherent,,Primary,endometrium,Female,DSMZ,,ACC 419,MFE296_ENDOMETRIUM,908130.0,,920.0,,,MF-006-008,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000880,PT-VHRCrj,AGS,AGS,54.0,Commercial,SIDM00850,CVCL_0139,STAD,Adult,Adherent,,Primary,stomach,Female,ATCC,,CRL-1739,AGS_STOMACH,906790.0,,1011.0,,,MF-004-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000881,PT-9PTPLm,MEL-JUSO,MELJUSO,58.0,Commercial,SIDM00336,CVCL_1403,SKCM,Adult,Adherent,,Primary,skin,Female,DSMZ,,ACC 74,MELJUSO_SKIN,908125.0,,626.0,,,MF-001-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000882,PT-MRf5jM,IGR-1,IGR1,42.0,Commercial,SIDM01060,CVCL_1303,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,DSMZ,,ACC 236,IGR1_SKIN,907169.0,,1534.0,,,MF-002-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000883,PT-u7Vp6O,SW 1783,SW1783,68.0,Commercial,SIDM01164,CVCL_1722,AASTR,Adult,Adherent,,Primary,central_nervous_system,Male,ATCC,astrocytoma,HTB-13,SW1783_CENTRAL_NERVOUS_SYSTEM,909750.0,,1453.0,,,MF-001-001,None,AASTR,Anaplastic Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-000884,PT-3NwoWt,MDA-MB-435S,MDAMB435S,31.0,Commercial,SIDM01222,CVCL_0622,MEL,Adult,Adherent,,Metastatic,skin,Unknown,ATCC,amelanotic,HTB-129,MDAMB435S_SKIN,,SNP fingerprinting confirms that this line is an M14 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000885,PT-6zI98h,TOV-21G,TOV21G,62.0,Commercial,SIDM01169,CVCL_3613,CCOV,Adult,Adherent,,Primary,ovary,Female,ATCC,clear_cell,CRL-11730,TOV21G_OVARY,1240222.0,,700.0,,,,None,CCOV,Clear Cell Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000886,PT-bwPYLi,NCI-H2009,NCIH2009,68.0,Commercial,SIDM00756,CVCL_1514,LUAD,Adult,Adherent,,Metastatic,lymph_node,Female,ATCC,NSCLC_adenocarcinoma,CRL-5911,NCIH2009_LUNG,724873.0,,79.0,,,MF-007-010,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000887,PT-Wth0p2,SF-172,SF172,36.0,Academic lab,,CVCL_V613,GB,Adult,Adherent,,Primary,central_nervous_system,Female,Linda Chin,glioblastoma,,SF172_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-000888,PT-JWHrxe,NCI-H1793,NCIH1793,52.0,Commercial,SIDM00755,CVCL_1496,LUAD,Adult,Adherent,,Primary,lung,Female,ATCC,NSCLC_adenocarcinoma,CRL-5896,NCIH1793_LUNG,908463.0,,934.0,,,MF-007-010,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000889,PT-xlEnkN,KMM-1,KMM1,62.0,Commercial,,CVCL_2981,PCM,Adult,Mixed,,Primary,haematopoietic_and_lymphoid_tissue,Male,HSRRB,,,KMM1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000890,PT-Np75OL,SW 1271,SW1271,69.0,Commercial,SIDM01156,CVCL_1716,SCLC,Adult,Adherent,,Primary,lung,Male,ATCC,,CRL-2177,SW1271_LUNG,1299062.0,,2037.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000891,PT-T3jta4,HCC-1438,HCC1438,43.0,Commercial,,CVCL_L088,LCLC,Adult,Adherent,,Primary,lung,Male,KCLB,NSCLC_large_cell,71438,HCC1438_LUNG,,,,,,MF-001-005,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000892,PT-msHTlh,NCI-H1563,NCIH1563,,Commercial,SIDM00751,CVCL_1475,LUAD,Unknown,Adherent,,Primary,lung,Male,ATCC,NSCLC_adenocarcinoma,CRL-5875,NCIH1563_LUNG,753600.0,,1402.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000893,PT-yo5QST,NCI-H1651,NCIH1651,71.0,Commercial,SIDM00744,CVCL_1484,LUAD,Adult,Adherent,,Primary,lung,Male,ATCC,NSCLC_adenocarcinoma,CRL-5884,NCIH1651_LUNG,910900.0,,1828.0,,,MF-007-020,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000894,PT-RPtiPJ,NCI-H1869,NCIH1869,58.0,Commercial,SIDM00768,CVCL_1500,LUSC,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_squamous,CRL-5900,NCIH1869_LUNG,1240183.0,,90.0,,,MF-007-020,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000895,PT-LoHukX,CL-34,CL34,,Commercial,SIDM00945,CVCL_1980,COAD,Unknown,Adherent,MSI,Primary,Colon,Female,DSMZ,,ACC 520,CL34_LARGE_INTESTINE,1290771.0,,1005.0,,,MF-007-019,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000896,PT-bDT6oy,647-V,647V,59.0,Commercial,SIDM00983,CVCL_1049,BLCA,Adult,Adherent,,Primary,urinary_tract,Male,DSMZ,,414,647V_URINARY_TRACT,906797.0,,2061.0,,,MF-002-015,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000897,PT-ZSsyUS,FTC-238,FTC238,42.0,Commercial,SIDM00228,CVCL_2447,THFO,Adult,Adherent,,Metastatic,lung,Male,ECACC,follicular,94060902,FTC238_THYROID,,,,,,MF-007-024,None,THFO,Follicular Thyroid Cancer,Well-Differentiated Thyroid Cancer,Thyroid +ACH-000898,PT-lvKDUW,SNU-719,SNU719,53.0,Commercial,,CVCL_5086,TSTAD,Adult,Mixed,,Primary,stomach,Male,KCLB,tubular,719,SNU719_STOMACH,,,,,,MF-001-003,None,TSTAD,Tubular Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000899,PT-j60QIc,WM-88,WM88,,Academic lab,SIDM01768,CVCL_6805,MEL,Unknown,Unknown,,Metastatic,skin,Male,Received from CCLE; originally academic lab,,,WM88_SKIN,,,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000900,PT-rWMXJp,NCI-H23,NCIH23,51.0,Commercial,SIDM00138,CVCL_1547,LUAD,Adult,Adherent,,Primary,lung,Male,ATCC,NSCLC_adenocarcinoma,CRL-5800,NCIH23_LUNG,905942.0,,2108.0,,,MF-001-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000901,PT-gBcBSy,HCC-1359,HCC1359,55.0,Commercial,,CVCL_5128,GCLC,Adult,Adherent,,Primary,lung,Female,KCLB,NSCLC_large_cell,71359,HCC1359_LUNG,,,,,,MF-001-001,None,GCLC,Giant Cell Carcinoma of the Lung,Non-Small Cell Lung Cancer,Lung +ACH-000902,PT-vbLgiZ,CAL-148,CAL148,58.0,Commercial,SIDM00938,CVCL_1106,IDC,Adult,Mixed,luminal_HER2_amp,Metastatic,pleural_effusion,Female,DSMZ,ERneg_HER2neg,ACC 460,CAL148_BREAST,924106.0,,1610.0,,,MF-002-003,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000903,PT-ZSsyUS,FTC-133,FTC133,42.0,Commercial,SIDM00213,CVCL_1219,THFO,Adult,Adherent,,Metastatic,thyroid,Male,ECACC,anaplastic,94060901,FTC133_THYROID,906864.0,,1007.0,,,MF-007-002,None,THFO,Follicular Thyroid Cancer,Well-Differentiated Thyroid Cancer,Thyroid +ACH-000904,PT-lWWpjR,NCI-H2106,NCIH2106,58.0,Commercial,,CVCL_1526,LCLC,Adult,Suspension,,Metastatic,lymph_node,Male,ATCC,NSCLC_large_cell,,NCIH2106_LUNG,,,,,,MF-007-010,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000905,PT-nC0LDL,5637,5637,68.0,Commercial,SIDM00807,CVCL_0126,BLCA,Adult,Mixed,,Primary,urinary_tract,Male,ATCC,,HTB-9,5637_URINARY_TRACT,687452.0,,1157.0,,Unknown,MF-001-001,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-000906,PT-rH0cpo,ES-2,ES2,47.0,Commercial,SIDM00861,CVCL_3509,CCOV,Adult,Adherent,,Primary,ovary,Female,ATCC,clear_cell,CRL-1978,ES2_OVARY,1240128.0,,869.0,,,MF-001-001,None,CCOV,Clear Cell Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000907,PT-20TYLm,SNU-349,SNU349,68.0,Commercial,,CVCL_5054,CCRCC,Adult,Adherent,,Primary,kidney,Male,KCLB,clear_cell,,SNU349_KIDNEY,,,,,,MF-001-001,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-000908,PT-HKGwye,SNU-520,SNU520,60.0,Commercial,,CVCL_5072,STAD,Adult,Adherent,,Primary,stomach,Female,KCLB,,,SNU520_STOMACH,,,,,,MF-001-005,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000909,PT-4c7WBs,JHUEM-2,JHUEM2,62.0,Commercial,,CVCL_4656,UCEC,Adult,Mixed,,Primary,endometrium,Female,RIKEN,,RCB1551,JHUEM2_ENDOMETRIUM,,,,,,MF-007-001,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000910,PT-TFQ2Kc,MDA-MB-453,MDAMB453,48.0,Commercial,SIDM00272,CVCL_0418,BRCA,Adult,Adherent,HER2_amp,Metastatic,pericardial_effusion,Female,ATCC,ERneg_HER2neg,HTB-131,MDAMB453_BREAST,908122.0,,101.0,,,MF-021-001,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000911,PT-BTCHFg,NUGC-3,NUGC3,72.0,Commercial,SIDM00572,CVCL_1612,STAD,Adult,Adherent,,Metastatic,soft_tissue,Male,JHSF (JCRB),,Cannot find JHSF website,NUGC3_STOMACH,908455.0,,1251.0,,,MF-001-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000912,PT-wNpw5y,NCI-H2286,NCIH2286,57.0,Commercial,SIDM00017,CVCL_1545,SCLC,Adult,Adherent,,Primary,lung,Female,ATCC,,CRL-5938,NCIH2286_LUNG,,,,,,MF-001-014,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-000913,PT-6MnPg3,ESS-1,ESS1,76.0,Commercial,SIDM01043,CVCL_1205,ESS,Adult,Adherent,,Primary,endometrium,Female,DSMZ,,ACC 461,ESS1_ENDOMETRIUM,907000.0,,293.0,,,MF-001-020,None,ESS,Endometrial Stromal Sarcoma,Uterine Sarcoma/Mesenchymal,Uterus +ACH-000914,PT-zrYGap,HT,HT,70.0,Commercial,SIDM00661,CVCL_1290,DLBCLNOS,Adult,Suspension,,Metastatic,ascites,Male,ATCC,b_cell,CRL-2260,HT_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907063.0,,745.0,,Unknown,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-000915,PT-Jc7cdo,IPC-298,IPC298,64.0,Commercial,SIDM01059,CVCL_1307,SKCM,Adult,Adherent,,Primary,skin,Female,DSMZ,,ACC 251,IPC298_SKIN,907171.0,,77.0,,,MF-001-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000916,PT-tMdDt6,NCI-H1573,NCIH1573,35.0,Commercial,SIDM00749,CVCL_1478,LUAD,Adult,Adherent,,Metastatic,soft_tissue,Female,ATCC,NSCLC_adenocarcinoma,CRL-5879,NCIH1573_LUNG,908472.0,,372.0,,,MF-001-014,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000917,PT-2HckVI,TE-4,TE4,48.0,Commercial,SIDM00250,CVCL_3337,ESCC,Adult,Adherent,,,lymph_node,Male,RIKEN,,RCB2097,TE4_OESOPHAGUS,1503371.0,Cell line thought to be female but has Y chromosome expression.,382.0,,,MF-001-001,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-000918,PT-vmdivL,MOLT-16,MOLT16,5.0,Commercial,SIDM00431,CVCL_1424,TLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,t_cell,29,MOLT16_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908147.0,,1321.0,,,MF-001-020,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000919,PT-Iu2j9I,IM95,IM95,63.0,Commercial,SIDM00602,CVCL_2961,STAD,Adult,Mixed,,Primary,stomach,Male,HSRRB,,JCRB1075.0,IM95_STOMACH,1240155.0,,405.0,,,MF-002-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000920,PT-9UeFHL,CML-T1,CMLT1,36.0,Commercial,SIDM00958,CVCL_1126,CML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,blast_crisis,7,CMLT1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910951.0,,160.0,,,MF-001-001,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-000921,PT-jKAU6d,NCI-H157-DM,NCIH157DM,59.0,Commercial,,CVCL_0463,LUSC,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,NSCLC_squamous,,NCIH157DM_LUNG,,Previously thought to be NCI-H1339 but ICLAC determined that ATCC stock used by DepMap is actually NCI-H157 or a derivative,,,,MF-001-020,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000922,PT-0mdkef,RCH-ACV,RCHACV,8.0,Commercial,SIDM00449,CVCL_1851,BLL,Pediatric,Suspension,,,bone_marrow,Female,DSMZ,b_cell,ACC 548,RCHACV_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330994.0,,1160.0,,,MF-001-020,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000923,PT-6XYxNF,BCP-1,BCP1,94.0,Commercial,,CVCL_0107,PEL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,ATCC,b_cell,CRL-2294,BCP1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,PEL,Primary Effusion Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000924,PT-4qxYZb,NCI-H2172,NCIH2172,,Commercial,SIDM00926,CVCL_1537,NSCLC,Unknown,Adherent,,Primary,lung,Female,ATCC,,CRL-5930,NCIH2172_LUNG,1298353.0,,1692.0,,,MF-001-001,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-000925,PT-xZ4Yje,DV-90,DV90,50.0,Commercial,,CVCL_1184,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Male,DSMZ,NSCLC_adenocarcinoma,ACC 307,DV90_LUNG,,,,,,MF-001-054,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000926,PT-vAncSZ,HT-55,HT55,,Commercial,SIDM00541,CVCL_1294,COAD,Unknown,Adherent,,Primary,large_intestine,Unknown,ECACC,,85061105,HT55_LARGE_INTESTINE,907287.0,,1688.0,,,MF-015-002,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000927,PT-Az6j9u,BT-474,BT474,60.0,Commercial,SIDM00963,CVCL_0179,IDC,Adult,Adherent,HER2_amp,Primary,breast,Female,ATCC,ERpos_HER2pos,HTB-20,BT474_BREAST,946359.0,,412.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000928,PT-C2kgmR,JHUEM-1,JHUEM1,56.0,Commercial,,CVCL_4655,UCEC,Adult,Adherent,,Primary,endometrium,Female,RIKEN,,RCB1548,JHUEM1_ENDOMETRIUM,,,,,,MF-007-021,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000929,PT-29i6JV,NCI-H2110,NCIH2110,,Commercial,SIDM00703,CVCL_1530,NSCLC,Unknown,Adherent,,Metastatic,pleural_effusion,Unknown,ATCC,,CRL-5924,NCIH2110_LUNG,1298351.0,,1948.0,,,MF-001-001,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-000930,PT-AHaEgg,HCC1569,HCC1569,70.0,Commercial,SIDM00878,CVCL_1255,IDC,Adult,Adherent,basal_A,Primary,breast,Female,ATCC,ERneg_HER2pos,CRL-2330,HCC1569_BREAST,907046.0,,2127.0,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000931,PT-rXLMnY,HMCB,HMCB,57.0,Commercial,SIDM00914,CVCL_3317,MEL,Adult,Adherent,,Primary,skin,Female,ATCC,,CRL-9607,HMCB_SKIN,,,,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-000932,PT-3F7Xgi,SNU-1,SNU1,44.0,Commercial,SIDM01146,CVCL_0099,STAD,Adult,Suspension,,Metastatic,stomach,Male,ATCC,,CRL-5971,SNU1_STOMACH,908444.0,,564.0,,,MF-001-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000933,PT-f20OQ6,SNU-324,SNU324,50.0,Commercial,,CVCL_5051,PAAD,Adult,Mixed,,Primary,pancreas,Male,KCLB,exocrine_adenocarcinoma,,SNU324_PANCREAS,,,,,,MF-001-005,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-000934,PT-0VWXIm,MDA-MB-361,MDAMB361,40.0,Commercial,SIDM00528,CVCL_0620,BRCA,Adult,Adherent,HER2_amp,Metastatic,central_nervous_system,Female,ATCC,ERpos_HER2pos,HTB-27,MDAMB361_BREAST,908121.0,,880.0,,,MF-021-003,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-000935,PT-snQqpb,MDST8,MDST8,,Commercial,SIDM00527,CVCL_2588,COAD,Unknown,Adherent,,Primary,large_intestine,Unknown,ECACC,,99011801,MDST8_LARGE_INTESTINE,1240173.0,,928.0,,,MF-002-003,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000936,PT-AiIzwN,EFO-27,EFO27,36.0,Commercial,SIDM01051,CVCL_1192,MOV,Adult,Adherent,,Metastatic,abdomen,Female,DSMZ,endometrioid,ACC 191,EFO27_OVARY,906852.0,,1497.0,,,MF-001-047,None,MOV,Mucinous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000937,PT-UEq5KV,PF-382,PF382,6.0,Commercial,SIDM00451,CVCL_1641,TLL,Pediatric,Suspension,,,pleural_effusion,Female,"DSMZ, Received from Kim Stegmaier (DFCI)",t_cell,38,PF382_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909260.0,,1043.0,,,MF-001-001,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000938,PT-rgsUoa,NALM-6,NALM6,19.0,Commercial,SIDM00429,CVCL_0092,BLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,ACC 128,NALM6_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908158.0,,973.0,,,MF-001-017,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000939,PT-b2KmUs,SK-UT-1,SKUT1,75.0,Commercial,SIDM01113,CVCL_0533,ULMS,Adult,Adherent,,Primary,endometrium,Female,ATCC,,HTB-114,SKUT1_SOFT_TISSUE,909732.0,,725.0,,,MF-006-001,None,ULMS,Uterine Leiomyosarcoma,Uterine Sarcoma/Mesenchymal,Uterus +ACH-000940,PT-P1Vdpe,AN3 CA,AN3CA,55.0,Commercial,SIDM00901,CVCL_0028,UCEC,Adult,Adherent,,Metastatic,endometrium,Female,ATCC,,HTB-111,AN3CA_ENDOMETRIUM,910781.0,,1294.0,,,MF-006-001,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000941,PT-YZF57N,HEC-1-B,HEC1B,71.0,Commercial,SIDM01241,CVCL_0294,UCEC,Adult,Adherent,,Primary,endometrium,Female,ATCC,,HTB-113,HEC1B_ENDOMETRIUM,,,,,,MF-006-001,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000942,PT-Ojbh46,HPB-ALL,HPBALL,14.0,Commercial,,CVCL_1820,TLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,t_cell,483,HPBALL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,SNP fingerprinting rules out JURKAT contamination.,,,,MF-001-001,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000943,PT-9E5O4L,RKO,RKO,,Commercial,SIDM01090,CVCL_0504,COAD,Unknown,Adherent,MSI,Primary,Colon,Unknown,ATCC,,CRL-2577,RKO_LARGE_INTESTINE,909698.0,,607.0,,,MF-015-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000944,PT-grWxm0,NAMALWA,NAMALWA,3.0,Commercial,SIDM00641,CVCL_0067,BL,Pediatric,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,JCRB,b_cell_burkitt,IFO50040,NAMALWA_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908159.0,,669.0,,,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000945,PT-0uFhp8,NCI-H650,NCIH650,,Commercial,SIDM01124,CVCL_1575,LUAD,Unknown,Suspension,,Metastatic,lung,Male,ATCC,NSCLC_adenocarcinoma,CRL-5835,NCIH650_LUNG,722066.0,,1539.0,,,MF-001-014,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000946,PT-ANEQ4x,HEC-265,HEC265,59.0,Commercial,,CVCL_2928,UCEC,Adult,Adherent,,Primary,endometrium,Female,HSRRB,,JCRB1142,HEC265_ENDOMETRIUM,,,,,,MF-015-007,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000947,PT-MsM9mi,OVK18,OVK18,49.0,Commercial,SIDM00238,CVCL_3770,EOV,Adult,Adherent,,Metastatic,ascites,Female,RIKEN,endometrioid,RCB1903,OVK18_OVARY,1480371.0,,200.0,,,MF-006-001,None,EOV,Endometrioid Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000948,PT-VDIRwk,23132/87,2313287,72.0,Commercial,SIDM00980,CVCL_1046,STAD,Adult,Adherent,,Primary,stomach,Male,DSMZ,,ACC 201,2313287_STOMACH,910924.0,,558.0,,,MF-001-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000949,PT-cGBc5A,TGBC11TKB,TGBC11TKB,72.0,Commercial,SIDM00251,CVCL_1768,STAD,Adult,Suspension,,Metastatic,lymph_node,Female,RIKEN,,RCB1148,TGBC11TKB_STOMACH,909770.0,,1917.0,,,MF-002-008,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-000950,PT-6USEGU,LoVo,LOVO,56.0,Commercial,SIDM00839,CVCL_0399,COAD,Adult,Adherent,MSI,Metastatic,lymph_node,Male,ATCC,,CCL-229,LOVO_LARGE_INTESTINE,907790.0,,306.0,,,MF-004-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000951,PT-Q9lcwL,NCI-H2342,NCIH2342,55.0,Commercial,SIDM00727,CVCL_1549,LUAD,Adult,Mixed,,Primary,lung,Male,ATCC,NSCLC_adenocarcinoma,CRL-5941,NCIH2342_LUNG,687819.0,,1814.0,,,MF-007-010,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000952,PT-4e8Oiw,MDA PCa 2b,MDAPCA2B,63.0,Commercial,,CVCL_4748,PRAD,Adult,Adherent,,Metastatic,bone,Male,ATCC,,CRL-2422,MDAPCA2B_PROSTATE,,,,,,MF-004-007,None,PRAD,Prostate Adenocarcinoma,Prostate Adenocarcinoma,Prostate +ACH-000953,PT-Zkuf8L,SUP-T1,SUPT1,8.0,Commercial,SIDM01154,CVCL_1714,TLL,Pediatric,Suspension,,Metastatic,pleural_effusion,Male,ATCC,t_cell,CRL-1942,SUPT1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909743.0,,1452.0,,,MF-001-001,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000954,PT-YZF57N,HEC-1-A,HEC1A,71.0,Commercial,SIDM00595,CVCL_0293,UCEC,Adult,Adherent,,Primary,endometrium,Female,ATCC,,HTB-112,HEC1A_ENDOMETRIUM,,,,,,MF-023-001,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000955,PT-lgLAoF,SNU-407,SNU407,37.0,Commercial,SIDM00214,CVCL_5058,COAD,Adult,Adherent,MSI,Metastatic,soft_tissue,Male,KCLB,,407,SNU407_LARGE_INTESTINE,1660034.0,,1907.0,,,MF-001-003,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000956,PT-rqTCjv,22Rv1,22RV1,,Commercial,SIDM00499,CVCL_1045,PRAD,Adult,Adherent,,Primary,prostate,Male,ATCC,,CRL-2505,22RV1_PROSTATE,924100.0,,1027.0,,,MF-001-001,None,PRAD,Prostate Adenocarcinoma,Prostate Adenocarcinoma,Prostate +ACH-000957,PT-FXUrcz,LS 180,LS180,58.0,Commercial,SIDM00680,CVCL_0397,COAD,Adult,Adherent,MSI,Primary,Colon,Female,ATCC,,CL-187,LS180_LARGE_INTESTINE,998189.0,,2081.0,,,MF-006-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000958,PT-EB6qeM,SW48,SW48,83.0,Commercial,SIDM00837,CVCL_1724,COAD,Adult,Mixed,MSI,Primary,Colon,Female,ATCC,,CCL-231,SW48_LARGE_INTESTINE,909751.0,,1.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000959,PT-ulmNPq,SNU-C4,SNUC4,35.0,Commercial,SIDM00500,CVCL_5111,COAD,Adult,Suspension,MSI,Primary,large_intestine,Male,KCLB,,0000C4,SNUC4_LARGE_INTESTINE,,,,,,MF-001-005,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000960,PT-N5YXV2,Reh,REH,15.0,Commercial,SIDM00447,CVCL_1650,BLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,ATCC,b_cell,,REH_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909696.0,,1272.0,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000961,PT-P06fLR,Ishikawa (Heraklio) 02 ER-,ISHIKAWAHERAKLIO02ER,39.0,Commercial,SIDM00037,CVCL_6543,UCEC,Adult,Unknown,,Primary,endometrium,Female,ECACC,,99040201,ISHIKAWAHERAKLIO02ER_ENDOMETRIUM,,,,,,MF-006-001,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000962,PT-3doOpy,OC 314,OC314,39.0,,SIDM00220,CVCL_1616,SOC,Adult,Adherent,,Metastatic,ascites,Female,ICLC,clear_cell,,OC314_OVARY,909257.0,,896.0,,,,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000963,PT-c4ZGOD,CCK-81,CCK81,62.0,Commercial,SIDM00487,CVCL_2873,COAD,Adult,Adherent,MSI,Metastatic,large_intestine,Female,HSRRB,,,CCK81_LARGE_INTESTINE,1240123.0,,1915.0,,,MF-006-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000964,PT-1559gB,MOLT-3,MOLT3,19.0,Commercial,SIDM00153,CVCL_0624,ATLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,NIBRI (Novartis),t_cell,CRL-1552,MOLT3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,ATLL,Adult T-Cell Leukemia/Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-000965,PT-de7J0H,RL95-2,RL952,65.0,Commercial,SIDM01088,CVCL_0505,UASC,Adult,Adherent,,Primary,endometrium,Female,ATCC,,CRL-1671,RL952_ENDOMETRIUM,930082.0,,2215.0,,,MF-007-010,None,UASC,Uterine Adenosquamous Carcinoma,Endometrial Carcinoma,Uterus +ACH-000966,PT-bGFaJu,IGROV1,IGROV1,47.0,Academic lab,SIDM00151,CVCL_1304,EOV,Adult,Adherent,,Primary,ovary,Female,NCI/DCTD,mixed_endometrioid_clear_cell,,IGROV1_OVARY,905968.0,,1215.0,,,MF-001-001,None,EOV,Endometrioid Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-000967,PT-GfrL06,SNU-C2A,SNUC2A,43.0,Commercial,SIDM00780,CVCL_1709,COAD,Adult,Adherent,MSI,Primary,large_intestine,Female,ATCC,,CCL-250.1,SNUC2A_LARGE_INTESTINE,,,,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000968,PT-z7yLU0,COLO 792,COLO792,62.0,Commercial,SIDM00140,CVCL_1134,MEL,Adult,Adherent,,Metastatic,central_nervous_system,Male,ECACC,,93052616,COLO792_SKIN,906814.0,,1467.0,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-000969,PT-ue72rD,KM12,KM12,,Commercial,SIDM00150,CVCL_1331,COAD,Unknown,Mixed,MSI,Primary,large_intestine,Unknown,JCRB,,,KM12_LARGE_INTESTINE,905989.0,,1990.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000970,PT-B2n6IN,SNU-C5,SNUC5,77.0,Commercial,SIDM00498,CVCL_5112,COAD,Adult,Adherent,,Primary,Colon,Female,KCLB,,,SNUC5_LARGE_INTESTINE,1674021.0,,152.0,,,MF-001-005,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000971,PT-2Roqq2,HCT 116,HCT116,48.0,Commercial,SIDM00783,CVCL_0291,COAD,Adult,Adherent,MSI,Primary,large_intestine,Male,ATCC,,CCL-247,HCT116_LARGE_INTESTINE,905936.0,,1920.0,,,MF-023-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000972,PT-KBFu4S,HEC-151,HEC151,,Commercial,,CVCL_2925,UCEC,Unknown,Adherent,,Primary,endometrium,Female,HSRRB,,JCRB1122,HEC151_ENDOMETRIUM,,,,,,MF-015-007,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000973,PT-P31KFG,639-V,639V,69.0,Commercial,SIDM00999,CVCL_1048,UCU,Adult,Adherent,,Primary,urinary_tract,Male,ATCC,bladder_transitional_cell,,639V_URINARY_TRACT,906798.0,,1483.0,,,MF-002-001,None,UCU,Urethral Urothelial Carcinoma,Urethral Cancer,Bladder/Urinary Tract +ACH-000974,PT-cgXnS7,SNG-M,SNGM,52.0,Commercial,SIDM00373,CVCL_1707,UCEC,Adult,Adherent,,Metastatic,lymph_node,Female,HSRRB,,JCRB0179,SNGM_ENDOMETRIUM,909735.0,,2058.0,,,MF-004-007,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000975,PT-gNoIDb,HCC2450,HCC2450,52.0,Academic lab,,CVCL_5133,LUSC,Adult,Adherent,,Primary,lung,Male,Meyerson (Broad) who received from Minna,NSCLC_squamous,,HCC2450_LUNG,,,,,,MF-001-001,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000976,PT-z66Tka,HuCCT1,HUCCT1,56.0,Commercial,SIDM00587,CVCL_0324,IHCH,Adult,Adherent,,Metastatic,ascites,Male,HSRRB,intrahepatic,JCRB0425,HUCCT1_BILIARY_TRACT,907069.0,,1213.0,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-000977,PT-tY34fU,LNCaP clone FGC,LNCAPCLONEFGC,50.0,Commercial,SIDM00683,CVCL_1379,PRAD,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,,CRL-1740,LNCAPCLONEFGC_PROSTATE,907788.0,,2080.0,,,MF-001-001,None,PRAD,Prostate Adenocarcinoma,Prostate Adenocarcinoma,Prostate +ACH-000978,PT-bmKWJL,EN,EN,50.0,Commercial,SIDM01045,CVCL_2034,UCEC,Adult,Adherent,,Primary,endometrium,Female,DSMZ,,ACC 564,EN_ENDOMETRIUM,1240127.0,,1919.0,,,MF-001-001,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000979,PT-05dldv,DU 145,DU145,69.0,Commercial,SIDM00120,CVCL_0105,PRAD,Adult,Adherent,,Metastatic,central_nervous_system,Male,ATCC,,HTB-81,DU145_PROSTATE,905935.0,,872.0,,,MF-006-001,None,PRAD,Prostate Adenocarcinoma,Prostate Adenocarcinoma,Prostate +ACH-000980,PT-DdDGB6,NCI-H1155,NCIH1155,36.0,Commercial,SIDM00651,CVCL_1456,LCLC,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,NSCLC_large_cell,CRL-5818,NCIH1155_LUNG,908467.0,,801.0,,,MF-001-014,None,LCLC,Large Cell Lung Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-000981,PT-zhUnhJ,DND-41,DND41,13.0,Commercial,SIDM00946,CVCL_2022,TLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,,525,DND41_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1297446.0,,1035.0,,,MF-001-020,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000982,PT-sGJOXH,GP2d,GP2D,71.0,Commercial,SIDM00536,CVCL_2450,COAD,Adult,Adherent,MSI,Primary,Colon,Female,ECACC,,95090714-1VL,GP2D_LARGE_INTESTINE,,,,,,MF-015-003,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000983,PT-AcI1bM,KCL-22,KCL22,32.0,Commercial,SIDM01004,CVCL_2091,CML,Adult,Suspension,,,pleural_effusion,Female,DSMZ,blast_crisis,ACC 519,KCL22_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330931.0,,1513.0,,,MF-001-001,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-000984,PT-UZ2uk5,HEC-6,HEC6,48.0,Commercial,,CVCL_2931,UASC,Adult,Adherent,,Primary,endometrium,Female,HSRRB,,JCRB1118,HEC6_ENDOMETRIUM,,,,,,MF-015-007,None,UASC,Uterine Adenosquamous Carcinoma,Endometrial Carcinoma,Uterus +ACH-000985,PT-KI0Di1,LS411N,LS411N,32.0,Commercial,SIDM00660,CVCL_1385,COAD,Adult,Adherent,MSI,Primary,large_intestine,Male,ATCC,,CRL-2159,LS411N_LARGE_INTESTINE,907794.0,,724.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000986,PT-EoHcfh,HT115,HT115,,Commercial,SIDM00534,CVCL_2520,COAD,Unknown,Adherent,,Primary,Colon,Unknown,ECACC,,85061104,HT115_LARGE_INTESTINE,907289.0,,2099.0,,,MF-015-014,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000987,PT-1PBPXD,MeWo,MEWO,78.0,Commercial,SIDM00545,CVCL_0445,SKCM,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,,HTB-65,MEWO_SKIN,908128.0,,102.0,,,MF-001-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-000988,PT-blqauC,MFE-319,MFE319,81.0,Commercial,SIDM00333,CVCL_2112,UASC,Adult,Adherent,,Primary,endometrium,Female,DSMZ,,ACC 423,MFE319_ENDOMETRIUM,1240174.0,,1816.0,,,MF-041-001,None,UASC,Uterine Adenosquamous Carcinoma,Endometrial Carcinoma,Uterus +ACH-000989,PT-iFoJMI,SNU-175,SNU175,56.0,Commercial,SIDM00216,CVCL_5031,MACR,Adult,Mixed,MSI,Metastatic,abdomen,Female,KCLB,mucinous,,SNU175_LARGE_INTESTINE,1659928.0,,154.0,,,MF-001-001,None,MACR,Mucinous Adenocarcinoma of the Colon and Rectum,Colorectal Adenocarcinoma,Bowel +ACH-000990,PT-7DaBfX,HEC-108,HEC108,,Commercial,,CVCL_2923,UCEC,Unknown,Adherent,,Primary,endometrium,Female,HSRRB,,JCRB1123,HEC108_ENDOMETRIUM,,,,,,MF-006-012,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000991,PT-pBOr7s,SNU-81,SNU81,53.0,Commercial,SIDM00193,CVCL_5098,COAD,Adult,Adherent,,Primary,Colon,Male,KCLB,,81,SNU81_LARGE_INTESTINE,1660036.0,,697.0,,,MF-001-005,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000992,PT-Ne0ikA,BICR 18,BICR18,,Commercial,,CVCL_2309,LXSC,Unknown,Adherent,,Metastatic,lymph_node,Male,ECACC,,6051601,BICR18_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-002-001,None,LXSC,Larynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-000993,PT-MEVEw0,JHUEM-7,JHUEM7,58.0,Commercial,,CVCL_4658,UCEC,Adult,Adherent,,Primary,endometrium,Female,RIKEN,,RCB1677,JHUEM7_ENDOMETRIUM,,,,,,MF-007-018,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000994,PT-9r7KW8,HEC-59,HEC59,,Commercial,,CVCL_2930,UCEC,Unknown,Adherent,,Primary,endometrium,Female,HSRRB,,JCRB1120,HEC59_ENDOMETRIUM,,,,,,MF-015-007,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000995,PT-lj83Ht,JURKAT,JURKAT,14.0,Commercial,SIDM01016,CVCL_0065,TLL,Pediatric,Adherent,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,t_cell,282,JURKAT_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,998184.0,,1210.0,,,MF-001-001,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-000996,PT-GnDRP6,HEC-251,HEC251,53.0,Commercial,,CVCL_2927,UCEC,Adult,Adherent,,Primary,endometrium,Female,HSRRB,,JCRB1141,HEC251_ENDOMETRIUM,,,,,,MF-015-007,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-000997,PT-i0VYNQ,HCT-15,HCT15,67.0,Commercial,SIDM00789,CVCL_0292,COAD,Adult,Adherent,MSI,Primary,large_intestine,Male,ATCC,,CCL-225,HCT15_LARGE_INTESTINE,905937.0,,1553.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000998,PT-A55gCd,CW-2,CW2,55.0,Commercial,SIDM00282,CVCL_1151,COAD,Adult,Adherent,MSI,Primary,large_intestine,Female,RIKEN,,RCB0778,CW2_LARGE_INTESTINE,910554.0,,1833.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-000999,PT-hR5WVg,SNU-1040,SNU1040,34.0,Commercial,SIDM00217,CVCL_5003,COAD,Adult,Adherent,MSI,Primary,Colon,Male,KCLB,,,SNU1040_LARGE_INTESTINE,1659823.0,,2191.0,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001000,PT-CnIDAz,1321N1,1321N1,47.0,Commercial,SIDM01967,CVCL_0110,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,ECACC,astrocytoma,86030402,1321N1_CENTRAL_NERVOUS_SYSTEM,,,,,Unknown,,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-001001,PT-epgMPc,143B,143B,13.0,Commercial,SIDM00804,CVCL_2270,OS,Pediatric,Adherent,,Primary,bone,Female,ATCC,,CRL-8303,143B_BONE,,,,,,MF-015-012,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-001002,PT-5WoxMn,451Lu,451LU,22.0,,SIDM01240,CVCL_6357,SKCM,Adult,Adherent,,Metastatic,lymph_node,Male,,,,451LU_SKIN,1287706.0,,577.0,,,,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-001007,PT-IAac7b,A673STAG2KO16,A673STAG2KO16,15.0,Academic lab,,,ES,Pediatric,Adherent,EWS_FLI,Primary,soft_tissue,Female,Kim Stegmaier (Broad),,,A673STAG2KO16_ENGINEERED,,,,True,,MF-002-001,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001008,PT-IAac7b,A673STAG2KO45,A673STAG2KO45,15.0,Academic lab,,,ES,Pediatric,Unknown,EWS_FLI,Primary,soft_tissue,Female,Kim Stegmaier (Broad),,,A673STAG2KO45_ENGINEERED,,,,True,,MF-002-001,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001009,PT-IAac7b,A673STAG2NT14,A673STAG2NT14,15.0,Academic lab,,,ES,Pediatric,Unknown,EWS_FLI,Primary,soft_tissue,Female,Kim Stegmaier (Broad),,,A673STAG2NT14_ENGINEERED,,,,True,,MF-002-001,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001010,PT-IAac7b,A673STAG2NT23,A673STAG2NT23,15.0,Academic lab,,,ES,Pediatric,Unknown,EWS_FLI,Primary,soft_tissue,Female,Kim Stegmaier (Broad),,,A673STAG2NT23_ENGINEERED,,,,True,,MF-002-001,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001015,PT-AXbbCE,AZ521,AZ521,53.0,Commercial,SIDM01934,CVCL_2862,DA,Adult,Adherent,,Primary,small_intestine,Male,Sigma-Aldrich,,,AZ521_SMALL_INTESTINE,,This line is a HuTu 80 derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,,None,DA,Duodenal Adenocarcinoma,Small Bowel Cancer,Bowel +ACH-001016,PT-Pxi6oo,Becker,BECKER,57.0,Commercial,SIDM00490,CVCL_1093,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,HSRRB,,,BECKER_CENTRAL_NERVOUS_SYSTEM,906746.0,,2090.0,,,MF-015-006,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-001017,PT-c34xau,BGC823,BGC823,30.0,,SIDM01938,CVCL_3360,ECAD,Adult,Adherent,blank,Primary,cervix,Female,,,,BGC823_STOMACH,,This line is a HeLa derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,,None,ECAD,Endocervical Adenocarcinoma,Cervical Adenocarcinoma,Cervix +ACH-001018,PT-xU6CEy,BJ hTERT,BJHTERT,0.0,Academic lab,,CVCL_6573,ZFIBNOS,Pediatric,Adherent,,,fibroblast,Male,Jesse Boehm (Broad),,,BJHTERT_FIBROBLAST,,,,,,,None,,"Fibroblast, NOS",Non-Cancerous,Fibroblast +ACH-001020,PT-WLHxY0,BT-16,BT16,2.0,Academic lab,,CVCL_M156,ATRT,Pediatric,Adherent,,,soft_tissue,Male,Roberts (St Jude Hospital),,,BT16_SOFT_TISSUE,,,,,,MF-002-001,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-001021,PT-qL6HtY,C3A,C3A,15.0,Commercial,SIDM01237,CVCL_1098,LIHB,Pediatric,Adherent,,Primary,liver,Male,ATCC,,,C3A_LIVER,910850.0,,1161.0,,,,None,LIHB,Hepatoblastoma,Hepatoblastoma,Liver +ACH-001022,PT-tD8WvT,CBAGPN,CBAGPN,,Academic lab,SIDM01544,CVCL_X981,ES,Unknown,Unknown,,Primary,bone,Female,Kim Stegmaier (Broad),,,CBAGPN_BONE,,,,,,MF-005-005,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001023,PT-llVV5F,CGTH-W-1,CGTHW1,59.0,Commercial,SIDM01248,CVCL_1120,HNSC,Adult,Unknown,,Primary,thyroid,Male,DSMZ,follicular,360,CGTHW1_THYROID,910568.0,SNP fingerprinting confirms that this line is a SW579 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,65.0,,,,None,HNSC,Head and Neck Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001024,PT-rXLMnY,CHL-1,CHL1,36.0,Commercial,SIDM01228,CVCL_1122,MEL,Adult,Adherent,,Metastatic,pleural_effusion,Female,ATCC,,CRL-9446,CHL1_SKIN,910853.0,,739.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-001028,PT-kX7CzT,CHLA-06,CHLA06ATRT,0.0,Academic lab,,CVCL_AQ42,ATRT,Pediatric,Mixed,,,central_nervous_system,Female,Roberts (St Jude Hospital),,,CHLA06ATRT_SOFT_TISSUE,,,,,,MF-005-005,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-001029,PT-NX1XUV,CHLA-10,CHLA10,14.0,Academic lab,,CVCL_6583,ES,Pediatric,Adherent,EWS_FLI,,lymph_node,Female,Children's Oncology Group,,,CHLA10_BONE,,,,,,MF-005-005,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001030,PT-S2RI1y,CHLA-218,CHLA218,,Academic lab,SIDM01538,CVCL_0B48,ES,Unknown,Mixed,,Primary,bone,Female,Children's Oncology Group,,,CHLA218_BONE,,,,,,MF-005-005,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001031,PT-nuzviS,CHLA-266,CHLA266,2.0,Academic lab,,CVCL_M149,ATRT,Pediatric,Adherent,,,soft_tissue,Female,Children's Oncology Group,,,CHLA266_SOFT_TISSUE,,,,,,MF-005-005,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-001032,PT-ZMTtkN,CHLA-32,CHLA32,8.0,Academic lab,,CVCL_M151,ES,Pediatric,Adherent,EWS_FLI,Primary,bone,Female,Children's Oncology Group,,,CHLA32_BONE,,,,,,MF-005-005,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001033,PT-FSTNvW,CHLA-57,CHLA57,,Academic lab,,CVCL_0B49,PNET,Pediatric,Suspension,,Unknown,Unknown,Unknown,Children's Oncology Group,,,CHLA57_BONE,,,,,,MF-005-005,None,PNET,Primitive Neuroectodermal Tumor,Embryonal Tumor,CNS/Brain +ACH-001034,PT-NX1XUV,CHLA-9,CHLA9,14.0,Academic lab,,CVCL_M150,ES,Pediatric,Adherent,EWS_FLI,Primary,bone,Female,Children's Oncology Group,,,CHLA9_BONE,,,,,,MF-005-005,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001035,PT-VYA17t,CHLA-99,CHLA99,,Academic lab,,CVCL_0B50,ES,Pediatric,Suspension,EWS_FLI,Primary,bone,Male,Children's Oncology Group,,,CHLA99_BONE,,,,,,MF-005-005,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001036,PT-XYdNvp,CMK-11-5,CMK115,0.0,Commercial,SIDM01235,CVCL_0217,MLADS,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,HSRRB,,,CMK115_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,MLADS,Myeloid Leukemia Associated with Down Syndrome,Acute Myeloid Leukemia,Myeloid +ACH-001037,PT-XYdNvp,CMK-86,CMK86,0.0,Commercial,,CVCL_2804,MLADS,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,HSRRB from academic lab?,,,CMK86_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,MLADS,Myeloid Leukemia Associated with Down Syndrome,Acute Myeloid Leukemia,Myeloid +ACH-001038,PT-Wd5HrW,COG-E-352,COGE352,17.0,Academic lab,,CVCL_M153,ES,Pediatric,Mixed,EWS_ERG,,haematopoietic_and_lymphoid_tissue,Male,Children's Oncology Group,,,COGE352_BONE,,,,,,MF-005-005,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001039,PT-BLAWlD,COLO 205,COLO205,70.0,Commercial,SIDM00826,CVCL_0218,COAD,Adult,Mixed,,Metastatic,ascites,Male,ATCC,,,COLO205_LARGE_INTESTINE,905961.0,,1687.0,,,,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001041,PT-rXLMnY,CHL-1-DM,CHL1DM,36.0,Commercial,SIDM00911,CVCL_1122,MEL,Adult,Adherent,,Metastatic,pleural_effusion,Female,DSMZ,,,CHL1DM_SKIN,,,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-001042,PT-8fO9EH,COLO-704,COLO704,50.0,Commercial,,CVCL_1994,UCEC,Adult,Suspension,,Metastatic,ascites,Female,DSMZ,,,COLO704_OVARY,,,,,,MF-001-001,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-001043,PT-pWj35D,COLO 775,COLO775,61.0,,SIDM01718,CVCL_1996,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,,,,COLO775_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,SNP fingerprinting confirms that this line is a RPMI-8226 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001044,PT-hf4hbl,COLO 818,COLO818,14.0,Commercial,SIDM01153,CVCL_1998,SKCM,Pediatric,Adherent,,Metastatic,skin,Male,DSMZ,,,COLO818_SKIN,,SNP fingerprinting confirms that this line is a COLO 800 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-001045,PT-w6ABKA,COLO 849,COLO849,43.0,Commercial,,CVCL_2002,SKCM,Adult,Mixed,,Metastatic,lymph_node,Male,DSMZ,,,COLO849_SKIN,,,,,,,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-001047,PT-tvUqrj,COR-L51,CORL51,71.0,,SIDM01717,CVCL_2416,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Male,,,,CORL51_LUNG,,,,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-001048,PT-gZt1Og,COV504,COV504,,Commercial,,CVCL_2424,SOC,Unknown,Adherent,,Metastatic,pleural_effusion,Female,ECACC,high_grade_serous,,COV504_OVARY,,,,,,MF-002-003,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001049,PT-Vc9FSH,CPC-N,CPCN,,Commercial,SIDM00953,CVCL_1146,SCLC,Unknown,Suspension,,Metastatic,pleural_effusion,Male,ATCC,,,CPCN_LUNG,753547.0,,292.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-001050,PT-30CR5P,CW9019,CW9019,,Academic lab,,CVCL_N820,ARMS,Pediatric,Adherent,,,soft_tissue,Male,Matt Meyerson (Broad),alveolar,,CW9019_SOFT_TISSUE,,,,,,MF-002-001,None,ARMS,Alveolar Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-001052,PT-hiWFJs,D384,D384,1.0,Academic lab,,CVCL_1157,MBL,Pediatric,Mixed,MYC_amp,,central_nervous_system,Male,Cho (OHSU),med_group_3,,D384_CENTRAL_NERVOUS_SYSTEM,,,,,,,None,MBL,Medulloblastoma,Embryonal Tumor,CNS/Brain +ACH-001053,PT-HMzBz8,D425,D425,6.0,Academic lab,,CVCL_1275,MBL,Pediatric,Mixed,MYC_amp,Primary,central_nervous_system,Male,Cho (Ohio State University),med_group_3,,D425_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-006,None,MBL,Medulloblastoma,Embryonal Tumor,CNS/Brain +ACH-001054,PT-HMzBz8,D458,D458,6.0,Academic lab,,CVCL_1161,MBL,Pediatric,Mixed,MYC_amp,Primary,central_nervous_system,Male,Cho (Ohio State University),med_group_3,,D458_CENTRAL_NERVOUS_SYSTEM,,,,,,,None,MBL,Medulloblastoma,Embryonal Tumor,CNS/Brain +ACH-001055,PT-OKPPsO,D556,D556,7.0,Academic lab,,CVCL_1165,MBL,Pediatric,Mixed,,,central_nervous_system,Female,Cho (OHSU),,,D556_CENTRAL_NERVOUS_SYSTEM,,,,,,,None,MBL,Medulloblastoma,Embryonal Tumor,CNS/Brain +ACH-001057,PT-AyniWJ,DERL-2,DERL2,30.0,Academic lab,SIDM01509,CVCL_2016,HSTCL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,Weinstock (DFCI),t_cell,,DERL2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-053,None,HSTCL,Hepatosplenic T-cell Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001059,PT-uwRFH0,DL,DL,1.0,Academic lab,SIDM01507,CVCL_U760,ATRT,Pediatric,Unknown,,,soft_tissue,Male,Roberts (St Jude Hospital),,,DL_SOFT_TISSUE,,,,,,MF-001-001,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-001060,PT-T0uF5o,DL-40,DL40,64.0,Academic lab,SIDM01506,CVCL_2889,ALCLALKN,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,,t_cell,,DL40_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,ALCLALKN,Anaplastic Large-Cell Lymphoma ALK Negative,Non-Hodgkin Lymphoma,Lymphoid +ACH-001061,PT-i0VYNQ,DLD-1,DLD1,67.0,Commercial,SIDM00787,CVCL_0248,COAD,Adult,Adherent,,Primary,large_intestine,Male,ATCC,,CCL-221,DLD1_LARGE_INTESTINE,,,,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001063,PT-zAzHh6,DOV13,DOV13,,Academic lab,SIDM00969,CVCL_6774,SOC,Unknown,Unknown,,Primary,ovary,Female,Received from CCLE; originally academic lab,,,DOV13_OVARY,1479987.0,,1897.0,,,,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001064,PT-Lz3i3Q,EB-2,EB2,7.0,Commercial,SIDM00863,CVCL_1186,BL,Pediatric,Suspension,,,lymph_node,Female,ATCC,b_cell_burkitt,HTB-61,EB2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906846.0,,873.0,,Unknown,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001065,PT-gYTQ41,Evsa-T,EVSAT,58.0,,SIDM01042,CVCL_1207,ILC,Adult,Adherent,,Metastatic,ascites,Female,,,,EVSAT_BREAST,906862.0,,1863.0,,,,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001066,PT-9bfdpD,EWS-834,EWS834,,,SIDM01713,CVCL_AW95,ES,Unknown,Unknown,,Primary,bone,Unknown,,,,EWS834_BONE,,,,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001067,PT-0woxaX,F5,F5,,Academic lab,,CVCL_V616,MNG,Unknown,Adherent,,Primary,central_nervous_system,Male,Dunn (BWH),,,F5_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-001-001,None,MNG,Meningioma,Meningothelial Tumor,CNS/Brain +ACH-001068,PT-QyZnxn,FE-PD,FEPD,46.0,Academic lab,SIDM01496,CVCL_H614,ALCLALKN,Adult,Unknown,,,haematopoietic_and_lymphoid_tissue,Female,,t_cell,,FEPD_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,ALCLALKN,Anaplastic Large-Cell Lymphoma ALK Negative,Non-Hodgkin Lymphoma,Lymphoid +ACH-001071,PT-c34xau,GLC-82,GLC82,30.0,Commercial,,CVCL_3371,ECAD,Adult,Adherent,,Primary,cervix,Female,ICLC,NSCLC_adenocarcinoma,,GLC82_LUNG,,This line is a HeLa derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,,None,ECAD,Endocervical Adenocarcinoma,Cervical Adenocarcinoma,Cervix +ACH-001072,PT-tXqEg0,GR-M,GRM,36.0,,SIDM00468,CVCL_2451,PAAD,Adult,Adherent,,Primary,pancreas,Male,,exocrine_adenocarcinoma,,GRM_SKIN,,SNP fingerprinting confirms that this line is a PSN1 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001075,PT-nKyqod,NCI-H292,NCIH292,32.0,Commercial,SIDM00493,CVCL_0455,LUMEC,Adult,Adherent,,Metastatic,lymph_node,Female,ATCC,NSCLC_mucoepidermoid,CRL-1848,NCIH292_LUNG,753604.0,,935.0,,,MF-001-001,None,LUMEC,Mucoepidermoid Carcinoma of the Lung,Non-Small Cell Lung Cancer,Lung +ACH-001079,PT-gjIBeG,HCC1897,HCC1897,47.0,Academic lab,SIDM01814,CVCL_V578,LUSC,Adult,Unknown,,Primary,lung,Male,Matt Meyerson (Broad),NSCLC_squamous,,HCC1897_LUNG,,,,,,,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-001081,PT-JITDXL,HCC2998,HCC2998,,,SIDM00118,CVCL_1266,COAD,Unknown,Unknown,,Primary,large_intestine,Unknown,,,,HCC2998_LARGE_INTESTINE,905971.0,,43.0,,,,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001084,PT-i0VYNQ,HCT-8,HCT8,67.0,,SIDM00786,CVCL_2478,COAD,Adult,Adherent,,,large_intestine,Male,,,,HCT8_LARGE_INTESTINE,,,,,,,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001086,PT-c34xau,HeLa,HELA,30.0,Commercial,SIDM00846,CVCL_0030,ECAD,Adult,Adherent,,Primary,cervix,Female,ATCC,,,HELA_CERVIX,1298134.0,,1799.0,,,MF-006-001,None,ECAD,Endocervical Adenocarcinoma,Cervical Adenocarcinoma,Cervix +ACH-001087,PT-RKrVql,HK-2,HK2,,Academic lab,SIDM01818,CVCL_0302,ZIMMEKC,Adult,Adherent,,,kidney,Male,Bill Kaelin (DFCI),,,HK2_KIDNEY,,,,,,,None,,Immortalized Embyonic Kidney Cells,Non-Cancerous,Kidney +ACH-001088,PT-Qd4EkU,HLC-1,HLC1,,,,CVCL_5529,LUAD,Unknown,Adherent,,Metastatic,pleural_effusion,Unknown,,NSCLC_adenocarcinoma,,HLC1_LUNG,,,,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-001089,PT-saZI6H,HLE,HLE,68.0,Commercial,SIDM00064,CVCL_1281,HCC,Adult,Adherent,,Primary,liver,Male,HSRRB,,,HLE_LIVER,907057.0,,311.0,,,,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-001090,PT-yu1MA4,HN,HN,60.0,Commercial,SIDM01061,CVCL_1283,OCSC,Adult,Adherent,,Metastatic,lymph_node,Male,DSMZ,oral,,HN_UPPER_AERODIGESTIVE_TRACT,907059.0,,1060.0,,,,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001091,PT-i0VYNQ,HRT18,HRT18,67.0,,SIDM00788,CVCL_2514,COAD,Adult,Adherent,MSI,Primary,large_intestine,Male,,,,HRT18_LARGE_INTESTINE,,,,,,,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001093,PT-KjAsFy,Hs 604.T,HS604T,21.0,Commercial,SIDM01706,CVCL_0816,ZFIBLYM,Adult,Adherent,,,lymph_node,Male,ATCC,,,HS604T_FIBROBLAST,,Originally annotated as 'Lymphocyte' but after analysis we believe this line is a fibroblast.,,,,MF-002-001,None,,Fibroblast,Non-Cancerous,Fibroblast +ACH-001094,PT-epgMPc,HTK-,HTK,13.0,Commercial,SIDM00805,CVCL_2522,OS,Pediatric,Adherent,,Unknown,Unknown,Female,ECACC,,,HTK_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-001096,PT-BarDvA,JR,JR,,Academic lab,,CVCL_RT33,ARMS,Pediatric,Adherent,,,soft_tissue,Unknown,Matt Meyerson (Broad),,,JR_SOFT_TISSUE,,,,,,MF-001-001,None,ARMS,Alveolar Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-001097,PT-Q8gcpV,KARPAS384,KARPAS384,48.0,Academic lab,SIDM01737,CVCL_2541,ATLL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,,t_cell,,KARPAS384_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-003,None,ATLL,Adult T-Cell Leukemia/Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001098,PT-htpobI,KCI-MOH1,KCIMOH1,64.0,Commercial,,CVCL_2090,PAAD,Adult,Adherent,,Primary,pancreas,Female,DSMZ,exocrine_adenocarcinoma,,KCIMOH1_PANCREAS,,SNP fingerprinting confirms that this line is a HPAC derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001099,PT-FynJTm,KD,KD,0.0,Academic lab,,CVCL_U757,ATRT,Pediatric,Adherent,,,soft_tissue,Female,Roberts (St Jude Hospital),,,KD_SOFT_TISSUE,,,,,,MF-001-001,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-001100,PT-gWewrL,KHYG-1,KHYG1,45.0,Academic lab,SIDM01661,CVCL_2976,NKCLL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,,,,KHYG_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,,None,NKCLL,Natural Killer (NK) Cell Lymphoblastic Leukemia/Lymphoma (NKCLL),T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001101,PT-rg0sYD,KLM-1,KLM1,,Commercial,,CVCL_5146,PAAD,Unknown,Adherent,,Metastatic,liver,Male,RIKEN,exocrine_adenocarcinoma,,KLM1_PANCREAS,,,,,,,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001106,PT-6djQUQ,KOPN-8,KOPN8,0.0,Commercial,SIDM01034,CVCL_1866,BLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,b_cell,ACC 552,KOPN8_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330933.0,,1206.0,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001107,PT-cHU83i,KP-1N,KP1N,56.0,,SIDM00583,CVCL_3002,PAAD,Adult,Adherent,,Primary,pancreas,Male,,exocrine_adenocarcinoma,,KP1N_PANCREAS,1298216.0,SNP fingerprinting confirms that this line is a PANC-1 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,228.0,,,,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001109,PT-c4rduD,KP-MRT-RY,KPMRTRY,0.0,Academic lab,,CVCL_7051,MRT,Pediatric,Adherent,,,soft_tissue,Male,Roberts (St Jude Hospital),,,KPMRTRY_SOFT_TISSUE,,,,,,MF-001-001,None,MRT,Rhabdoid Cancer,Rhabdoid Cancer,Kidney +ACH-001111,PT-glFbpW,L82,L82,24.0,Academic lab,,CVCL_2098,ALCLALKP,Adult,Suspension,,,pleural_effusion,Female,,t_cell,,L82_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,ALCLALKP,Anaplastic Large-Cell Lymphoma ALK Positive,Non-Hodgkin Lymphoma,Lymphoid +ACH-001113,PT-ZglKg6,LC-1/sq-SF,LC1SQSF,69.0,Commercial,SIDM01226,CVCL_5480,LUSC,Adult,Adherent,,Primary,lung,Male,RIKEN,NSCLC_squamous,RCB0438,LC1SQSF_LUNG,,,,,,,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-001118,PT-DK2CQc,M059J,M059J,33.0,,SIDM00659,CVCL_0400,GB,Adult,Adherent,,Primary,central_nervous_system,Male,,,,M059J_CENTRAL_NERVOUS_SYSTEM,949094.0,,2225.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001119,PT-eHvuQ3,Mac-2A,MAC2A,47.0,Academic lab,,CVCL_H637,ALCLALKN,Adult,Suspension,,Metastatic,skin,Male,,t_cell,,MAC2A_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-017,None,ALCLALKN,Anaplastic Large-Cell Lymphoma ALK Negative,Non-Hodgkin Lymphoma,Lymphoid +ACH-001121,PT-2VMIkL,MEC2,MEC2,61.0,Commercial,SIDM00827,CVCL_1871,CLLSLL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,,MEC2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,,None,CLLSLL,Chronic Lymphocytic Leukemia/Small Lymphocytic Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001122,PT-UdxRuH,MKL-1,MKL1,26.0,Academic lab,,CVCL_2600,MCC,Adult,Suspension,,Metastatic,lymph_node,Male,DeCaprio (DFCI),,,MKL1_SKIN,,,,,,MF-001-003,None,MCC,Merkel Cell Carcinoma,Merkel Cell Carcinoma,Skin +ACH-001123,PT-XXNGhi,MKL-2,MKL2,72.0,Academic lab,,CVCL_D027,MCC,Adult,Suspension,,,skin,Male,DeCaprio (DFCI),,,MKL2_SKIN,,,,,,MF-001-003,None,MCC,Merkel Cell Carcinoma,Merkel Cell Carcinoma,Skin +ACH-001125,PT-wrjyKM,MOG-G-CCM,MOGGCCM,,,SIDM00532,CVCL_2613,AASTR,Unknown,Adherent,,Primary,central_nervous_system,Unknown,,,,MOGGCCM_CENTRAL_NERVOUS_SYSTEM,908144.0,,1383.0,,,,None,AASTR,Anaplastic Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-001126,PT-zDLyUv,MOG-G-UVW,MOGGUVW,,,SIDM00504,CVCL_2614,AASTR,Unknown,Adherent,,Primary,central_nervous_system,Male,,,,MOGGUVW_CENTRAL_NERVOUS_SYSTEM,908145.0,,1543.0,,,,None,AASTR,Anaplastic Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-001127,PT-1559gB,MOLT-4,MOLT4,19.0,Commercial,SIDM00145,CVCL_0013,TLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,ATCC,t_cell,,MOLT4_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,905958.0,,2227.0,,,MF-001-001,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001128,PT-u43maP,MON,MON,0.0,Academic lab,,CVCL_M846,ATRT,Pediatric,Adherent,,,soft_tissue,Male,Roberts (St Jude Hospital),,,MON_SOFT_TISSUE,,,,,,MF-001-001,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-001129,PT-ej13Dz,MONO-MAC-1,MONOMAC1,64.0,Commercial,SIDM01022,CVCL_1425,AMOL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,,ACC 252,MONOMAC1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-052,None,AMOL,Acute Monoblastic/Monocytic Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-001130,PT-A1W1kN,MOTN-1,MOTN1,65.0,Commercial,SIDM01884,CVCL_2127,TLGL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,DSMZ,t_cell,559,MOTN1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-051,None,TLGL,T-Cell Large Granular Lymphocytic Leukemia,Non-Hodgkin Lymphoma,Lymphoid +ACH-001131,PT-RgVcvG,MS-1,MSDASH1,59.0,Academic lab,SIDM00408,CVCL_E995,MCC,Adult,Suspension,,Metastatic,autonomic_ganglia,Female,DeCaprio (DFCI),,,MS1_SKIN,753594.0,,674.0,,,MF-001-020,None,MCC,Merkel Cell Carcinoma,Merkel Cell Carcinoma,Skin +ACH-001132,PT-amL0ty,MTA,MTA,58.0,Academic lab,SIDM01868,CVCL_3032,NKCLL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,,t_cell,,MTA_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,NKCLL,Natural Killer (NK) Cell Lymphoblastic Leukemia/Lymphoma (NKCLL),T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001134,PT-YD7WB8,MYLA,MYLA,,Academic lab,,,TLL,Unknown,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,,t_cell,,MYLA_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001136,PT-H7E2LW,NCI-H187,NCIH187,47.0,Commercial,SIDM00767,CVCL_1501,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Male,ATCC,,CRL-5804,NCIH187_LUNG,688007.0,,1323.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-001137,PT-v8h3uk,NCI-H1993,NCIH1993,47.0,Academic lab,SIDM00758,CVCL_1512,LUAD,Adult,Adherent,,Metastatic,lymph_node,Female,,NSCLC_adenocarcinoma,,NCIH1993_LUNG,908476.0,,78.0,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-001138,PT-XCPxrP,NCI-H2141,NCIH2141,58.0,Commercial,SIDM00699,CVCL_1534,SCLC,Adult,Suspension,,Metastatic,lymph_node,Male,ATCC,,CRL-5927,NCIH2141_LUNG,688014.0,,1537.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-001142,PT-8xkIWr,NHAHTDD,NHAHTDD,,Commercial,,CVCL_WS73,ZIMMEPCNS,Unknown,Unknown,,,central_nervous_system,Male,JCRB; Received from Gavin,,,NHAHTDD_PRIMARY,,,,,,,None,,"Immortalized Epithelial Cells, CNS",Non-Cancerous,CNS/Brain +ACH-001143,PT-grud9f,NKL,NKL,63.0,Academic lab,SIDM01880,CVCL_0466,NKCLL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,,,,NKL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,,None,NKCLL,Natural Killer (NK) Cell Lymphoblastic Leukemia/Lymphoma (NKCLL),T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001144,PT-bgvLGx,OC315,OC315,49.0,,,CVCL_1617,SOC,Adult,Adherent,,,ovary,Female,ICLC,serous,,OC315_OVARY,,,,,,,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001145,PT-3doOpy,OC 316,OC316,60.0,,SIDM00219,CVCL_1618,SOC,Adult,Adherent,,Metastatic,ascites,Female,ICLC,serous,,OC316_OVARY,,,,,,MF-001-014,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001146,PT-uTwd7n,OCI-Ly10,OCILY10,66.0,,SIDM01883,CVCL_8795,ABC,Adult,Suspension,,,lymph_node,Female,,DLBCL,,OCILY10_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,,None,ABC,Activated B-cell Type,Non-Hodgkin Lymphoma,Lymphoid +ACH-001147,PT-rlWyNR,OCI-Ly12,OCILY12,37.0,Academic lab,SIDM01882,CVCL_8796,FTCL,Adult,Suspension,,,lymph_node,Male,,t_cell,,OCILY12_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,FTCL,Follicular T-Cell Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001148,PT-pngX0a,OCILY-13,OCILY132,28.0,Academic lab,SIDM01877,CVCL_8797,DLBCLNOS,Adult,Suspension,,,bone_marrow,Female,,t_cell,,OCILY132_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-001150,PT-5G7P6A,OUMS-27,OUMS27,65.0,Commercial,,CVCL_3090,CHS,Adult,Adherent,,Primary,bone,Male,HSRRB,,,OUMS27_BONE,,,,,,MF-002-001,None,CHS,Chondrosarcoma,Chondrosarcoma,Bone +ACH-001151,PT-u4FBpq,OVCAR-5,OVCAR5,67.0,Academic lab,SIDM00091,CVCL_1628,HGSOC,Adult,Adherent,,Metastatic,ascites,Female,Received from CCLE; originally from Garraway lab,high_grade_serous,,OVCAR5_OVARY,905969.0,,1858.0,,,MF-001-014,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001162,PT-7JeWYM,PCM6,PCM6,63.0,Commercial,SIDM01776,CVCL_4666,PCM,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,RIKEN,,RCB1460,PCM6_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-023-004,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001163,PT-wOhyc6,CCLF_PEDS_0001_T,CCLFPEDS0001T,15.0,CCLF,,CVCL_B3PK,MRC,Pediatric,Adherent,,Metastatic,kidney,Male,,renal_medullary_carcinoma,,PEDS005TSUSP_KIDNEY,,Adherent version of CCLFPEDS0001T,,,Post-treatment,MF-001-001,None,MRC,Renal Medullary Carcinoma,Renal Cell Carcinoma,Kidney +ACH-001164,PT-VJQa5v,CCLF_PEDS_0003_T,CCLFPEDS0003T,,CCLF,,CVCL_B3PL,MFH,Pediatric,Adherent,,,soft_tissue,Male,,,,CCLFPEDS0003T_SOFT_TISSUE,,,,,,,None,MFH,Undifferentiated Pleomorphic Sarcoma/Malignant Fibrous Histiocytoma/High-Grade Spindle Cell Sarcoma,Undifferentiated Pleomorphic Sarcoma/Malignant Fibrous Histiocytoma/High-Grade Spindle Cell Sarcoma,Soft Tissue +ACH-001170,PT-edrO6Y,PeTa,PETA,65.0,Academic lab,SIDM01848,CVCL_LC73,MCC,Adult,Unknown,,,skin,Male,DeCaprio (DFCI),,,PETA_SKIN,,,,,,MF-001-001,None,MCC,Merkel Cell Carcinoma,Merkel Cell Carcinoma,Skin +ACH-001171,PT-9JMXWA,PL45,PL45,81.0,Commercial,SIDM01115,CVCL_3567,PAAD,Adult,Adherent,,Primary,pancreas,Male,ATCC,exocrine_adenocarcinoma,,PL45_PANCREAS,,,,,,,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001172,PT-88IC1n,U-251 MG,U251MGDM,75.0,Commercial,,,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,HSRRB via Bandhyopadhyay (Broad),astrocytoma,,U251MGDM_Brain,,,,,,MF-015-011,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-001175,PT-cSAYbR,RCC-4,RCC4,,Academic lab,,CVCL_0498,CCRCC,Unknown,Adherent,,Primary,kidney,Unknown,Bill Kaelin (DFCI),clear_cell,,RCC4_KIDNEY,,,,,,,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-001182,PT-sJzdOB,RPMI 6666,RPMI6666,29.0,Commercial,SIDM00813,CVCL_1665,BLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,ATCC,,,RPMI6666_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909701.0,,961.0,,,,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001183,PT-ESM25t,RT112/84,RT11284,,Commercial,SIDM01202,CVCL_2714,BLCA,Unknown,Adherent,,Primary,urinary_tract,Female,ECACC,,,RT11284_URINARY_TRACT,,,,,,MF-006-002,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-001184,PT-4E3Ck9,SCMC-RM2,SCMCRM2,11.0,Academic lab,,CVCL_A667,ERMS,Pediatric,Adherent,PAX3_FKHR,Metastatic,bone_marrow,Female,Beat Schaefer (The Institute of Cancer Research),,,SCMCRM2_SOFT_TISSUE,,,,,,MF-002-001,None,ERMS,Embryonal Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-001188,PT-ombRgU,SH-SY5Y,SHSY5Y,4.0,Commercial,SIDM01236,CVCL_0019,NBL,Pediatric,Adherent,MYCN_amp,Metastatic,bone_marrow,Female,ATCC,,CRL-2266,SHSY5Y_AUTONOMIC_GANGLIA,,,,,,MF-027-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001189,PT-lbYOig,SJRH-30,SJRH30,17.0,Commercial,SIDM01095,CVCL_0041,ARMS,Pediatric,Adherent,,Metastatic,bone_marrow,Male,ATCC,,,SJRH30_SOFT_TISSUE,909716.0,,2260.0,,,,None,ARMS,Alveolar Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-001190,PT-IHNbDy,SK-MEL-2,SKMEL2,60.0,Commercial,SIDM00082,CVCL_0069,MEL,Adult,Adherent,,Metastatic,skin,Male,ATCC,,HTB-68,SKMEL2_SKIN,905955.0,,1191.0,,,MF-006-001,None,MEL,Melanoma,Melanoma,Skin +ACH-001192,PT-MPUfgI,SK-NEP-1,SKNEP1,25.0,Academic lab,SIDM00027,CVCL_0631,ES,Adult,Suspension,EWS_FLI,Metastatic,pleural_effusion,Female,Kim Stegmaier (Broad),,,SKNEP1_BONE,,,,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001193,PT-zjZ0Ko,SK-PN-DW,SKPNDW,17.0,Academic lab,SIDM01097,CVCL_1703,ES,Pediatric,Adherent,EWS_FLI,,Embryonal,Male,Kim Stegmaier (Broad),,,SKPNDW_BONE,909731.0,,946.0,,,MF-002-001,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001194,PT-sWRqxl,SK-RC-31,SKRC31,,Academic lab,,CVCL_6186,RCC,Unknown,Adherent,,Metastatic,lung,Male,Bill Kaelin (DFCI),,,SKRC31_KIDNEY,,,,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-001196,PT-9a1vbV,SMS-CTR,SMSCTR,1.0,Academic lab,,CVCL_A770,ERMS,Pediatric,Adherent,,,soft_tissue,Male,Matt Meyerson (Broad),embryonal,,SMSCTR_SOFT_TISSUE,,,,,,MF-002-001,None,ERMS,Embryonal Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-001197,PT-3YIeN9,SMZ-1,SMZ1,46.0,Academic lab,,CVCL_RL84,MTNN,Adult,Suspension,,Metastatic,ascites,Male,,,,SMZ1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,Unknown,MF-001-001,None,MTNN,Mature T and NK Neoplasms,Non-Hodgkin Lymphoma,Lymphoid +ACH-001198,PT-88IC1n,SNB19,SNB19,47.0,Commercial,SIDM00109,CVCL_0535,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,DSMZ,glioblastoma,,SNB19_CENTRAL_NERVOUS_SYSTEM,,Contaminated. Shown to be a U-251MG derivative.,,,,,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-001199,PT-GfrL06,SNUC2B,SNUC2B,43.0,,SIDM00781,CVCL_1710,COAD,Adult,Mixed,,Primary,large_intestine,Female,Asterand,,,SNUC2B_LARGE_INTESTINE,909740.0,,37.0,,,,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001200,PT-XDzUk4,STM91-01,STM9101,0.0,Academic lab,,CVCL_8000,MRT,Pediatric,Adherent,,Metastatic,lung,Male,Roberts (St Jude Hospital),,,STM9101_SOFT_TISSUE,,,,,,MF-001-003,None,MRT,Rhabdoid Cancer,Rhabdoid Cancer,Kidney +ACH-001201,PT-ONhJf5,SU-MB-002,SUMB002,,Academic lab,,CVCL_VU79,MBL,Pediatric,Adherent,,Primary,central_nervous_system,Unknown,Cho (OHSU),,,SUMB002_CENTRAL_NERVOUS_SYSTEM,,,,,,,None,MBL,Medulloblastoma,Embryonal Tumor,CNS/Brain +ACH-001203,PT-rxxQHV,SUP-HD1,SUPHD1,37.0,Commercial,SIDM00422,CVCL_2208,HL,Adult,Suspension,,,pleural_effusion,Male,DSMZ,,,SUPHD1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331039.0,,1451.0,,,MF-023-003,None,HL,Hodgkin Lymphoma,Hodgkin Lymphoma,Lymphoid +ACH-001205,PT-eQaQl0,TC-32,TC32,17.0,Academic lab,,CVCL_7151,ES,Pediatric,Adherent,EWS_FLI,Primary,bone,Female,Kim Stegmaier (Broad),,,TC32_BONE,,,,,,MF-001-003,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001206,PT-Rd7WW0,TTC-466,TTC466,2.0,,SIDM01911,CVCL_A444,ES,Pediatric,Unknown,,Primary,bone,Female,,,,TCC466_BONE,,,,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001207,PT-2m2BT9,TIG-3 TD,TIG3TD,,Academic lab,,CVCL_V617,ZFIBLUN,Fetus,Adherent,,,fibroblast,Male,originally Boehm (Broad),,,TIG3TD_FIBROBLAST,,,,,,,None,,"Fibroblast, Lung",Non-Cancerous,Fibroblast +ACH-001208,PT-KoSg1m,TK-10,TK10,43.0,,SIDM00113,CVCL_1773,CCRCC,Adult,Unknown,,Primary,kidney,Male,,,,TK10_KIDNEY,905980.0,,1401.0,,,,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-001210,PT-zlBs5P,TTC-1240,TTC1240,0.0,Academic lab,,CVCL_8002,MRT,Pediatric,Adherent,,Metastatic,central_nervous_system,Female,Roberts (St Jude Hospital),,,TTC1240_SOFT_TISSUE,,,,,,,None,MRT,Rhabdoid Cancer,Rhabdoid Cancer,Kidney +ACH-001211,PT-ZmNOms,TTC-549,TTC549,6.0,Academic lab,,CVCL_8005,ATRT,Pediatric,Adherent,,,soft_tissue,Female,Roberts (St Jude Hospital),,,TTC549_SOFT_TISSUE,,,,,,MF-001-001,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-001212,PT-EY60tR,TTC-642,TTC642,1.0,Academic lab,,CVCL_8006,ATRT,Pediatric,Adherent,,,soft_tissue,Female,Roberts (St Jude Hospital),,,TTC642_SOFT_TISSUE,,,,,,MF-001-001,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-001214,PT-5XnRfQ,U-138 MG,U138MG,47.0,Commercial,SIDM01192,CVCL_0020,GB,Adult,Adherent,,Primary,brain,Male,ATCC,,HTB-16,U138MG_CENTRAL_NERVOUS_SYSTEM,,,,,Unknown,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001224,PT-E0NX5O,UM-RC-2,UMRC2,,,SIDM01830,CVCL_2739,CCRCC,Unknown,Adherent,,Primary,kidney,Unknown,,,,UMRC2_KIDNEY,,,,,,,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-001225,PT-Bh5u27,,UMRC6NEO,,,SIDM01829,CVCL_2741,RCC,Unknown,Adherent,,Primary,kidney,Male,,,,UMRC6_KIDNEY,,,,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-001227,PT-k3C7C0,UPCI-SCC-090,UPCISCC090,46.0,Commercial,SIDM00399,CVCL_1899,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,DSMZ via Academic lab?,oral,,UPCISCC090_UPPER_AERODIGESTIVE_TRACT,1299052.0,,864.0,,,MF-015-003,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001228,PT-k3C7C0,UPCI-SCC-152,UPCISCC152,47.0,Academic lab,SIDM00398,CVCL_C058,OCSC,Adult,Adherent,,,upper_aerodigestive_tract,Male,Jgrandis (Univ of Michigan),oral,,UPCISCC152_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-015-002,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001229,PT-FRJzoR,UPCI-SCC-154,UPCISCC154,54.0,Commercial,,CVCL_2230,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,DSMZ via Academic lab?,oral,669,UPCISCC154_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-006-002,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001230,PT-EnYQdN,UT-7,UT7,64.0,Commercial,SIDM01908,CVCL_2233,AMKL,Adult,Mixed,,,bone_marrow,Male,DSMZ,,,UT7_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,SNP fingerprinting rules out U-937 contamination.,,,,MF-003-002,None,AMKL,Acute Megakaryoblastic Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-001232,PT-Qe9Gjx,UW228,UW228,9.0,Academic lab,,CVCL_8585,MBL,Pediatric,Adherent,non_MYC,Primary,central_nervous_system,Male,Mimi Bandhyopadhyay (Broad),,,UW228_CENTRAL_NERVOUS_SYSTEM,,Cell line thought to be female but has Y chromosome expression.,,,,,None,MBL,Medulloblastoma,Embryonal Tumor,CNS/Brain +ACH-001233,PT-whmZjB,VMRC-LCD,VMRCLCD,,Commercial,SIDM00320,CVCL_1787,LUAD,Unknown,Mixed,,Primary,lung,Male,HSRRB,NSCLC_adenocarcinoma,,VMRCLCD_LUNG,713869.0,,277.0,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-001234,PT-MTIfex,VMRC-LCP,VMRCLCP,,Commercial,,CVCL_1788,LUSC,Unknown,Mixed,,Primary,lung,Unknown,HSRRB,NSCLC_squamous,,VMRCLCP_LUNG,,,,,,,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-001239,PT-JAyPtz,WM-266-4,WM2664,55.0,Commercial,SIDM00979,CVCL_2765,MEL,Adult,Adherent,,Metastatic,skin,Female,ATCC,,*Couldn't find on ATCC,WM2664_SKIN,,,,,,MF-002-001,None,MEL,Melanoma,Melanoma,Skin +ACH-001249,PT-k1TO7o,YMB-1,YMB1,63.0,Commercial,SIDM01260,CVCL_2814,IDC,Adult,Mixed,luminal,Metastatic,ascites,Female,HSRRB,,,YMB1_BREAST,,This line is a ZR-75-1 derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,MF-001-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001270,PT-isOde8,1273/99,127399,,Academic lab,,CVCL_N588,SYNS,Pediatric,Adherent,,,soft_tissue,Male,Cigall Kadoch (Broad),,,127399_SOFT_TISSUE,,,,,,,None,SYNS,Synovial Sarcoma,Synovial Sarcoma,Soft Tissue +ACH-001272,PT-dd28j8,Fuji,FUJI,60.0,Academic lab,,CVCL_D880,SYNS,Adult,Adherent,,,soft_tissue,Female,Kadoch (Broad),,,FUJI_SOFT_TISSUE,,,,,,,None,SYNS,Synovial Sarcoma,Synovial Sarcoma,Soft Tissue +ACH-001274,PT-IfpyhV,SW982,SW982,25.0,Academic lab,SIDM01161,CVCL_1734,SYNS,Adult,Adherent,,,soft_tissue,Female,Kadoch (Broad),,,SW982_SOFT_TISSUE,909759.0,,1560.0,,,MF-021-001,None,SYNS,Synovial Sarcoma,Synovial Sarcoma,Soft Tissue +ACH-001275,PT-WqcWC9,SYO1,SYO1,19.0,Academic lab,,CVCL_7146,SYNS,Adult,Adherent,,,soft_tissue,Female,Kadoch (Broad),,,SYO1_SOFT_TISSUE,,,,,,,None,SYNS,Synovial Sarcoma,Synovial Sarcoma,Soft Tissue +ACH-001277,PT-yyLDZV,Yamato,YAMATO,30.0,Academic lab,,CVCL_6C44,SYNS,Adult,Adherent,,Metastatic,soft_tissue,Male,Kadoch (Broad),,,YAMATO_SOFT_TISSUE,,,,,,,None,SYNS,Synovial Sarcoma,Synovial Sarcoma,Soft Tissue +ACH-001278,PT-ZkKui4,BIN-67,BIN67,,Academic lab,,CVCL_S987,SCCO,Pediatric,Adherent,,Metastatic,bone,Female,Kadoch (Broad),,,BIN67_OVARY,,,,,,MF-007-019,None,SCCO,Small Cell Carcinoma of the Ovary,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001279,PT-z5pG5i,SCCOHT-1,SCCOHT1,31.0,Academic lab,,CVCL_VU69,SCCO,Adult,Adherent,,,ovary,Female,Cigall Kadoch (Broad) via Josh Pan,,,SCCOHT1_OVARY,,,,,,MF-001-003,None,SCCO,Small Cell Carcinoma of the Ovary,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001280,PT-u27nif,SCS-214,SCS214,,Academic lab,,CVCL_WU91,SYNS,Pediatric,Adherent,,,soft_tissue,Unknown,Kadoch (Broad),,,SCS214_SOFT_TISSUE,,,,,,MF-002-009,None,SYNS,Synovial Sarcoma,Synovial Sarcoma,Soft Tissue +ACH-001282,PT-uiabZo,CHLA258,CHLA258,14.0,Academic lab,,CVCL_A058,ES,Pediatric,Adherent,EWS_FLI,Primary,bone,Female,Children's Oncology Group,,,CHLA258_BONE,,,,,,MF-005-005,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001283,PT-yXtSGR,TC-106,TC106,19.0,Academic lab,,CVCL_F531,ES,Adult,Adherent,EWS_ERG,Metastatic,skin,Male,Kim Stegmaier (Broad),,,TC106_BONE,,,,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001289,PT-773uN4,COG-AR-359,COGAR359,,Academic lab,,CVCL_RS25,ATRT,Pediatric,Suspension,,,central_nervous_system,Male,Children's Oncology Group,,,COGAR359_SOFT_TISSUE,,,,,,MF-005-005,None,ATRT,Atypical Teratoid/Rhabdoid Tumor,Embryonal Tumor,CNS/Brain +ACH-001295,PT-KinR5m,Y-79,Y79,2.0,Commercial,,CVCL_1893,RBL,Pediatric,Suspension,,Primary,eye,Female,ATCC,,,Y79_AUTONOMIC_GANGLIA,,,,,,MF-001-020,None,RBL,Retinoblastoma,Retinoblastoma,Eye +ACH-001300,PT-ZhCETu,CHLA15,CHLA15,1.0,Academic lab,,CVCL_6594,NBL,Pediatric,Mixed,,Primary,autonomic_ganglia,Female,Children's Oncology Group,,Unavailable,CHLA15_AUTONOMIC_GANGLIA,,,,,Unknown,MF-005-005,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001301,PT-9ShVj5,COGN278,COGN278,4.0,Academic lab,,CVCL_AX49,NBL,Pediatric,Adherent,MYCN_amp,Unknown,autonomic_ganglia,Unknown,Children's Oncology Group,,Unavailable,COGN278_AUTONOMIC_GANGLIA,,,,,Unknown,MF-005-005,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001302,PT-37DeSd,COG-N-305,COGN305,1.0,Academic lab,,CVCL_AX42,NBL,Pediatric,Mixed,MYCN_amp,Unknown,autonomic_ganglia,Unknown,Children's Oncology Group,,Unavailable,COGN305_AUTONOMIC_GANGLIA,,,,,Unknown,MF-005-005,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001303,PT-IFd9cu,NB-1643,NB1643,3.0,Academic lab,,CVCL_5627,NBL,Pediatric,Adherent,MYCN_amp,Unknown,abdomen,Male,Kadoch (Broad),,,NB1643_AUTONOMIC_GANGLIA,,,,,Unknown,MF-005-005,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001306,PT-Dn9adW,8305C,8305C,67.0,Commercial,SIDM00997,CVCL_1053,THAP,Adult,Adherent,,Primary,thyroid,Female,DSMZ,,133,8305C_THYROID,906795.0,,433.0,,,MF-001-017,None,THAP,Anaplastic Thyroid Cancer,Anaplastic Thyroid Cancer,Thyroid +ACH-001307,PT-1llqWx,8505C,8505C,78.0,Commercial,SIDM00996,CVCL_1054,THAP,Adult,Adherent,,Primary,thyroid,Female,HSRRB,,JCRB0826,8505C_THYROID,924102.0,,868.0,,,MF-015-002,None,THAP,Anaplastic Thyroid Cancer,Anaplastic Thyroid Cancer,Thyroid +ACH-001310,PT-1UiNjR,HA1E,HA1E,,Academic lab,,CVCL_VU89,ZIMMEKC,Unknown,Adherent,,,kidney,Male,CMAP,,,HA1E_KIDNEY,,SV40+TERT immortalized kidney cell line,,,,MF-006-001,None,,Immortalized Embyonic Kidney Cells,Non-Cancerous,Kidney +ACH-001318,PT-E7izN5,PLC/PRF/5,PLCPRF5,24.0,Commercial,,CVCL_0485,HCC,Adult,Adherent,,Primary,liver,Male,ATCC,,CRL-8024,PLCPRF5_LIVER,,,,,,MF-002-001,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-001321,PT-RAH5Wu,TT,TT,77.0,Commercial,SIDM00484,CVCL_1774,THME,Adult,Adherent,,Primary,thyroid,Female,ATCC,,CRL-1803,TT_THYROID,,,,,,MF-004-001,None,THME,Medullary Thyroid Cancer,Medullary Thyroid Cancer,Thyroid +ACH-001322,PT-NzxvhN,CME-1,CME1,,Academic lab,,CVCL_N586,SYNS,Pediatric,Adherent,,,soft_tissue,Female,Kadoch (Broad),,,CME1_SOFT_TISSUE,,,,,,,None,SYNS,Synovial Sarcoma,Synovial Sarcoma,Soft Tissue +ACH-001328,PT-BB1vF7,A-431,A431,85.0,Commercial,SIDM00995,CVCL_0037,CSCC,Adult,Adherent,,Primary,skin,Female,ATCC,,CRL-1555,A431_SKIN,910925.0,,97.0,,,MF-002-001,None,CSCC,Cutaneous Squamous Cell Carcinoma,Cutaneous Squamous Cell Carcinoma,Skin +ACH-001329,PT-tYbbCQ,ANGM-CSS,ANGMCSS,65.0,Commercial,,CVCL_2297,GB,Adult,Adherent,,Primary,central_nervous_system,Male,Sigma-Aldrich,glioblastoma,8040401,ANGMCSS_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-007-002,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001331,PT-oQXmqM,BICR 10,BICR10,,Commercial,SIDM00077,CVCL_2307,OCSC,Unknown,Adherent,,Primary,upper_aerodigestive_tract,Female,Sigma-Aldrich,oral,,BICR10_UPPER_AERODIGESTIVE_TRACT,1290724.0,,1676.0,,,MF-002-004,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001332,PT-aRE4u7,BICR 78,BICR78,,Commercial,SIDM00501,CVCL_2315,OCSC,Unknown,Adherent,,Primary,upper_aerodigestive_tract,Male,Sigma-Aldrich,oral,4072111,BICR78_UPPER_AERODIGESTIVE_TRACT,1240122.0,,913.0,,,MF-002-004,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001333,PT-9q6tDV,C-33 A,C33A,66.0,Commercial,SIDM00889,CVCL_1094,CESC,Adult,Adherent,,Primary,cervix,Female,ATCC,,HTB-31,C33A_CERVIX,687505.0,,1761.0,,,MF-015-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-001334,PT-ERAmPK,C-4 I,C4I,41.0,Commercial,SIDM00905,CVCL_2253,CESC,Adult,Adherent,,Primary,cervix,Female,ATCC,,CRL-1594,C4I_CERVIX,687506.0,,561.0,,,MF-020-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-001335,PT-ERAmPK,C-4 II,C4II,41.0,Commercial,SIDM00906,CVCL_1095,CESC,Adult,Adherent,,Primary,cervix,Female,ATCC,,,C4II_CERVIX,,,,,,MF-020-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-001336,PT-QAGzTB,Ca Ski,CASKI,40.0,Commercial,SIDM00923,CVCL_1100,CESC,Adult,Adherent,,Metastatic,small_intestine,Female,ATCC,,CRL-1550,CASKI_CERVIX,906824.0,,1767.0,,,MF-001-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-001338,PT-cvCz0R,CHP-134,CHP134,1.0,Commercial,SIDM00285,CVCL_1124,NBL,Pediatric,Adherent,MYCN_amp,Primary,autonomic_ganglia,Male,Sigma-Aldrich,,,CHP134_AUTONOMIC_GANGLIA,910941.0,,1562.0,,,MF-001-003,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001339,PT-hf4hbl,Colo 794,COLO794,14.0,Commercial,SIDM00514,CVCL_2408,SKCM,Pediatric,Adherent,,Primary,skin,Male,Sigma-Aldrich,,,COLO794_SKIN,,,,,,MF-001-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-001340,PT-G1dQTb,COV413A,COV413A,,Commercial,,CVCL_2422,SOC,Unknown,Adherent,,Metastatic,large_intestine,Female,Sigma-Aldrich,,,COV413A_OVARY,,,,,,MF-002-001,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001341,PT-tTbVoL,DoTc2 4510,DOTC24510,,Commercial,SIDM00864,CVCL_1181,MCCE,Unknown,Adherent,,Primary,cervix,Female,ATCC,,CRL-7920,DOTC24510_CERVIX,906843.0,,473.0,,,MF-002-001,None,MCCE,Mixed Cervical Carcinoma,Mixed Cervical Carcinoma,Cervix +ACH-001344,PT-smWXLD,GI-ME-N,GIMEN,3.0,Commercial,SIDM00227,CVCL_1232,NBL,Pediatric,Adherent,,Metastatic,bone_marrow,Female,DSMZ,,ACC 654,GIMEN_AUTONOMIC_GANGLIA,906872.0,,1530.0,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001345,PT-sGJOXH,GP5d,GP5D,71.0,Commercial,SIDM00537,CVCL_1235,COAD,Adult,Adherent,,Primary,Colon,Female,Sigma-Aldrich,,95090715,GP5D_LARGE_INTESTINE,907291.0,,741.0,,,MF-002-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001346,PT-VXDXrs,H103,H103,32.0,Commercial,,CVCL_2457,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,Sigma-Aldrich,buccal_mucosa,6092001,H103_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-007-003,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001347,PT-C880aD,H157,H157,84.0,Commercial,,CVCL_2458,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,Sigma-Aldrich,buccal_mucosa,7030901,H157_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-007-003,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001350,PT-KgSHOe,HTC-C3,HTCC3,44.0,Commercial,SIDM00496,CVCL_1295,THAP,Adult,Adherent,,Metastatic,pleural_effusion,Female,DSMZ,giant_cell,580,HTCC3_THYROID,924151.0,,329.0,,,MF-002-009,None,THAP,Anaplastic Thyroid Cancer,Anaplastic Thyroid Cancer,Thyroid +ACH-001353,PT-dEG8Km,JOPACA-1,JOPACA1,46.0,Commercial,,CVCL_S507,PAAD,Adult,Adherent,,Primary,pancreas,Male,DSMZ,exocrine_adenocarcinoma,ACC 744,JOPACA1_PANCREAS,,,,,,MF-005-004,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001354,PT-6gsVP1,LAN-2,LAN2,3.0,Commercial,,CVCL_1829,NBL,Pediatric,Adherent,MYCN_amp,Primary,autonomic_ganglia,Female,DSMZ,,,LAN2_AUTONOMIC_GANGLIA,,,,,,MF-038-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001355,PT-SszZYn,LAN-6,LAN6,6.0,Commercial,SIDM00330,CVCL_1363,NBL,Pediatric,Adherent,,Metastatic,bone_marrow,Male,DSMZ,,,LAN6_AUTONOMIC_GANGLIA,949170.0,,278.0,,,MF-002-009,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001356,PT-b1GXgx,MB-1,MB1,57.0,Commercial,,CVCL_2109,THAP,Adult,Adherent,,Primary,thyroid,Male,DSMZ,anaplastic,ACC 638,MB1_THYROID,,,,,,MF-001-021,None,THAP,Anaplastic Thyroid Cancer,Anaplastic Thyroid Cancer,Thyroid +ACH-001357,PT-mrGSYl,MCF 10A,MCF10A,36.0,Commercial,,CVCL_0598,ZIMMBR,Adult,Adherent,,Primary,breast,Female,ATCC,,CRL-10317,MCF10A_BREAST,,,,,,MF-017-002,None,,Immortalized Breast Cells,Non-Cancerous,Breast +ACH-001358,PT-iJJxvM,MDA-MB-330,MDAMB330,43.0,Commercial,SIDM00631,CVCL_0619,ILC,Adult,Adherent,,Metastatic,pleural_effusion,Female,ATCC,,HTB-127,MDAMB330_BREAST,1330941.0,,1989.0,,,MF-021-004,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001359,PT-Ag8pMW,ME-180,ME180,66.0,Commercial,SIDM00627,CVCL_1401,CESC,Adult,Adherent,,Metastatic,abdomen,Female,ATCC,,HTB-33,ME180_CERVIX,687514.0,,1040.0,,,MF-023-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-001360,PT-wH5ORo,MS751,MS751,47.0,Commercial,SIDM00638,CVCL_4996,CESC,Adult,Adherent,,Metastatic,lymph_node,Female,ATCC,,HTB-34,MS751_CERVIX,1240179.0,,386.0,,,MF-015-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-001362,PT-lWWpjR,NCI-H1770,NCIH1770,57.0,Commercial,SIDM00737,CVCL_1493,NSCLC,Adult,Suspension,,Metastatic,lymph_node,Male,ATCC,,CRL-5893,NCIH1770_LUNG,687804.0,,1014.0,,,MF-013-001,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-001363,PT-CEEaIh,NCI-H2135,NCIH2135,,Commercial,SIDM00700,CVCL_1533,NSCLC,Unknown,Adherent,,Primary,lung,Unknown,ATCC,,CRL-5926,NCIH2135_LUNG,1298352.0,,106.0,,,MF-007-010,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-001364,PT-hcoylX,NCI-H345,NCIH345,64.0,Commercial,SIDM00719,CVCL_1558,SCLC,Adult,Mixed,,Metastatic,bone_marrow,Male,ATCC,,HTB-180,NCIH345_LUNG,688021.0,,1615.0,,,MF-007-017,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-001365,PT-mKeYkk,NCI-H847,NCIH847,63.0,Commercial,SIDM01149,CVCL_1596,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Male,ATCC,,CRL-5846,NCIH847_LUNG,1240193.0,,630.0,,,MF-007-010,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-001366,PT-jZHQTi,NGP,NGP,2.0,Commercial,,CVCL_2141,NBL,Pediatric,Adherent,MYCN_amp,Metastatic,lung,Male,DSMZ,,,NGP_AUTONOMIC_GANGLIA,,,,,,MF-002-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001367,PT-7QJIsM,NMB,NMB,0.0,Commercial,,CVCL_2143,NBL,Pediatric,Adherent,MYCN_amp,Metastatic,bone_marrow,Female,DSMZ,,,NMB_AUTONOMIC_GANGLIA,,,,,,MF-002-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001368,PT-1Sm4U9,OAC-M5.1,OACM51,47.0,Commercial,SIDM00444,CVCL_1842,ESCA,Adult,Suspension,,Metastatic,lymph_node,Female,DSMZ,,ACC 696,OACM51_OESOPHAGUS,1503363.0,,752.0,,,MF-001-020,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-001369,PT-0GisSs,OCI-C5x,OCIC5X,,Academic lab,,CVCL_DH06,CCOV,Unknown,Adherent,,Primary,ovary,Female,(University of Miami),clear_cell,,OCIC5X_OVARY,,,,,,MF-035-001,None,CCOV,Clear Cell Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001370,PT-rC8bwa,OCI-P5x,OCIP5X,,Academic lab,,CVCL_DH18,SOC,Unknown,Adherent,,Primary,ovary,Female,(University of Miami),serous,,OCIP5X_OVARY,,,,,,MF-035-001,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001373,PT-ND5kWh,OV17R,OV17R,50.0,Commercial,SIDM00476,CVCL_2672,SOC,Adult,Adherent,,Metastatic,ascites,Female,Sigma-Aldrich,,96020763,OV17R_OVARY,1480361.0,,986.0,,,MF-007-009,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001374,PT-EoMkUH,PA-1 [PA1],PA1,12.0,Commercial,SIDM01140,CVCL_0479,OMGCT,Pediatric,Adherent,,Metastatic,ascites,Female,ATCC,,CRL-1572,PA1_OVARY,909255.0,,643.0,,,MF-015-001,None,OMGCT,Mixed Germ Cell Tumor,Ovarian Germ Cell Tumor,Ovary/Fallopian Tube +ACH-001375,PT-F5I5LU,PACADD-119,PACADD119,59.0,Commercial,,CVCL_1848,PAAD,Adult,Adherent,,Primary,pancreas,Male,DSMZ,exocrine_adenocarcinoma,ACC 709,PACADD119_PANCREAS,,,,,,MF-008-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001376,PT-4cABry,PACADD-135,PACADD135,48.0,Commercial,,CVCL_1849,PAAD,Adult,Adherent,,Metastatic,lymph_node,Female,DSMZ,exocrine_adenocarcinoma,,PACADD135_PANCREAS,,,,,,MF-002-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001377,PT-gL0WpK,PACADD-137,PACADD137,75.0,Commercial,,CVCL_1850,PAAD,Adult,Adherent,,Primary,pancreas,Female,DSMZ,exocrine_adenocarcinoma,ACC 711,PACADD137_PANCREAS,,,,,,MF-008-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001378,PT-oPsAd9,PACADD-159,PACADD159,78.0,Commercial,,CVCL_M465,PAAD,Adult,Adherent,,Primary,pancreas,Male,DSMZ,exocrine_adenocarcinoma,,PACADD159_PANCREAS,,,,,,MF-008-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001379,PT-wftWQy,PACADD-161,PACADD161,63.0,Commercial,,CVCL_M466,PAAD,Adult,Adherent,,Metastatic,liver,Female,DSMZ,exocrine_adenocarcinoma,ACC 746,PACADD161_PANCREAS,,,,,,MF-008-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001380,PT-8QBQO2,PACADD-165,PACADD165,54.0,Commercial,,CVCL_M467,PAAD,Adult,Adherent,,Metastatic,ascites,Male,DSMZ,exocrine_adenocarcinoma,,PACADD165_PANCREAS,,,,,,MF-008-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001382,PT-eGohb8,PACADD-188,PACADD188,68.0,Commercial,,CVCL_M469,PAAD,Adult,Adherent,,Metastatic,pancreas,Female,DSMZ,exocrine_adenocarcinoma,,PACADD188_PANCREAS,,,,,,MF-008-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-001383,PT-w5hVvu,PWR-1E,PWR1E,67.0,Commercial,SIDM01114,CVCL_3775,ZIMMPRO,Adult,Adherent,,Primary,prostate,Male,ATCC,,CRL-11611,PWR1E_PROSTATE,1330993.0,,23.0,,,MF-016-001,None,,Immortalized Prostate Cells,Non-Cancerous,Prostate +ACH-001384,PT-F6euB4,RO82-W-1,RO82W1,,Commercial,SIDM00218,CVCL_0582,THFO,Unknown,Adherent,,Metastatic,thyroid,Female,Sigma-Aldrich,follicular,92030502,RO82W1_THYROID,930083.0,,1983.0,,,MF-027-001,None,THFO,Follicular Thyroid Cancer,Well-Differentiated Thyroid Cancer,Thyroid +ACH-001385,PT-a3pn8l,RPMI 2650,RPMI2650,52.0,Commercial,SIDM00809,CVCL_1664,HNSC,Adult,Adherent,,Metastatic,pleural_effusion,Male,ATCC,,CCL-30,RPMI2650_UPPER_AERODIGESTIVE_TRACT,909700.0,,1163.0,,,MF-015-001,None,HNSC,Head and Neck Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001386,PT-hfsFIb,SCLC-22H,SCLC22H,46.0,Commercial,SIDM00028,CVCL_2186,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Male,DSMZ,,,SCLC22H_LUNG,,,,,,MF-002-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-001388,PT-UklPiT,SUM-102PT,SUM102PT,57.0,,,CVCL_3421,IDC,Adult,Suspension,basal,Primary,breast,Female,Asterand,ERneg_HER2neg,,SUM102PT_BREAST,,,,,,MF-004-006,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001389,PT-huyXeM,SUM-1315MO2,SUM1315MO2,,,,CVCL_5589,IDC,Unknown,Adherent,basal,Metastatic,skin,Female,Asterand,ERneg_HER2neg,,SUM1315MO2_BREAST,,,,,,MF-004-004,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001390,PT-SMhk4C,SUM-149PT,SUM149PT,40.0,,,CVCL_3422,IDC,Adult,Adherent,basal_B,Primary,breast,Female,Asterand,ERneg_HER2neg,,SUM149PT_BREAST,,,,,,MF-004-008,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001391,PT-OlQpj4,SUM-159PT,SUM159PT,71.0,,,CVCL_5423,BRCA,Adult,Adherent,basal_B,Primary,breast,Female,Asterand,ERneg_HER2neg,,SUM159PT_BREAST,,,,,,MF-004-005,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001392,PT-i9dYpA,SUM-185PE,SUM185PE,,,,CVCL_5591,BRCA,Unknown,Adherent,luminal,Metastatic,pleural_effusion,Female,Asterand,ERneg_HER2neg,,SUM185PE_BREAST,,,,,,MF-004-005,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001393,PT-Zd61pI,SUM-190PT,SUM190PT,,,,CVCL_3423,BRCA,Unknown,Suspension,basal_A,Primary,breast,Female,Asterand,ERneg_HER2pos,,SUM190PT_BREAST,,,,,,MF-004-006,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001394,PT-jgjbSo,SUM-229PE,SUM229PE,,,,CVCL_5594,BRCA,Unknown,Adherent,basal,Metastatic,pleural_effusion,Female,Asterand,ERneg_HER2neg,,SUM229PE_BREAST,,SNP fingerprinting rules out SUM149PT contamination.,,,,MF-004-005,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001395,PT-VCE3zi,SUM-44PE,SUM44PE,,Commercial,,CVCL_3424,ILC,Unknown,Adherent,luminal,Metastatic,pleural_effusion,Female,Asterand (BioIVT),ERpos_HER2pos,,SUM44PE_BREAST,,,,,,MF-004-006,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001396,PT-sYFvXw,SUM-52PE,SUM52PE,,,,CVCL_3425,BRCA,Unknown,Adherent,luminal,Metastatic,pleural_effusion,Female,Asterand,ERpos_HER2pos,,SUM52PE_BREAST,,,,,,MF-004-005,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001397,PT-Zep3T4,SUM225CWN,SUM225CWN,56.0,,,CVCL_5593,BRCANOS,Adult,Adherent,basal,Metastatic,breast,Female,Asterand,ERneg_HER2pos,,SUM225CWN_BREAST,,,,,,MF-004-005,None,BRCANOS,"Breast Invasive Cancer, NOS",Invasive Breast Carcinoma,Breast +ACH-001398,PT-Xr379n,SW 156,SW156,75.0,Commercial,SIDM01162,CVCL_1719,RCC,Adult,Adherent,,Primary,kidney,Male,ATCC,,CRL-2175,SW156_KIDNEY,1240220.0,,272.0,,,MF-021-002,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-001399,PT-V8yAFO,SW 626,SW626,46.0,Commercial,SIDM01168,CVCL_1725,COAD,Adult,Adherent,,Metastatic,ovary,Female,ATCC,,HTB-78,SW626_LARGE_INTESTINE,909753.0,,2038.0,,,MF-021-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001400,PT-2KkY6l,SW 954,SW954,86.0,Commercial,SIDM01157,CVCL_1732,VSC,Adult,Adherent,,Primary,cervix,Female,ATCC,,HTB-117,SW954_CERVIX,924247.0,,1182.0,,,MF-021-001,None,VSC,Squamous Cell Carcinoma of the Vulva/Vagina,Squamous Cell Carcinoma of the Vulva/Vagina,Vulva/Vagina +ACH-001401,PT-7a0mgm,SW-13,SW13,55.0,Commercial,SIDM00814,CVCL_0542,ACC,Adult,Adherent,,Primary,autonomic_ganglia,Female,ATCC,,CCL-105,SW13_ADRENAL_CORTEX,909744.0,,270.0,,,MF-021-001,None,ACC,Adrenocortical Carcinoma,Adrenocortical Carcinoma,Adrenal Gland +ACH-001402,PT-zjOA3C,SW756,SW756,46.0,Commercial,SIDM01174,CVCL_1727,CESC,Adult,Adherent,,Primary,cervix,Female,ATCC,,CRL-10302,SW756_CERVIX,724839.0,,1984.0,,,MF-021-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-001403,PT-tuE0iI,TO14,TO14,,Commercial,,CVCL_2734,SOC,Unknown,Adherent,,Metastatic,abdomen,Female,Sigma-Aldrich,,,TO14_OVARY,,,,,,MF-001-010,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001407,PT-SuuJak,UM-UC-13,UMUC13,,Commercial,,CVCL_2746,BLCA,Unknown,Adherent,,Metastatic,lymph_node,Male,Sigma-Aldrich,bladder_transitional_cell,8090508,UMUC13_URINARY_TRACT,,,,,,MF-015-002,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-001408,PT-uUFQYJ,UM-UC-14,UMUC14,,Commercial,,CVCL_2747,UCU,Unknown,Adherent,,Metastatic,urinary_tract,Male,Sigma-Aldrich,bladder_transitional_cell,,UMUC14_URINARY_TRACT,,,,,,MF-015-002,None,UCU,Urethral Urothelial Carcinoma,Urethral Cancer,Bladder/Urinary Tract +ACH-001409,PT-8JQP9N,UM-UC-16,UMUC16,,Commercial,,CVCL_2748,BLCA,Unknown,Adherent,,Primary,urinary_tract,Unknown,Sigma-Aldrich,bladder_transitional_cell,,UMUC16_URINARY_TRACT,,,,,,MF-015-002,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-001410,PT-xsmap4,UM-UC-4,UMUC4,,Commercial,,CVCL_2749,BLCA,Unknown,Adherent,,Metastatic,lymph_node,Female,Sigma-Aldrich,bladder_transitional_cell,,UMUC4_URINARY_TRACT,,,,,,MF-015-002,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-001411,PT-gYhX0x,UM-UC-5,UMUC5,,Commercial,,CVCL_2750,BLSC,Unknown,Adherent,,Primary,urinary_tract,Female,Sigma-Aldrich,bladder_squamous,8090502,UMUC5_URINARY_TRACT,,,,,,MF-015-002,None,BLSC,Bladder Squamous Cell Carcinoma,Bladder Squamous Cell Carcinoma,Bladder/Urinary Tract +ACH-001412,PT-IRdqMO,UM-UC-10,UMUC10,,Commercial,,CVCL_2744,BLCA,Unknown,Adherent,,Primary,urinary_tract,Male,Sigma-Aldrich,bladder_transitional_cell,8090506,UMUC10_URINARY_TRACT,,,,,,MF-015-002,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-001413,PT-Yc254j,UM-UC-11,UMUC11,,Commercial,,CVCL_2745,BLCA,Unknown,Adherent,,Primary,urinary_tract,Male,Sigma-Aldrich,bladder_transitional_cell,8090507,UMUC11_URINARY_TRACT,,,,,,MF-015-002,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-001414,PT-8XYADU,UM-UC-6,UMUC6,,Commercial,,CVCL_2751,BLCA,Unknown,Adherent,,Primary,urinary_tract,Male,Sigma-Aldrich,bladder_transitional_cell,8090503,UMUC6_URINARY_TRACT,,,,,,MF-015-002,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-001415,PT-gUUbZP,UM-UC7,UMUC7,,Commercial,,CVCL_2752,BLCA,Unknown,Adherent,,Primary,urinary_tract,Male,Sigma-Aldrich,bladder_transitional_cell,8090504,UMUC7_URINARY_TRACT,,,,,,MF-015-002,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-001416,PT-pf2odi,UM-UC9,UMUC9,,Commercial,,CVCL_2753,BLCA,Unknown,Adherent,,Primary,urinary_tract,Male,Sigma-Aldrich,bladder_transitional_cell,,UMUC9_URINARY_TRACT,,,,,,MF-015-002,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-001417,PT-MWTVtt,UMC-11,UMC11,,Commercial,SIDM01183,CVCL_1784,LUCA,Unknown,Adherent,,Primary,lung,Male,ATCC,,CRL-5975,UMC11_LUNG,909779.0,,1914.0,,,MF-001-001,None,LUCA,Lung Carcinoid,Lung Neuroendocrine Tumor,Lung +ACH-001418,PT-JGzDYG,UWB1.289,UWB1289,56.0,Commercial,SIDM00815,CVCL_B079,SOC,Adult,Adherent,,Primary,ovary,Female,ATCC,serous,CRL-2945,UWB1289_OVARY,1480374.0,,1596.0,,,MF-039-001,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001419,PT-vA9Pcv,VP229,VP229,47.0,Commercial,,CVCL_2754,IDC,Adult,Adherent,,Primary,breast,Female,Sigma-Aldrich,,,VP229_BREAST,,,,,,MF-017-001,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001421,PT-WBS2Hf,WERI-Rb-1,WERIRB1,1.0,Commercial,,CVCL_1792,RBL,Pediatric,Suspension,,Primary,eye,Female,ATCC,,HTB-169,WERIRB1_AUTONOMIC_GANGLIA,,,,,,MF-001-001,None,RBL,Retinoblastoma,Retinoblastoma,Eye +ACH-001422,PT-EhPRzn,WPE1-NA22,WPE1NA22,54.0,Commercial,,CVCL_3810,PRAD,Adult,Adherent,,Primary,prostate,Male,ATCC,,CRL-2849,WPE1NA22_PROSTATE,,,,,,MF-016-001,None,PRAD,Prostate Adenocarcinoma,Prostate Adenocarcinoma,Prostate +ACH-001430,PT-uuajSv,TC138,TC138,,Academic lab,,CVCL_4Z30,ES,Pediatric,Mixed,EWS_FLI,Primary,bone,Male,Kim Stegmaier (Broad),,,TC138_BONE,,,,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001431,PT-VGGhv1,TC205,TC205,,Academic lab,,CVCL_4Z31,ES,Pediatric,Adherent,EWS_FEV,Primary,bone,Unknown,Kim Stegmaier (Broad),,,TC205_BONE,,,,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-001433,PT-rJIZ1y,CCLF_PEDS_0008_T,CCLFPEDS0008T,17.0,CCLF,,CVCL_B3PM,EPIS,Pediatric,Adherent,,Metastatic,pleural_cavity,Female,,,,CCLFPEDS0008T_SOFT_TISSUE,,,,,Post-treatment,MF-018-001,None,EPIS,Epithelioid Sarcoma,Epithelioid Sarcoma,Soft Tissue +ACH-001441,PT-jIJ6sz,92-1,921,76.0,Commercial,,CVCL_8607,UM,Adult,Adherent,,Metastatic,uvea,Female,Sigma-Aldrich,,13012458,921_UVEA,,,,,,MF-001-003,None,UM,Uveal Melanoma,Ocular Melanoma,Eye +ACH-001442,PT-QwG6Ej,A388,A388,86.0,Commercial,SIDM00794,CVCL_1063,CSCC,Adult,Adherent,,Metastatic,lymph_node,Male,ATCC,,CRL-7905,A388_SKIN,910697.0,,948.0,,,MF-002-001,None,CSCC,Cutaneous Squamous Cell Carcinoma,Cutaneous Squamous Cell Carcinoma,Skin +ACH-001443,PT-xji0Xg,ASH-3,ASH3,68.0,Commercial,SIDM00491,CVCL_2856,THAP,Adult,Adherent,,Primary,thyroid,Female,JCRB,,JCRB1073,ASH3_THYROID,1290722.0,,891.0,,,MF-009-001,None,THAP,Anaplastic Thyroid Cancer,Anaplastic Thyroid Cancer,Thyroid +ACH-001450,PT-wk0KRr,BLUE-1,BLUE1,29.0,Commercial,,CVCL_1967,BL,Adult,Suspension,,Primary,bone_marrow,Male,DSMZ,b_cell_burkitt,ACC 594,BLUE1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001451,PT-gPKmS2,BOKU,BOKU,,Commercial,SIDM00073,CVCL_1089,CESC,Unknown,Adherent,,Primary,cervix,Female,JCRB,,IFO50323,BOKU_CERVIX,,,,,,MF-004-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-001452,PT-FQ3AFJ,BONNA-12,BONNA12,46.0,Commercial,SIDM00984,CVCL_1090,HCL,Adult,Suspension,,Metastatic,spleen,Male,DSMZ,,ACC 150,BONNA12_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906695.0,,196.0,,,MF-001-001,None,HCL,Hairy Cell Leukemia,Non-Hodgkin Lymphoma,Lymphoid +ACH-001453,PT-pIyNqk,BPH-1,BPH1,68.0,Commercial,SIDM00964,CVCL_1091,ZHYPP,Adult,Adherent,,Primary,prostate,Male,DSMZ,,,BPH1_PROSTATE,924105.0,,1223.0,,,MF-001-027,None,,"Hyperplasia, Prostate",Non-Cancerous,Prostate +ACH-001454,PT-LAy4cf,C10,C10,71.0,Commercial,,CVCL_5245,COAD,Adult,Adherent,,Primary,large_intestine,Male,ECACC,,,C10_LARGE_INTESTINE,,,,,,MF-005-002,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001456,PT-pBU2pM,C125PM,C125PM,,Commercial,,CVCL_8175,COADREAD,Unknown,Adherent,,Primary,large_intestine,Unknown,ECACC,,,C125PM_LARGE_INTESTINE,,,,,,MF-005-002,None,COADREAD,Colorectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001458,PT-gDrzwl,C75,C75,56.0,Commercial,,CVCL_5248,COAD,Adult,Adherent,,Primary,large_intestine,Male,ECACC,,12022907,C75_LARGE_INTESTINE,,,,,,MF-005-002,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001459,PT-4HbM7P,C80,C80,69.0,Commercial,,CVCL_5249,READ,Adult,Adherent,,Primary,large_intestine,Male,ECACC,,*Couldn't find on DSMZ,C80_LARGE_INTESTINE,,,,,,MF-005-002,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001460,PT-7da898,C84,C84,67.0,Commercial,,CVCL_5250,COAD,Adult,Mixed,,Primary,large_intestine,Male,ECACC,,,C84_LARGE_INTESTINE,,,,,,MF-005-002,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001461,PT-3wMRZS,C99,C99,69.0,Commercial,,CVCL_8176,READ,Adult,Adherent,,Primary,large_intestine,Male,ECACC,,,C99_LARGE_INTESTINE,,,,,,MF-005-002,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001481,PT-GWiky5,CHLA-90,CHLA90,8.0,,,CVCL_6610,NBL,Pediatric,Adherent,,Metastatic,autonomic_ganglia,Male,,,,CHLA90_AUTONOMIC_GANGLIA,,,,,,MF-005-005,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001484,PT-zwxgMM,CI,CI,47.0,Commercial,,CVCL_Y548,BLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,b_cell,,CI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001485,PT-zwxgMM,CII,CII,47.0,Commercial,,CVCL_0D73,BLL,Adult,Adherent,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,b_cell,,CII_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001489,PT-JQqnTw,COR-L32,CORL32,,Commercial,SIDM00508,CVCL_2413,LUSC,Unknown,Suspension,,Metastatic,bone_marrow,Unknown,Sigma-Aldrich,NSCLC_squamous,,CORL32_LUNG,1322212.0,,1168.0,,,MF-001-003,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-001490,PT-gDQhpO,COR-L321,CORL321,58.0,Commercial,SIDM00507,CVCL_2414,LUAD,Adult,Suspension,,Primary,lung,Female,Sigma-Aldrich,,,CORL321_LUNG,1322213.0,,1484.0,,,MF-001-003,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-001494,PT-KZb32w,EGI-1,EGI1,52.0,Commercial,SIDM01050,CVCL_1193,EHCH,Adult,Adherent,,Primary,biliary_tract,Male,DSMZ,extrahepatic,ACC 385,EGI1_BILIARY_TRACT,906853.0,,1315.0,,,MF-006-003,None,EHCH,Extrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001495,PT-bHINin,EMTOKA,EMTOKA,64.0,Commercial,,CVCL_E115,UCS,Adult,Adherent,,Primary,endometrium,Female,JCRB,,JCRB1601,EMTOKA_ENDOMETRIUM,,,,,,MF-001-001,None,UCS,Uterine Carcinosarcoma/Uterine Malignant Mixed Mullerian Tumor,Endometrial Carcinoma,Uterus +ACH-001496,PT-YHsN9r,ESO26,ESO26,56.0,Commercial,SIDM00539,CVCL_2035,GEJ,Adult,Mixed,,Primary,oesophagus,Male,Sigma-Aldrich,,,ESO26_OESOPHAGUS,1503366.0,,1680.0,,,MF-001-003,None,GEJ,Adenocarcinoma of the Gastroesophageal Junction,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-001497,PT-CNzzSN,ESO51,ESO51,74.0,Commercial,SIDM00538,CVCL_2036,ESCA,Adult,Suspension,,Primary,oesophagus,Male,Sigma-Aldrich,,,ESO51_OESOPHAGUS,1503367.0,,668.0,,,MF-001-003,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-001498,PT-5d2l7D,Farage,FARAGE,70.0,Commercial,SIDM00859,CVCL_3302,GCB,Adult,Suspension,,Metastatic,lymph_node,Female,ATCC,b_cell,CRL-2630,FARAGE_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1297449.0,,1772.0,,,MF-001-001,None,GCB,Germinal Center B-Cell Type,Non-Hodgkin Lymphoma,Lymphoid +ACH-001500,PT-JtOhdx,FLO-1,FLO1,68.0,Commercial,SIDM01041,CVCL_2045,ESCA,Adult,Adherent,,Primary,oesophagus,Male,Sigma-Aldrich,,11012001,FLO1_OESOPHAGUS,1503361.0,,1019.0,,,MF-002-003,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-001509,PT-jrbPZG,H357,H357,74.0,Commercial,,CVCL_2462,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,Sigma-Aldrich,tongue,6092004,H357_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-007-003,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001510,PT-8wgZXD,H376,H376,40.0,Commercial,,CVCL_2463,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Female,Sigma-Aldrich,oral,6092005,H376_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-007-003,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001511,PT-L1Obji,H413,H413,53.0,Commercial,,CVCL_2465,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Female,Sigma-Aldrich,buccal_mucosa,6092007,H413_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-007-003,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001513,PT-KwMOW6,HCA-1,HCA1,,Commercial,,CVCL_2916,ECAD,Unknown,Adherent,,Metastatic,cervix,Female,JCRB,endocervical,JCRB1153,HCA1_CERVIX,,,,,,MF-015-001,None,ECAD,Endocervical Adenocarcinoma,Cervical Adenocarcinoma,Cervix +ACH-001514,PT-RaBya0,HCC1008,HCC1008,67.0,Commercial,,CVCL_1244,IDC,Adult,Adherent,,Metastatic,lymph_node,Female,ATCC,ERpos_HER2pos,CRL-2320,HCC1008_BREAST,,,,,,MF-007-004,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001515,PT-4kA9Xl,HCS-2,HCS2,42.0,Commercial,,CVCL_2918,CESC,Adult,Adherent,,Metastatic,cervix,Female,JCRB,,JCRB1203,HCS2_CERVIX,,,,,,MF-015-007,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-001516,PT-q7epG7,HCSC-1,HCSC1,48.0,Commercial,,CVCL_2919,ECAD,Adult,Adherent,,Primary,ascites,Female,JCRB,endocervical,JCRB1205,HCSC1_CERVIX,,,,,,MF-015-001,None,ECAD,Endocervical Adenocarcinoma,Cervical Adenocarcinoma,Cervix +ACH-001517,PT-YZF57N,HEC-1,HEC1,71.0,Commercial,SIDM00596,CVCL_1274,UCEC,Adult,Adherent,,Primary,endometrium,Female,JCRB,,JCRB0042,HEC1_ENDOMETRIUM,907051.0,,474.0,,,MF-015-001,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-001518,PT-emUGGo,HEC-116,HEC116,,Commercial,,CVCL_2924,UCEC,Unknown,Adherent,,Primary,endometrium,Female,JCRB,,JCRB1124,HEC116_ENDOMETRIUM,,,,,,MF-015-007,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-001519,PT-Ra8US3,H-EMC-SS,HEMCSS,77.0,Commercial,SIDM00535,CVCL_1238,EMCHS,Adult,Adherent,,Primary,soft_tissue,Female,Sigma-Aldrich,,,HEMCSS_BONE,907290.0,,1921.0,,,MF-007-001,None,EMCHS,Extraskeletal Myxoid Chondrosarcoma,Chondrosarcoma,Bone +ACH-001520,PT-vloZI6,HG-3,HG3,70.0,Commercial,,CVCL_Y547,BLL,Adult,Adherent,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,,HG3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001521,PT-thO68X,HKA-1,HKA1,77.0,Commercial,,CVCL_2943,CSCC,Adult,Adherent,,Primary,skin,Female,JCRB,keratoacanthoma,JCRB1017,HKA1_SKIN,,,,,,MF-002-009,None,CSCC,Cutaneous Squamous Cell Carcinoma,Cutaneous Squamous Cell Carcinoma,Skin +ACH-001522,PT-wEoiUI,HMY-1,HMY1,62.0,Commercial,,CVCL_2950,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,JCRB,,JCRB1018,HMY1_SKIN,,,,,,MF-002-001,None,MEL,Melanoma,Melanoma,Skin +ACH-001523,PT-ae7zps,HSC-1,HSC1,75.0,Commercial,,CVCL_2807,CSCC,Adult,Adherent,,Primary,skin,Male,JCRB,,JCRB1015,HSC1_SKIN,,,,,,MF-002-009,None,CSCC,Cutaneous Squamous Cell Carcinoma,Cutaneous Squamous Cell Carcinoma,Skin +ACH-001524,PT-hQHCaO,HSC-5,HSC5,75.0,Commercial,,CVCL_0314,CSCC,Adult,Adherent,,Primary,skin,Male,JCRB,,JCRB1016,HSC5_SKIN,,,,,,MF-005-001,None,CSCC,Cutaneous Squamous Cell Carcinoma,Cutaneous Squamous Cell Carcinoma,Skin +ACH-001525,PT-GR4jOd,HT-3,HT3,58.0,Commercial,SIDM00679,CVCL_1293,CEAD,Adult,Adherent,,Metastatic,lymph_node,Female,ATCC,,HTB-32,HT3_CERVIX,907068.0,,1393.0,,,MF-023-001,None,CEAD,Cervical Adenocarcinoma,Cervical Adenocarcinoma,Cervix +ACH-001526,PT-JCLa8x,HuO9,HUO9,13.0,Commercial,SIDM00599,CVCL_1298,OS,Pediatric,Adherent,,Primary,bone,Female,JCRB,,JCRB0427,HUO9_BONE,907072.0,,330.0,,,MF-001-001,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-001528,PT-1Qm9m0,IHH-4,IHH4,75.0,Commercial,SIDM00600,CVCL_2960,THPA,Adult,Adherent,,Metastatic,lymph_node,Male,JCRB,papillary,JCRB1079,IHH4_THYROID,1240154.0,,331.0,,,MF-009-001,None,THPA,Papillary Thyroid Cancer,Well-Differentiated Thyroid Cancer,Thyroid +ACH-001529,PT-RI1Xeu,JAR,JAR,,Commercial,SIDM01039,CVCL_0360,UCCA,Fetus,Adherent,,Primary,Placenta,Male,ATCC,,HTB-144,JAR_PLACENTA,907175.0,,633.0,,,MF-001-001,None,UCCA,Choriocarcinoma,Gestational Trophoblastic Disease,Uterus +ACH-001530,PT-hB4ARO,JEG-3,JEG3,,Commercial,SIDM01218,CVCL_0363,UCCA,Fetus,Adherent,,Metastatic,central_nervous_system,Male,ATCC,,HTB-36,JEG3_PLACENTA,907176.0,,1195.0,,,MF-015-001,None,UCCA,Choriocarcinoma,Gestational Trophoblastic Disease,Uterus +ACH-001532,PT-IYnIVo,JMU-RTK-2,JMURTK2,0.0,Commercial,,CVCL_4W58,MRT,Pediatric,Adherent,,Metastatic,central_nervous_system,Male,JCRB,,JCRB1484,JMURTK2_SOFT_TISSUE,,Cell line thought to be female but has Y chromosome expression.,,,,MF-002-001,None,MRT,Rhabdoid Cancer,Rhabdoid Cancer,Kidney +ACH-001533,PT-04HLfu,KARPAS 1718,KARPAS1718,,Commercial,,CVCL_2539,SMZL,Unknown,Adherent,,Primary,haematopoietic_and_lymphoid_tissue,Male,Sigma-Aldrich,splenic_lymphoma,8072401,KARPAS1718_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-003,None,SMZL,Splenic Marginal Zone Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001536,PT-BemhJ7,KKU-100,KKU100,65.0,Commercial,,CVCL_3996,EHCH,Adult,Adherent,,Primary,liver,Female,JCRB,extrahepatic,JCRB1568,KKU100_BILIARY_TRACT,,,,,,MF-002-001,None,EHCH,Extrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001538,PT-LDOCPR,KKU-213,KKU213,58.0,Commercial,,CVCL_M261,IHCH,Adult,Adherent,,Primary,biliary_tract,Male,JCRB,intrahepatic,JCRB1557,KKU213_BILIARY_TRACT,,,,,,MF-002-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001539,PT-FzFmMI,KML-1,KML1,28.0,Commercial,,CVCL_2979,GCB,Adult,Suspension,,Primary,pleural_effusion,Female,JCRB,b_cell,JCRB1347,KML1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,GCB,Germinal Center B-Cell Type,Non-Hodgkin Lymphoma,Lymphoid +ACH-001540,PT-B1XqB8,KMLS-1,KMLS1,,Commercial,,CVCL_2980,LIPO,Unknown,Adherent,,Primary,soft_tissue,Unknown,JCRB,,JCRB0200,KMLS1_SOFT_TISSUE,,,,,,MF-002-001,None,LIPO,Liposarcoma,Liposarcoma,Soft Tissue +ACH-001541,PT-01q6LP,KMS-28PE,KMS28PE,77.0,Commercial,,CVCL_2995,PCM,Adult,Suspension,,Primary,pleural_effusion,Female,JCRB,,JCRB1191,KMS28PE_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,PCM,Plasma Cell Myeloma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001542,PT-wu5c1x,KON,KON,76.0,Commercial,SIDM00604,CVCL_3001,OCSC,Adult,Adherent,,Metastatic,upper_aerodigestive_tract,Male,JCRB,,JCRB0194,KON_UPPER_AERODIGESTIVE_TRACT,1298215.0,,314.0,,,MF-002-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001543,PT-1EAB3W,KOSC-2,KOSC2,51.0,Commercial,SIDM00603,CVCL_1337,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,JCRB,oral,JCRB0126.1,KOSC2CL343_UPPER_AERODIGESTIVE_TRACT,753570.0,,315.0,,,MF-001-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001544,PT-VFQOly,KYAE-1,KYAE1,60.0,,SIDM00530,CVCL_1825,ESCA,Adult,Adherent,,Metastatic,pleural_effusion,Male,,,,KYAE1_OESOPHAGUS,1503368.0,,1624.0,,,MF-011-001,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-001547,PT-xjKkQm,LO68,LO68,57.0,Commercial,,CVCL_2581,PLEMESO,Adult,Adherent,,Primary,pleural_effusion,Male,Sigma-Aldrich,,CBA-0141,LO68_LUNG,,,,,,MF-001-016,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-001548,PT-TA4RrC,LS,LS,1.0,Commercial,,CVCL_2105,NBL,Pediatric,Adherent,,Metastatic,autonomic_ganglia,Female,DSMZ,,ACC 675,LS_AUTONOMIC_GANGLIA,,,,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001549,PT-QtHHhA,Lu-135,LU135,69.0,Commercial,SIDM00294,CVCL_1389,SCLC,Adult,Suspension,,Primary,lung,Male,JCRB,,JCRB0170,LU135_LUNG,713899.0,,207.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-001550,PT-UFhSa8,MCC13,MCC13,80.0,Commercial,SIDM00007,CVCL_2583,MCC,Adult,Adherent,,Metastatic,lymph_node,Female,Sigma-Aldrich,,CBA-1338,MCC13_SKIN,,,,,,MF-001-017,None,MCC,Merkel Cell Carcinoma,Merkel Cell Carcinoma,Skin +ACH-001551,PT-kTtYJG,MCC14/2,MCC142,80.0,Commercial,,CVCL_2584,MCC,Adult,Adherent,,Metastatic,lymph_node,Male,Sigma-Aldrich,,CBA-1340,MCC142_SKIN,,,,,,MF-001-017,None,MCC,Merkel Cell Carcinoma,Merkel Cell Carcinoma,Skin +ACH-001552,PT-FEgBWK,MCC26,MCC26,82.0,Commercial,SIDM00006,CVCL_2585,MCC,Adult,Adherent,,Primary,skin,Female,Sigma-Aldrich,,CBA-1341,MCC26_SKIN,,,,,,MF-001-017,None,MCC,Merkel Cell Carcinoma,Merkel Cell Carcinoma,Skin +ACH-001554,PT-2AwIuw,mel-202,MEL202,,Commercial,,CVCL_C301,UM,Unknown,Adherent,,Primary,uvea,Female,ECACC,,,MEL202_UVEA,,,,,,MF-001-003,None,UM,Uveal Melanoma,Ocular Melanoma,Eye +ACH-001555,PT-1Sf7Sz,Mero-14,MERO14,60.0,Commercial,,CVCL_2590,PLEMESO,Adult,Adherent,,Primary,pleural_effusion,Male,Sigma-Aldrich,,,MERO14_PLEURA,,,,,,MF-004-003,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-001556,PT-go6neE,Mero-25,MERO25,60.0,Commercial,,CVCL_2591,PLBMESO,Adult,Adherent,,Primary,pleural_effusion,Male,Sigma-Aldrich,,,MERO25_PLEURA,,,,,,MF-004-003,None,PLBMESO,"Pleural Mesothelioma, Biphasic Type",Pleural Mesothelioma,Pleura +ACH-001557,PT-LIQ4kC,Mero-41,MERO41,60.0,Commercial,,CVCL_2592,PLEMESO,Adult,Adherent,,Primary,pleural_effusion,Male,Sigma-Aldrich,,,MERO41_PLEURA,,,,,,MF-004-003,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-001558,PT-WxXGiC,Mero-48a,MERO48A,,Commercial,,CVCL_2593,PLBMESO,Unknown,Adherent,,Primary,pleural_effusion,Male,Sigma-Aldrich,,,MERO48A_PLEURA,,,,,,MF-004-003,None,PLBMESO,"Pleural Mesothelioma, Biphasic Type",Pleural Mesothelioma,Pleura +ACH-001559,PT-KmK0MJ,Mero-82,MERO82,,Commercial,,CVCL_2594,PLEMESO,Unknown,Adherent,,Primary,pleural_effusion,Unknown,Sigma-Aldrich,,,MERO82_PLEURA,,,,,,MF-004-003,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-001560,PT-B0HUMd,Mero-83,MERO83,,Commercial,,CVCL_2595,PLBMESO,Unknown,Adherent,,Primary,pleural_effusion,Male,Sigma-Aldrich,,,MERO83_PLEURA,,,,,,MF-004-003,None,PLBMESO,"Pleural Mesothelioma, Biphasic Type",Pleural Mesothelioma,Pleura +ACH-001561,PT-Nc2afW,Mero-84,MERO84,,Commercial,,CVCL_2596,PLBMESO,Unknown,Adherent,,Primary,pleural_effusion,Male,Sigma-Aldrich,,,MERO84_PLEURA,,,,,,MF-004-003,None,PLBMESO,"Pleural Mesothelioma, Biphasic Type",Pleural Mesothelioma,Pleura +ACH-001562,PT-9C9m7Z,Mero-95,MERO95,,Commercial,,CVCL_2597,PLEMESO,Unknown,Adherent,,Primary,pleural_effusion,Male,Sigma-Aldrich,,,MERO95_PLEURA,,,,,,MF-004-003,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-001563,PT-uwdvUG,MM127,MM127,,Commercial,,CVCL_2601,MEL,Unknown,Adherent,,Metastatic,skin,Male,Sigma-Aldrich,amelanotic,CBA-1344,MM127_SKIN,,,,,,MF-001-004,None,MEL,Melanoma,Melanoma,Skin +ACH-001566,PT-4UAKiS,MM370,MM370,,Commercial,,CVCL_2605,MEL,Unknown,Adherent,,Metastatic,lymph_node,Male,Sigma-Aldrich,,CBA-1348,MM370_SKIN,,,,,,MF-001-004,None,MEL,Melanoma,Melanoma,Skin +ACH-001567,PT-fN0pV5,MM383,MM383,,Commercial,,CVCL_2606,MEL,Unknown,Adherent,,Metastatic,lymph_node,Male,Sigma-Aldrich,,CBA-1350,MM383_SKIN,,,,,,MF-001-004,None,MEL,Melanoma,Melanoma,Skin +ACH-001568,PT-QuhZbF,MM386,MM386,,Commercial,,CVCL_2607,MEL,Unknown,Adherent,,Metastatic,lymph_node,Male,Sigma-Aldrich,,CBA-1349,MM386_SKIN,,,,,,MF-001-004,None,MEL,Melanoma,Melanoma,Skin +ACH-001569,PT-XeUtGz,MM415,MM415,,Commercial,,CVCL_2608,MEL,Unknown,Adherent,,Metastatic,lymph_node,Male,Sigma-Aldrich,,CBA-1351,MM415_SKIN,,,,,,MF-001-004,None,MEL,Melanoma,Melanoma,Skin +ACH-001570,PT-bKFeuG,MM426,MM426,,Commercial,,CVCL_2609,MEL,Unknown,Adherent,,Metastatic,lymph_node,Male,Sigma-Aldrich,,CBA-1352,MM426_SKIN,,,,,,MF-001-004,None,MEL,Melanoma,Melanoma,Skin +ACH-001573,PT-AntDeX,MOLM-1,MOLM1,41.0,Commercial,,CVCL_2118,CMLBCRABL1,Adult,Suspension,,Metastatic,bone_marrow,Male,DSMZ,,,MOLM1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,CMLBCRABL1,"Chronic Myeloid Leukemia, BCR-ABL1+",Myeloproliferative Neoplasms,Myeloid +ACH-001574,PT-H3wdRq,MOLM-14,MOLM14,20.0,Commercial,SIDM00436,CVCL_7916,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,,ACC 777,MOLM14_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-020,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-001577,PT-wizE6v,MUTZ-8,MUTZ8,63.0,Commercial,,CVCL_2130,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,,,MUTZ8_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-003-002,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-001578,PT-OqrZ3f,NCCIT,NCCIT,24.0,Commercial,SIDM00655,CVCL_1451,EMBCA,Adult,Adherent,,Primary,lung,Male,ATCC,,CRL-2073,NCCIT_TESTIS,908441.0,,1098.0,,,MF-001-001,None,EMBCA,Embryonal Carcinoma,Non-Seminomatous Germ Cell Tumor,Testis +ACH-001591,PT-5DnFBw,NCI-H1417,NCIH1417,61.0,Commercial,SIDM00642,CVCL_1469,SCLC,Adult,Adherent,,Primary,lung,Female,ATCC,,CRL-5869,NCIH1417_LUNG,688001.0,,423.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-001599,PT-H6p5eD,NCI-H64,NCIH64,48.0,Commercial,SIDM01126,CVCL_1573,SCLC,Adult,Suspension,,Metastatic,lymph_node,Female,ATCC,,CRL-5976,NCIH64_LUNG,688026.0,,1371.0,,,MF-007-012,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-001603,PT-HjdUWT,NH-12,NH12,1.0,Commercial,SIDM00577,CVCL_1605,NBL,Pediatric,Adherent,,Primary,autonomic_ganglia,Male,JCRB,,JCRB0833,NH12_AUTONOMIC_GANGLIA,908447.0,,1546.0,,,MF-003-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001605,PT-5s2EZm,no.10,NO10,62.0,Commercial,SIDM00574,CVCL_3075,GB,Adult,Adherent,,Primary,central_nervous_system,Male,JCRB,glioblastoma,IFO50368,NO10_CENTRAL_NERVOUS_SYSTEM,908452.0,,36.0,,,MF-015-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001606,PT-jZhsXq,no.11,NO11,64.0,Commercial,SIDM00573,CVCL_3076,GB,Adult,Adherent,,Primary,central_nervous_system,Female,JCRB,glioblastoma,IFO50369,NO11_CENTRAL_NERVOUS_SYSTEM,908450.0,,1489.0,,,MF-015-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001607,PT-yeY4QM,NOZ,NOZ,48.0,Commercial,,CVCL_3079,GBAD,Adult,Adherent,,Metastatic,ascites,Female,JCRB,,JCRB1033,NOZ_LIVER,,,,,,MF-022-001,None,GBAD,"Gallbladder Adenocarcinoma, NOS",Intracholecystic Papillary Neoplasm,Biliary Tract +ACH-001608,PT-NaLtZ9,NP 2,NP2,63.0,Commercial,,CVCL_1R15,GB,Adult,Adherent,,Primary,central_nervous_system,Male,JCRB,glioblastoma,JCRB1566,NP2_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001609,PT-OT2kJe,NP 3,NP3,64.0,Commercial,,CVCL_1R16,GB,Adult,Adherent,,Primary,central_nervous_system,Male,JCRB,glioblastoma,JCRB1567,NP3_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001610,PT-WoVaBP,NP 5,NP5,27.0,Commercial,,CVCL_1R17,GB,Adult,Adherent,,Primary,central_nervous_system,Male,JCRB,glioblastoma,JCRB1569,NP5_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001611,PT-62G0ep,NP 8,NP8,38.0,Commercial,,CVCL_4W66,GB,Adult,Adherent,,Primary,central_nervous_system,Female,JCRB,glioblastoma,JCRB1608,NP8_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001613,PT-VzJIqw,OCI-AML4,OCIAML4,35.0,Commercial,,CVCL_5224,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,,,OCIAML4_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-003-002,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-001616,PT-oQqqCS,OCI-LY18,OCILY18,56.0,Commercial,,CVCL_1880,DLBCLNOS,Adult,Suspension,,Primary,pleural_effusion,Male,DSMZ,DLBCL,ACC 699,OCILY18_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-001617,PT-X6RNMT,OCI-LY7,OCILY7,48.0,Commercial,SIDM00459,CVCL_1881,DLBCLNOS,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,DLBCL,,OCILY7_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1659819.0,,1606.0,,,MF-005-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-001618,PT-Oev2PO,OCI-M2,OCIM2,56.0,Commercial,,CVCL_2150,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Unknown,DSMZ,,,OCIM2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-005-004,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-001619,PT-X8PfQy,OCUG-1,OCUG1,43.0,Commercial,,CVCL_3083,GBAD,Adult,Adherent,,Metastatic,ascites,Male,JCRB,,JCRB0191,OCUG1_BILIARY_TRACT,,,,,,MF-002-006,None,GBAD,"Gallbladder Adenocarcinoma, NOS",Intracholecystic Papillary Neoplasm,Biliary Tract +ACH-001622,PT-D5Ft7E,Onda 7,ONDA7,51.0,Commercial,,CVCL_4W67,GB,Adult,Adherent,,Primary,central_nervous_system,Male,JCRB,glioblastoma,JCRB1575,ONDA7_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001623,PT-QBDrgb,Onda 8,ONDA8,31.0,Commercial,,CVCL_4W68,GB,Adult,Adherent,,Primary,central_nervous_system,Female,JCRB,glioblastoma,JCRB1578,ONDA8_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001624,PT-dDtvIC,Onda 9,ONDA9,58.0,Commercial,,CVCL_1R14,GB,Adult,Adherent,,Primary,central_nervous_system,Male,JCRB,glioblastoma,JCRB1576,ONDA9_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-001625,PT-FeUEcM,OSC-19,OSC19,61.0,Commercial,SIDM00566,CVCL_3086,OCSC,Adult,Adherent,,Metastatic,lymph_node,Male,JCRB,,JCRB0198,OSC19_UPPER_AERODIGESTIVE_TRACT,1298362.0,,1253.0,,,MF-007-007,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001626,PT-CVPxmk,OSC-20,OSC20,59.0,Commercial,SIDM00565,CVCL_3087,OCSC,Adult,Adherent,,Metastatic,lymph_node,Female,JCRB,,JCRB0197,OSC20_UPPER_AERODIGESTIVE_TRACT,1240196.0,,1254.0,,,MF-007-007,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001627,PT-a2ltr5,P4E6,P4E6,,Commercial,,CVCL_2677,PRAD,Unknown,Adherent,,Primary,prostate,Male,Sigma-Aldrich,,,P4E6_PROSTATE,,,,,,MF-019-001,None,PRAD,Prostate Adenocarcinoma,Prostate Adenocarcinoma,Prostate +ACH-001628,PT-i3tIXN,PEA1,PEA1,,Commercial,,CVCL_2682,HGSOC,Unknown,Adherent,,Metastatic,pleural_effusion,Female,Sigma-Aldrich,,10032306,PEA1_OVARY,,,,,,MF-001-010,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001630,PT-FMp5RI,PEO1,PEO1,,Commercial,SIDM00472,CVCL_2686,SOC,Unknown,Adherent,,Metastatic,ascites,Female,Sigma-Aldrich,,,PEO1_OVARY,1480372.0,,177.0,,,MF-001-010,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001632,PT-FMp5RI,PEO4,PEO4,,Commercial,SIDM00471,CVCL_2690,SOC,Unknown,Adherent,,Metastatic,ascites,Female,Sigma-Aldrich,,,PEO4_OVARY,,,,,,MF-001-010,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001634,PT-cBta1E,PGA-1,PGA1,,Commercial,,CVCL_Y545,CLLSLL,Unknown,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,,PGA1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,CLLSLL,Chronic Lymphocytic Leukemia/Small Lymphocytic Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001636,PT-k9PrKk,Ramos,RAMOS,3.0,Commercial,SIDM01094,CVCL_0597,BL,Pediatric,Adherent,,Primary,ascites,Male,ATCC,b_cell_burkitt,,RAMOS_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001638,PT-l9J76R,RC-K8,RCK8,55.0,Commercial,SIDM00448,CVCL_1883,GCB,Adult,Adherent,,Primary,ascites,Male,DSMZ,b_cell,ACC 561,RCK8_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330995.0,,283.0,,,MF-001-017,None,GCB,Germinal Center B-Cell Type,Non-Hodgkin Lymphoma,Lymphoid +ACH-001639,PT-dlYxf2,ROS-50,ROS50,69.0,Commercial,SIDM00415,CVCL_1887,DLBCLNOS,Adult,Adherent,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,,ROS50_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331025.0,,1764.0,,,MF-001-017,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-001641,PT-4X1Phg,SAT,SAT,,Commercial,SIDM00350,CVCL_3160,HNSC,Unknown,Adherent,,Primary,upper_aerodigestive_tract,Unknown,JCRB,,JCRB1027,SAT_UPPER_AERODIGESTIVE_TRACT,1299050.0,,562.0,,,MF-001-001,None,HNSC,Head and Neck Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001642,PT-HcsCe7,SCC-3,SCC3,20.0,Commercial,SIDM00384,CVCL_1683,MBN,Adult,Suspension,,Primary,pleural_effusion,Female,JCRB,b_cell,JCRB0115,SCC3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910930.0,,1475.0,,,MF-001-001,None,MBN,Mature B-Cell Neoplasms,Non-Hodgkin Lymphoma,Lymphoid +ACH-001645,PT-pmeBkH,SEKI,SEKI,28.0,Commercial,,CVCL_3162,MEL,Adult,Suspension,,Primary,skin,Female,JCRB,,JCRB1041,SEKI_SKIN,,,,,,MF-001-020,None,MEL,Melanoma,Melanoma,Skin +ACH-001647,PT-8Jr4Fd,SHI-1,SHI1,37.0,Commercial,,CVCL_2191,AMOL,Adult,Suspension,,Metastatic,bone_marrow,Male,DSMZ,,,SHI1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-005-004,None,AMOL,Acute Monoblastic/Monocytic Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-001648,PT-F8MgcH,Shmac 4,SHMAC4,,Commercial,,CVCL_2722,PRAD,Unknown,Adherent,,Primary,prostate,Male,Sigma-Aldrich,,,SHMAC4_PROSTATE,,,,,,MF-019-001,None,PRAD,Prostate Adenocarcinoma,Prostate Adenocarcinoma,Prostate +ACH-001649,PT-iy858F,Shmac 5,SHMAC5,,Commercial,,CVCL_2723,PRAD,Unknown,Adherent,,Primary,prostate,Male,Sigma-Aldrich,,10112303,SHMAC5_PROSTATE,,,,,,MF-019-001,None,PRAD,Prostate Adenocarcinoma,Prostate Adenocarcinoma,Prostate +ACH-001650,PT-97kTPc,SISO,SISO,67.0,Commercial,SIDM00394,CVCL_2193,CEAD,Adult,Adherent,,Primary,cervix,Female,DSMZ,,ACC 327,SISO_CERVIX,1240212.0,,1498.0,,,MF-001-001,None,CEAD,Cervical Adenocarcinoma,Cervical Adenocarcinoma,Cervix +ACH-001651,PT-aKpEm3,SKG-I,SKGI,40.0,Commercial,,CVCL_2793,CESC,Adult,Adherent,,Primary,endometrium,Female,JCRB,,IFO50308,SKGI_ENDOMETRIUM,,,,,,MF-004-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-001652,PT-IwYShD,SKG-II,SKGII,50.0,Commercial,,CVCL_2794,CESC,Adult,Adherent,,Primary,endometrium,Female,JCRB,,IFO50309,SKGII_ENDOMETRIUM,,,,,,MF-004-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-001653,PT-ZJjbcp,SK-GT-2,SKGT2,72.0,Commercial,SIDM00393,CVCL_2194,STAD,Adult,Adherent,,Primary,stomach,Male,Sigma-Aldrich,,11012008,SKGT2_STOMACH,1503364.0,,1868.0,,,MF-001-003,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-001654,PT-2qao55,SK-GT-4,SKGT4,89.0,Commercial,SIDM00483,CVCL_2195,ESCA,Adult,Adherent,,Primary,oesophagus,Male,Sigma-Aldrich,,11012007,SKGT4_OESOPHAGUS,1503365.0,,2164.0,,,MF-001-003,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-001655,PT-yc0xLp,SKN,SKN,52.0,Commercial,SIDM00377,CVCL_3167,ULMS,Adult,Adherent,,Primary,endometrium,Female,JCRB,,JCRB0173,SKN_ENDOMETRIUM,1240215.0,,791.0,,,MF-004-001,None,ULMS,Uterine Leiomyosarcoma,Uterine Sarcoma/Mesenchymal,Uterus +ACH-001656,PT-YKJPHt,SKNO-1,SKNO1,22.0,Commercial,,CVCL_2196,AM,Adult,Suspension,,Metastatic,bone_marrow,Male,DSMZ via Pellman (DFCI),,*Couldn't find on Sigma-Aldrich,SKNO1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-008,None,AM,AML with Maturation,Acute Myeloid Leukemia,Myeloid +ACH-001664,PT-k5HJNy,SNU-638,SNU638,48.0,Commercial,,CVCL_0102,STAD,Adult,Adherent,,Metastatic,ascites,Male,KCLB,,638,SNU638_STOMACH,,,,,,MF-001-005,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-001668,PT-2w1URA,SUSA,SUSA,30.0,Commercial,,CVCL_L280,TT,Adult,Adherent,,Primary,Embryonal,Male,DSMZ,testicular,747,SUSA_TESTIS,,,,,,MF-001-020,None,TT,Teratoma,Non-Seminomatous Germ Cell Tumor,Testis +ACH-001669,PT-ffpEbF,TANOUE,TANOUE,11.0,Commercial,SIDM00288,CVCL_1852,BLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,ACC 399,TANOUE_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001670,PT-SJ98Vo,TASK1,TASK1,21.0,Commercial,SIDM00026,CVCL_3177,PNET,Adult,Suspension,,Primary,central_nervous_system,Female,JCRB,,JCRB0139,TASK1_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,PNET,Primitive Neuroectodermal Tumor,Embryonal Tumor,CNS/Brain +ACH-001673,PT-oSlXkO,TFK-1,TFK1,63.0,Commercial,,CVCL_2214,EHCH,Adult,Adherent,,Primary,biliary_tract,Male,DSMZ,extrahepatic,ACC 344,TFK1_BILIARY_TRACT,,,,,,MF-001-001,None,EHCH,Extrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001674,PT-o4jARg,TGW,TGW,1.0,Commercial,SIDM00324,CVCL_1771,NBL,Pediatric,Adherent,,Primary,autonomic_ganglia,Male,JCRB,,JCRB0618,TGW_AUTONOMIC_GANGLIA,910780.0,,1752.0,,,MF-015-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001675,PT-6uEn4i,TR146,TR146,67.0,Commercial,,CVCL_2736,OCSC,Adult,Suspension,,Primary,lymph_node,Female,Sigma-Aldrich,,,TR146_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-004-003,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001677,PT-PFlyLY,U-2904,U2904,59.0,Commercial,,CVCL_X504,DLBCLNOS,Adult,Suspension,,Primary,pleural_effusion,Male,DSMZ,b_cell,ACC 768,U2904_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-001680,PT-05hA76,U-698-M,U698M,7.0,Commercial,SIDM00424,CVCL_0017,BLL,Pediatric,Suspension,,Metastatic,upper_aerodigestive_tract,Male,DSMZ,lymphoblastic_lymphoma,,U698M_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909777.0,,548.0,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001685,PT-A1mKo8,U-HO1,UHO1,23.0,Commercial,,CVCL_2220,HL,Adult,Suspension,,Primary,pleural_effusion,Male,DSMZ,,,UHO1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-012-001,None,HL,Hodgkin Lymphoma,Hodgkin Lymphoma,Lymphoid +ACH-001687,PT-V3AbhR,UM-RC-3,UMRC3,,Commercial,,CVCL_2740,CCRCC,Unknown,Adherent,,Primary,kidney,Unknown,Sigma-Aldrich,,8090512,UMRC3_KIDNEY,,,,,,MF-015-002,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-001688,PT-tocbjR,UM-RC-7,UMRC7,,Commercial,,CVCL_2742,RCC,Unknown,Adherent,,Primary,kidney,Male,Sigma-Aldrich,,8090514,UMRC7_KIDNEY,,,,,,MF-015-002,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-001690,PT-uLUnir,UPCI-SCC-026,UPCISCC026,82.0,Commercial,,CVCL_2221,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Female,DSMZ,,,UPCISCC026_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-006-005,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001691,PT-km3C7x,UPCI-SCC-029A,UPCISCC029A,84.0,Commercial,,CVCL_1855,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,DSMZ,,,UPCISCC029A_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-006-005,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001692,PT-pvMW8r,UPCI-SCC-040,UPCISCC040,50.0,Commercial,,CVCL_2222,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,DSMZ,,,UPCISCC040_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-006-002,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001694,PT-GgnlK1,UPCI-SCC-074,UPCISCC074,51.0,Commercial,,CVCL_2224,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Female,DSMZ,,,UPCISCC074_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-006-002,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001696,PT-YWwuRp,UPCI-SCC-111,UPCISCC111,69.0,Commercial,,CVCL_2226,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Female,DSMZ,,ACC 666,UPCISCC111_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-006-005,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001698,PT-sxiEGA,UPCI-SCC-116,UPCISCC116,57.0,Commercial,,CVCL_2228,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,DSMZ,,ACC 663,UPCISCC116_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-006-002,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001699,PT-uhmv08,UPCI-SCC-131,UPCISCC131,73.0,Commercial,,CVCL_2229,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,DSMZ,,668,UPCISCC131_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-006-002,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001701,PT-CvPqts,UPCI-SCC-200,UPCISCC200,74.0,Commercial,,CVCL_2232,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,DSMZ,,672,UPCISCC200_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-006-005,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-001702,PT-vslXtO,VA-ES-BJ,VAESBJ,41.0,Commercial,SIDM01179,CVCL_1785,EPIS,Adult,Adherent,,Metastatic,bone_marrow,Male,ATCC,,CRL-2138,VAESBJ_SOFT_TISSUE,688121.0,,1004.0,,,MF-002-002,None,EPIS,Epithelioid Sarcoma,Epithelioid Sarcoma,Soft Tissue +ACH-001703,PT-jXERAO,VAL,VAL,50.0,Commercial,SIDM00416,CVCL_1819,DLBCLNOS,Adult,Suspension,,Metastatic,bone_marrow,Female,DSMZ,DLBCL,ACC 586,VAL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331048.0,,2221.0,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-001704,PT-KL4Kmo,VMRC-MELG,VMRCMELG,,Commercial,SIDM00319,CVCL_1789,MEL,Unknown,Adherent,,Primary,Colon,Male,JCRB,,JCRB0074,VMRCMELG_SKIN,930301.0,,158.0,,,MF-015-004,None,MEL,Melanoma,Melanoma,Skin +ACH-001707,PT-XqTlID,WA-OSEL,WAOSEL,,Commercial,,CVCL_Y549,CLLSLL,Unknown,Adherent,,Primary,haematopoietic_and_lymphoid_tissue,Male,DSMZ,b_cell,ACC 767,WAOSEL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,CLLSLL,Chronic Lymphocytic Leukemia/Small Lymphocytic Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001709,PT-scpPOF,WSU-NHL,WSUNHL,48.0,Commercial,SIDM00412,CVCL_1793,DLBCLNOS,Adult,Mixed,,Primary,pleural_effusion,Female,DSMZ,b_cell,,WSUNHL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909785.0,,601.0,,,MF-001-001,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-001711,PT-lzKK9W,PFSK-1,PFSK1,1.0,Commercial,SIDM01132,CVCL_1642,PNET,Pediatric,Adherent,,Primary,central_nervous_system,Male,ATCC,,CRL-2060,PFSK1_CENTRAL_NERVOUS_SYSTEM,683667.0,,1682.0,,,MF-001-001,None,PNET,Primitive Neuroectodermal Tumor,Embryonal Tumor,CNS/Brain +ACH-001712,PT-O6FqYe,Hs 860.T,HS860T,22.0,Academic lab,,CVCL_0957,OS,Adult,Adherent,,Primary,bone,Male,Kim Stegmaier (Broad),,,HS860T_BONE,,,,,,MF-002-001,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-001715,PT-fcGStb,CAL-72,CAL72,10.0,Commercial,SIDM00930,CVCL_1113,OS,Pediatric,Adherent,,Primary,bone,Male,DSMZ,,ACC 439,CAL72_BONE,906827.0,,550.0,,,MF-002-005,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-001716,PT-v9NPqN,GOTO,GOTO,1.0,Commercial,SIDM00544,CVCL_1234,NBL,Pediatric,Adherent,,Primary,Adrenal Gland,Male,JCRB,,JCRB0612,GOTO_AUTONOMIC_GANGLIA,906875.0,,1009.0,,Unknown,MF-041-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-001719,PT-l7kiMr,OCI-C4P,OCIC4P,,Academic lab,,CVCL_DH05,CCOV,Unknown,Adherent,,Primary,ovary,Female,(University of Miami),clear_cell,,OCIC4P_OVARY,,,,,,MF-035-001,None,CCOV,Clear Cell Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001735,PT-IjgcRg,SEMK2,SEMK2,5.0,Academic lab,,CVCL_S906,BLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,Pikman (DFCI),b_cell,,SEMK2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001736,PT-PmkoYV,HB1119,HB1119,,Academic lab,,CVCL_8227,BLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Unknown,Pikman (DFCI),b_cell,,HB1119_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001737,PT-qdQICQ,CTV-1-DM,CTV1DM,,Academic lab,,CVCL_1150,ATLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,Kim Stegmaier (Broad),t_cell,,CTV1DM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,ATLL,Adult T-Cell Leukemia/Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-001738,PT-1wfNxx,CCRF-CEM,CCRFCEM,3.0,Commercial,SIDM00121,CVCL_0207,TLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,t_cell,,CCRFCEM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,905952.0,Previously received from Kim Stegmaier Lab DFCI,1151.0,,,MF-001-001,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001740,PT-vvfjiZ,RH28,RH28,17.0,Academic lab,,CVCL_8752,ARMS,Pediatric,Adherent,,Metastatic,lymph_node,Male,Schaefer (University of Zurich),alveolar,,RH28_SOFT_TISSUE,,,,,,MF-002-001,None,ARMS,Alveolar Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-001743,PT-PIWzVv,RC2,RC2,3.0,Academic lab,,CVCL_L510,ARMS,Pediatric,Adherent,PAX3_FKHR,Metastatic,soft_tissue,Male,Schaefer (University of Zurich),,,RC2_SOFT_TISSUE,,,,,,MF-002-001,None,ARMS,Alveolar Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-001745,PT-s7RWi4,RhJT,RHJT,,Academic lab,,CVCL_VU81,ARMS,Pediatric,Adherent,,,soft_tissue,Male,Schaefer (University of Zurich),alveolar,,RHJT_SOFT_TISSUE,,,,,,MF-002-001,None,ARMS,Alveolar Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-001750,PT-Hk36HO,TTC442,TTC442,10.0,Academic lab,,CVCL_B255,ERMS,Pediatric,Adherent,,,soft_tissue,Male,Schaefer (University of Zurich),embryonal,,TTC442_SOFT_TISSUE,,,,,,MF-001-017,None,ERMS,Embryonal Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-001751,PT-dYlXmf,Rh36,RH36,15.0,Academic lab,,CVCL_M599,ERMS,Pediatric,Adherent,,,soft_tissue,Male,Schaefer (University of Zurich),embryonal,,RH36_SOFT_TISSUE,,,,,,MF-002-001,None,ERMS,Embryonal Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-001765,PT-BN67ox,Rh4,RH4,7.0,Academic lab,,CVCL_5916,ARMS,Pediatric,Adherent,,Metastatic,liver,Female,"(Hospital for Sick Children, Toronto)",alveolar,,RH4_SOFT_TISSUE,,,,,,MF-002-001,None,ARMS,Alveolar Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-001767,PT-v13Wpd,CCLF_PEDS_0018_T,CCLFPEDS0018T,,CCLF,,CVCL_B3PP,ZFIBSOF,Pediatric,Adherent,,,fibroblast,Male,,alveolar,,CCLFPEDS0018T_SOFT_TISSUE,,,,,,,None,,"Fibroblast, Soft Tissue",Non-Cancerous,Fibroblast +ACH-001786,PT-LbUj3S,SNU-1544,SNU1544,38.0,Commercial,,CVCL_5027,COAD,Adult,Adherent,,Primary,large_intestine,Female,KCLB,,1544,SNU1544_LARGE_INTESTINE,,,,,,MF-001-005,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001791,PT-lRwItD,LPS6,LPS6,,Academic lab,,CVCL_A1VR,LIPO,Unknown,Adherent,,,soft_tissue,Unknown,Sicinska (?),,,LPS6_SOFT_TISSUE,,,,,,MF-007-002,None,LIPO,Liposarcoma,Liposarcoma,Soft Tissue +ACH-001793,PT-TTxLCZ,LPS27,LPS27,,Academic lab,,CVCL_A1VQ,LIPO,Unknown,Adherent,,,soft_tissue,Unknown,Sicinska (?),,,LPS27_SOFT_TISSUE,,,,,,MF-007-002,None,LIPO,Liposarcoma,Liposarcoma,Soft Tissue +ACH-001794,PT-jDDO2a,93T449,93T449,68.0,Academic lab,,CVCL_U614,WDLS,Adult,Adherent,,Primary,soft_tissue,Female,Pedeutour (?),WDLPS,,93T449_SOFT_TISSUE,,,,,,MF-001-001,None,WDLS,Well-Differentiated Liposarcoma,Liposarcoma,Soft Tissue +ACH-001795,PT-jDDO2a,94T778,94T778,69.0,Academic lab,,CVCL_U613,WDLS,Adult,Adherent,,,soft_tissue,Female,Pedeutour (?),WDLPS,,94T778_SOFT_TISSUE,,,,,,MF-001-001,None,WDLS,Well-Differentiated Liposarcoma,Liposarcoma,Soft Tissue +ACH-001796,PT-7RM5sK,95T1000,95T1000,48.0,Academic lab,,CVCL_WU67,WDLS,Adult,Adherent,,,soft_tissue,Male,Pedeutour (?),WDLPS,,95T1000_SOFT_TISSUE,,,,,,MF-001-001,None,WDLS,Well-Differentiated Liposarcoma,Liposarcoma,Soft Tissue +ACH-001799,PT-VjYY7b,LPS141,LPS141,,Academic lab,,CVCL_M823,DDLS,Unknown,Adherent,,,soft_tissue,Male,Marino-Enriquez (BWH),DDLPS,,LPS141_SOFT_TISSUE,,,,,,MF-001-018,None,DDLS,Dedifferentiated Liposarcoma,Liposarcoma,Soft Tissue +ACH-001802,PT-JmLeEs,LPS853,LPS853,,Academic lab,,CVCL_V415,DDLS,Unknown,Adherent,,,soft_tissue,Unknown,Marino-Enriquez (BWH),DDLPS,,LPS853_SOFT_TISSUE,,,,,,MF-004-003,None,DDLS,Dedifferentiated Liposarcoma,Liposarcoma,Soft Tissue +ACH-001804,PT-0lPf2W,LPS510,LPS510,,Academic lab,,CVCL_V414,DDLS,Unknown,Suspension,,,soft_tissue,Unknown,Marino-Enriquez (BWH),WD_DDPLS,,LPS510_SOFT_TISSUE,,,,,,MF-004-003,None,DDLS,Dedifferentiated Liposarcoma,Liposarcoma,Soft Tissue +ACH-001807,PT-cIt896,LPS067,LPS067,,Academic lab,,CVCL_A1UY,DDLS,Unknown,Adherent,,Primary,soft_tissue,Male,Marino-Enriquez (BWH),DDLPS,,LPS067_SOFT_TISSUE,,,,,,MF-004-003,None,DDLS,Dedifferentiated Liposarcoma,Liposarcoma,Soft Tissue +ACH-001814,PT-2XpRTn,OS252,OS252,,Academic lab,,CVCL_WU66,OS,Pediatric,Adherent,,Primary,bone,Male,Richard Gorlick (Montefiore Medical Center),,,OS252_BONE,,,,,,MF-015-008,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-001818,PT-NPU9bj,C396,C396,,Academic lab,,CVCL_A1UX,OS,Unknown,Adherent,,Metastatic,bone,Male,Gorlick (Montefiore Medical Center),,,C396_BONE,,,,,,MF-015-008,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-001819,PT-FVLPZS,MFM-223,MFM223,,Commercial,SIDM00332,CVCL_1408,IDC,Adult,Adherent,luminal,Metastatic,pleural_effusion,Female,DSMZ,ERneg_HER2neg,,MFM223_BREAST,,,,,,MF-006-004,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-001820,PT-UXPdpL,COLO 824,COLO824,52.0,Commercial,SIDM00954,CVCL_1136,BNNOS,Adult,Adherent,,Metastatic,pleural_effusion,Female,DSMZ,,,COLO824_BREAST,,,,,,MF-001-017,None,BNNOS,"Breast Neoplasm, NOS","Breast Neoplasm, NOS",Breast +ACH-001825,PT-IPboWn,SW527,SW527,51.0,,,CVCL_3799,COAD,Adult,Adherent,,Metastatic,lymph_node,Male,,,,SW527_LARGE_INTESTINE,,"This line is a SW-480, SW-620 derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.",,,,MF-002-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-001827,PT-FHXDQt,184B5,184B5,21.0,,,CVCL_4688,ZIMMBR,Adult,Adherent,,Primary,breast,Female,,,,184B5_BREAST,,,,,,MF-017-003,None,,Immortalized Breast Cells,Non-Cancerous,Breast +ACH-001834,PT-EXxLVu,ICC10,ICC10,,Academic lab,,CVCL_A1VB,IHCH,Unknown,Adherent,,Primary,biliary_tract,Unknown,Bardeesy (MGH),intrahepatic,,ICC10_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001835,PT-EXxLVu,ICC10-6,ICC106,,Academic lab,,CVCL_A1UZ,IHCH,Unknown,Adherent,,Primary,biliary_tract,Unknown,Bardeesy (MGH),intrahepatic,,ICC106_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001836,PT-EXxLVu,ICC10-8,ICC108,,Academic lab,,CVCL_A1VA,IHCH,Unknown,Adherent,,Primary,biliary_tract,Unknown,Bardeesy (MGH),intrahepatic,,ICC108_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001838,PT-cRrqep,ICC12,ICC12,,Academic lab,,CVCL_A1VC,IHCH,Unknown,Adherent,,Primary,biliary_tract,Unknown,Bardeesy (MGH),intrahepatic,,ICC12_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001839,PT-oAAItB,ICC13-7,ICC137,,Academic lab,,CVCL_A1VD,IHCH,Unknown,Adherent,,Primary,biliary_tract,Unknown,Bardeesy (MGH),intrahepatic,,ICC137_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001841,PT-wNrZ5J,ICC15,ICC15,,Academic lab,,CVCL_A1VE,IHCH,Unknown,Adherent,,Primary,biliary_tract,Male,Bardeesy (MGH),extrahepatic,,ICC15_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001842,PT-QTHAca,ICC2,ICC2,66.0,Academic lab,,CVCL_VV27,IHCH,Adult,Adherent,,Primary,biliary_tract,Female,Bardeesy (MGH),intrahepatic,,ICC2_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001843,PT-c6a9E7,ICC3,ICC3,,Academic lab,,CVCL_A1ZB,IHCH,Unknown,Adherent,,Primary,biliary_tract,Unknown,Bardeesy (MGH),intrahepatic,,ICC3_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001844,PT-fiox7O,ICC4,ICC4,,Academic lab,,CVCL_A1VI,IHCH,Unknown,Adherent,,Primary,biliary_tract,Male,Bardeesy (MGH),intrahepatic,,ICC4_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001845,PT-ugXTLv,ICC5,ICC5,73.0,Academic lab,,CVCL_VV28,IHCH,Adult,Adherent,,Primary,biliary_tract,Male,Bardeesy (MGH),intrahepatic,,ICC5_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001846,PT-iphgaq,ICC6,ICC6,,Academic lab,,CVCL_A1VF,IHCH,Unknown,Adherent,,Primary,biliary_tract,Unknown,Bardeesy (MGH),intrahepatic,,ICC6_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001848,PT-PUXC1Q,ICC8,ICC8,,Academic lab,,CVCL_A1VG,IHCH,Unknown,Adherent,,Primary,biliary_tract,Male,Bardeesy (MGH),intrahepatic,,ICC8_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001849,PT-mD4L5a,ICC9,ICC9,,Academic lab,,CVCL_A1VH,IHCH,Unknown,Adherent,,Primary,biliary_tract,Unknown,Bardeesy (MGH),intrahepatic,,ICC9_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001850,PT-rx5EvX,G415,G415,68.0,Commercial,,CVCL_8198,GBAD,Adult,Adherent,,Metastatic,ascites,Male,RIKEN via academic lab,,RCB2640,G415_BILIARY_TRACT,,,,,,MF-001-001,None,GBAD,"Gallbladder Adenocarcinoma, NOS",Intracholecystic Papillary Neoplasm,Biliary Tract +ACH-001852,PT-eIYOff,HKGZ-CC,HKGZCC,76.0,Academic lab,,CVCL_E329,IHCH,Adult,Adherent,,Primary,biliary_tract,Male,Bardeesy (MGH),intrahepatic,,HKGZCC_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001853,PT-0MsFyj,KMCH-1,KMCH1,52.0,Academic lab,,CVCL_7970,HCCIHCH,Adult,Adherent,,Primary,biliary_tract,Male,Bardeesy (MGH),intrahepatic,,KMCH1_BILIARY_TRACT,,,,,,MF-001-001,None,HCCIHCH,Hepatocellular Carcinoma plus Intrahepatic Cholangiocarcinoma,Hepatocellular Carcinoma plus Intrahepatic Cholangiocarcinoma,Liver +ACH-001856,PT-E0gpbj,RBE,RBE,64.0,Academic lab,,CVCL_4896,IHCH,Adult,Adherent,,Primary,biliary_tract,Female,Bardeesy (MGH),intrahepatic,,RBE_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001857,PT-Sv5Y9u,SG231,SG231,42.0,Academic lab,,CVCL_0519,IHCH,Adult,Adherent,,Primary,biliary_tract,Male,Bardeesy (MGH),intrahepatic,,SG231_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001858,PT-hoMjwu,SSP-25,SSP25,61.0,Academic lab,SIDM00275,CVCL_4902,IHCH,Adult,Adherent,,Primary,biliary_tract,Female,Bardeesy (MGH),intrahepatic,,SSP25_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001861,PT-5pDw3E,TGBC1TKB,TGBC1TKB,,Academic lab,SIDM00252,CVCL_1769,GBC,Unknown,Adherent,,Metastatic,lymph_node,Female,Bardeesy (MGH),,,TGBC1TKB_BILIARY_TRACT,,,,,,MF-001-001,None,GBC,Gallbladder Cancer,Intracholecystic Papillary Neoplasm,Biliary Tract +ACH-001862,PT-6N8kTd,TGBC52TKB,TGBC52TKB,52.0,Academic lab,,CVCL_H695,AMPCA,Adult,Adherent,,,lymph_node,Male,Bardeesy (MGH),extrahepatic,,TGBC52TKB_BILIARY_TRACT,,,,,,MF-001-001,None,AMPCA,Ampullary Carcinoma,Ampullary Carcinoma,Ampulla of Vater +ACH-001863,PT-VWXKPj,TKKK,TKKK,,Academic lab,,CVCL_5599,IHCH,Unknown,Adherent,,Primary,biliary_tract,Male,Bardeesy (MGH),intrahepatic,,TKKK_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001864,PT-mhrkCC,YSCCC,YSCCC,70.0,Academic lab,,CVCL_3629,IHCH,Adult,Adherent,,Metastatic,ascites,Female,Bardeesy (MGH),intrahepatic,RCB1549,YSCCC_BILIARY_TRACT,,,,,Unknown,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001958,PT-osNzyX,MS1,MS1,54.0,Academic lab,SIDM00245,CVCL_1429,SCLC,Adult,Suspension,,Metastatic,lung,Male,Sanger,,,MS1_LUNG,,,,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-001959,PT-x2cqmS,CC-LP-1,CCLP1,48.0,Academic lab,,CVCL_0205,IHCH,Adult,Adherent,,Primary,biliary_tract,Male,Bardeesy (MGH),intrahepatic,,CCLP1_BILIARY_TRACT,,Cell line thought to be female but has Y chromsome expression.,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001960,PT-9dwZW4,CC-SW-1,CCSW1,55.0,Academic lab,,CVCL_A429,IHCH,Adult,Adherent,,Primary,biliary_tract,Female,Bardeesy (MGH),intrahepatic,,CCSW1_BILIARY_TRACT,,,,,,MF-001-001,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001961,PT-v333Dc,GB2,GB2,65.0,Academic lab,,CVCL_6899,GBAD,Adult,Adherent,,Metastatic,biliary_tract,Male,Bardeesy (MGH),,,GB2_BILIARY_TRACT,,,,,,MF-001-001,None,GBAD,"Gallbladder Adenocarcinoma, NOS",Intracholecystic Papillary Neoplasm,Biliary Tract +ACH-001970,PT-75oSJn,MM253,MM253,46.0,Commercial,,CVCL_2604,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,CellBank Australia,,CBA-1347,MM253_SKIN,,,,,,MF-001-004,None,MEL,Melanoma,Melanoma,Skin +ACH-001973,PT-oJTeSY,MM485,MM485,,Commercial,,CVCL_2610,MEL,Unknown,Adherent,,Metastatic,lymph_node,Male,CellBank Australia,,CBA-1355,MM485_SKIN,,,,,,MF-001-004,None,MEL,Melanoma,Melanoma,Skin +ACH-001977,PT-YF5RFe,NO36,NO36,,Commercial,,CVCL_2658,PLEMESO,Adult,Adherent,,Primary,pleural_effusion,Male,CellBank Australia,,CBA-0142,NO36_LUNG,,,,,,MF-001-014,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-001982,PT-6BEu4D,NZM3,NZM3,69.0,Commercial,,CVCL_D828,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,CellBank Australia,,,NZM3_SKIN,,,,,,MF-003-003,None,MEL,Melanoma,Melanoma,Skin +ACH-001986,PT-EpCvHQ,NZM42,NZM42,71.0,Commercial,,CVCL_D833,MEL,Adult,Adherent,,Metastatic,skin,Male,CellBank Australia,,,NZM42_SKIN,,,,,,MF-003-003,None,MEL,Melanoma,Melanoma,Skin +ACH-001990,PT-PCXcZ8,NZM7,NZM7,36.0,Commercial,,CVCL_D843,MEL,Adult,Adherent,,Metastatic,lymph_node,Male,CellBank Australia,,,NZM7_SKIN,,,,,,MF-003-003,None,MEL,Melanoma,Melanoma,Skin +ACH-001991,PT-WTNLuu,NZOV9,NZOV9,47.0,Commercial,,CVCL_LJ73,EOV,Adult,Mixed,,Primary,ovary,Female,CellBank Australia,endometrioid,*Couldn't find link to CellBank Australia,NZOV9_OVARY,,,,,,MF-003-003,None,EOV,Endometrioid Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-001992,PT-nrQ0Fm,ONE58,ONE58,58.0,Commercial,,CVCL_2671,PLEMESO,Adult,Adherent,,Primary,pleural_effusion,Male,CellBank Australia,,CBA-0143,ONE58_LUNG,,,,,,MF-001-014,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-001993,PT-22pOAT,NALM-16,NALM16,12.0,Commercial,,CVCL_1834,BLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,DSMZ,b_cell,,NALM16_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-001997,PT-jmmNcQ,ECC2,ECC2,,Academic lab,,CVCL_A1UI,EHCH,Unknown,Adherent,,Primary,biliary_tract,Male,Bardeesy (MGH),extrahepatic,,ECC2_BILIARY_TRACT,,,,,,MF-001-001,None,EHCH,Extrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-001999,PT-pmGuZF,950-5-BIK,9505BIK,,Academic lab,,CVCL_A1UH,PAAD,Unknown,Adherent,,Primary,pancreas,Male,Bardeesy (MGH),exocrine_adenocarcinoma,,9505BIK_PANCREAS,,,,,,MF-007-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-002001,PT-3FxmoJ,A375 SKIN CJ1,A375SKINCJ1,54.0,Academic lab,,CVCL_A1VP,MEL,Adult,Adherent,,Primary,skin,Female,Cory Johannessen (Broad),,,A375_SKIN_CJ1_RESISTANT,,Drug resistance: Dabrafenib and Trametinib,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-002002,PT-3FxmoJ,A375 SKIN CJ2,A375SKINCJ2,54.0,Academic lab,,,MEL,Adult,Adherent,,Primary,skin,Female,Cory Johannessen (Broad),,,A375_SKIN_CJ2_RESISTANT,,Drug resistance: SCH772984,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-002003,PT-3FxmoJ,A375 SKIN CJ3,A375SKINCJ3,54.0,Academic lab,,CVCL_B3PJ,MEL,Adult,Adherent,,Primary,skin,Female,Cory Johannessen (Broad),,,A375_SKIN_CJ3_RESISTANT,,Drug resistance: Dabrafenib and Trametinib,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-002004,PT-Zu8A8i,UACC62 SKIN CJ1,UACC62SKINCJ1,,Academic lab,,CVCL_A1VN,MEL,Unknown,Adherent,,Primary,skin,Unknown,Cory Johannessen (Broad),,,UACC62_SKIN_CJ1_RESISTANT,,Drug resistance: Dabrafenib and Trametinib,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-002005,PT-4QtR2m,SK-MEL-19,SKMEL19,50.0,Academic lab,,CVCL_6025,SKCM,Adult,Adherent,,Primary,skin,Male,Cory Johannessen (Broad),,,SKMEL19_SKIN,,,,,,MF-001-001,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-002011,PT-OP8ALo,MP46,MP46,69.0,Commercial,,CVCL_4D13,UM,Adult,Adherent,,Primary,uvea,Male,ATCC,,,MP46_UVEA,,,,,,MF-001-030,None,UM,Uveal Melanoma,Ocular Melanoma,Eye +ACH-002014,PT-5vJu3k,Mel270,MEL270,62.0,Academic lab,,CVCL_C302,UM,Adult,Adherent,,Primary,uvea,Male,,,,MEL270_UVEA,,,,,,MF-001-022,None,UM,Uveal Melanoma,Ocular Melanoma,Eye +ACH-002015,PT-N7xRpa,Mel285,MEL285,49.0,Academic lab,,CVCL_C303,UM,Adult,Adherent,,Primary,uvea,Female,(Leiden University),,,MEL285_UVEA,,,,,,MF-001-022,None,UM,Uveal Melanoma,Ocular Melanoma,Eye +ACH-002016,PT-MucJf6,Mel290,MEL290,67.0,Academic lab,,CVCL_C304,UM,Adult,Adherent,,Primary,uvea,Female,(Leiden University),,,MEL290_UVEA,,,,,,MF-001-022,None,UM,Uveal Melanoma,Ocular Melanoma,Eye +ACH-002017,PT-aDprgI,Omm1,OMM1,74.0,Academic lab,,CVCL_6939,UM,Adult,Adherent,,Metastatic,skin,Male,(Leiden University),,,OMM1_UVEA,,,,,,MF-001-022,None,UM,Uveal Melanoma,Ocular Melanoma,Eye +ACH-002018,PT-5vJu3k,Omm2.5,OMM25,62.0,Academic lab,,CVCL_C307,UM,Adult,Adherent,,Metastatic,liver,Male,,,,OMM25_UVEA,,,,,,MF-001-022,None,UM,Uveal Melanoma,Ocular Melanoma,Eye +ACH-002019,PT-AOzYCt,HOKUG,HOKUG,53.0,Commercial,,CVCL_8705,CEGCC,Adult,Adherent,,Primary,cervix,Female,RIKEN,,RCB0657,HOKUG_CERVIX,,,,,,MF-004-002,None,CEGCC,Glassy Cell Carcinoma of the Cervix,Glassy Cell Carcinoma of the Cervix,Cervix +ACH-002020,PT-3SrUkP,SKG-IIIa,SKGIIIA,38.0,Commercial,SIDM00381,CVCL_1704,CESC,Adult,Adherent,,Primary,cervix,Female,RIKEN,,RCB1892,SKGIIIA_CERVIX,,,,,,MF-004-001,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-002021,PT-UGz23U,T3M-3,T3M3,,Commercial,,CVCL_8065,UCCA,Unknown,Adherent,,Primary,Placenta,Female,RIKEN,,RCB1018,T3M3_PLACENTA,,,,,,MF-004-001,None,UCCA,Choriocarcinoma,Gestational Trophoblastic Disease,Uterus +ACH-002023,PT-hlvUsv,TGBC18TKB,TGBC18TKB,79.0,Commercial,,CVCL_3338,AMPCA,Adult,Adherent,,Primary,large_intestine,Female,RIKEN,papillotubular,RCB1169,TGBC18TKB_LARGE_INTESTINE,,,,,,MF-002-008,None,AMPCA,Ampullary Carcinoma,Ampullary Carcinoma,Ampulla of Vater +ACH-002024,PT-2Stxl0,ECC4,ECC4,45.0,Commercial,SIDM00069,CVCL_1190,READ,Adult,Adherent,,Primary,large_intestine,Male,RIKEN,,RCB0982,ECC4_LARGE_INTESTINE,,,,,,MF-001-001,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-002025,PT-mIVrGc,TT1TKB,TT1TKB,,Commercial,,CVCL_8764,READ,Unknown,Adherent,,Primary,large_intestine,Male,RIKEN,,RCB1185,TT1TKB_LARGE_INTESTINE,,,,,,MF-002-001,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-002026,PT-cgXnS7,HHUA,HHUA,54.0,Commercial,,CVCL_3866,UCEC,Adult,Adherent,,Primary,endometrium,Female,RIKEN,,RCB0658,HHUA_ENDOMETRIUM,,,,,,MF-004-002,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-002027,PT-vIwQtl,HOUA-I,HOUAI,55.0,Commercial,,CVCL_3867,UCEC,Adult,Adherent,,Primary,endometrium,Female,RIKEN,,RCB0659,HOUAI_ENDOMETRIUM,,,,,,MF-004-002,None,UCEC,Endometrial Carcinoma,Endometrial Carcinoma,Uterus +ACH-002029,PT-rJXazG,SAS,SAS,69.0,Commercial,SIDM00351,CVCL_1675,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Female,RIKEN,tongue,RCB1974,SAS_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-001-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002035,PT-5NWbnb,LCAM1,LCAM1,53.0,Commercial,,CVCL_E062,NSCLCPD,Adult,Adherent,,Primary,lung,Male,RIKEN,,RCB1425,LCAM1_LUNG,,,,,,MF-001-006,None,NSCLCPD,Poorly Differentiated Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-002038,PT-BC5ORj,HSKTC,HSKTC,46.0,Commercial,,CVCL_8234,OOVC,Adult,Adherent,,Primary,ovary,Female,RIKEN,,RCB0515,HSKTC_OVARY,,,,,,MF-004-002,None,OOVC,"Ovarian Cancer, Other","Ovarian Cancer, Other",Ovary/Fallopian Tube +ACH-002039,PT-mXNlfw,PK-8,PK8,,Commercial,,CVCL_4718,PAAD,Unknown,Adherent,,Metastatic,liver,Unknown,RIKEN,exocrine_adenocarcinoma,RCB2700,PK8_PANCREAS,,,,,,MF-001-001,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-002040,PT-YbtlK5,HMV-II,HMVII,65.0,Commercial,SIDM00291,CVCL_1282,VMM,Adult,Adherent,,Primary,skin,Female,RIKEN,,,HMVII_SKIN,,,,,,MF-004-001,None,VMM,Mucosal Melanoma of the Vulva/Vagina,Mucosal Melanoma of the Vulva/Vagina,Vulva/Vagina +ACH-002041,PT-PqWEZm,HOTHC,HOTHC,80.0,Commercial,,CVCL_8708,THAP,Adult,Adherent,,Primary,thyroid,Female,RIKEN,,RCB0662,HOTHC_THYROID,,,,,,MF-004-002,None,THAP,Anaplastic Thyroid Cancer,Anaplastic Thyroid Cancer,Thyroid +ACH-002042,PT-vhf9cn,T3M-5,T3M5,71.0,Commercial,,CVCL_8064,HNSC,Adult,Adherent,,Primary,thyroid,Female,RIKEN,,RCB1012,T3M5_THYROID,,,,,,MF-004-001,None,HNSC,Head and Neck Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002043,PT-gB4Jfi,Ca9-22,CA922,43.0,Commercial,SIDM00489,CVCL_1102,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,RIKEN,gingival,RCB1976,CA922_UPPER_AERODIGESTIVE_TRACT,,Depmap has correct JCRB stock,,,,MF-006-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002044,PT-v9ccBc,HSQ-89,HSQ89,74.0,Commercial,,CVCL_7674,SNSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,RIKEN,sinus,RCB0789,HSQ89_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-002-001,None,SNSC,Sinonasal Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002045,PT-a3mx1w,HO-1-u-1,HO1U1,72.0,Commercial,SIDM00591,CVCL_2784,OCSC,Adult,Adherent,,Primary,upper_aerodigestive_tract,Male,RIKEN,oral,RCB2102,HO1U1_UPPER_AERODIGESTIVE_TRACT,,,,,,MF-001-001,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002046,PT-SKC9qY,HTMMT,HTMMT,66.0,Commercial,,CVCL_8721,UCS,Adult,Adherent,,Primary,endometrium,Female,RIKEN,,RCB0660,HTMMT_ENDOMETRIUM,,,,,,MF-004-002,None,UCS,Uterine Carcinosarcoma/Uterine Malignant Mixed Mullerian Tumor,Endometrial Carcinoma,Uterus +ACH-002048,PT-oslMHT,RMS-YM,RMSYM,2.0,Commercial,,CVCL_A792,ERMS,Pediatric,Adherent,,Metastatic,soft_tissue,Male,RIKEN,embryonal,RCB1695,RMSYM_SOFT_TISSUE,,,,,,MF-001-009,None,ERMS,Embryonal Rhabdomyosarcoma,Rhabdomyosarcoma,Soft Tissue +ACH-002051,PT-K31XId,Lu-134-A,LU134A,80.0,Commercial,SIDM00296,CVCL_1387,SCLC,Adult,Suspension,,Primary,lung,Male,RIKEN,,RCB0466,LU134A_LUNG,,,,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002052,PT-0531Uw,Lu-139,LU139,63.0,Commercial,SIDM00293,CVCL_1390,SCLC,Adult,Suspension,,Primary,lung,Male,RIKEN,,RCB0469,LU139_LUNG,,,,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002055,PT-tk6NTJ,TL-1,TL1,10.0,Commercial,,CVCL_B371,BL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,RIKEN,b_cell_burkitt,RCB1871,TL1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002058,PT-J5FdFW,ATN-1,ATN1,47.0,Commercial,SIDM00233,CVCL_1073,ATLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,RIKEN,t_cell,RCB1440,ATN1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-002,None,ATLL,Adult T-Cell Leukemia/Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002059,PT-reOMOW,P30/OHK,P30OHK,11.0,Commercial,SIDM00364,CVCL_1631,BLL,Pediatric,Suspension,,Primary,bone_marrow,Female,RIKEN,b_cell,RCB1938,P30OHK_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-002061,PT-y8u0p3,P2UR/K-562,P2URK562,53.0,Commercial,,CVCL_L434,CMLBCRABL1,Adult,Suspension,,Primary,pleural_effusion,Female,RIKEN,,RCB1197,P2URK562_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-002-008,None,CMLBCRABL1,"Chronic Myeloid Leukemia, BCR-ABL1+",Myeloproliferative Neoplasms,Myeloid +ACH-002062,PT-2hETfh,SLVL,SLVL,70.0,Commercial,SIDM00374,CVCL_3169,SMZL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,RIKEN,b_cell,RCB1702,SLVL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,SMZL,Splenic Marginal Zone Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002065,PT-KE06kr,HS-PSS,HSPSS,,Commercial,,CVCL_8717,MPNST,Unknown,Adherent,,Metastatic,prostate,Male,RIKEN,,RCB2362,HSPSS_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,MPNST,Malignant Peripheral Nerve Sheath Tumor,Nerve Sheath Tumor,Peripheral Nervous System +ACH-002066,PT-coZfvw,HS-Sch-2,HSSCH2,54.0,Commercial,,CVCL_8718,MPNST,Adult,Adherent,,Primary,central_nervous_system,Female,RIKEN,,RCB2230,HSSCH2_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-002-001,None,MPNST,Malignant Peripheral Nerve Sheath Tumor,Nerve Sheath Tumor,Peripheral Nervous System +ACH-002067,PT-EcVEYs,NOS-1,NOS1,16.0,Commercial,SIDM00242,CVCL_1610,OS,Pediatric,Adherent,,Primary,bone,Male,RIKEN,,RCB1032,NOS1_BONE,,,,,,MF-001-001,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-002069,PT-3pqp8N,HS-Os-1,HSOS1,11.0,Commercial,,CVCL_8716,OS,Pediatric,Adherent,,Primary,bone,Female,RIKEN,,,HSOS1_BONE,,,,,,MF-002-001,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-002070,PT-kM7sLu,HKBMM,HKBMM,52.0,Commercial,,CVCL_8162,MNG,Adult,Adherent,,Primary,central_nervous_system,Female,RIKEN,,RCB0680,HKBMM_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-004-002,None,MNG,Meningioma,Meningothelial Tumor,CNS/Brain +ACH-002077,PT-qVbV4Q,Lu-165,LU165,50.0,Commercial,SIDM00292,CVCL_1391,SCLC,Adult,Suspension,,Metastatic,lymph_node,Male,RIKEN,,RCB1184,LU165_LUNG,,,,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002080,PT-rlExpa,TN-2,TN2,,Commercial,,CVCL_5602,NBL,Unknown,Adherent,,Primary,autonomic_ganglia,Male,RIKEN,adrenal,RCB1896,TN2_AUTONOMIC_GANGLIA,,,,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002083,PT-NBxXXr,NB69,NB69,1.0,Commercial,SIDM00244,CVCL_1448,NBL,Pediatric,Adherent,,Primary,autonomic_ganglia,Male,RIKEN,,RCB0480,NB69_AUTONOMIC_GANGLIA,,,,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002084,PT-Qsi22o,MMAc,MMAC,39.0,Commercial,SIDM00246,CVCL_5951,MEL,Adult,Adherent,,Metastatic,ascites,Female,RIKEN,,RCB0808,MMAC_SKIN,,,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-002085,PT-QWZuVb,HS-SY-II,HSSYII,,Commercial,,CVCL_8719,SYNS,Pediatric,Adherent,,Metastatic,lung,Male,RIKEN,,RCB2231,HSSYII_LUNG,,,,,,MF-001-017,None,SYNS,Synovial Sarcoma,Synovial Sarcoma,Soft Tissue +ACH-002089,PT-w6y5uu,201T,201T,68.0,Academic lab,SIDM00055,CVCL_X481,LUAD,Adult,Unknown,,Primary,lung,Male,Sanger,NSCLC_adenocarcinoma,,201T_LUNG,1287381.0,,220.0,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-002090,PT-ySk3os,BB65-RCC,BB65RCC,,Academic lab,SIDM00191,CVCL_1078,RCC,Unknown,Unknown,,Primary,kidney,Male,Sanger,,,BB65RCC_KIDNEY,753533.0,,181.0,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002091,PT-dvvVBK,CAL-39,CAL39,76.0,Academic lab,SIDM00935,CVCL_1109,VSC,Adult,Adherent,,,cervix,Female,Sanger,,,CAL39_VULVA,924107.0,,998.0,,,,None,VSC,Squamous Cell Carcinoma of the Vulva/Vagina,Squamous Cell Carcinoma of the Vulva/Vagina,Vulva/Vagina +ACH-002092,PT-LvJLfb,CHSA0011,CHSA0011,,Academic lab,SIDM00051,CVCL_X483,CHS,Unknown,Unknown,,Primary,bone,Male,Sanger,,,CHSA0011_BONE,1290767.0,,1466.0,,,,None,CHS,Chondrosarcoma,Chondrosarcoma,Bone +ACH-002093,PT-6A4Uap,CHSA0108,CHSA0108,,Academic lab,SIDM00050,CVCL_X484,CHS,Unknown,Unknown,,Primary,bone,Male,Sanger,,,CHSA0108_BONE,1290768.0,,280.0,,,,None,CHS,Chondrosarcoma,Chondrosarcoma,Bone +ACH-002094,PT-7BhS74,CHSA8926,CHSA8926,,Academic lab,SIDM00176,CVCL_X485,CHS,Unknown,Unknown,,Primary,bone,Male,Sanger,,,CHSA8926_BONE,1303912.0,,554.0,,,,None,CHS,Chondrosarcoma,Chondrosarcoma,Bone +ACH-002095,PT-toN1tP,COR-L303,CORL303,,Academic lab,SIDM00510,CVCL_2411,SCLC,Unknown,Suspension,,Primary,lung,Female,Sanger,,,CORL303_LUNG,1297438.0,,1942.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002096,PT-eNOXVI,CP50-MEL-B,CP50MELB,,Academic lab,SIDM00175,CVCL_1143,MEL,Unknown,Unknown,,Primary,skin,Male,Sanger,,,CP50MELB_SKIN,753545.0,,1248.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002097,PT-4V4zXY,CP66-MEL,CP66MEL,,Academic lab,SIDM00190,CVCL_1144,MEL,Unknown,Unknown,,Primary,skin,Male,Sanger,,,CP66MEL_SKIN,753546.0,,1845.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002098,PT-3Vy9bq,CP67-MEL,CP67MEL,,Academic lab,SIDM00189,CVCL_1145,MEL,Unknown,Unknown,,Primary,skin,Unknown,Sanger,,,CP67MEL_SKIN,949092.0,,640.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002099,PT-QryVtu,CS1,CS1,62.0,Academic lab,SIDM00199,CVCL_T023,CHS,Adult,Adherent,,Primary,bone,Male,Sanger,,,CS1_BONE,1290795.0,,1006.0,,,,None,CHS,Chondrosarcoma,Chondrosarcoma,Bone +ACH-002100,PT-wu5yKY,DJM-1,DJM1,87.0,Academic lab,SIDM00281,CVCL_1172,CSCC,Adult,Adherent,,Primary,skin,Female,Sanger,,,DJM1_SKIN,906841.0,,899.0,,,,None,CSCC,Cutaneous Squamous Cell Carcinoma,Cutaneous Squamous Cell Carcinoma,Skin +ACH-002101,PT-L9zIfE,EMC-BAC-1,EMCBAC1,,Academic lab,SIDM00048,CVCL_X486,NSCLC,Unknown,Unknown,,Primary,lung,Male,Sanger,,,EMCBAC1_LUNG,1503369.0,,967.0,,,,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-002102,PT-fbtwet,EMC-BAC-2,EMCBAC2,,Academic lab,SIDM00047,CVCL_X487,NSCLC,Unknown,Unknown,,Primary,lung,Unknown,Sanger,,,EMCBAC2_LUNG,1503370.0,,2232.0,,,,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-002103,PT-xla95J,ES1,ES1,5.0,Academic lab,SIDM00266,CVCL_1198,ES,Pediatric,Unknown,,Primary,bone,Female,Sanger,,,ES1_BONE,949158.0,,1564.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002104,PT-D3o8va,ES3,ES3,12.0,Academic lab,SIDM00265,CVCL_1199,ES,Pediatric,Unknown,,Primary,bone,Male,Sanger,,,ES3_BONE,684055.0,,1342.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002105,PT-xlEt4m,ES4,ES4,18.0,Academic lab,SIDM00264,CVCL_1200,ES,Adult,Unknown,,Primary,bone,Male,Sanger,,,ES4_BONE,949156.0,,70.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002106,PT-r9iOGQ,ES5,ES5,16.0,Academic lab,SIDM00263,CVCL_1201,ES,Pediatric,Unknown,,Primary,bone,Male,Sanger,,,ES5_BONE,684057.0,,610.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002107,PT-TqRNEw,ES6,ES6,17.0,Academic lab,SIDM00262,CVCL_1202,ES,Pediatric,Unknown,,Primary,bone,Male,Sanger,,,ES6_BONE,949157.0,,611.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002108,PT-UaCQ5a,ES7,ES7,15.0,Academic lab,SIDM00269,CVCL_1203,ES,Pediatric,Unknown,,Primary,bone,Male,Sanger,,,ES7_BONE,684059.0,,71.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002109,PT-XwatVo,ES8,ES8,10.0,Academic lab,SIDM00261,CVCL_1204,ES,Pediatric,Unknown,,Primary,bone,Male,Sanger,,,ES8_BONE,949155.0,,2139.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002110,PT-Og2kQl,EW-1,EW1,19.0,Academic lab,SIDM00205,CVCL_1208,ES,Adult,Unknown,,Metastatic,pleural_effusion,Male,Sanger,,,EW1_BONE,949163.0,,902.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002111,PT-ffWqWi,EW-11,EW11,11.0,Academic lab,SIDM00203,CVCL_1209,ES,Pediatric,Unknown,,Metastatic,lymph_node,Female,Sanger,,,EW11_BONE,684062.0,,231.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002112,PT-f4Zzeo,EW-12,EW12,,Academic lab,SIDM00200,CVCL_1210,ES,Unknown,Unknown,,Primary,bone,Female,Sanger,,,EW12_BONE,949162.0,,2140.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002113,PT-WFDXpM,EW-13,EW13,,Academic lab,SIDM00621,CVCL_1211,ES,Unknown,Unknown,,Primary,bone,Male,Sanger,,,EW13_BONE,949166.0,,324.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002114,PT-QzFJZa,EW-16,EW16,,Academic lab,SIDM00198,CVCL_1212,ES,Unknown,Unknown,,Primary,bone,Male,Sanger,,,EW16_BONE,949165.0,,1529.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002115,PT-vwk5jp,EW-18,EW18,,Academic lab,SIDM00197,CVCL_1213,ES,Unknown,Unknown,,Primary,bone,Unknown,Sanger,,,EW18_BONE,949164.0,,612.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002116,PT-WT7T9s,EW-22,EW22,,Academic lab,SIDM00196,CVCL_1214,ES,Unknown,Unknown,,Primary,bone,Unknown,Sanger,,,EW22_BONE,949167.0,,613.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002117,PT-vHz5HE,EW-24,EW24,,Academic lab,SIDM00195,CVCL_1215,ES,Unknown,Unknown,,Primary,bone,Unknown,Sanger,,,EW24_BONE,949168.0,,704.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002118,PT-tIaT2F,EW-3,EW3,14.0,Academic lab,SIDM00202,CVCL_1216,ES,Pediatric,Unknown,,Metastatic,pleural_effusion,Male,Sanger,,,EW3_BONE,949161.0,,2176.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002119,PT-G4z5vv,EW-7,EW7,20.0,Academic lab,SIDM00201,CVCL_1217,ES,Adult,Unknown,,Metastatic,pleural_effusion,Female,Sanger,,,EW7_BONE,949160.0,,72.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002120,PT-dBVaTX,GAK,GAK,86.0,Academic lab,SIDM00543,CVCL_1225,VMM,Adult,Adherent,,Metastatic,lymph_node,Female,Sanger,,,GAK_SKIN,910932.0,,325.0,,,,None,VMM,Mucosal Melanoma of the Vulva/Vagina,Mucosal Melanoma of the Vulva/Vagina,Vulva/Vagina +ACH-002121,PT-qSfHSE,G-MEL,GMEL,,Academic lab,SIDM00129,CVCL_W798,SKCM,Unknown,Unknown,,Primary,skin,Male,Sanger,,,GMEL_SKIN,1240130.0,,1981.0,,,,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-002122,PT-9jciof,GT3TKB,GT3TKB,,Academic lab,SIDM01231,CVCL_1237,LUSC,Unknown,Adherent,,Metastatic,pleural_effusion,Unknown,Sanger,NSCLC_squamous,,GT3TKB_STOMACH,907041.0,SNP fingerprinting confirms that this line is a RERF-LC-A1 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,614.0,,,,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-002123,PT-koaN9h,H2369,H2369,,Academic lab,SIDM00104,CVCL_A532,PLMESO,Unknown,Unknown,,Primary,lung,Male,Sanger,,,H2369_PLEURA,1290808.0,,165.0,,,,None,PLMESO,Pleural Mesothelioma,Pleural Mesothelioma,Pleura +ACH-002124,PT-bQkyHj,H2373,H2373,,Academic lab,SIDM00103,CVCL_A533,PLSMESO,Adult,Unknown,,Primary,lung,Male,Sanger,,,NCIH2373_PLEURA,1290809.0,,1797.0,,,,None,PLSMESO,"Pleural Mesothelioma, Sarcomatoid Type",Pleural Mesothelioma,Pleura +ACH-002125,PT-p43gwj,H2461,H2461,,Academic lab,SIDM00102,CVCL_A536,PLEMESO,Adult,Unknown,,Primary,lung,Male,Sanger,,,NCIH2461_PLEURA,1290810.0,,1508.0,,,,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-002126,PT-B8hYEZ,H2591,H2591,,Academic lab,SIDM00101,CVCL_A543,PLEMESO,Adult,Unknown,,Primary,lung,Male,Sanger,,,NCIH2591_PLEURA,1240131.0,,1509.0,,,,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-002127,PT-N8El5S,H2595,H2595,,Academic lab,SIDM00100,CVCL_A545,PLEMESO,Adult,Unknown,,Primary,lung,Male,Sanger,,,NCIH2595_PLEURA,1240132.0,,51.0,,,,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-002128,PT-4uXSQu,H2722,H2722,,Academic lab,SIDM00099,CVCL_U994,PLMESO,Unknown,Unknown,,Primary,lung,Male,Sanger,,,NCIH2722_PLEURA,1290812.0,,1798.0,,,,None,PLMESO,Pleural Mesothelioma,Pleural Mesothelioma,Pleura +ACH-002129,PT-f40mh1,H2731,H2731,,Academic lab,SIDM00098,CVCL_U995,PLSMESO,Unknown,Unknown,,Primary,lung,Male,Sanger,,,NCIH2731_PLEURA,1240134.0,,1074.0,,,,None,PLSMESO,"Pleural Mesothelioma, Sarcomatoid Type",Pleural Mesothelioma,Pleura +ACH-002130,PT-opHstS,H2795,H2795,,Academic lab,SIDM00154,CVCL_U996,PLEMESO,Unknown,Unknown,,Primary,lung,Male,Sanger,,,NCIH2795_PLEURA,1290813.0,,1971.0,,,,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-002131,PT-WguAEO,H2803,H2803,,Academic lab,SIDM00309,CVCL_U997,PLMESO,Unknown,Unknown,,Primary,lung,Unknown,Sanger,,,NCIH2803_PLEURA,1240135.0,,52.0,,,,None,PLMESO,Pleural Mesothelioma,Pleural Mesothelioma,Pleura +ACH-002132,PT-Rw7MY6,H2804,H2804,,Academic lab,SIDM00310,CVCL_U998,PLMESO,Unknown,Unknown,,Primary,lung,Male,Sanger,,,NCIH2804_PLEURA,1240136.0,,882.0,,,,None,PLMESO,Pleural Mesothelioma,Pleural Mesothelioma,Pleura +ACH-002133,PT-sgR3ZT,H2810,H2810,,Academic lab,SIDM00311,CVCL_U999,PLEMESO,Unknown,Unknown,,Primary,lung,Male,Sanger,,,NCIH2810_PLEURA,1240137.0,,591.0,,,,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-002134,PT-iPnxFl,H2818,H2818,,Academic lab,SIDM00520,CVCL_V000,PLEMESO,Unknown,Unknown,,Primary,lung,Male,Sanger,,,NCIH2818_PLEURA,1290814.0,,2254.0,,,,None,PLEMESO,"Pleural Mesothelioma, Epithelioid Type",Pleural Mesothelioma,Pleura +ACH-002135,PT-agzskj,H2869,H2869,,Academic lab,SIDM00519,CVCL_V001,PLBMESO,Unknown,Unknown,,Primary,lung,Male,Sanger,,,NCIH2869_PLEURA,1240138.0,,309.0,,,,None,PLBMESO,"Pleural Mesothelioma, Biphasic Type",Pleural Mesothelioma,Pleura +ACH-002136,PT-QUwL3P,H290,H290,,Academic lab,SIDM00518,CVCL_A555,PLMESO,Unknown,Unknown,,Primary,lung,Male,Sanger,,,H290_PLEURA,1240139.0,,742.0,,,,None,PLMESO,Pleural Mesothelioma,Pleural Mesothelioma,Pleura +ACH-002138,PT-3z38Jf,H513,H513,61.0,Academic lab,SIDM00114,CVCL_A570,LUAS,Adult,Unknown,,Metastatic,Unknown,Male,Sanger,NSCLC_adenosquamous,,H513_LUNG,1240141.0,This line is a NCI-H125 derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,2125.0,,,,None,LUAS,Lung Adenosquamous Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-002139,PT-ISixNE,HA7-RCC,HA7RCC,,Academic lab,SIDM00188,CVCL_1241,RCC,Unknown,Unknown,,Primary,kidney,Male,Sanger,,,HA7RCC_KIDNEY,753558.0,,1790.0,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002140,PT-0hMOxQ,Hey,HEY,,Academic lab,SIDM00968,CVCL_0297,HGSOC,Unknown,Adherent,,Primary,ovary,Female,Sanger,high_grade_serous,,HEY_OVARY,1479988.0,,1096.0,,,,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-002141,PT-AjNeCf,HSC-39,HSC39,54.0,Academic lab,SIDM00045,CVCL_A385,SSRCC,Adult,Unknown,,Metastatic,ascites,Male,Sanger,signet_ring_cell,,HSC39_STOMACH,1322224.0,,1991.0,,,,None,SSRCC,Signet Ring Cell Carcinoma of the Stomach,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002142,PT-3yhqod,HuO-3N1,HUO3N1,15.0,Commercial,SIDM00584,CVCL_1297,OS,Pediatric,Adherent,,Primary,bone,Female,JCRB,,JCRB0413,HUO3N1_BONE,909977.0,"Animal- human; Tissue - osteosarcoma; Profile - osteosarcoma, ilium",2101.0,,,,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-002143,PT-tN5qtW,IST-MEL1,ISTMEL1,,Academic lab,SIDM00225,CVCL_1308,MEL,Adult,Adherent,,Primary,skin,Male,Sanger,,,ISTMEL1_SKIN,907172.0,,1501.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002144,PT-WD7J2O,IST-SL1,ISTSL1,60.0,Academic lab,SIDM00223,CVCL_1313,SCLC,Adult,Mixed,,Metastatic,lymph_node,Male,Sanger,,,ISTSL1_LUNG,753564.0,,1194.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002145,PT-lSORt3,IST-SL2,ISTSL2,,Academic lab,SIDM00230,CVCL_1314,SCLC,Unknown,Suspension,,Metastatic,pleural_effusion,Male,Sanger,,,ISTSL2_LUNG,753565.0,,450.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002146,PT-Y025ut,JHOS-3,JHOS3,48.0,Academic lab,SIDM00304,CVCL_4648,SOC,Adult,Adherent,,,ovary,Female,Sanger,serous,,JHOS3_OVARY,1480358.0,,1595.0,,,,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-002147,PT-FGLpfl,K2,K2,,Academic lab,SIDM00126,CVCL_AT85,MEL,Unknown,Unknown,,Primary,skin,Unknown,Sanger,,,K2_SKIN,1298160.0,,1980.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002148,PT-vdhvO3,K5,K5,58.0,Academic lab,SIDM00056,CVCL_1322,THPA,Adult,Unknown,,Metastatic,thyroid,Male,Sanger,,,K5_THYROID,924238.0,This line is a GLAG-66 derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,365.0,,,,None,THPA,Papillary Thyroid Cancer,Well-Differentiated Thyroid Cancer,Thyroid +ACH-002149,PT-yB2Czj,KGN,KGN,63.0,Academic lab,SIDM00302,CVCL_0375,GRCT,Adult,Adherent,,Primary,ovary,Female,Sanger,,RCB1154,KGN_OVARY,924186.0,,11.0,,Unknown,,None,GRCT,Granulosa Cell Tumor,Sex Cord Stromal Tumor,Ovary/Fallopian Tube +ACH-002150,PT-fygqZz,LB1047-RCC,LB1047RCC,,Academic lab,SIDM00187,CVCL_1364,RCC,Unknown,Unknown,,Primary,kidney,Female,Sanger,,,LB1047RCC_KIDNEY,753577.0,,658.0,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002151,PT-hcnphT,LB2241-RCC,LB2241RCC,,Academic lab,SIDM00186,CVCL_1365,RCC,Unknown,Unknown,,Primary,kidney,Male,Sanger,,,LB2241RCC_KIDNEY,753578.0,,552.0,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002152,PT-g7qDcx,LB2518-MEL,LB2518MEL,,Academic lab,SIDM00185,CVCL_1366,MEL,Unknown,Unknown,,Primary,skin,Female,Sanger,,,LB2518MEL_SKIN,753579.0,,1464.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002153,PT-rIlRDz,LB373-MEL-D,LB373MELD,,Academic lab,SIDM00184,CVCL_1367,MEL,Unknown,Unknown,,Primary,skin,Female,Sanger,,,LB373MELD_SKIN,753581.0,,659.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002154,PT-JQF9VX,LB647-SCLC,LB647SCLC,,Academic lab,SIDM00183,CVCL_1368,SCLC,Unknown,Unknown,,Primary,lung,Male,Sanger,,,LB647SCLC_LUNG,753582.0,,1365.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002155,PT-RdOp4M,LB996-RCC,LB996RCC,,Academic lab,SIDM00180,CVCL_1371,RCC,Unknown,Unknown,,Primary,kidney,Male,Sanger,,,LB996RCC_KIDNEY,753585.0,,1755.0,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002156,PT-ZglKg6,LC-1-sq,LC1SQ,69.0,Academic lab,SIDM00300,CVCL_3008,LUSC,Adult,Adherent,,Primary,lung,Male,Sanger,NSCLC_squamous,,LC1SQ_LUNG,1298223.0,,600.0,,,,None,LUSC,Lung Squamous Cell Carcinoma,Non-Small Cell Lung Cancer,Lung +ACH-002157,PT-pFzWyx,LC-2-ad,LC2AD,51.0,Academic lab,SIDM00297,CVCL_1373,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Female,Sanger,NSCLC_adenocarcinoma,,LC2AD_LUNG,907786.0,,367.0,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-002158,PT-IpPvfc,LU-99A,LU99A,63.0,Commercial,SIDM01219,CVCL_1393,GCLC,Adult,Adherent,,,lung,Male,JCRB,NSCLC_large_cell,,LU99A_LUNG,907796.0,,1660.0,,,,None,GCLC,Giant Cell Carcinoma of the Lung,Non-Small Cell Lung Cancer,Lung +ACH-002159,PT-3NwoWt,M14,M14,33.0,Academic lab,SIDM00003,CVCL_1395,MEL,Adult,Unknown,,Metastatic,skin,Male,Sanger,amelanotic,,M14_SKIN,905975.0,,586.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002160,PT-wGDMGe,MC-IXC,MCIXC,14.0,Academic lab,SIDM01246,CVCL_1398,ES,Pediatric,Adherent,,Metastatic,bone,Female,Sanger,,,MCIXC_BONE,908118.0,,170.0,,,,None,ES,Ewing Sarcoma,Ewing Sarcoma,Bone +ACH-002161,PT-T2KFTw,MKN28,MKN28,37.0,Academic lab,SIDM00260,CVCL_1416,TSTAD,Adult,Adherent,,Metastatic,liver,Male,Sanger,tubular,,MKN28_STOMACH,908139.0,SNP fingerprinting confirms that this line is a MKN74 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,2112.0,,,,None,TSTAD,Tubular Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002162,PT-Qsi22o,MMAC-SF,MMACSF,39.0,Academic lab,SIDM01242,CVCL_1420,MEL,Adult,Adherent,,Metastatic,ascites,Female,Sanger,,RCB1200,MMACSF_SKIN,925339.0,,30.0,,Unknown,,None,MEL,Melanoma,Melanoma,Skin +ACH-002163,PT-IF9xYA,MRK-nu-1,MRKNU1,46.0,Academic lab,SIDM00562,CVCL_1428,ILC,Adult,Suspension,,Primary,breast,Female,Sanger,,,MRKNU1_BREAST,908151.0,,385.0,,,,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002164,PT-PReW1L,MZ1-PC,MZ1PC,46.0,Academic lab,SIDM00053,CVCL_1434,PAAD,Adult,Unknown,,Metastatic,pancreas,Male,Sanger,exocrine_adenocarcinoma,,MZ1PC_PANCREAS,753595.0,,1486.0,,,,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-002165,PT-nROhtu,MZ2-MEL,MZ2MEL,,Academic lab,SIDM00179,CVCL_1435,MEL,Unknown,Adherent,,Primary,skin,Unknown,Sanger,,,MZ2MEL_SKIN,971777.0,,31.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002166,PT-XDM0rA,MZ7-mel,MZ7MEL,25.0,Academic lab,SIDM00516,CVCL_1436,MEL,Adult,Unknown,,Metastatic,skin,Female,Sanger,,,MZ7MEL_SKIN,753596.0,,296.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002167,PT-UU2AWA,NCC010,NCC010,,Academic lab,SIDM00231,CVCL_X505,RCC,Unknown,Unknown,,Primary,kidney,Male,Sanger,,,NCC010_KIDNEY,1509073.0,,688.0,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002168,PT-udyljV,NCC021,NCC021,,Academic lab,SIDM00232,CVCL_X506,RCC,Unknown,Unknown,,Primary,kidney,Unknown,Sanger,,,NCC021_KIDNEY,1509074.0,,1020.0,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002169,PT-yeOzm7,NCI-H1304,NCIH1304,,Academic lab,SIDM00648,CVCL_1462,SCLC,Unknown,Suspension,,Primary,lung,Unknown,Sanger,,,NCIH1304_LUNG,753599.0,"SNP fingerprinting confirms that this line is a NCI-H1304, NCI-H1870 (synonymous cell lines, donor origin unknown) derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.",775.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002170,PT-tr3kfu,NCI-H1688,NCIH1688,50.0,Commercial,SIDM00792,CVCL_1487,SCLC,Adult,Adherent,,Metastatic,liver,Male,ATCC,,,NCIH1688_LUNG,1298349.0,,348.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002171,PT-CturGC,NCI-H250,NCIH250,34.0,Academic lab,SIDM00721,CVCL_1554,SCLC,Adult,Suspension,,Metastatic,central_nervous_system,Male,Sanger,,,NCIH250_LUNG,924241.0,,208.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002172,PT-9eMhTl,NCI-H322M,NCIH322M,52.0,Academic lab,SIDM00117,CVCL_1557,LUAD,Adult,Unknown,,,lung,Male,Sanger,NSCLC_adenocarcinoma,,NCIH322M_LUNG,905967.0,,34.0,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-002173,PT-lZve8O,NCI-H378,NCIH378,66.0,Academic lab,SIDM00915,CVCL_1560,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Female,Sanger,,,NCIH378_LUNG,688022.0,,625.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002174,PT-Phesm0,NCI-H720,NCIH720,,Academic lab,SIDM01120,CVCL_1583,LUCA,Unknown,Suspension,,Primary,lung,Male,Sanger,,,NCIH720_LUNG,687600.0,,172.0,,,,None,LUCA,Lung Carcinoid,Lung Neuroendocrine Tumor,Lung +ACH-002175,PT-drG6wp,NCI-H740,NCIH740,63.0,Commercial,SIDM01118,CVCL_1586,SCLC,Adult,Suspension,,Metastatic,lymph_node,Male,ATCC,,CRL-5840,NCIH740_LUNG,1331055.0,,925.0,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002177,PT-vyk3tQ,NCI-H835,NCIH835,48.0,Academic lab,SIDM01133,CVCL_1593,LUCA,Adult,Suspension,,Primary,lung,Female,Sanger,,,NCIH835_LUNG,753607.0,,926.0,,,,None,LUCA,Lung Carcinoid,Lung Neuroendocrine Tumor,Lung +ACH-002178,PT-8IZOGw,NY,NY,15.0,Commercial,SIDM00569,CVCL_1613,OS,Pediatric,Adherent,,Primary,bone,Male,JCRB,,JCRB0614,NY_BONE,910849.0,"Animal- human; Tissue- osteosarcoma; Profile- osteosarcoma, femur",478.0,,,MF-006-001,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-002179,PT-yqZ59K,OCUB-M,OCUBM,53.0,Academic lab,SIDM00241,CVCL_1621,BRCA,Adult,Adherent,,Metastatic,pleural_effusion,Female,Sanger,,,OCUBM_BREAST,909256.0,,1002.0,,,,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002180,PT-QqQeRO,OMC-1,OMC1,52.0,Academic lab,SIDM00240,CVCL_1623,CESC,Adult,Adherent,,Metastatic,lymph_node,Female,Sanger,,,OMC1_CERVIX,949154.0,,605.0,,,,None,CESC,Cervical Squamous Cell Carcinoma,Cervical Squamous Cell Carcinoma,Cervix +ACH-002181,PT-B4cHwN,OVCA420,OVCA420,,Academic lab,SIDM00967,CVCL_3935,SOC,Unknown,Adherent,,,ovary,Female,Sanger,serous,,OVCA420_OVARY,1480364.0,,1949.0,,,,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-002182,PT-SEFFqc,OVCA433,OVCA433,,Academic lab,SIDM00966,CVCL_0475,SOC,Unknown,Adherent,,Primary,ovary,Female,Sanger,serous,,OVCA433_OVARY,1480367.0,,1332.0,,,,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-002183,PT-P1CUUK,OVMIU,OVMIU,,Academic lab,SIDM00465,CVCL_3112,HGSOC,Unknown,Unknown,,,ovary,Unknown,Sanger,high_grade_serous,,OVMIU_OVARY,1240200.0,This line is a OVSAYO derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,373.0,,,,None,HGSOC,High-Grade Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-002184,PT-tDs036,PC-3_[JPC-3],PC3JPC3,48.0,Academic lab,SIDM00361,CVCL_S982,LUAD,Adult,Unknown,,,lung,Female,Sanger,NSCLC_adenocarcinoma,,PC3JPC3_LUNG,1240202.0,,1809.0,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-002185,PT-X8PfQy,PL18,PL18,,Academic lab,SIDM00054,CVCL_X507,PAAD,Unknown,Adherent,,Primary,pancreas,Unknown,Sanger,exocrine_adenocarcinoma,,PL18_PANCREAS,1240208.0,,1759.0,,,,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-002186,PT-b9KnyE,PL4,PL4,,Academic lab,SIDM00042,CVCL_S976,PAAD,Unknown,Unknown,,Primary,pancreas,Unknown,Sanger,exocrine_adenocarcinoma,,PL4_PANCREAS,1298533.0,,470.0,,,,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-002187,PT-Nz9FZM,RCC-AB,RCCAB,49.0,Academic lab,SIDM00821,CVCL_5868,CCRCC,Adult,Adherent,,Primary,kidney,Male,Sanger,clear_cell,,RCCAB_KIDNEY,1524418.0,,695.0,,,,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002188,PT-A8lV6H,RCC-ER,RCCER,57.0,Academic lab,SIDM00820,CVCL_5870,CCRCC,Adult,Adherent,,Primary,kidney,Male,Sanger,clear_cell,,RCCER_KIDNEY,1524417.0,,694.0,,,,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002189,PT-UGJTj8,RCC-FG2,RCCFG2,77.0,Academic lab,SIDM00819,CVCL_5873,CCRCC,Adult,Adherent,,Primary,kidney,Male,Sanger,clear_cell,,RCCFG2_KIDNEY,1524414.0,,1904.0,,,,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002190,PT-bBuvEh,RCC-JF,RCCJF,65.0,Academic lab,SIDM00818,CVCL_5879,CCRCC,Adult,Adherent,,Primary,kidney,Female,Sanger,clear_cell,,RCCJF_KIDNEY,1524415.0,,147.0,,,,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002191,PT-E4jV53,RCC-JW,RCCJW,46.0,Academic lab,SIDM00817,CVCL_5880,CCRCC,Adult,Adherent,,Primary,kidney,Male,Sanger,clear_cell,,RCCJW_KIDNEY,1524416.0,,1905.0,,,,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002192,PT-wvM1VG,RCC-MF,RCCMF,63.0,Academic lab,SIDM00816,CVCL_5884,CCRCC,Adult,Adherent,,Primary,kidney,Male,Sanger,clear_cell,,RCCMF_KIDNEY,1524419.0,,693.0,,,,None,CCRCC,Renal Clear Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002193,PT-3OPSyo,RERF-LC-FM,RERFLCFM,,Academic lab,SIDM00357,CVCL_1653,SCLC,Unknown,Unknown,,Metastatic,pleural_effusion,Male,Sanger,,,RERFLCFM_LUNG,930081.0,,287.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002195,PT-snAf3A,RXF393,RXF393,54.0,Academic lab,SIDM00086,CVCL_1673,RCC,Adult,Unknown,,Primary,kidney,Male,Sanger,,,RXF393_KIDNEY,905978.0,,1526.0,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002196,PT-yYQZqk,SBC-1,SBC1,46.0,Academic lab,SIDM00365,CVCL_1676,SCLC,Adult,Adherent,,Primary,lung,Male,Sanger,,,SBC1_LUNG,713885.0,,27.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002197,PT-YmUNwK,SBC-3,SBC3,24.0,Academic lab,SIDM00367,CVCL_1678,SCLC,Adult,Adherent,,Metastatic,bone_marrow,Male,Sanger,,,SBC3_LUNG,753610.0,,1765.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002198,PT-PDLcVN,SCH,SCH,46.0,Academic lab,SIDM00383,CVCL_1687,EGCT,Adult,Unknown,,Metastatic,stomach,Male,Sanger,,,SCH_STOMACH,909711.0,,1766.0,,,,None,EGCT,Extra Gonadal Germ Cell Tumor,Extra Gonadal Germ Cell Tumor,Other +ACH-002199,PT-I7IjgB,SN12C,SN12C,,Academic lab,SIDM00094,CVCL_1705,RCC,Unknown,Adherent,,Primary,kidney,Male,Sanger,,,SN12C_KIDNEY,905979.0,,156.0,,,,None,RCC,Renal Cell Carcinoma,Renal Cell Carcinoma,Kidney +ACH-002200,PT-c9lrOB,SW962,SW962,64.0,Academic lab,SIDM01178,CVCL_1733,VMM,Adult,Adherent,,Metastatic,lymph_node,Female,Sanger,,,SW962_VULVA,909758.0,,1986.0,,,,None,VMM,Mucosal Melanoma of the Vulva/Vagina,Mucosal Melanoma of the Vulva/Vagina,Vulva/Vagina +ACH-002201,PT-UUJMxu,TC-YIK,TCYIK,31.0,Academic lab,SIDM00234,CVCL_1737,SCCE,Adult,Suspension,,Primary,cervix,Female,Sanger,,,TCYIK_CERVIX,946357.0,,579.0,,,,None,SCCE,Small Cell Carcinoma of the Cervix,Small Cell Carcinoma of the Cervix,Cervix +ACH-002202,PT-xnqeDr,TMK-1,TMK1,21.0,Academic lab,SIDM00040,CVCL_4384,STAD,Adult,Adherent,,Metastatic,lymph_node,Male,Sanger,,,TMK1_STOMACH,1299069.0,,547.0,,,,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002204,PT-TtJhKT,U-CH2,UCH2,72.0,Academic lab,SIDM01185,CVCL_4989,CHDM,Adult,Adherent,,Primary,bone,Female,Sanger,chordoma_sacral,,UCH2_BONE,1503373.0,,2257.0,,,MF-012-001,None,CHDM,Chordoma,Chordoma,Bone +ACH-002205,PT-rEtHCm,WM1552C,WM1552C,72.0,Academic lab,SIDM00976,CVCL_6472,SKCM,Adult,Adherent,,Primary,skin,Male,Sanger,,,WM1552C_SKIN,1299078.0,,1155.0,,,,None,SKCM,Cutaneous Melanoma,Melanoma,Skin +ACH-002206,PT-7Zvs5p,WM278,WM278,62.0,Academic lab,SIDM00975,CVCL_6473,MEL,Adult,Adherent,,Primary,skin,Female,Sanger,,,WM278_SKIN,1240226.0,,2155.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002207,PT-W5DHQ6,WM35,WM35,24.0,Academic lab,SIDM00974,CVCL_0580,MEL,Adult,Adherent,,Primary,skin,Female,Sanger,,,WM35_SKIN,1299080.0,,1156.0,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002208,PT-k1TO7o,YMB-1-E,YMB1E,63.0,Academic lab,SIDM01261,CVCL_2815,IDC,Adult,Unknown,luminal,Metastatic,ascites,Female,Sanger,,,YMB1E_BREAST,1303911.0,SNP fingerprinting confirms that this line is a ZR-75-1 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,317.0,,,,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002209,PT-XE2gZt,ALL-PO,ALLPO,0.0,Academic lab,SIDM00211,CVCL_1069,BLL,Pediatric,Suspension,,,bone_marrow,Female,Sanger,b_cell,,ALLPO_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910944.0,,1637.0,,,,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-002210,PT-n0zwmY,ARH-77,ARH77,33.0,Academic lab,SIDM00900,CVCL_1072,ZIMMBL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,Sanger,,,ARH77_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906765.0,,2198.0,,,,None,,Immortalized Blood,Non-Cancerous,Myeloid +ACH-002211,PT-AlKXkO,BALL-1,BALL1,75.0,Academic lab,SIDM00287,CVCL_1075,BLL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,Sanger,b_cell,,BALL1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910705.0,,48.0,,,,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-002212,PT-ezsoUP,BB30-HNC,BB30HNC,,Academic lab,SIDM00172,CVCL_1076,HNSC,Unknown,Unknown,,,upper_aerodigestive_tract,Female,Sanger,,,BB30HNC_UPPER_AERODIGESTIVE_TRACT,753531.0,,64.0,,,,None,HNSC,Head and Neck Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002213,PT-2UHafq,BB49-HNC,BB49HNC,70.0,Academic lab,SIDM00174,CVCL_1077,OCSC,Adult,Unknown,,,upper_aerodigestive_tract,Female,Sanger,,,BB49HNC_UPPER_AERODIGESTIVE_TRACT,753532.0,,1522.0,,,,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002214,PT-83LwGP,BC-1,BC1,46.0,Commercial,SIDM00896,CVCL_1079,PEL,Adult,Suspension,,Primary,peritoneum,Male,ATCC,b_cell_primary_effusion,CRL-2230,BC1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910919.0,,585.0,,Unknown,MF-001-020,None,PEL,Primary Effusion Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002215,PT-tSpUfL,BC-3,BC3,85.0,Commercial,SIDM00895,CVCL_1080,PEL,Adult,Adherent,,,pleural_effusion,Male,ATCC,b_cell_primary_effusion,CRL-2277,BC3_PLEURA,910918.0,,590.0,,,MF-001-020,None,PEL,Primary Effusion Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002216,PT-qXF8IT,BE-13,BE13,4.0,Academic lab,SIDM01245,CVCL_1081,TLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,Sanger,t_cell,,BE13_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906763.0,SNP fingerprinting confirms that this line is a PEER derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,603.0,,,,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-002217,PT-k4Daz3,BE2-M17,BE2M17,2.0,Academic lab,SIDM01229,CVCL_0167,NBL,Pediatric,Adherent,,Metastatic,bone_marrow,Male,Sanger,,,BE2M17_AUTONOMIC_GANGLIA,753616.0,,1320.0,,,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002218,PT-58XiOC,CESS,CESS,,Academic lab,SIDM00917,CVCL_0209,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,Sanger,,,CESS_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910688.0,,185.0,,,,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-002219,PT-UB7otW,COLO-320-HSR,COLO320HSR,55.0,Academic lab,SIDM00842,CVCL_0220,COAD,Adult,Mixed,,,large_intestine,Female,Sanger,,,COLO320HSR_LARGE_INTESTINE,910569.0,,2128.0,,,,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-002220,PT-5tuiJU,CRO-AP2,CROAP2,49.0,Academic lab,SIDM00952,CVCL_1147,PEL,Adult,Suspension,,,pleural_effusion,Male,Sanger,b_cell_primary_effusion,,CROAP2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906807.0,,566.0,,,,None,PEL,Primary Effusion Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002221,PT-DAcxSo,CTB-1,CTB1,70.0,Academic lab,SIDM00283,CVCL_1149,DLBCLNOS,Adult,Suspension,,Metastatic,pericardial_effusion,Male,Sanger,DLBCL,,CTB1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,949088.0,,2129.0,,,,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-002222,PT-qdQICQ,CTV-1,CTV1,,Academic lab,SIDM00951,CVCL_1150,ATLL,Unknown,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,Sanger,t_cell,,CTV1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,753548.0,,1034.0,,,,None,ATLL,Adult T-Cell Leukemia/Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002223,PT-YGlLSJ,D-245MG,D245MG,70.0,Academic lab,SIDM01021,CVCL_1152,GB,Adult,Unknown,,Primary,central_nervous_system,Male,Sanger,glioblastoma,,D245MG_CENTRAL_NERVOUS_SYSTEM,946366.0,,1249.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-002224,PT-wR1h2Q,D-247MG,D247MG,80.0,Academic lab,SIDM00622,CVCL_1153,GSARC,Adult,Unknown,,Primary,central_nervous_system,Female,Sanger,glioblastoma,,D247MG_CENTRAL_NERVOUS_SYSTEM,946367.0,,1075.0,,,,None,GSARC,Gliosarcoma,Diffuse Glioma,CNS/Brain +ACH-002225,PT-rz5abQ,D-263MG,D263MG,71.0,Academic lab,SIDM00732,CVCL_1154,GB,Adult,Unknown,,Primary,central_nervous_system,Female,Sanger,glioblastoma,,D263MG_CENTRAL_NERVOUS_SYSTEM,946368.0,,453.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-002226,PT-33qOrA,D-336MG,D336MG,68.0,Academic lab,SIDM00620,CVCL_1156,GSARC,Adult,Unknown,,Primary,central_nervous_system,Male,Sanger,glioblastoma,,D336MG_CENTRAL_NERVOUS_SYSTEM,946369.0,,609.0,,,,None,GSARC,Gliosarcoma,Diffuse Glioma,CNS/Brain +ACH-002227,PT-HArQvF,D-392MG,D392MG,,Academic lab,SIDM00542,CVCL_1158,GB,Unknown,Unknown,,Primary,central_nervous_system,Female,Sanger,glioblastoma,,D392MG_CENTRAL_NERVOUS_SYSTEM,946370.0,,1527.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-002228,PT-j6PGXD,D-423MG,D423MG,,Academic lab,SIDM00209,CVCL_1160,GB,Unknown,Unknown,,Primary,central_nervous_system,Male,Sanger,glioblastoma,,D423MG_CENTRAL_NERVOUS_SYSTEM,946372.0,,2092.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-002229,PT-lcJ20a,D-502MG,D502MG,,Academic lab,SIDM00208,CVCL_1162,GB,Unknown,Unknown,,Primary,central_nervous_system,Unknown,Sanger,glioblastoma,,D502MG_CENTRAL_NERVOUS_SYSTEM,946373.0,,768.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-002230,PT-WBoaow,D-542MG,D542MG,,Academic lab,SIDM00207,CVCL_1164,GB,Unknown,Unknown,,Primary,central_nervous_system,Female,Sanger,glioblastoma,,D542MG_CENTRAL_NERVOUS_SYSTEM,753549.0,,898.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-002231,PT-1mC1qE,D-566MG,D566MG,,Academic lab,SIDM00206,CVCL_1166,GB,Unknown,Unknown,,Primary,central_nervous_system,Male,Sanger,glioblastoma,,D566MG_CENTRAL_NERVOUS_SYSTEM,946377.0,,2093.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-002232,PT-HuRCiE,DG-75,DG75,10.0,Academic lab,SIDM00948,CVCL_0244,BL,Pediatric,Suspension,,,pleural_effusion,Male,Sanger,b_cell_burkitt,,DG75_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906838.0,,188.0,,,,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002233,PT-E7CRZu,DIFI,DIFI,46.0,Academic lab,SIDM00049,CVCL_6895,COADREAD,Adult,Unknown,,Metastatic,ascites,Female,Sanger,,,DIFI_LARGE_INTESTINE,1789883.0,,1625.0,,,,None,COADREAD,Colorectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-002234,PT-CTZO5B,DOK,DOK,57.0,Academic lab,SIDM00540,CVCL_1180,OHNCA,Adult,Adherent,,,upper_aerodigestive_tract,Male,Sanger,,,DOK_UPPER_AERODIGESTIVE_TRACT,910936.0,,162.0,,,,None,OHNCA,"Head and Neck Carcinoma, Other","Head and Neck Carcinoma, Other",Head and Neck +ACH-002235,PT-00Jas3,DSH1,DSH1,48.0,Academic lab,SIDM00970,CVCL_1182,BLCA,Adult,Adherent,,Primary,urinary_tract,Male,Sanger,,,DSH1_URINARY_TRACT,753552.0,,900.0,,,,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-002236,PT-YGnGsk,EB-3,EB3,3.0,Commercial,SIDM00793,CVCL_1185,BL,Pediatric,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,ATCC,b_cell_burkitt,,EB3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906847.0,Depmap has correct ATCC stock,581.0,,,MF-001-001,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002237,PT-hoMjwu,ETK-1,ETK1,,Academic lab,SIDM00276,CVCL_1206,IHCH,Unknown,Unknown,,Primary,biliary_tract,Female,Sanger,intrahepatic,,ETK1_BILIARY_TRACT,906861.0,SNP fingerprinting confirms that this line is an SSP-25 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,323.0,,,,None,IHCH,Intrahepatic Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-002238,PT-ffpEbF,GR-ST,GRST,11.0,Academic lab,SIDM01259,CVCL_1236,BLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,Sanger,b_cell,,GRST_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,906877.0,,1709.0,,,,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-002239,PT-cOGAys,H3118,H3118,,Academic lab,SIDM00517,CVCL_A464,MUCC,Unknown,Unknown,,,upper_aerodigestive_tract,Female,NCI-Navy Medical Oncology Branch,,,H3118_UPPER_AERODIGESTIVE_TRACT,1240140.0,,93.0,,,,None,MUCC,Mucoepidermoid Carcinoma,Salivary Carcinoma,Head and Neck +ACH-002240,PT-PrSlzw,H9,H9,53.0,Academic lab,SIDM01251,CVCL_1240,SS,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,Sanger,t_cell_cutaneous,,H9_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907043.0,,903.0,,,,None,SS,Sezary Syndrome,Non-Hodgkin Lymphoma,Lymphoid +ACH-002241,PT-iIMRAX,HAL-01,HAL01,17.0,Academic lab,SIDM00289,CVCL_1242,BLL,Pediatric,Mixed,,Primary,haematopoietic_and_lymphoid_tissue,Female,St Jude via Tokyo,b_cell,,HAL01_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,949153.0,,1192.0,,,MF-001-001,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-002242,PT-5Qfjav,HC-1,HC1,56.0,Academic lab,SIDM01073,CVCL_1243,HCL,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,Sanger,,,HC1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907044.0,,637.0,,,,None,HCL,Hairy Cell Leukemia,Non-Hodgkin Lymphoma,Lymphoid +ACH-002243,PT-mb1xAp,HCE-4,HCE4,50.0,Academic lab,SIDM00052,CVCL_1271,ESCC,Adult,Unknown,,Primary,oesophagus,Female,Sanger,,,HCE4_OESOPHAGUS,753559.0,,2077.0,,,,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-002244,PT-vSXKPA,HO-1-N-1,HO1N1,,Academic lab,SIDM00592,CVCL_1284,OCSC,Unknown,Adherent,,,upper_aerodigestive_tract,Male,Sanger,oral,,HO1N1_UPPER_AERODIGESTIVE_TRACT,924111.0,,706.0,,,,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002245,PT-tBHRaj,Hs-445,HS445,56.0,Commercial,SIDM00668,CVCL_0761,HL,Adult,Suspension,,Primary,lymph_node,Female,ATCC,,HTB-146,HS445_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1322218.0,,1243.0,,,MF-001-001,None,HL,Hodgkin Lymphoma,Hodgkin Lymphoma,Lymphoid +ACH-002246,PT-CpAxdc,Hs 633.T,HS633T,25.0,Commercial,SIDM00667,CVCL_0832,FIBS,Adult,Adherent,,Primary,soft_tissue,Female,Sigma,,,HS633T_SOFT_TISSUE,1240149.0,,1568.0,,,MF-002-003,None,FIBS,Fibrosarcoma,Fibrosarcoma,Soft Tissue +ACH-002247,PT-7Xxqhs,IM-9,IM9,,Academic lab,SIDM00632,CVCL_1305,ZIMMBL,Unknown,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,Sanger,,,IM9_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,753563.0,,1574.0,,,,None,,Immortalized Blood,Non-Cancerous,Myeloid +ACH-002248,PT-2Urqss,IMR-5,IMR5,1.0,Academic lab,SIDM01206,CVCL_1306,NBL,Pediatric,Adherent,,Metastatic,abdomen,Male,Sanger,,HTL00009,IMR5_AUTONOMIC_GANGLIA,907170.0,,431.0,,Unknown,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002249,PT-eHeXj9,JHU-011,JHU011,45.0,Academic lab,SIDM00128,CVCL_5986,LXSC,Adult,Unknown,,,upper_aerodigestive_tract,Male,Sanger,laryngeal,,JHU011_UPPER_AERODIGESTIVE_TRACT,1240161.0,,1233.0,,,,None,LXSC,Larynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002250,PT-jWO6Gr,JHU-022,JHU022,53.0,Academic lab,SIDM00127,CVCL_5991,LXSC,Adult,Unknown,,,upper_aerodigestive_tract,Male,Sanger,oral,,JHU022_UPPER_AERODIGESTIVE_TRACT,1240162.0,,615.0,,,,None,LXSC,Larynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002251,PT-BKuNli,JHU-029,JHU029,70.0,Academic lab,SIDM00690,CVCL_5993,LXSC,Adult,Adherent,,,upper_aerodigestive_tract,Male,Sanger,laryngeal,,JHU029_UPPER_AERODIGESTIVE_TRACT,1298156.0,,74.0,,,,None,LXSC,Larynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002252,PT-kbk41J,JiyoyeP-2003,JIYOYEP2003,7.0,Academic lab,SIDM00808,CVCL_1317,BL,Pediatric,Suspension,,Primary,ascites,Male,Sanger,b_cell_burkitt,CCL-87,JIYOYEP2003_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907268.0,,1941.0,,Unknown,,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002253,PT-A8EHj7,JSC-1,JSC1,52.0,Academic lab,SIDM00688,CVCL_3728,PEL,Adult,Suspension,,Metastatic,ascites,Male,Sanger,b_cell_primary_effusion,Discontinued,JSC1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1327769.0,,1378.0,,Unknown,,None,PEL,Primary Effusion Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002254,PT-hojCov,KARPAS-1106P,KARPAS1106P,23.0,Academic lab,SIDM01011,CVCL_1821,PMBL,Adult,Suspension,,,pleural_effusion,Female,Sanger,b_cell_mediastinal_large,,KARPAS1106P_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1327773.0,,1030.0,,,,None,PMBL,Primary Mediastinal (Thymic) Large B-Cell Lymphoma (PMBL),Non-Hodgkin Lymphoma,Lymphoid +ACH-002255,PT-kgcT41,KARPAS-231,KARPAS231,71.0,Academic lab,SIDM01017,CVCL_1822,DLBCLNOS,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,Sanger,DLBCL,,KARPAS231_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1327774.0,,2177.0,,,,None,DLBCLNOS,"Diffuse Large B-Cell Lymphoma, NOS",Non-Hodgkin Lymphoma,Lymphoid +ACH-002256,PT-rfP1an,KARPAS-45,KARPAS45,2.0,Academic lab,SIDM01007,CVCL_1326,TLL,Pediatric,Suspension,,,bone_marrow,Male,Sanger,t_cell,,KARPAS45_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907272.0,,617.0,,,,None,TLL,T-Lymphoblastic Leukemia/Lymphoma,T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-002257,PT-jXI5k9,KINGS-1,KINGS1,67.0,Academic lab,SIDM00612,CVCL_1328,AASTR,Adult,Unknown,,Primary,central_nervous_system,Male,Sanger,astrocytoma,,KINGS1_CENTRAL_NERVOUS_SYSTEM,907279.0,,217.0,,,,None,AASTR,Anaplastic Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-002258,PT-z6dvcU,KMOE-2,KMOE2,2.0,Academic lab,SIDM01019,CVCL_1332,AML,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,Sanger,M6,,KMOE2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907280.0,,1803.0,,,,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-002259,PT-hM3DN4,KNS-81-FD,KNS81FD,65.0,Academic lab,SIDM01210,CVCL_1336,GB,Adult,Unknown,,Primary,central_nervous_system,Male,Sanger,glioblastoma,,KNS81FD_CENTRAL_NERVOUS_SYSTEM,924188.0,,1150.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-002261,PT-Buhbke,KP-N-YS,KPNYS,4.0,Academic lab,SIDM00157,CVCL_1342,NBL,Pediatric,Unknown,,,central_nervous_system,Male,Sanger,,,KPNYS_AUTONOMIC_GANGLIA,946363.0,,853.0,,,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002262,PT-sF0RPg,KY821,KY821,28.0,Academic lab,SIDM00553,CVCL_1346,AMML,Adult,Unknown,,Primary,haematopoietic_and_lymphoid_tissue,Male,Sanger,M4,0105,KY821_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907300.0,,1631.0,,Unknown,,None,AMML,Acute Myelomonocytic Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-002263,PT-9W7vg3,KYSE-220,KYSE220,78.0,Academic lab,SIDM00551,CVCL_1359,ESCC,Adult,Adherent,,Primary,oesophagus,Male,Sanger,,,KYSE220_OESOPHAGUS,1240167.0,,1614.0,,,,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-002264,PT-4VDquK,KYSE-50,KYSE50,58.0,Academic lab,SIDM00550,CVCL_1360,ESCC,Adult,Unknown,,Primary,oesophagus,Male,Sanger,,,KYSE50_OESOPHAGUS,1298222.0,,1939.0,,,,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-002265,PT-4F46jD,LB771-HNC,LB771HNC,,Academic lab,SIDM00182,CVCL_1369,HNSC,Unknown,Unknown,,Primary,upper_aerodigestive_tract,Male,Sanger,,,LB771HNC_UPPER_AERODIGESTIVE_TRACT,753583.0,,12.0,,,,None,HNSC,Head and Neck Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002266,PT-Ymhhgy,LB831-BLC,LB831BLC,65.0,Academic lab,SIDM00181,CVCL_1370,BLCA,Adult,Unknown,,Primary,urinary_tract,Male,Sanger,,,LB831BLC_URINARY_TRACT,753584.0,,1267.0,,,,None,BLCA,Bladder Urothelial Carcinoma,Bladder Urothelial Carcinoma,Bladder/Urinary Tract +ACH-002267,PT-BXxYIw,LC4-1,LC41,13.0,Academic lab,SIDM00549,CVCL_1374,BLL,Pediatric,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,Sanger,b_cell,,LC41_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,907787.0,,583.0,,,,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-002268,PT-JHlklp,LN-405,LN405,61.0,Academic lab,SIDM00343,CVCL_1378,GB,Adult,Adherent,,Primary,central_nervous_system,Female,Sanger,glioblastoma,,LN405_CENTRAL_NERVOUS_SYSTEM,910694.0,,1505.0,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-002269,PT-zboiLS,LNZTA3WT4,LNZTA3WT4,60.0,Academic lab,SIDM01220,CVCL_3540,ASTR,Adult,Adherent,,Primary,central_nervous_system,Male,Sanger,astrocytoma,,LNZTA3WT4_CENTRAL_NERVOUS_SYSTEM,1240170.0,,1793.0,,,,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-002270,PT-QjtmPJ,MC-CAR,MCCAR,81.0,Academic lab,SIDM00636,CVCL_1397,ZIMMBL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,Sanger,,,MCCAR_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,683665.0,,49.0,,,,None,,Immortalized Blood,Non-Cancerous,Myeloid +ACH-002271,PT-6WauwF,MFH-ino,MFHINO,45.0,Academic lab,SIDM00299,CVCL_1407,MFH,Adult,Adherent,,,soft_tissue,Female,Sanger,,,MFHINO_SOFT_TISSUE,925343.0,,2069.0,,,,None,MFH,Undifferentiated Pleomorphic Sarcoma/Malignant Fibrous Histiocytoma/High-Grade Spindle Cell Sarcoma,Undifferentiated Pleomorphic Sarcoma/Malignant Fibrous Histiocytoma/High-Grade Spindle Cell Sarcoma,Soft Tissue +ACH-002272,PT-dg9oke,MHH-PREB-1,MHHPREB1,7.0,Academic lab,SIDM00388,CVCL_1413,MBN,Pediatric,Suspension,,,lymph_node,Male,Sanger,b_cell,,MHHPREB1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908136.0,,788.0,,,,None,MBN,Mature B-Cell Neoplasms,Non-Hodgkin Lymphoma,Lymphoid +ACH-002273,PT-I84npj,ML-2,ML2,26.0,Academic lab,SIDM00441,CVCL_1418,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,Sanger,,,ML2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908141.0,,628.0,,,,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-002274,PT-HhcayS,MLMA,MLMA,32.0,Academic lab,SIDM00561,CVCL_1419,HCL,Adult,Suspension,,Primary,ascites,Female,Sanger,,JCRB0146,MLMA_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908142.0,,1228.0,,Unknown,,None,HCL,Hairy Cell Leukemia,Non-Hodgkin Lymphoma,Lymphoid +ACH-002275,PT-s1crSa,MN-60,MN60,20.0,Academic lab,SIDM00438,CVCL_1421,BL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,Sanger,b_cell,,MN60_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908143.0,,1177.0,,,,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002276,PT-DWKd8J,MY-M12,MYM12,52.0,Academic lab,SIDM01217,CVCL_3035,ALAL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,Sanger,,,MYM12_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330960.0,,126.0,,,,None,ALAL,Acute Leukemias of Ambiguous Lineage,Acute Leukemias of Ambiguous Lineage,Myeloid +ACH-002277,PT-4SN8BW,NB(TU)1-10,NBTU110,1.0,Academic lab,SIDM00579,CVCL_3041,NBL,Pediatric,Adherent,,Primary,abdomen,Female,Sanger,,JCRB0154,NBTU110_AUTONOMIC_GANGLIA,1240181.0,,730.0,,,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002278,PT-1wIoRq,NB10,NB10,2.0,Academic lab,SIDM00259,CVCL_1441,NBL,Pediatric,Unknown,,Primary,central_nervous_system,Male,Sanger,,,NB10_AUTONOMIC_GANGLIA,949171.0,,1033.0,,,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002279,PT-hZiuYw,NB12,NB12,0.0,Academic lab,SIDM00258,CVCL_1442,NBL,Pediatric,Unknown,,Metastatic,central_nervous_system,Female,Sanger,,,NB12_AUTONOMIC_GANGLIA,949172.0,,1779.0,,,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002280,PT-pJmC9b,NB13,NB13,1.0,Academic lab,SIDM00257,CVCL_1443,NBL,Pediatric,Unknown,,Primary,central_nervous_system,Male,Sanger,,,NB13_AUTONOMIC_GANGLIA,949177.0,,215.0,,,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002281,PT-9FlAFU,NB14,NB14,1.0,Academic lab,SIDM00256,CVCL_1444,NBL,Pediatric,Unknown,,Primary,central_nervous_system,Female,Sanger,,,NB14_AUTONOMIC_GANGLIA,949178.0,,32.0,,,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002282,PT-KDwcNS,NB17,NB17,1.0,Academic lab,SIDM00255,CVCL_1445,NBL,Pediatric,Unknown,,Primary,central_nervous_system,Female,Sanger,,,NB17_AUTONOMIC_GANGLIA,949175.0,,159.0,,,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002283,PT-x400Sq,NB5,NB5,2.0,Academic lab,SIDM00254,CVCL_8822,NBL,Pediatric,Adherent,,Metastatic,central_nervous_system,Female,Sanger,,,NB5_AUTONOMIC_GANGLIA,949176.0,,2071.0,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002284,PT-f93T4X,NB6,NB6,,Academic lab,SIDM00253,CVCL_8823,NBL,Unknown,Unknown,,Primary,central_nervous_system,Male,Sanger,,,NB6_AUTONOMIC_GANGLIA,949173.0,,2258.0,,,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002285,PT-ssOn9A,NB7,NB7,0.0,Academic lab,SIDM00156,CVCL_8824,NBL,Pediatric,Unknown,,Primary,central_nervous_system,Male,Sanger,,,NB7_AUTONOMIC_GANGLIA,949174.0,,1861.0,,,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002286,PT-eS45m8,NCI-H128,NCIH128,60.0,Academic lab,SIDM00650,CVCL_1460,SCLC,Adult,Suspension,,Metastatic,pleural_effusion,Male,Sanger,,,NCIH128_LUNG,753597.0,,1234.0,,,,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung +ACH-002287,PT-3ANo8s,NCI-H630,NCIH630,,Academic lab,,CVCL_1572,COADREAD,Unknown,Unknown,,Primary,large_intestine,Unknown,Sanger,,,NCIH630_LARGE_INTESTINE,908482.0,,338.0,,,,None,COADREAD,Colorectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-002288,PT-0YOkjz,NEC8,NEC8,24.0,Academic lab,SIDM00243,CVCL_1604,EMBCA,Adult,Adherent,,Primary,Testes,Male,Sanger,,,NEC8_TESTIS,910942.0,,1394.0,,,,None,EMBCA,Embryonal Carcinoma,Non-Seminomatous Germ Cell Tumor,Testis +ACH-002289,PT-l5O2AK,NK-92MI,NK92MI,50.0,Academic lab,SIDM01201,CVCL_3755,NKCLL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,Sanger,,,NK92MI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330981.0,,424.0,,,,None,NKCLL,Natural Killer (NK) Cell Lymphoblastic Leukemia/Lymphoma (NKCLL),T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-002290,PT-mzDUGH,NKM-1,NKM1,33.0,Commercial,SIDM00576,CVCL_1607,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Male,Sanger/JCRB,,,NKM1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,908448.0,,1488.0,,,MF-001-001,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-002291,PT-4gdieL,NTERA-2 cl.D1,NTERA2CLD1,22.0,Commercial,SIDM01203,CVCL_3407,EMBCA,Adult,Adherent,,Metastatic,lung,Male,ATCC,,CRL-1973,NTERA2CLD1_TESTIS,908454.0,,229.0,,,MF-002-001,None,EMBCA,Embryonal Carcinoma,Non-Seminomatous Germ Cell Tumor,Testis +ACH-002292,PT-j1Cwvw,OACp4C,OACP4C,55.0,Commercial,SIDM00445,CVCL_1843,ESCA,Adult,Adherent,,,oesophagus,Male,Sigma-Aldrich,,,OACP4C_OESOPHAGUS,1503362.0,,966.0,,,,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002293,PT-OGgBSC,P32-ISH,P32ISH,8.0,Academic lab,SIDM00362,CVCL_3119,BL,Pediatric,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,Sanger,b_cell_burkitt,,P32ISH_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1330987.0,,1617.0,,,,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002294,PT-jQ2G57,PCI-15A,PCI15A,69.0,Academic lab,SIDM00270,CVCL_C184,HPHSC,Adult,Unknown,,,upper_aerodigestive_tract,Male,Sanger,,,PCI15A_UPPER_AERODIGESTIVE_TRACT,1240204.0,,1217.0,,,,None,HPHSC,Hypopharynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002295,PT-BYyQBX,PCI-30,PCI30,54.0,Academic lab,SIDM00044,CVCL_C757,OCSC,Adult,Unknown,,,upper_aerodigestive_tract,Male,Sanger,,,PCI30_UPPER_AERODIGESTIVE_TRACT,1298529.0,,1042.0,,,,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002296,PT-oqands,PCI-38,PCI38,56.0,Academic lab,SIDM00155,CVCL_M471,OCSC,Adult,Unknown,,,upper_aerodigestive_tract,Male,Sanger,,,PCI38_UPPER_AERODIGESTIVE_TRACT,1240205.0,,334.0,,,,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002297,PT-kYHcXz,PCI-4B,PCI4B,51.0,Academic lab,SIDM00043,CVCL_C171,LXSC,Adult,Unknown,,Metastatic,upper_aerodigestive_tract,Male,Sanger,laryngeal,,PCI4B_UPPER_AERODIGESTIVE_TRACT,1298531.0,,1068.0,,,,None,LXSC,Larynx Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002298,PT-mnzvO8,PCI-6A,PCI6A,81.0,Academic lab,SIDM00115,CVCL_C173,OCSC,Adult,Unknown,,,upper_aerodigestive_tract,Male,Sanger,,,PCI6A_UPPER_AERODIGESTIVE_TRACT,1240206.0,,1218.0,,,,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002299,PT-e5BKI4,QIMR-WIL,QIMRWIL,69.0,Academic lab,SIDM00467,CVCL_1645,AML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,Sanger,,,QIMRWIL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910545.0,,402.0,,,,None,AML,Acute Myeloid Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-002300,PT-k9PrKk,Ramos-2G6-4C10,RAMOS2G64C10,3.0,Academic lab,SIDM01247,CVCL_1646,BL,Pediatric,Suspension,,Unknown,ascites,Male,Sanger,b_cell_burkitt,CRL-1923,RAMOS2G64C10_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910401.0,,68.0,,Unknown,,None,BL,Burkitt Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002301,PT-0drjoO,RF-48,RF48,62.0,Academic lab,SIDM01092,CVCL_1657,NHL,Adult,Unknown,,,haematopoietic_and_lymphoid_tissue,Male,Sanger,b_cell,,RF48_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909697.0,,69.0,,,,None,NHL,Non-Hodgkin Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002302,PT-CT1NQm,RPMI-8866,RPMI8866,51.0,Academic lab,SIDM00482,CVCL_1668,CML,Adult,Suspension,,Primary,haematopoietic_and_lymphoid_tissue,Female,Sanger,,,RPMI8866_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910544.0,,1525.0,,,,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-002304,PT-bxaITj,SK-MG-1,SKMG1,,Academic lab,SIDM00379,CVCL_1698,ASTR,Unknown,Unknown,,Unknown,Unknown,Unknown,Sanger,astrocytoma,,SKMG1_CENTRAL_NERVOUS_SYSTEM,909729.0,This line is a Marcus derivative (ICLAC). DepMap metadata has been updated (as of 22Q2) to reflect this.,578.0,,,,None,ASTR,Astrocytoma,Diffuse Glioma,CNS/Brain +ACH-002305,PT-ErYkxf,SKN-3,SKN3,,Academic lab,SIDM00375,CVCL_3168,OCSC,Unknown,Unknown,,,upper_aerodigestive_tract,Unknown,Sanger,,,SKN3_UPPER_AERODIGESTIVE_TRACT,1299059.0,,1910.0,,,,None,OCSC,Oral Cavity Squamous Cell Carcinoma,Head and Neck Squamous Cell Carcinoma,Head and Neck +ACH-002306,PT-3unH6V,STS-0421,STS0421,,Academic lab,SIDM00041,CVCL_X508,STAD,Unknown,Unknown,,,soft_tissue,Unknown,Sanger,,,STS0421_SOFT_TISSUE,1299061.0,,1747.0,,,,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002307,PT-mviBmp,SU-DHL-16,SUDHL16,,Academic lab,SIDM00404,CVCL_1890,MBN,Unknown,Suspension,,,pleural_effusion,Male,Sanger,b_cell,,SUDHL16_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331034.0,,1449.0,,,,None,MBN,Mature B-Cell Neoplasms,Non-Hodgkin Lymphoma,Lymphoid +ACH-002308,PT-goHLRn,SUP-B8,SUPB8,15.0,Academic lab,SIDM01177,CVCL_1713,BLL,Pediatric,Unknown,,Primary,haematopoietic_and_lymphoid_tissue,Female,Sanger,b_cell,,SUPB8_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,910209.0,,2072.0,,,,None,BLL,B-Lymphoblastic Leukemia/Lymphoma,B-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-002309,PT-CYTcP8,SW684,SW684,68.0,Academic lab,SIDM01175,CVCL_1726,FIBS,Adult,Adherent,,,soft_tissue,Male,Sanger,,,SW684_SOFT_TISSUE,909754.0,,1559.0,,,,None,FIBS,Fibrosarcoma,Fibrosarcoma,Soft Tissue +ACH-002310,PT-eA92bH,SW872,SW872,36.0,Academic lab,SIDM01159,CVCL_1730,LIPO,Adult,Adherent,,,soft_tissue,Male,Sanger,,,SW872_SOFT_TISSUE,909756.0,,1916.0,,,,None,LIPO,Liposarcoma,Liposarcoma,Soft Tissue +ACH-002311,PT-zdE6Fc,TE-12,TE12,,Academic lab,SIDM00023,CVCL_1762,ESCC,Unknown,Unknown,,,oesophagus,Unknown,Sanger,,,TE12_OESOPHAGUS,946356.0,,1611.0,,,,None,ESCC,Esophageal Squamous Cell Carcinoma,Esophageal Squamous Cell Carcinoma,Esophagus/Stomach +ACH-002312,PT-wDUj8m,TGBC24TKB,TGBC24TKB,,Academic lab,SIDM00267,CVCL_1770,GBAD,Unknown,Adherent,,Metastatic,ascites,Female,Sanger,,,TGBC24TKB_BILIARY_TRACT,910695.0,,2046.0,,,,None,GBAD,"Gallbladder Adenocarcinoma, NOS",Intracholecystic Papillary Neoplasm,Biliary Tract +ACH-002313,PT-lS0UAl,TK,TK,80.0,Academic lab,SIDM00323,CVCL_3216,MBN,Adult,Unknown,,,haematopoietic_and_lymphoid_tissue,Female,Sanger,b_cell,,TK_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331045.0,,851.0,,,,None,MBN,Mature B-Cell Neoplasms,Non-Hodgkin Lymphoma,Lymphoid +ACH-002314,PT-ZwaNYv,TUR,TUR,37.0,Academic lab,SIDM01205,CVCL_1775,AMOL,Adult,Suspension,,,pleural_effusion,Male,Sanger,M5,,TUR_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,909773.0,,6.0,,,,None,AMOL,Acute Monoblastic/Monocytic Leukemia,Acute Myeloid Leukemia,Myeloid +ACH-002316,PT-I32vbo,WIL2-NS,WIL2NS,5.0,Academic lab,SIDM01102,CVCL_2761,HSP,Pediatric,Suspension,,,spleen,Male,Sanger,,,WIL2NS_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,1331049.0,,1470.0,,,,None,,Spherocytosis,Hereditary Spherocytosis,Myeloid +ACH-002317,PT-UFGRCW,YT,YT,15.0,Academic lab,SIDM00410,CVCL_1797,NKCLL,Pediatric,Suspension,,,pericardial_effusion,Male,Sanger,,,YT_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,946358.0,,1521.0,,,,None,NKCLL,Natural Killer (NK) Cell Lymphoblastic Leukemia/Lymphoma (NKCLL),T-Lymphoblastic Leukemia/Lymphoma,Lymphoid +ACH-002319,PT-P1NL5s,184A1,184A1,21.0,,,CVCL_3040,ZIMMBR,Adult,Adherent,,,breast,Female,,,,184A1_BREAST,,,,,,,None,,Immortalized Breast Cells,Non-Cancerous,Breast +ACH-002320,PT-1cs6Ay,600MPE,600MPE,46.0,,,CVCL_9875,BRCNOS,Adult,Unknown,,Metastatic,pleural_effusion,Female,,,,600MPE_BREAST,,,,,,,None,BRCNOS,"Breast Invasive Carcinoma, NOS",Invasive Breast Carcinoma,Breast +ACH-002321,PT-g1RekN,HBL100,HBL100,,,,CVCL_4362,ZIMMBR,Unknown,Adherent,,,Unknown,Unknown,,,,HBL100_BREAST,,,,,,,None,,Immortalized Breast Cells,Non-Cancerous,Breast +ACH-002322,PT-mrDUcm,HCC2185,HCC2185,49.0,,,CVCL_3375,ILC,Adult,Suspension,,Metastatic,pleural_effusion,Female,,ERneg_HER2neg,,HCC2185_BREAST,,,,,,,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002323,PT-My4CKE,HCC2688,HCC2688,,,,CVCL_3376,DCIS,Unknown,Unknown,,,breast,Female,,,,HCC2688_BREAST,,,,,,,None,DCIS,Breast Ductal Carcinoma In Situ,Breast Ductal Carcinoma In Situ,Breast +ACH-002324,PT-fNIccy,HCC3153,HCC3153,,,,CVCL_3377,IDC,Unknown,Unknown,,,breast,Female,,ERneg_HER2neg,,HCC3153_BREAST,,,,,,,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002325,PT-viJKnw,LY2,LY2,69.0,,,CVCL_9579,BRCA,Adult,Unknown,,Metastatic,breast,Female,,,,LY2_BREAST,,,,,,,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002326,PT-JC7Q75,MACLS2,MACLS2,47.0,,,CVCL_4571,IDC,Adult,Adherent,,Metastatic,pleural_effusion,Female,,,,MACLS2_BREAST,,,,,,,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002327,PT-XQeJbT,MCF12A,MCF12A,63.0,,,CVCL_3744,ZIMMBR,Adult,Adherent,,,breast,Female,,,,MCF12A_BREAST,,,,,,,None,,Immortalized Breast Cells,Non-Cancerous,Breast +ACH-002328,PT-rWVvDJ,MX1,MX1,29.0,,,CVCL_4774,BNNOS,Adult,Adherent,,,breast,Female,,,,MX1_BREAST,,,,,,,None,BNNOS,"Breast Neoplasm, NOS","Breast Neoplasm, NOS",Breast +ACH-002329,PT-NsYBoc,SKBR5,SKBR5,,,,CVCL_5217,BNNOS,Unknown,Unknown,,,breast,Female,,,,SKBR5_BREAST,,,,,,,None,BNNOS,"Breast Neoplasm, NOS","Breast Neoplasm, NOS",Breast +ACH-002330,PT-mmWa4u,SKBR7,SKBR7,,,,CVCL_5218,BNNOS,Unknown,Unknown,,,breast,Female,,,,SKBR7_BREAST,,,,,,,None,BNNOS,"Breast Neoplasm, NOS","Breast Neoplasm, NOS",Breast +ACH-002331,PT-k1TO7o,ZR75B,ZR75B,63.0,,,CVCL_5614,BRCNOS,Adult,Unknown,,Metastatic,ascites,Female,,,,ZR75B_BREAST,,,,,,,None,BRCNOS,"Breast Invasive Carcinoma, NOS",Invasive Breast Carcinoma,Breast +ACH-002332,PT-1dc2fQ,GISTT1,GISTT1,47.0,,,CVCL_4976,GIST,Adult,Unknown,,,pleural_effusion,Female,,,,GISTT1_STOMACH,,,,,,,None,GIST,Gastrointestinal Stromal Tumor,Gastrointestinal Stromal Tumor,Soft Tissue +ACH-002333,PT-oNAx3u,HCC827GR,HCC827GR,,,,,NSCLC,Unknown,Unknown,,,lung,Unknown,,,,HCC827GR_LUNG,,,,,,,None,NSCLC,Non-Small Cell Lung Cancer,Non-Small Cell Lung Cancer,Lung +ACH-002334,PT-np4MZm,SS1A,SS1A,,,,,SYNS,Unknown,Unknown,,,soft_tissue,Unknown,,,,SS1A_SOFT_TISSUE,,,,,,,None,SYNS,Synovial Sarcoma,Synovial Sarcoma,Soft Tissue +ACH-002336,PT-BqKZQU,HCET,HCET,49.0,Academic lab,SIDM00075,CVCL_1272,ZIMMEPCOR,Adult,Adherent,,,eye,Female,Sanger,,,HCET_UPPER_AERODIGESTIVE_TRACT,,,,,,,None,,"Immortalized Epithelial Cells, Corneal, Differentiated",Non-Cancerous,Eye +ACH-002337,PT-cqv92I,JHU028,JHU028,52.0,Academic lab,SIDM00902,CVCL_5992,LUAD,Adult,Adherent,,Primary,lung,Male,Sanger,NSCLC_adenocarcinoma,,JHU028_LUNG,,SNP fingerprinting confirms that this line is an A549 derivative. DepMap metadata has been updated (as of 22Q2) to reflect this.,,,,,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-002338,PT-6g2PcW,M980513,M980513,32.0,Academic lab,SIDM00177,CVCL_S675,MEL,Adult,Unknown,,Metastatic,lymph_node,Female,Sanger,,,M980513_SKIN,,,,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002339,PT-7caxyS,MOT,MOT,33.0,Academic lab,SIDM00623,CVCL_1439,HCL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,Sanger,,,MOT_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,,None,HCL,Hairy Cell Leukemia,Non-Hodgkin Lymphoma,Lymphoid +ACH-002340,PT-f8l4QO,NBSUSSR,NBSUSSR,18.0,Academic lab,SIDM00002,CVCL_1450,NBL,Adult,Adherent,,Primary,autonomic_ganglia,Male,Sanger,,RCB0803,NBSUSSR_AUTONOMIC_GANGLIA,,,,,Unknown,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002342,PT-ezsoUP,BB30PBL,BB30PBL,,Academic lab,,CVCL_VU86,ZMNOR,Unknown,Suspension,,,matched_normal_tissue,Female,Sanger,,,BB30PBL_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002343,PT-2UHafq,BB49EBV,BB49EBV,70.0,Academic lab,,CVCL_VU51,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,BB49EBV_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002344,PT-ySk3os,BB65EBV,BB65EBV,,Academic lab,,CVCL_6F66,ZMNOR,Unknown,Suspension,,,matched_normal_tissue,Male,Sanger,,,BB65EBV_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002345,PT-ORM06p,CaR-1,CAR1,70.0,Commercial,SIDM00488,CVCL_1116,READ,Adult,Adherent,,Metastatic,large_intestine,Male,JCRB,,JCRB0207,CAR1_LARGE_INTESTINE,,,,,,MF-015-001,None,READ,Rectal Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-002346,PT-eNOXVI,CP50EBV,CP50EBV,,Academic lab,SIDM01716,CVCL_UY79,ZMNOR,Unknown,Unknown,,,matched_normal_tissue,Male,Sanger,,,CP50EBV_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002347,PT-4V4zXY,CP66EBV,CP66EBV,,Academic lab,SIDM01715,CVCL_VU67,ZMNOR,Unknown,Unknown,,,matched_normal_tissue,Male,Sanger,,,CP66EBV_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002348,PT-zbNCyh,HSJD-DIPG-007,HSJDDIPG007,6.0,Academic lab,SIDM01714,CVCL_VU70,DIPG,Pediatric,Neurosphere,,Primary,brain,Unknown,"Hospital Sant Joan de Deu, Barcelona) received from University of Zurich ",,,DIPG007_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-032-002,None,DIPG,Diffuse Intrinsic Pontine Glioma,Diffuse Glioma,CNS/Brain +ACH-002349,PT-aHXCAf,GBM001,GBM001,,Academic lab,,,GB,Unknown,Unknown,,,matched_normal_tissue,Unknown,Sanger,,,GBM001_CENTRAL_NERVOUS_SYSTEM,,,,,,,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-002350,PT-ISixNE,HA7EBV,HA7EBV,,Academic lab,SIDM01711,CVCL_E909,ZMNOR,Unknown,Unknown,,,matched_normal_tissue,Male,Sanger,,,HA7EBV_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002351,PT-WBoaow,L542,L542,,Academic lab,,CVCL_VU88,ZMNOR,Unknown,Suspension,,,matched_normal_tissue,Female,Sanger,,,L542_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002352,PT-fygqZz,LB1047EBV,LB1047EBV,,Academic lab,,CVCL_E908,ZMNOR,Unknown,Suspension,,,matched_normal_tissue,Female,Sanger,,,LB1047EBV_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002353,PT-hcnphT,LB2241EBV,LB2241EBV,,Academic lab,,CVCL_VU68,ZMNOR,Unknown,Suspension,,,matched_normal_tissue,Male,Sanger,,,LB2241EBV_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002354,PT-g7qDcx,LB2518EBV,LB2518EBV,,Academic lab,,CVCL_E914,ZMNOR,Unknown,Suspension,,,matched_normal_tissue,Female,Sanger,,,LB2518EBV_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002355,PT-rIlRDz,LB373EBV,LB373EBV,,Academic lab,,CVCL_E917,ZMNOR,Unknown,Suspension,,,matched_normal_tissue,Female,Sanger,,,LB373EBV_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002356,PT-JQF9VX,LB647PBL,LB647PBL,,Academic lab,,CVCL_VU82,ZMNOR,Unknown,Suspension,,,matched_normal_tissue,Male,Sanger,,,LB647PBL_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002357,PT-4F46jD,LB771PBL,LB771PBL,,Academic lab,,CVCL_VU87,ZMNOR,Unknown,Suspension,,,matched_normal_tissue,Male,Sanger,,,LB771PBL_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002358,PT-Ymhhgy,LB831EBV,LB831EBV,65.0,Academic lab,,CVCL_E913,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Male,Sanger,,,LB831EBV_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002360,PT-PReW1L,MZ1B,MZ1B,46.0,Academic lab,SIDM01878,CVCL_VU73,ZMNOR,Adult,Unknown,,,matched_normal_tissue,Male,Sanger,,,MZ1B_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002361,PT-XDM0rA,MZ7B,MZ7B,25.0,Academic lab,SIDM01879,CVCL_VU72,ZMNOR,Adult,Unknown,,,matched_normal_tissue,Female,Sanger,,,MZ7B_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002362,PT-eS45m8,NCIBL128,NCIBL128,60.0,Academic lab,,CVCL_2636,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Male,Sanger,,,NCIBL128_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002363,PT-oKf5lW,NCIBL1395,NCIBL1395,55.0,Academic lab,SIDM00643,CVCL_2638,ZMNOR,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Female,Sanger,,,NCIBL1395_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002364,PT-KKsvGZ,NCIBL1437,NCIBL1437,60.0,Academic lab,,CVCL_2639,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Male,Sanger,,,NCIBL1437_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002365,PT-lWWpjR,NCIBL1770,NCIBL1770,57.0,Academic lab,SIDM00752,CVCL_2644,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Male,Sanger,,,NCIBL1770_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002366,PT-bwPYLi,NCIBL2009,NCIBL2009,68.0,Academic lab,SIDM00736,CVCL_2645,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,NCIBL2009_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002367,PT-TexA3V,NCIBL2052,NCIBL2052,65.0,Academic lab,SIDM00712,CVCL_2647,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Male,Sanger,,,NCIBL2052_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002368,PT-lYuNel,NCIBL2087,NCIBL2087,69.0,Academic lab,SIDM00707,CVCL_2648,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Male,Sanger,,,NCIBL2087_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002369,PT-DzY90c,NCIBL209,NCIBL209,55.0,Academic lab,SIDM00705,CVCL_2649,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Male,Sanger,,,NCIBL209_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002370,PT-6IoG5q,NCIBL2122,NCIBL2122,46.0,Academic lab,SIDM00701,CVCL_2651,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,NCIBL2122_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002371,PT-AOPcW9,NCIBL2126,NCIBL2126,65.0,Academic lab,SIDM00790,CVCL_2652,ZMNOR,Adult,Suspension,,,pleural_effusion,Male,Sanger,,,NCIBL2126_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002372,PT-NNs10U,NCIBL2171,NCIBL2171,50.0,Academic lab,SIDM00717,CVCL_2654,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Male,Sanger,,,NCIBL2171_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002373,PT-yKJqsn,HCC1187BL,HCC1187BL,41.0,Academic lab,SIDM00869,CVCL_1248,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,HCC1187_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002374,PT-ZerhVq,HCC1599BL,HCC1599BL,44.0,Academic lab,SIDM00876,CVCL_1257,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,HCC1599_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002375,PT-Vntr9y,HCC1937BL,HCC1937BL,24.0,Academic lab,SIDM00873,CVCL_3281,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,HCC1937_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002376,PT-XQHvQF,LS1034-PBL,LS1034PBL,54.0,Academic lab,,CVCL_VV29,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Male,Sanger,,,LS1034_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002377,PT-S4bLNM,HCC38BL,HCC38BL,50.0,Academic lab,SIDM00674,CVCL_1268,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,HCC38_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002378,PT-UPBMOO,HCC1143-BL,HCC1143BL,52.0,Academic lab,SIDM00868,CVCL_1246,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,HCC1143_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002379,PT-jGS2bl,J82EBV,J82EBV,58.0,Academic lab,,CVCL_5H97,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Male,Sanger,,,J82_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002380,PT-w6ABKA,COLO829BL,COLO829BL,45.0,Academic lab,SIDM00908,CVCL_1999,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Male,Sanger,,,COLO829_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002381,PT-vOaofa,HCC2157BL,HCC2157BL,48.0,Academic lab,SIDM00773,CVCL_1262,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,HCC2157_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002382,PT-8MisfZ,HCC1395BL,HCC1395BL,43.0,Academic lab,SIDM00883,CVCL_1250,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,HCC1395_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002383,PT-DxHqyx,HCC2218BL,HCC2218BL,38.0,Academic lab,SIDM00696,CVCL_1264,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,HCC2218_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002384,PT-603OA3,HCC1954BL,HCC1954BL,61.0,Academic lab,SIDM00871,CVCL_1260,ZMNOR,Adult,Suspension,,,matched_normal_tissue,Female,Sanger,,,HCC1954_MATCHED_NORMAL_TISSUE,,,,,,,None,,Matched Normal,Non-Cancerous,Normal +ACH-002386,PT-mDCwIk,M00921,M00921,64.0,Academic lab,SIDM00178,CVCL_S808,MEL,Adult,Unknown,,Metastatic,skin,Female,Sanger,,,M00921_SKIN,,,,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002387,PT-eN0Nme,M1203273,M1203273,,Academic lab,SIDM00013,CVCL_VS56,MEL,Unknown,Unknown,,Primary,skin,Unknown,Sanger,,,M1203273_SKIN,,,,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002388,PT-FieisY,MET2B,MET2B,,Academic lab,SIDM00221,CVCL_VS57,MEL,Unknown,Unknown,,Primary,skin,Unknown,Sanger,,,MET2B_SKIN,,,,,,,None,MEL,Melanoma,Melanoma,Skin +ACH-002389,PT-iObwE0,ACN,ACN,3.0,Academic lab,SIDM00057,CVCL_1068,NBL,Pediatric,Unknown,,Metastatic,bone_marrow,Male,Kim Stegmaier (DFCI),,,ACN_AUTONOMIC_GANGLIA,,,,,,,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002392,PT-V8LQ1n,SC-1,SC1,67.0,Academic lab,SIDM00400,CVCL_1888,FL,Adult,Suspension,,Metastatic,ascites,Male,Sanger,b_cell_follicular,ACC-558,SC1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,Unknown,,None,FL,Follicular Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002397,PT-ix8RHJ,KMH-2,KMHDASH2,71.0,,SIDM00619,CVCL_S641,THAP,Adult,Unknown,,,pleural_effusion,Male,,,,KMH2_THYROID,2054094.0,,,,,,None,THAP,Anaplastic Thyroid Cancer,Anaplastic Thyroid Cancer,Thyroid +ACH-002399,PT-iW8GZP,21NT,21NT,36.0,Academic lab,,CVCL_7933,IDC,Adult,Adherent,,Primary,breast,Female,Polyak (DFCI),,,21NT_BREAST,,,,,,MF-007-008,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002446,PT-i9nBPr,CCLF_UPGI_0005_T,CCLFUPGI0005T,70.0,CCLF,,CVCL_B4KV,STAD,Adult,Adherent,,Metastatic,pleural_cavity,Male,,,,CCLFUPGI0005T_STOMACH,,,,,Unknown,MF-001-001,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002458,PT-czDcsE,HT144 SKIN FV1,HT144SKINFV1,29.0,Academic lab,,CVCL_A1VJ,MEL,Adult,Adherent,,Metastatic,skin,Male,Paquita (Broad),,,HT144_SKIN_FV1_RESISTANT,,Drug resistance: Dabrafenib,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-002459,PT-czDcsE,HT144 SKIN FV3,HT144SKINFV3,29.0,Academic lab,,CVCL_A1VL,MEL,Adult,Adherent,,Metastatic,skin,Male,Paquita (Broad),,,HT144_SKIN_FV3_RESISTANT,,Drug resistance: Dabrafenib and Trametinib,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-002460,PT-czDcsE,HT144 SKIN FV2,HT144SKINFV2,29.0,Academic lab,,CVCL_A1VK,MEL,Adult,Adherent,,Metastatic,skin,Male,Paquita (Broad),,,HT144_SKIN_FV2_RESISTANT,,Drug resistance: Dabrafenib and Roxadustat,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-002461,PT-Zy2EsL,RVH421 SKIN FV1,RVH421SKINFV1,28.0,Academic lab,,CVCL_A1VM,MEL,Adult,Adherent,,Metastatic,central_nervous_system,Male,Paquita (Broad),,,RVH421_SKIN_FV1_RESISTANT,,Drug resistance: Dabrafenib,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-002462,PT-ml8vcL,RPE1-ss48,RPE1SS48,,Academic lab,,,ZIMMEPCRT,Unknown,Adherent,,,eye,Female,Uri Ben-David,,,RPE1SS48_ENGINEERED,,Near-diploid control,,,,MF-002-001,None,,"Immortalized Epithelial Cells, Retinal",Non-Cancerous,Eye +ACH-002463,PT-ml8vcL,RPE1-ss77,RPE1SS77,,Academic lab,,,ZIMMEPCRT,Unknown,Adherent,,,eye,Female,Uri Ben-David,,,RPE1SS77_ENGINEERED,,Near-diploid control,,,,MF-002-001,None,,"Immortalized Epithelial Cells, Retinal",Non-Cancerous,Eye +ACH-002464,PT-ml8vcL,RPE1-ss6,RPE1SS6,,Academic lab,,,ZIMMEPCRT,Unknown,Adherent,,,eye,Female,Uri Ben-David,,,RPE1SS6_ENGINEERED,,trisomic for chromosome 7,,,,MF-002-001,None,,"Immortalized Epithelial Cells, Retinal",Non-Cancerous,Eye +ACH-002465,PT-ml8vcL,RPE1-ss119,RPE1SS119,,Academic lab,,,ZIMMEPCRT,Unknown,Adherent,,,eye,Female,Uri Ben-David,,,RPE1SS119_ENGINEERED,,trisomic for chromosome 8,,,,MF-002-001,None,,"Immortalized Epithelial Cells, Retinal",Non-Cancerous,Eye +ACH-002466,PT-ml8vcL,RPE1-ss111,RPE1SS111,,Academic lab,,,ZIMMEPCRT,Unknown,Adherent,,,eye,Female,Uri Ben-David,,,RPE1SS111_ENGINEERED,,"trisomic for chromosomes 8, 9 and 18",,,,MF-002-001,None,,"Immortalized Epithelial Cells, Retinal",Non-Cancerous,Eye +ACH-002467,PT-ml8vcL,RPE1-ss51,RPE1SS51,,Academic lab,,,ZIMMEPCRT,Unknown,Adherent,,,eye,Female,Uri Ben-David,,,RPE1SS51_ENGINEERED,,trisomic for chromosomes 7 and 22,,,,MF-002-001,None,,"Immortalized Epithelial Cells, Retinal",Non-Cancerous,Eye +ACH-002471,PT-UbzBsY,PSS008,PSS008,17.0,Academic lab,,,OS,Pediatric,Adherent,,Primary,bone,Female,Sweet Cordero (UCSF),,,PSS008_BONE,,,,,,MF-002-001,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-002475,PT-gjpFPM,HAP1,HAP1,40.0,Commercial,,CVCL_Y019,CML,Adult,Adherent,,,bone_marrow,Male,Horizon Discovery,,,HAP1_ENGINEERED,,Engineered haploid line,,,,MF-005-001,None,CML,Chronic Myelogenous Leukemia,Myeloproliferative Neoplasms,Myeloid +ACH-002485,PT-NJ3wbw,MAVER-1,MAVER1,82.0,Commercial,,CVCL_1831,MCL,Adult,Suspension,,,haematopoietic_and_lymphoid_tissue,Male,ATCC,b_cell_mantle_cell,,MAVER1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE,,,,,,MF-001-001,None,MCL,Mantle Cell Lymphoma,Non-Hodgkin Lymphoma,Lymphoid +ACH-002486,PT-pyZjZu,MES-OV,MESOV,53.0,Commercial,,CVCL_CZ92,SOC,Adult,Adherent,,Primary,ascites,Female,ATCC,serous,,MESOV_OVARY,,,,,,MF-023-001,None,SOC,Serous Ovarian Cancer,Ovarian Epithelial Tumor,Ovary/Fallopian Tube +ACH-002508,PT-SogXKU,WM3211,WM3211,34.0,Academic lab,,CVCL_6797,ACRM,Adult,Adherent,,Metastatic,lymph_node,Female,Hayward (QIMRB),acral,,WM3211_SKIN,,,,,,MF-001-001,None,ACRM,Acral Melanoma,Melanoma,Skin +ACH-002509,PT-mVaoEC,WM4235,WM4235,,Academic lab,,CVCL_A1UG,ACRM,Unknown,Adherent,,Metastatic,skin,Unknown,Hayward (QIMRB),acral,,WM4235_SKIN,,,,,,MF-001-001,None,ACRM,Acral Melanoma,Melanoma,Skin +ACH-002510,PT-6g2PcW,M040416,M040416,54.0,Academic lab,,CVCL_A1UF,ACRM,Adult,Adherent,,Metastatic,skin,Male,Hayward (QIMRB),acral,,M040416_SKIN,,,,,,MF-001-001,None,ACRM,Acral Melanoma,Melanoma,Skin +ACH-002511,PT-iI63vt,M140325,M140325,64.0,Academic lab,,CVCL_A1UE,MEL,Adult,Adherent,,Primary,skin,Female,Hayward (QIMRB),mucosal,,M140325_SKIN,,,,,,MF-001-001,None,MEL,Melanoma,Melanoma,Skin +ACH-002512,PT-YwNqCa,MM160113,MM160113,86.0,Academic lab,,CVCL_B4KU,ACRM,Adult,Adherent,,Metastatic,skin,Male,Hayward (QIMRB),acral,,MM160113_SKIN,,,,,,MF-001-001,None,ACRM,Acral Melanoma,Melanoma,Skin +ACH-002523,PT-0yqjae,SNU-739,SNU739,52.0,Commercial,,CVCL_5088,HCC,Adult,Adherent,,Primary,liver,Male,KCLB,,,SNU739_LIVER,,,,,,MF-001-005,None,HCC,Hepatocellular Carcinoma,Hepatocellular Carcinoma,Liver +ACH-002526,PT-z0Yk96,SNU-1327,SNU1327,84.0,Commercial,,CVCL_5022,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Male,KCLB,NSCLC_adenocarcinoma,,SNU1327_LUNG,,,,,,MF-001-005,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-002531,PT-GWa6kp,SNU-2535,SNU2535,57.0,Commercial,,CVCL_R756,LUAD,Adult,Adherent,,Primary,pleural_effusion,Female,KCLB,,,SNU2535_LUNG,,,,,,MF-001-005,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-002647,PT-O1x5GT,CCC-5,CCC5,59.0,Commercial,,CVCL_LM83,CHOL,Adult,Adherent,,Metastatic,pleural_effusion,Male,DSMZ,,,CCC5_BILIARY_TRACT,,,,,,MF-008-001,None,CHOL,Cholangiocarcinoma,Intraductal Papillary Neoplasm of the Bile Duct,Biliary Tract +ACH-002650,PT-6fwwV7,ETCC-016,ETCC016,53.0,Commercial,,CVCL_Y086,LUAD,Adult,Adherent,,Metastatic,pleural_effusion,Male,DSMZ,NSCLC_adenocarcinoma,,ETCC016_LUNG,,,,,,MF-002-001,None,LUAD,Lung Adenocarcinoma,Non-Small Cell Lung Cancer,Lung +ACH-002654,PT-anuBoi,JVE-015,JVE015,66.0,Commercial,,CVCL_EG16,COAD,Adult,Adherent,,Primary,Colon,Female,DSMZ,,,JVE015_COLON,,,,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-002659,PT-btmPL5,JVE-127,JVE127,60.0,Commercial,,CVCL_EG22,MACR,Adult,Adherent,,Primary,Colon,Male,DSMZ,,,JVE127_COLON,,,,,,MF-001-001,None,MACR,Mucinous Adenocarcinoma of the Colon and Rectum,Colorectal Adenocarcinoma,Bowel +ACH-002664,PT-FT4DA3,JVE-253,JVE253,48.0,Commercial,,CVCL_EG28,MACR,Adult,Adherent,,Metastatic,liver,Female,DSMZ,,,JVE253_COLON,,,,,,MF-001-001,None,MACR,Mucinous Adenocarcinoma of the Colon and Rectum,Colorectal Adenocarcinoma,Bowel +ACH-002669,PT-53ZOQS,KP-363T,KP363T,80.0,Commercial,,CVCL_EG34,COAD,Adult,Adherent,,Primary,Colon,Male,DSMZ,,,KP363T_COLON,,,,,,MF-001-001,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-002672,PT-yBlD98,MAPAC-HS-77,MAPACHS77,64.0,Commercial,,CVCL_LM84,PAAD,Adult,Adherent,,Primary,pancreas,Male,DSMZ,,,MAPACHS77_PANCREAS,,,,,,MF-007-011,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-002680,PT-UACtvx,170-MG-BA,170MGBA,74.0,Commercial,,CVCL_LM81,GB,Adult,Adherent,,Primary,central_nervous_system,Female,DSMZ,glioblastoma,,170MGBA_CENTRAL_NERVOUS_SYSTEM,,,,,,MF-006-002,None,GB,Glioblastoma,Diffuse Glioma,CNS/Brain +ACH-002687,PT-VBCF1O,WM3772F,WM3772F,,Academic lab,,CVCL_0B81,UM,Unknown,Adherent,,Metastatic,lung,Female,"Rockland Immunochemicals, Inc., Received from Tak Ito",,,WM3772F_EYE,,,,,,MF-001-020,None,UM,Uveal Melanoma,Ocular Melanoma,Eye +ACH-002693,PT-DyxJsT,S462,S462,,Academic lab,,CVCL_1Y70,MPNST,Unknown,Adherent,NF1,Unknown,Unknown,Female,Ratner (Cincinnati Children's Hospital),,,S462_SOFT_TISSUE,,,,,,MF-002-001,None,MPNST,Malignant Peripheral Nerve Sheath Tumor,Nerve Sheath Tumor,Peripheral Nervous System +ACH-002710,PT-nQk25T,MPNST-724,MPNST724,,Academic lab,,CVCL_AU20,MPNST,Unknown,Adherent,,Primary,soft_tissue,Unknown,Ratner (Cincinnati Children's Hospital)/ Marino-Enriquez (BWH),,,MPNST724_SOFT_TISSUE,,,,,,MF-002-001,None,MPNST,Malignant Peripheral Nerve Sheath Tumor,Nerve Sheath Tumor,Peripheral Nervous System +ACH-002730,PT-LfJQoV,CCLF_UPGI_0009_T,CCLFUPGI0009T,59.0,CCLF,,,STAD,Adult,Organoid,,Metastatic,ascites,Male,,,,CCLFUPGI0009T_GASTRIC,,,,,,MF-031-002,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002733,PT-VvDCYY,CCLF_UPGI_0040_T,CCLFUPGI0040T,69.0,CCLF,,,STAD,Adult,Organoid,,Metastatic,ascites,Male,,,,,,,,,,MF-031-002,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002736,PT-ZTPIG1,CCLF_UPGI_0052_T,CCLFUPGI0052T,36.0,CCLF,,,DSTAD,Adult,Organoid,,Metastatic,pleural_cavity,Male,,,,,,,,,Post-treatment,MF-031-002,None,DSTAD,Diffuse Type Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002738,PT-V3207V,PANFR0420,PANFR0420,,Academic lab,,,PAAD,Unknown,Organoid,,Unknown,Unknown,Unknown,Sri (Broad),exocrine_adenocarcinoma,,,,Pancreas organoid,,,,MF-031-002,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-002742,PT-ZlbSbz,PANFR0233,PANFR0233,,Academic lab,,,PAAD,Unknown,Organoid,,Unknown,Unknown,Unknown,Sri (Broad),exocrine_adenocarcinoma,,,,,,,,MF-031-002,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-002743,PT-GQNnO1,PANFR0368,PANFR0368,,Academic lab,,,PAAD,Unknown,Organoid,,Unknown,Unknown,Unknown,Sri (Broad),exocrine_adenocarcinoma,,,,,,,,MF-031-002,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-002744,PT-0o7FOB,PANFR0402,PANFR0402,,Academic lab,,,PAAD,Unknown,Organoid,,Unknown,Unknown,Unknown,Sri (Broad),exocrine_adenocarcinoma,,,,,,,,MF-031-002,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-002745,PT-SAJ1yK,PANFR0069,PANFR0069,,Academic lab,,,PAAD,Unknown,Organoid,,Unknown,Unknown,Unknown,Sri (Broad),exocrine_adenocarcinoma,,,,,,,,MF-031-002,None,PAAD,Pancreatic Adenocarcinoma,Pancreatic Adenocarcinoma,Pancreas +ACH-002757,PT-EY7trN,CCLF_UPGI_0068_T,CCLFUPGI0068T,38.0,CCLF,,,STAD,Adult,Organoid,,Metastatic,lymph_node,Female,,,,,,,,,,MF-031-002,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002785,PT-6sPicj,NCC-LMS1-C1,NCCLMS1C1,42.0,Academic lab,,CVCL_LK56,LMS,Adult,Adherent,,Metastatic,bone,Female,Kondo (National Cancer Center Tokyo),,,,,Patient-derived model; Matches NCC-LMS1-X3-C1,,,,MF-007-006,None,LMS,Leiomyosarcoma,Leiomyosarcoma,Soft Tissue +ACH-002799,PT-qqzgSc,NCC-MPNST1-C1,NCCMPNST1C1,37.0,Academic lab,,CVCL_YU12,MPNST,Adult,Adherent,,Unknown,Unknown,Female,Kondo (National Cancer Center Tokyo),,,,,Patient-derived model,,,,MF-007-006,None,MPNST,Malignant Peripheral Nerve Sheath Tumor,Nerve Sheath Tumor,Peripheral Nervous System +ACH-002800,PT-WTpRkW,NCC-MPNST2-C1,NCCMPNST2C1,54.0,Academic lab,,CVCL_YU13,MPNST,Adult,Adherent,,Unknown,Unknown,Male,Kondo (National Cancer Center Tokyo),,,,,Patient-derived model,,,,MF-007-006,None,MPNST,Malignant Peripheral Nerve Sheath Tumor,Nerve Sheath Tumor,Peripheral Nervous System +ACH-002834,PT-EcUHFc,PSS131R,PSS131R,,Academic lab,,,OS,Unknown,Adherent,,Primary,bone,Female,Alejandro Sweet-Cordero (UCSF); passed to us from Lily Guenther,,,PSS131R_Osteosarcoma,,,,,,MF-002-001,None,OS,Osteosarcoma,Osteosarcoma,Bone +ACH-002835,PT-8JiqNz,CCLF_UPGI_0011_T,CCLFUPGI0011T,70.0,CCLF,,,ESCA,Adult,Organoid,,Metastatic,liver,Male,,,,,,,,,,MF-031-002,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002837,PT-M6KcwA,CCLF_UPGI_0015_T,CCLFUPGI0015T,65.0,CCLF,,,ESCA,Adult,Organoid,,Primary,esophagus,Male,,,,,,,,,Post-treatment,MF-031-002,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002839,PT-aXPS8n,CCLF_CORE_0002_T,CCLFCORE0002T,,CCLF,,,COAD,Unknown,Organoid,,Primary,Colon,Unknown,,,,,,,,,Unknown,MF-031-002,None,COAD,Colon Adenocarcinoma,Colorectal Adenocarcinoma,Bowel +ACH-002847,PT-AFnHpd,YUHOIN 06-50,YUHOIN0650,59.0,Academic lab,,CVCL_J521,MEL,Adult,Adherent,,Metastatic,sinonasal,Female,Halaban (Yale),,,YUHOIN0650_Melanoma_Skin,,,,,,MF-036-001,None,MEL,Melanoma,Melanoma,Skin +ACH-002871,PT-YrYvrU,CCLF_UPGI_0054_T,CCLFUPGI0054T,65.0,CCLF,,,ESCA,Adult,Organoid,,Metastatic,abdomen,Male,,,,,,,,,,MF-031-002,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002883,PT-N65Hvq,IPM-BO-053,IPMBO053,77.0,Academic lab,,,ILC,Adult,Organoid,,Metastatic,breast,Female,Adrian Lee (UPMC),,,,,,,,,MF-031-003,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002884,PT-N65Hvq,IPM-BO-055,IPMBO055,77.0,Academic lab,,,ILC,Adult,Organoid,,Metastatic,breast,Female,Adrian Lee (UPMC),,,,,,,,,MF-031-003,None,ILC,Breast Invasive Lobular Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002885,PT-pPJgGC,IPM-BO-056,IPMBO056,43.0,Academic lab,,,IDC,Adult,Organoid,,Primary,breast,Female,Adrian Lee (UPMC),,,,,,,,,MF-031-003,None,IDC,Breast Invasive Ductal Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002922,PT-LKZDpW,SK-N-MM,SKNMM,8.0,Academic lab,,,NBL,Pediatric,Adherent,,Metastatic,bone,Female,Icahn School of Medicine at Mount Sinai,,,SKNMM_BRAIN_BONE,,,,,,MF-001-001,None,NBL,Neuroblastoma,Neuroblastoma,Peripheral Nervous System +ACH-002926,PT-vu5jnE,UPMD1,UPMD1,,,,CVCL_C297,UM,Unknown,Unknown,,Primary,eye,Female,QIMRB Berghofer (via CRUK Manchester),uveal,,UPMD1_Melanoma_Eye,,,,,,MF-001-001,None,UM,Uveal Melanoma,Ocular Melanoma,Eye +ACH-002950,PT-hxORJf,NH93T,NH93T,,Academic lab,,,BRCA,Unknown,Organoid,,Primary,breast,Female,CSHL,ERneg_HER2neg,,,,,,,,MF-031-003,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002951,PT-URKT9Y,NH84T,NH84T,,Academic lab,,,BRCA,Unknown,Organoid,,Primary,breast,Female,CSHL,ERneg_HER2neg,,,,,,,,MF-031-003,None,BRCA,Invasive Breast Carcinoma,Invasive Breast Carcinoma,Breast +ACH-002954,PT-piVxVb,CCLF_UPGI_0012_T,CCLFUPGI0012T,51.0,CCLF,,,ESCA,Adult,Organoid,,Metastatic,abdomen,Male,,,,,,,,,Unknown,MF-031-002,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002967,PT-4KszW6,CCLF_UPGI_0036_T,CCLFUPGI0036T,75.0,CCLF,,,STAD,Adult,Organoid,,Metastatic,thoracic_cavity,Female,,,,,,,,,,MF-031-002,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002968,PT-pjhrsc,CCLF_UPGI_0041_T,CCLFUPGI0041T,53.0,CCLF,,,STAD,Adult,Organoid,,Metastatic,pleural_cavity,Male,,,,,,,,,,MF-031-002,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002972,PT-dkXZB1,CCLF_UPGI_0085_T,CCLFUPGI0085T,57.0,CCLF,,,STAD,Adult,Organoid,,Metastatic,pleural_cavity,Female,,,,,,,,,,MF-031-002,None,STAD,Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002979,PT-lyHTzo,CCLF_UPGI_0101_T,CCLFUPGI0101T,60.0,CCLF,,,DSTAD,Adult,Organoid,,Metastatic,stomach,Female,,diffuse_gastric,,,,,,,,MF-031-002,None,DSTAD,Diffuse Type Stomach Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-002981,PT-Z9akXf,CCLF_UPGI_0027_T,CCLFUPGI0027T,78.0,CCLF,,,ESCA,Adult,Organoid,,Metastatic,esophagus,Male,,,,,,,,,,MF-031-002,None,ESCA,Esophageal Adenocarcinoma,Esophagogastric Adenocarcinoma,Esophagus/Stomach +ACH-003071,PT-LAGmLq,NCI-H748,NCIH748,62.0,Commercial,,CVCL_1588,SCLC,Adult,Suspension,,Primary,lung,Male,ATCC,,CRL-5841,NCIH748_LUNG,,,,,,MF-001-001,None,SCLC,Small Cell Lung Cancer,Lung Neuroendocrine Tumor,Lung diff --git a/StrainID/utility_scripts/README.md b/StrainID/utility_scripts/README.md new file mode 100644 index 0000000..b573197 --- /dev/null +++ b/StrainID/utility_scripts/README.md @@ -0,0 +1,10 @@ + +### Model.csv +Downloaded from https://depmap.org/portal/download/all/?releasename=DepMap+Public+23Q2&filename=Model.csv on May 14, 2023 + + +### generate_hg38_VariantDB.sh +Download all DepMap (Broad) variants based on `Model.csv` accessions and cell line names. + +### generate_sacCer3_VariantDB.sh +Download all Song et al (2015) variants and perform BedTools intersect for unique substitutions (better uniquely characterize strain) and format into VCF files for StrainID. diff --git a/StrainID/utility_scripts/generate_hg38_VariantDB.sh b/StrainID/utility_scripts/generate_hg38_VariantDB.sh new file mode 100644 index 0000000..a358e6a --- /dev/null +++ b/StrainID/utility_scripts/generate_hg38_VariantDB.sh @@ -0,0 +1,499 @@ +#!/bin/bash + +# hg38 VCF database +# This script pulls the variant annotations from DepMap for all cell lines +# currently available and formats them into VCF files for StrainID runs on using +# hg38. + +# Required software: +# wget +# gzips + +usage() +{ + echo 'generate_hg38_VariantDB.sh' + echo 'eg: bash generate_hg38_VariantDB.sh' + exit +} + +[ -d hg38_DepMap ] || mkdir hg38_DepMap +[ -d CSV ] || mkdir CSV + +awk -F "," '{OFS="\t"}{print $1,$3,$4}' Model.csv | sed "1d" > CL_names.txt + +# Write hg38 header +cat > header.vcf <<- EndOfMessage +##fileformat=VCFv4.2 +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= +##contig= 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CSV/$NAME.csv https://depmap.org/portal/partials/data_table/download/mutation_by_cell_line?depmap_id=$ACH + echo $HEADER + cat header.vcf > hg38_DepMap/$NAME.vcf + sed "1d" CSV/$NAME.csv | awk -F"," '{OFS="\t"}{print $2,$3,".",$6,$7,"0","PASS"}' >> hg38_DepMap/$NAME.vcf +done < CL_names.txt + +rm header.vcf +rm CL_names.txt +rm -r CSV diff --git a/StrainID/utility_scripts/generate_sacCer3_VariantDB.sh b/StrainID/utility_scripts/generate_sacCer3_VariantDB.sh index b5e11fe..f8f7ed0 100644 --- a/StrainID/utility_scripts/generate_sacCer3_VariantDB.sh +++ b/StrainID/utility_scripts/generate_sacCer3_VariantDB.sh @@ -18,7 +18,7 @@ usage() { echo 'generate_sacCer3_VariantDB.sh' - echo 'eg: bash generate_sacCer3_GenomeAnnotation.sh' + echo 'eg: bash generate_sacCer3_VariantDB.sh' exit } diff --git a/paper/.gitignore b/paper/.gitignore index eb4c96a..f7389ad 100644 --- a/paper/.gitignore +++ b/paper/.gitignore @@ -33,9 +33,11 @@ SyntheticStrain/logs/*.err-* SyntheticStrain/logs/*.out-* SyntheticStrain/results/sacCer3* SyntheticStrain/results/hg19* -ENCODE_CellLines/results/BAM -ENCODE_CellLines/results/BAM-nospike -ENCODE_CellLines/results/ID +ENCODEdata-CellLines/results/SupplementaryTable10.txt +ENCODEdata-CellLines/results/BAM +ENCODEdata-CellLines/results/BAM-nospike +ENCODEdata-CellLines/results/ID +ENCODEdata-CellLines/results/hg38_ID BY4742-chipseq/logs/*.out BY4742-chipseq/logs/*.err BY4742-chipseq/results/FASTQ diff --git a/paper/ENCODEdata-CellLines/230612_hg38_100-TF-ChIP-seq.txt b/paper/ENCODEdata-CellLines/230612_hg38_100-TF-ChIP-seq.txt new file mode 100644 index 0000000..d7a5e66 --- /dev/null +++ b/paper/ENCODEdata-CellLines/230612_hg38_100-TF-ChIP-seq.txt @@ -0,0 +1,102 @@ +2023-06-12 16:07:53.361847 https://www.encodeproject.org/report/?type=File&assembly=GRCh38&assay_title=TF+ChIP-seq&file_format=bam&output_type=alignments&biosample_ontology.term_name=K562&biosample_ontology.term_name=A549&biosample_ontology.term_name=MCF-7&biosample_ontology.term_name=HeLa-S3&biosample_ontology.term_name=SK-N-SH&biosample_ontology.term_name=HCT116&limit=all +ID Title Accession Dataset Genome assembly Technical replicates Biological replicates File Format File type File format type File size Assay term name Biosample name Organ Simple biosample summary Batch Target label Download URL Derived from Genome annotation Library Paired end identifier Paired with Preferred Default Run type Read length Mapped read length (nt) Cropped read length (nt) Cropped read length tolerance (nt) Mapped run type for bam files Read length units Output category Output type Index of QC Metric Lab Project Analysis step run Date created Analysis step version Restricted file Submitter comment Status Annotation type Annotation subtype Biochemical activity Encyclopedia version +/files/ENCFF353YHJ/ ENCFF353YHJ ENCFF353YHJ /experiments/ENCSR701TCU/ GRCh38 1_1 1 bam bam 731297869 ChIP-seq A549 lung /biosamples/ENCBS121DKS/ CEBPB /files/ENCFF353YHJ/@@download/ENCFF353YHJ.bam /files/ENCFF110MCL/,/files/ENCFF747LHY/ 51 51 2 single-ended nt alignment alignments /chip-library-quality-metrics/080ad810-b7b1-4908-91ef-d181d3bf2d97/,/chip-alignment-quality-metrics/3f77d9f0-2326-44e3-a77f-98eda0e98f11/,/chip-alignment-enrichment-quality-metrics/43b73b3d-ddd4-4178-b0e0-2685f8cc3ca0/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/7679583b-5ceb-4bd0-a832-399ff2c16fa5/ 2020-12-31T17:24:08.125644+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF473GBW/ ENCFF473GBW ENCFF473GBW /experiments/ENCSR000BMR/ GRCh38 1_1 1 bam bam 989403170 ChIP-seq K562 blood,bodily fluid /biosamples/ENCBS109ENC/ POLR2A /files/ENCFF473GBW/@@download/ENCFF473GBW.bam /files/ENCFF110MCL/,/files/ENCFF000QDX/ 36 36 2 single-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/1def3d2b-f7b0-4fb0-bd37-25f053d96567/,/chip-alignment-quality-metrics/88872573-a02f-4d31-af15-4db35f34e704/,/chip-library-quality-metrics/7a1b024a-1e18-406b-8db2-7eb085ac7a40/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/60599f41-ce31-41f2-917c-7d844a034247/ 2020-12-28T01:35:53.980847+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF780QTR/ ENCFF780QTR ENCFF780QTR /experiments/ENCSR000BUC/ GRCh38 2_1 2 bam bam 1086145055 ChIP-seq A549 lung /biosamples/ENCBS164AAA/ RAD21 /files/ENCFF780QTR/@@download/ENCFF780QTR.bam /files/ENCFF000NFN/,/files/ENCFF110MCL/ 50 50 2 single-ended nt alignment alignments /chip-library-quality-metrics/761023ea-5edc-4be4-ac76-5a0ffe41393b/,/chip-alignment-quality-metrics/e16e7e37-e25f-48c8-9edb-3a4a7729eb9f/,/chip-alignment-enrichment-quality-metrics/e95462a6-9381-4c31-b6ab-ac84b8095eeb/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/5252dda3-b9ae-4d60-b3ff-77ad859cb2f4/ 2020-12-27T07:03:03.373969+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF461LXW/ ENCFF461LXW ENCFF461LXW /experiments/ENCSR442VBJ/ GRCh38 1_1 1 bam bam 3273804089 ChIP-seq MCF-7 mammary gland,epithelium,exocrine gland /biosamples/ENCBS345ZJP/ RAD51 /files/ENCFF461LXW/@@download/ENCFF461LXW.bam /files/ENCFF687ONI/,/files/ENCFF110MCL/,/files/ENCFF501ZOW/ 100 100 2 paired-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/4b52441c-8bc7-40d1-984c-383e00e90f4e/,/chip-alignment-quality-metrics/fb5ecdb5-2d30-423e-9259-e9a14985c8e1/,/chip-library-quality-metrics/a7dcdcb4-17fc-4664-82a9-f1ae24f30ffe/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/b3a94d50-1d80-4f24-8ffa-757d3d4fc811/ 2020-12-30T13:34:39.327974+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF016THF/ ENCFF016THF ENCFF016THF /experiments/ENCSR000BRQ/ GRCh38 1_1 1 bam bam 1198263015 ChIP-seq K562 blood,bodily fluid /biosamples/ENCBS109ENC/ CEBPB /files/ENCFF016THF/@@download/ENCFF016THF.bam /files/ENCFF110MCL/,/files/ENCFF000PXH/ 36 36 2 single-ended nt alignment alignments /chip-library-quality-metrics/8088b341-829b-4f79-a99c-c9ab61eb91cf/,/chip-alignment-enrichment-quality-metrics/92cf41fc-dd2b-4c02-9965-19bb38ec2f3d/,/chip-alignment-quality-metrics/ec1af4f6-31a2-486b-ac6d-4db15adf22dc/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/190dc415-fa6a-4321-990f-0ed9b16b0ba0/ 2020-12-27T08:40:50.380513+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF705YAH/ ENCFF705YAH ENCFF705YAH /experiments/ENCSR796ITY/ GRCh38 2_1 2 bam bam 5938501472 ChIP-seq K562 blood,bodily fluid /biosamples/ENCBS357NWO/ NFIC /files/ENCFF705YAH/@@download/ENCFF705YAH.bam /files/ENCFF456ASW/,/files/ENCFF110MCL/,/files/ENCFF439DZE/ 100 100 2 paired-ended nt alignment alignments 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/analysis-step-runs/190dc415-fa6a-4321-990f-0ed9b16b0ba0/ 2020-12-27T08:40:53.006426+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF343VTX/ ENCFF343VTX ENCFF343VTX /experiments/ENCSR000BMF/ GRCh38 1_1 1 bam bam 430529423 ChIP-seq SK-N-SH brain treated with 6 μM all-trans-retinoic acid for 48 hours /biosamples/ENCBS404ENC/ USF1 /files/ENCFF343VTX/@@download/ENCFF343VTX.bam /files/ENCFF000RGQ/,/files/ENCFF110MCL/ 36 36 2 single-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/1de5150f-4297-4a8e-98a3-1a9c6ab8fc2d/,/chip-library-quality-metrics/da98d7c6-b45a-4337-a945-6523e757264c/,/chip-alignment-quality-metrics/b575e735-2809-4fc8-8e91-fd4ab14217e2/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/bc04079f-d7e7-498c-9a76-83114b801398/ 2020-12-27T11:08:26.690428+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF253KUT/ ENCFF253KUT ENCFF253KUT /experiments/ENCSR447ZMS/ GRCh38 3_1 3 bam bam 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ENCODE /analysis-step-runs/47b8760e-842d-4b5d-8d29-01c214b3dd95/ 2021-01-01T02:29:00.782273+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF694PCO/ ENCFF694PCO ENCFF694PCO /experiments/ENCSR948JXU/ GRCh38 1_1 1 bam bam 663739474 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 5 hours /biosamples/ENCBS133IJF/ BCL3 /files/ENCFF694PCO/@@download/ENCFF694PCO.bam /files/ENCFF110MCL/,/files/ENCFF216JQO/ 51 51 2 single-ended nt alignment alignments /chip-library-quality-metrics/75ee2ed8-fa00-48dd-84c9-c8e37558acf1/,/chip-alignment-enrichment-quality-metrics/9555e964-1c3d-489a-9b2e-1f4077bc2841/,/chip-alignment-quality-metrics/62e8a650-9a07-4db1-a07f-003c6ae16e1c/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/bea4f443-6021-4ecd-9ef9-50347e737c9f/ 2021-01-01T21:03:22.781138+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF040NIB/ ENCFF040NIB ENCFF040NIB /experiments/ENCSR904OTM/ GRCh38 3_1 3 bam bam 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2021-01-01T01:37:48.897800+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF570IMA/ ENCFF570IMA ENCFF570IMA /experiments/ENCSR090RGB/ GRCh38 2_1 2 bam bam 759014420 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 10 hours /biosamples/ENCBS202SSL/ JUN /files/ENCFF570IMA/@@download/ENCFF570IMA.bam /files/ENCFF984CIU/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/b9003290-240f-48e1-998f-bc46f1245224/,/chip-library-quality-metrics/5918e605-f293-4e87-bddf-1c2eb3adf582/,/chip-alignment-quality-metrics/ea2c2f5e-543f-4860-997b-5e817d4817ed/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/432fe8ae-68e2-4665-88b1-2798fd6e19c6/ 2021-01-01T02:59:36.816223+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF562GXC/ ENCFF562GXC ENCFF562GXC /experiments/ENCSR090RGB/ GRCh38 1_1 1 bam bam 778602005 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 10 hours /biosamples/ENCBS047ROF/ JUN /files/ENCFF562GXC/@@download/ENCFF562GXC.bam /files/ENCFF482ITW/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/ff017eba-ff57-4c5c-b9dc-b522e03a093b/,/chip-library-quality-metrics/238bf3b8-5490-4fec-90ba-c6015ce6b400/,/chip-alignment-enrichment-quality-metrics/4f364859-116c-4545-8626-a4846f1aee82/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/432fe8ae-68e2-4665-88b1-2798fd6e19c6/ 2021-01-01T02:59:34.536326+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF296JVB/ ENCFF296JVB ENCFF296JVB /experiments/ENCSR186IQL/ GRCh38 1_1 1 bam bam 558310718 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 6 hours /biosamples/ENCBS726LXJ/ BCL3 /files/ENCFF296JVB/@@download/ENCFF296JVB.bam /files/ENCFF436EYQ/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments 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ENCODE /analysis-step-runs/7175f43e-4b87-4395-b7d7-58b16a7064ec/ 2021-01-01T04:14:28.625155+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF081LRD/ ENCFF081LRD ENCFF081LRD /experiments/ENCSR070VXO/ GRCh38 3_1 3 bam bam 867935443 ChIP-seq A549 lung treated with 100.0 nM dexamethasone (agonist) for 25.0 minutes /biosamples/ENCBS620RNZ/ NR3C1 /files/ENCFF081LRD/@@download/ENCFF081LRD.bam /files/ENCFF110MCL/,/files/ENCFF296EUC/ 51 51 2 single-ended nt alignment alignments /chip-library-quality-metrics/ac2df210-4beb-42d5-acfc-1c89f82fdef9/,/chip-alignment-quality-metrics/2e4e9c57-8a2c-4b1a-9f05-77cefef28bab/,/chip-alignment-enrichment-quality-metrics/0351aed8-0ef7-4eff-ab71-a43467858d42/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/4cf1b060-3fb7-46f7-bee6-2bf321ffc479/ 2021-01-01T03:25:19.973405+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF521PBZ/ ENCFF521PBZ ENCFF521PBZ /experiments/ENCSR192PBJ/ GRCh38 3_1 3 bam bam 893320879 ChIP-seq A549 lung /biosamples/ENCBS095SEF/ JUN /files/ENCFF521PBZ/@@download/ENCFF521PBZ.bam /files/ENCFF110MCL/,/files/ENCFF619NSS/ 51 51 2 single-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/c6a1ee7c-1129-49ed-9b14-79ba1d0adffa/,/chip-alignment-quality-metrics/46df1b4d-3177-40d1-81a9-cacad0e6d6a1/,/chip-library-quality-metrics/d5a64e0a-18dd-4817-b2ae-f0d0efe0e584/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/0beb880a-a0b7-4636-bd0f-bed79d7ae606/ 2020-12-31T23:51:21.394141+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF117LFB/ ENCFF117LFB ENCFF117LFB /experiments/ENCSR242EWU/ GRCh38 2_1 2 bam bam 555761012 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 8 hours /biosamples/ENCBS790ILW/ FOSL2 /files/ENCFF117LFB/@@download/ENCFF117LFB.bam /files/ENCFF110MCL/,/files/ENCFF820LTK/ 51 51 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/94d604bb-cd5b-4cbc-9320-8e173f5d6d7d/,/chip-alignment-enrichment-quality-metrics/e810aa97-8459-4b6c-b159-105ad79618d4/,/chip-library-quality-metrics/8f3d65c4-e396-4fb0-a4e0-d5c2d54fcee4/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/d65c7ff6-c1d2-4635-8b26-932bbc8509a0/ 2020-12-31T22:40:52.103560+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF147DIE/ ENCFF147DIE ENCFF147DIE /experiments/ENCSR425MXK/ GRCh38 3_1 3 bam bam 617605449 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 6 hours /biosamples/ENCBS496OVY/ HES2 /files/ENCFF147DIE/@@download/ENCFF147DIE.bam /files/ENCFF685EMQ/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/33928b96-8413-4d02-a623-80f18011e1ec/,/chip-alignment-enrichment-quality-metrics/1b895302-1503-4378-afea-acd3aee543aa/,/chip-library-quality-metrics/63af76da-b50a-4d9c-a0a8-7fd05bdd770a/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/1551256e-8684-43d3-a865-c7d6303c6ca7/ 2020-12-31T20:15:56.840029+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF384DQE/ ENCFF384DQE ENCFF384DQE /experiments/ENCSR047EVQ/ GRCh38 2_1 2 bam bam 667760524 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 3 hours /biosamples/ENCBS935QKL/ EP300 /files/ENCFF384DQE/@@download/ENCFF384DQE.bam /files/ENCFF802DLN/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/13301cd3-08e0-4924-8897-73518b8a9e31/,/chip-alignment-quality-metrics/6691c299-cfad-4e6f-a225-91ef80f48cf7/,/chip-library-quality-metrics/1ca57594-990e-456f-977f-a93dfe470435/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/f27a4e1d-1432-4361-8305-582f3a0135ea/ 2021-01-01T04:04:52.513107+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF142SCH/ ENCFF142SCH ENCFF142SCH /experiments/ENCSR216GEB/ GRCh38 2_1 2 bam bam 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/analysis-step-runs/cdeba321-2579-438f-b364-6a4afdb552f3/ 2021-01-01T21:31:56.518647+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF134DOJ/ ENCFF134DOJ ENCFF134DOJ /experiments/ENCSR358ELZ/ GRCh38 1_1 1 bam bam 751062208 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 1 hour /biosamples/ENCBS537JEP/ EP300 /files/ENCFF134DOJ/@@download/ENCFF134DOJ.bam /files/ENCFF922NFJ/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/20022e1c-4baa-43aa-a2e8-4811251814a2/,/chip-alignment-quality-metrics/265b9a86-518d-44b1-8af9-5f6057a37f11/,/chip-library-quality-metrics/04fe4b62-ef17-45e1-a3e2-6a4d5d6cb8d8/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/82cc7d48-ae21-45d2-96e5-03beafa46f7b/ 2020-12-31T20:28:02.207769+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF970BHF/ ENCFF970BHF ENCFF970BHF /experiments/ENCSR000EZC/ GRCh38 3_1 3 bam bam 194528000 ChIP-seq HeLa-S3 uterus,epithelium /biosamples/ENCBS637AAA/ SMARCA4 /files/ENCFF970BHF/@@download/ENCFF970BHF.bam /files/ENCFF110MCL/,/files/ENCFF000XBJ/ 28 28 2 single-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/08832baa-da80-45a2-8655-d5014f87d043/,/chip-library-quality-metrics/f3f52ec9-a0c8-4ed4-903c-fb392f21db33/,/chip-alignment-quality-metrics/57d8b2c8-2c34-4014-bd09-407b6f300545/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/213d2dae-aa2d-4207-8d13-70b4b3e44711/ 2021-01-01T21:54:23.583245+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF968GNI/ ENCFF968GNI ENCFF968GNI /experiments/ENCSR358ELZ/ GRCh38 3_1 3 bam bam 406456685 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 1 hour /biosamples/ENCBS388ADX/ EP300 /files/ENCFF968GNI/@@download/ENCFF968GNI.bam /files/ENCFF950LBR/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments 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660506040 ChIP-seq HeLa-S3 uterus,epithelium /biosamples/ENCBS637AAA/ ELK1 /files/ENCFF336STH/@@download/ENCFF336STH.bam /files/ENCFF000XDR/,/files/ENCFF110MCL/ 27 27 2 single-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/e0f67a84-6fee-444e-affd-31eb3deca3a8/,/chip-alignment-quality-metrics/834a49c8-dc9c-4ad3-b82a-03f3af80caa9/,/chip-library-quality-metrics/5eec748c-1f5c-4950-8bb6-6a153caa3c98/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/e4917a82-9344-4af8-a9e1-f804c622adff/ 2021-01-02T00:20:56.358329+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF902OAH/ ENCFF902OAH ENCFF902OAH /experiments/ENCSR103UVU/ GRCh38 2_1 2 bam bam 622741759 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 3 hours /biosamples/ENCBS036LKM/ FOSL2 /files/ENCFF902OAH/@@download/ENCFF902OAH.bam /files/ENCFF110MCL/,/files/ENCFF525UUW/ 51 51 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/5850bd1a-b506-47c9-9c56-46d50d63f3c2/,/chip-alignment-enrichment-quality-metrics/6c09a8f8-fa5e-4ff0-a514-c89f27e07fa5/,/chip-library-quality-metrics/7750597d-7b0b-4cbd-ba5c-4c919f34cd9e/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/0ac450a1-594d-49fc-b795-adbaef0869c4/ 2021-01-01T02:49:27.574544+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF171EOT/ ENCFF171EOT ENCFF171EOT /experiments/ENCSR871NPV/ GRCh38 3_1 3 bam bam 961161243 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 3 hours /biosamples/ENCBS438XGI/ JUNB /files/ENCFF171EOT/@@download/ENCFF171EOT.bam /files/ENCFF314BPS/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/27f20676-6a57-4255-9fdc-eaf57c2da5af/,/chip-alignment-enrichment-quality-metrics/e967ae80-89c3-4de7-96d3-af16e400da41/,/chip-library-quality-metrics/9f96b877-5af6-4ebd-8de7-31fd7304cae1/ ENCODE Processing Pipeline ENCODE 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ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 7 hours /biosamples/ENCBS944BMM/ BCL3 /files/ENCFF353IXT/@@download/ENCFF353IXT.bam /files/ENCFF159QUQ/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/a291f854-b0e5-4843-8c7f-2b73ed0a27e4/,/chip-library-quality-metrics/3f570071-53dd-4a29-8c74-1a8283e1b65a/,/chip-alignment-enrichment-quality-metrics/86e7c3f9-54f1-4aeb-bb5b-df85e248747b/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/9d92b5e5-a924-4943-84cf-1d9b51b19676/ 2021-01-02T05:45:59.309688+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF800AIV/ ENCFF800AIV ENCFF800AIV /experiments/ENCSR501LQA/ GRCh38 3_1 3 bam bam 547831132 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 6 hours /biosamples/ENCBS909XAR/ SMC3 /files/ENCFF800AIV/@@download/ENCFF800AIV.bam /files/ENCFF108QVZ/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments 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/analysis-step-runs/ac8a02c5-7f99-4dd3-aa80-9862f0d66b30/ 2021-01-02T02:05:24.940018+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF934NVA/ ENCFF934NVA ENCFF934NVA /experiments/ENCSR807WAC/ GRCh38 1_1 1 bam bam 1159509530 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 3 hours /biosamples/ENCBS465PUD/ RAD21 /files/ENCFF934NVA/@@download/ENCFF934NVA.bam /files/ENCFF110MCL/,/files/ENCFF786MDO/ 51 51 2 single-ended nt alignment alignments /chip-library-quality-metrics/2d9e3a61-733e-436d-8552-ece11067b16f/,/chip-alignment-quality-metrics/80e142e6-f188-4a76-afbf-6404f557987c/,/chip-alignment-enrichment-quality-metrics/cfa66937-36f5-4b12-a3b9-086e6832f790/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/d4e865c8-8a4f-4672-80c0-e8400cce853a/ 2021-01-03T08:10:43.194123+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF705SCW/ ENCFF705SCW ENCFF705SCW /experiments/ENCSR000EDE/ GRCh38 1_1 1 bam bam 507031655 ChIP-seq HeLa-S3 uterus,epithelium /biosamples/ENCBS637AAA/ RAD21 /files/ENCFF705SCW/@@download/ENCFF705SCW.bam /files/ENCFF000XKS/,/files/ENCFF110MCL/ 27 27 2 single-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/7858cdf6-4ed9-4688-a09b-08eb5a36c814/,/chip-library-quality-metrics/eee05f0f-72a5-4412-8352-00057578e65d/,/chip-alignment-quality-metrics/880ebe72-3660-4188-9d3b-9674339ad6d7/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/b14ffaa8-fb7a-48dc-9004-9ff6afbe3151/ 2021-01-02T00:04:28.302099+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF240EFY/ ENCFF240EFY ENCFF240EFY /experiments/ENCSR000DLM/ GRCh38 1_1 1 bam bam 246404235 ChIP-seq HeLa-S3 uterus,epithelium /biosamples/ENCBS646PGB/ POLR2A /files/ENCFF240EFY/@@download/ENCFF240EFY.bam /files/ENCFF110MCL/,/files/ENCFF000RTM/ 35 35 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/387a011a-77a8-47ff-9cc2-ae2fe3e0aea8/,/chip-library-quality-metrics/ad60f350-6479-4f39-b76e-066d7086fc52/,/chip-alignment-enrichment-quality-metrics/ae8b3b4c-7e36-4eec-8668-370ab3f75a5d/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/ac8a02c5-7f99-4dd3-aa80-9862f0d66b30/ 2021-01-02T02:05:22.372024+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF535AQG/ ENCFF535AQG ENCFF535AQG /experiments/ENCSR708DGM/ GRCh38 2_1 2 bam bam 699885271 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 4 hours /biosamples/ENCBS587DMY/ JUN /files/ENCFF535AQG/@@download/ENCFF535AQG.bam /files/ENCFF040MIZ/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments /chip-library-quality-metrics/a9f0e940-7968-435b-a810-e3722af1ab9c/,/chip-alignment-quality-metrics/33da4e2b-a9f8-49b2-b59d-e906b73740dc/,/chip-alignment-enrichment-quality-metrics/fa0bf54d-dbca-4079-9da9-f7dc1ab042c4/ ENCODE Processing Pipeline ENCODE 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845834489 ChIP-seq A549 lung treated with 100.0 nM dexamethasone (agonist) for 5.0 minutes /biosamples/ENCBS407XHO/ EP300 /files/ENCFF445KAQ/@@download/ENCFF445KAQ.bam /files/ENCFF110MCL/,/files/ENCFF149ZSR/ 51 51 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/f3977ca8-c09b-4c54-ab3b-4ff035607962/,/chip-alignment-enrichment-quality-metrics/9527e6a6-40e5-4452-a30c-47ac1c00d736/,/chip-library-quality-metrics/bd199477-837f-4cae-a986-00bfa54db22c/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/1681b3bd-6b1b-445a-a5bb-bcdec746488c/ 2021-01-02T05:08:46.616003+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF730FGC/ ENCFF730FGC ENCFF730FGC /experiments/ENCSR535HFQ/ GRCh38 2_1 2 bam bam 580867531 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 6 hours /biosamples/ENCBS006JGY/ FOSL2 /files/ENCFF730FGC/@@download/ENCFF730FGC.bam /files/ENCFF110MCL/,/files/ENCFF220ZNM/ 51 51 2 single-ended nt alignment alignments 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ENCODE /analysis-step-runs/8039c5ce-8ef3-4721-be25-b8d8cc7d5c51/ 2021-01-02T07:46:51.441892+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF996XXS/ ENCFF996XXS ENCFF996XXS /experiments/ENCSR458VTP/ GRCh38 2_1 2 bam bam 750511973 ChIP-seq A549 lung treated with 100.0 nM dexamethasone (agonist) for 20.0 minutes /biosamples/ENCBS686ZWW/ NR3C1 /files/ENCFF996XXS/@@download/ENCFF996XXS.bam /files/ENCFF110MCL/,/files/ENCFF287HHY/ 51 51 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/634bcc87-7a4e-4e4a-a039-f6843dc97dd4/,/chip-alignment-enrichment-quality-metrics/a1b1dc80-16c8-424d-92a1-b828e8e08b54/,/chip-library-quality-metrics/169ccd71-5658-4c84-804d-ffcead1846e3/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/8039c5ce-8ef3-4721-be25-b8d8cc7d5c51/ 2021-01-02T07:46:54.095825+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF456UOX/ ENCFF456UOX ENCFF456UOX /experiments/ENCSR691GRA/ GRCh38 3_1 3 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ChIP-seq A549 lung /biosamples/ENCBS164AAA/ GATA3 /files/ENCFF253KCH/@@download/ENCFF253KCH.bam /files/ENCFF000NBH/,/files/ENCFF110MCL/ 50 50 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/19d30f4d-5f41-4a89-afd3-ce4fb87ba38e/,/chip-library-quality-metrics/3d393d08-0fc1-40ff-8a83-a0c6956c8fcb/,/chip-alignment-enrichment-quality-metrics/33976591-10a4-4c55-ab92-723d032902d5/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/c0583249-78bd-4b4f-82fd-3691b66ad76b/ 2021-01-05T20:07:38.403970+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF231YBR/ ENCFF231YBR ENCFF231YBR /experiments/ENCSR770OTI/ GRCh38 1_1 1 bam bam 777175791 ChIP-seq A549 lung treated with 100 nM dexamethasone (agonist) for 2 hours /biosamples/ENCBS313YTO/ EP300 /files/ENCFF231YBR/@@download/ENCFF231YBR.bam /files/ENCFF466JAI/,/files/ENCFF110MCL/ 51 51 2 single-ended nt alignment alignments 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/analysis-step-runs/5e36abe5-5cde-4500-b43c-f54be2a1bb55/ 2021-01-02T03:46:56.782085+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF685TWY/ ENCFF685TWY ENCFF685TWY /experiments/ENCSR000BQP/ GRCh38 1_1 1 bam bam 1277134112 ChIP-seq A549 lung treated with 0.02 percent ethanol for 1 hour /biosamples/ENCBS423ENC/ REST /files/ENCFF685TWY/@@download/ENCFF685TWY.bam /files/ENCFF000NDY/,/files/ENCFF110MCL/ 36 36 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/132bf9db-a82c-4b30-92ec-77a36ada2e5b/,/chip-alignment-enrichment-quality-metrics/67e9f09e-6527-443c-87ee-f82c4adcc955/,/chip-library-quality-metrics/fe19b52a-a996-4240-bae5-3bf5130eca04/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/aaee988c-bdf3-4950-bff0-cc38c565c3bf/ 2021-01-05T20:23:05.596553+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF757WYD/ ENCFF757WYD ENCFF757WYD /experiments/ENCSR690GUG/ GRCh38 1_1 1 bam bam 567595637 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ENCODE /analysis-step-runs/4e5bd512-5dcc-44b3-b0cf-b29be2139fae/ 2020-12-03T14:27:54.363530+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF126YFU/ ENCFF126YFU ENCFF126YFU /experiments/ENCSR479QAJ/ GRCh38 1_1 1 bam bam 425293852 ChIP-seq K562 blood,bodily fluid /biosamples/ENCBS425BSQ/ U2AF2 /files/ENCFF126YFU/@@download/ENCFF126YFU.bam /files/ENCFF110MCL/,/files/ENCFF246FAV/ 40 40 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/eb1956b5-4f18-41d8-834d-bd0dca0b7851/,/chip-alignment-enrichment-quality-metrics/d66060e5-6454-45c9-8535-036aff3008ea/,/chip-library-quality-metrics/c33bd804-ce11-464e-95e9-4432632b33be/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/e6e34971-bbba-4ea1-b876-0c80f432d414/ 2020-12-03T22:53:35.233942+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF555MUX/ ENCFF555MUX ENCFF555MUX /experiments/ENCSR574XEO/ GRCh38 1_1 1 bam bam 4418378301 ChIP-seq K562 blood,bodily 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Processing Pipeline ENCODE /analysis-step-runs/d559d0ba-aa82-44ac-b99c-8e308f740a57/ 2020-12-03T10:51:50.189253+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF687FQH/ ENCFF687FQH ENCFF687FQH /experiments/ENCSR194IJN/ GRCh38 2_1 2 bam bam 1177417678 ChIP-seq K562 blood,bodily fluid genetically modified (insertion) using CRISPR targeting H. sapiens ZNF766 /biosamples/ENCBS605NSN/ ZNF766 /files/ENCFF687FQH/@@download/ENCFF687FQH.bam /files/ENCFF862UUB/,/files/ENCFF734FMD/,/files/ENCFF110MCL/ 50 50 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/0d635c43-2b6a-4313-bcc6-cf8f99472f19/,/chip-alignment-enrichment-quality-metrics/0a294b94-478c-479b-8d49-f28d0e0d888a/,/chip-library-quality-metrics/f0e129ac-88a2-4c58-86e7-2a409c2db51e/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/fcade84a-4981-4dc7-a6a1-ce512dd02461/ 2020-12-04T07:22:49.020735+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released 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fluid /biosamples/ENCBS719UQU/ RNF2 /files/ENCFF942CBD/@@download/ENCFF942CBD.bam /files/ENCFF470MPB/,/files/ENCFF742JMT/,/files/ENCFF110MCL/ 100 100 2 paired-ended nt alignment alignments /chip-library-quality-metrics/124c3f84-9fdb-4a87-9595-6efbe34dbdb0/,/chip-alignment-quality-metrics/92c4c55c-89da-46d6-95f8-bc1c6e589b74/,/chip-alignment-enrichment-quality-metrics/c263f987-25f4-493f-8a97-21ef1a00beb0/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/0672d269-ef7b-411d-b329-4a3435eba5f0/ 2020-12-07T13:07:22.917894+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF680HQB/ ENCFF680HQB ENCFF680HQB /experiments/ENCSR200CUA/ GRCh38 2_1 2 bam bam 5534976774 ChIP-seq MCF-7 mammary gland,epithelium,exocrine gland /biosamples/ENCBS308QKF/ HDGF /files/ENCFF680HQB/@@download/ENCFF680HQB.bam /files/ENCFF110MCL/,/files/ENCFF094RKI/,/files/ENCFF217CEA/ 100 100 2 paired-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/811e59c0-ce95-4cb5-abc3-b5cd5e661625/,/chip-library-quality-metrics/929ab095-32c8-472f-a885-35a49a5f9f97/,/chip-alignment-quality-metrics/32c45f59-180e-4208-a477-2c2a8bd0d62a/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/0d70ff91-5814-422b-a458-e922c2618669/ 2020-12-08T17:29:42.054072+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF973WSU/ ENCFF973WSU ENCFF973WSU /experiments/ENCSR508DQA/ GRCh38 1_1 1 bam bam 3302423471 ChIP-seq K562 blood,bodily fluid /biosamples/ENCBS697XFI/ FOXK2 /files/ENCFF973WSU/@@download/ENCFF973WSU.bam /files/ENCFF260CTF/,/files/ENCFF110MCL/,/files/ENCFF959CFI/ 100 100 2 paired-ended nt alignment alignments /chip-library-quality-metrics/c5a25df4-b269-432e-843d-aafb16b8d4e7/,/chip-alignment-quality-metrics/f7afffa9-8670-4d5b-b871-a0fb1c5b1f69/,/chip-alignment-enrichment-quality-metrics/7010ed6a-c335-4e1b-a310-ab5afe5597d0/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/c006740e-b4c6-4ae6-b0f2-c1197e7a6983/ 2020-12-07T22:38:24.747211+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF512IYV/ ENCFF512IYV ENCFF512IYV /experiments/ENCSR000EGR/ GRCh38 2_1 2 bam bam 158380354 ChIP-seq K562 blood,bodily fluid /biosamples/ENCBS039ENC/ NFYA /files/ENCFF512IYV/@@download/ENCFF512IYV.bam /files/ENCFF110MCL/,/files/ENCFF000YVR/ 27 27 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/ab857d56-39f4-451f-9899-440d94534c6d/,/chip-alignment-enrichment-quality-metrics/95674aad-629a-4fbf-968d-b1e76452e3bc/,/chip-library-quality-metrics/71343be1-666f-4061-a5ba-5c6bc1e04512/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/2de7072d-4e6a-44f3-b570-42f409cb32c3/ 2020-12-10T22:06:08.601306+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF185AJU/ ENCFF185AJU ENCFF185AJU /experiments/ENCSR431XGJ/ GRCh38 3_1 3 bam bam 2932457209 ChIP-seq K562 blood,bodily fluid /biosamples/ENCBS207UAM/ PYGO2 /files/ENCFF185AJU/@@download/ENCFF185AJU.bam /files/ENCFF113QZV/,/files/ENCFF110MCL/,/files/ENCFF891LJI/ 100 100 2 paired-ended nt alignment alignments /chip-library-quality-metrics/eefb2495-2b03-4d33-a967-5a77f4054c7d/,/chip-alignment-quality-metrics/338d9a43-07f8-4f2e-9b16-3a64697d1589/,/chip-alignment-enrichment-quality-metrics/ea2a2233-8cc3-4686-9150-11586163946c/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/2f03873c-47ac-404e-807e-3a7b65acfe5c/ 2020-12-08T03:12:10.528540+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF834GEN/ ENCFF834GEN ENCFF834GEN /experiments/ENCSR091JXL/ GRCh38 2_1 2 bam bam 3294874411 ChIP-seq K562 blood,bodily fluid /biosamples/ENCBS048GNZ/ HES1 /files/ENCFF834GEN/@@download/ENCFF834GEN.bam /files/ENCFF110MCL/,/files/ENCFF600EDO/,/files/ENCFF583IRH/ 100 100 2 paired-ended nt alignment alignments /chip-alignment-enrichment-quality-metrics/58b29b46-c315-4dcf-bc58-eada8b035e3c/,/chip-alignment-quality-metrics/8cdd113d-8b14-4bf1-807e-0605798bec2c/,/chip-library-quality-metrics/7db63fef-5d60-48db-b801-e2baa9e85517/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/69e39989-2154-4414-86a2-9763f15db95b/ 2020-12-09T05:21:40.885445+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released +/files/ENCFF163VCX/ ENCFF163VCX ENCFF163VCX /experiments/ENCSR000BKT/ GRCh38 2_1 2 bam bam 172457787 ChIP-seq K562 blood,bodily fluid /biosamples/ENCBS109ENC/ USF1 /files/ENCFF163VCX/@@download/ENCFF163VCX.bam /files/ENCFF000QJP/,/files/ENCFF110MCL/ 36 36 2 single-ended nt alignment alignments /chip-alignment-quality-metrics/cbab7fe5-3cf8-429a-8d4e-ef695afd3528/,/chip-alignment-enrichment-quality-metrics/0b5c4460-1cee-45a3-b7ce-333e09d12f84/,/chip-library-quality-metrics/d38d4822-2f84-4bae-9141-39ce79e04a4a/ ENCODE Processing Pipeline ENCODE /analysis-step-runs/09c2633b-54f9-4887-b500-f4008456d5d5/ 2020-12-10T20:45:36.921684+00:00 /analysis-step-versions/chip-seq-alignment-step-v-2-0/ released diff --git a/paper/ENCODEdata-CellLines/README.md b/paper/ENCODEdata-CellLines/README.md index 9136502..8ada517 100644 --- a/paper/ENCODEdata-CellLines/README.md +++ b/paper/ENCODEdata-CellLines/README.md @@ -2,14 +2,68 @@ Run StrainID on ENCODE data and evaluate StrainID's performance. +| | | +| :--: | -- | +| Figure 6C | `ENCODEdata-CellLines/results/ID/` | +| Supplementary Figure 2 | `ENCODEdata-CellLines/results/hg38_ID/` | +| Supplementary Table 10 | `ENCODEdata-CellLines/results/SupplementaryTable10.txt.gz` | +| Supplementary Table 11 | `ENCODEdata-CellLines/results/SupplementaryTable11.txt.gz` | + # Reference files + +## 210512_sample_metadata.txt ENCODE metadata was pulled on May 12, 2021 using the `scripts/get_metadata.py` script that pulls all Biosample accessions with classification="cell_line" and whose string matches one of the cell lines we have in our hg19_VCF database. These are used to pull File accessions with type=BAM and assembly=hg19. We did not filter by assay for this analysis. They are saved with all relevant metadata to the `210512_sample_metadata.txt` file. Command used: `python scripts/get_metadata.py > 210512_sample_metadata.txt` +## 230612_hg38_100-TF-ChIP-seq.txt +ENCODE metadata was pulled on June 12, 2023 according to the retrieval URL in the header. The filter criteria ensured files were BAM formats using the hg38 genome build, from the TF ChIP-seq assay, and from a cell line background in the core `hg19_VCF` set. Only the top 100 BAM files were saved here. + # Download ENCODE CellLine data and run through StrainID -Use the 210512_sample_metadata.txt file with ENCODE accessions to download the -data to the data directory. Then run the data through StrainID. +Use the 210512_sample_metadata.txt file with ENCODE accessions to download and process the +data to the `results` directory. Then run the data through StrainID. + +## Download BAM files +``` +qsub job/00_download_data.pbs +``` + +## Filter BAM files + +``` +qsub job/01_filter_and_count.pbs +``` + +## Run StrainID +``` +qsub job/02_indexed_runSID.pbs +``` + +## Compile the results with the metadata information +Evaluate the accuracy of StrainID on real data by merging the metadata with the StrainID results. +``` +python scripts/analyze_encode_results.py -i results/ID -m 210512_sample_metadata.txt -o results/SupplementaryTable10.txt +python scripts/build_violinscatter.py -i results/SupplementaryTable10.txt -o results/Figure6C.png +``` + +You can even filter the visualization to show the results for specific assays by using the `-a` option flag +``` +python scripts/build_violinscatter.py -i results/SupplementaryTable10.txt -o results/Figure6C_ChIP-seq.png -a "ChIP-seq" +python scripts/build_violinscatter.py -i results/SupplementaryTable10.txt -o results/Figure6C_CAGE.png -a "CAGE" +python scripts/build_violinscatter.py -i results/SupplementaryTable10.txt -o results/Figure6C_small-RNA-seq.png -a "small RNA-seq" +``` + +# Characterize StrainID scores from 100 ChIP-seq datasets +To better understand the distribution of scores output by StrainID for "correct" and "incorrect" strain backgrounds, we ran StrainID on our largest reference set of over 1,000 cell lines (`hg38_DepMap`) in a sample of TF-ChIP-seq datasets from ENZCODE. + +## Download data & Run StrainID +``` +qsub job/02_indexed_runSID.pbs +``` -# Compare the results to the metadata information -Evaluate the accuracy of StrainID on real data. +## Compile the results with the metadata information +Compile the results into a table and plot the scores as two overlapping histograms. +``` +python scripts/merge_sidscores.py -i results/hg38_ID/ -m 230612_hg38_100-TF-ChIP-seq.txt -o results/SupplementaryTable11.txt +python scripts/build_sidscore_histogram.py -i results/hg38_ID/ -o results/SupplementaryFigure2.png +``` diff --git a/paper/ENCODEdata-CellLines/job/04_Hundred_hg38.pbs b/paper/ENCODEdata-CellLines/job/04_Hundred_hg38.pbs new file mode 100644 index 0000000..aebaceb --- /dev/null +++ b/paper/ENCODEdata-CellLines/job/04_Hundred_hg38.pbs @@ -0,0 +1,95 @@ +#!/bin/bash +#PBS -l nodes=1:ppn=6 +#PBS -l pmem=24gb +#PBS -l walltime=05:00:00 +#PBS -A open +#PBS -o logs/download.data.log.out +#PBS -e logs/download.data.log.err +#PBS -t 1-100 + +module load samtools +#module load anaconda +#source activate my-genopipe-env + +WRK=/path/to/GenoPipe/paper/ENCODE-CellLines + +# Execute from /path/to/GenoPipe/paper/ENCODE-CellLines + +[ -d logs ] || mkdir logs +[ -d results/hg38_BAM ] || mkdir -p results/hg38_BAM +[ -d results/hg38_BAM-nospike ] || mkdir -p results/hg38_BAM-nospike +[ -d results/hg38_ID ] || mkdir -p results/hg38_ID + +METADATA=230612_hg38_100-TF-ChIP-seq.txt +INFO=`sed "2d" $METADATA | sed "${PBS_ARRAYID}q;d"` +ENCFF=`echo $INFO | awk '{FS="/t"}{print $2}'` +#echo $INFO + +# Store directory paths +DATABASE=$WRK/../db/hg38_DepMap +GENOME=$WRK/../input/hg38.fa +SEED=$PBS_ARRAYID +GENOPIPE=$WRK/../.. +BAM=$WRK/results/hg38_BAM/$ENCFF +NOSPIKE=$WRK/results/hg38_BAM-nospike/$ENCFF +ID=$WRK/results/hg38_ID + +# ENCODE data download +HREF=/files/$ENCFF/@@download/$ENCFF.bam +echo "Fetching from https://www.encodeproject.org$HREF" +wget -c https://www.encodeproject.org$HREF -O $BAM.bam + +# Checksum of resulting BAM +MD5SUM=`echo $INFO | awk '{FS="/t"}{print $3}'` +#if [[ `md5sum $BAM` =~ $MD5SUM ]]; then +# echo "($PBS_ARRAYID) $BAM passed." +#else +# echo "($PBS_ARRAYID) $BAM md5checksum failed!" +# rm $BAM +# exit +#fi + +# Index BAM file +[ -f $BAM.bam.bai ] || samtools index $BAM.bam + +# Strip Spike-in +python scripts/filter_spikein.py -b $BAM.bam -g ../input/hg38.fa -o $NOSPIKE.bam +samtools index $NOSPIKE.bam + +# Count Bases +[ -f $BAM.bam.bai ] && python scripts/estimate_bp_sequenced.py -b $BAM.bam > $BAM\_bpcount.txt +[ -f $NOSPIKE.bam.bai ] && python scripts/estimate_bp_sequenced.py -b $NOSPIKE.bam > $NOSPIKE\_bpcount.txt + + +#Check that BAM file was generated first +if [ ! -f $NOSPIKE.bam ]; +then + echo "BAM input for $NOSPIKE/$ENCFF does not exist. Exiting." + exit +fi + +#Check that BAM Index file exists +if [ ! -f $NOSPIKE.bam.bai ]; +then + echo "BAI missing for for $ENCFF. Exiting." + exit +fi + +# Set-up Temp directory +TEMP=$WRK/temp-$PBS_ARRAYID +[ -d $TEMP ] || mkdir $TEMP +cd $TEMP +echo $TEMP +ln -s $NOSPIKE.bam +ln -s $NOSPIKE.bam.bai + +echo $TEMP +## Execute Single StrainID and record time +cd $GENOPIPE/StrainID +echo "**Begin executing StrainID for ${ENCFF}..." +{ time bash identify-Strain.sh -i $TEMP -g $GENOME -v $DATABASE -s $SEED -o $ID > $ID/$ENCFF.std ; } 2> $ID/$ENCFF.time +echo "...single StrainID for ($PBS_ARRAYID) ${ENCFF} finished." +cd $WRK + +## Clean-up +rm -r $TEMP diff --git a/paper/ENCODEdata-CellLines/results/Figure6C.png b/paper/ENCODEdata-CellLines/results/Figure6C.png new file mode 100644 index 0000000..ff851e8 Binary files /dev/null and b/paper/ENCODEdata-CellLines/results/Figure6C.png differ diff --git a/paper/ENCODEdata-CellLines/results/Figure6C_CAGE.png b/paper/ENCODEdata-CellLines/results/Figure6C_CAGE.png new file mode 100644 index 0000000..fe34c84 Binary files /dev/null and b/paper/ENCODEdata-CellLines/results/Figure6C_CAGE.png differ diff --git a/paper/ENCODEdata-CellLines/results/Figure6C_ChIP-seq.png b/paper/ENCODEdata-CellLines/results/Figure6C_ChIP-seq.png new file mode 100644 index 0000000..aa4ea6b Binary files /dev/null and b/paper/ENCODEdata-CellLines/results/Figure6C_ChIP-seq.png differ diff --git a/paper/ENCODEdata-CellLines/results/Figure6C_small-RNA-seq.png b/paper/ENCODEdata-CellLines/results/Figure6C_small-RNA-seq.png new file mode 100644 index 0000000..a699fb6 Binary files /dev/null and b/paper/ENCODEdata-CellLines/results/Figure6C_small-RNA-seq.png differ diff --git a/paper/ENCODEdata-CellLines/results/SupplementaryFigure2.png b/paper/ENCODEdata-CellLines/results/SupplementaryFigure2.png new file mode 100644 index 0000000..2a3d8c7 Binary files /dev/null and b/paper/ENCODEdata-CellLines/results/SupplementaryFigure2.png differ diff --git a/paper/ENCODEdata-CellLines/results/SupplementaryTable10.txt.gz b/paper/ENCODEdata-CellLines/results/SupplementaryTable10.txt.gz new file mode 100644 index 0000000..586d802 Binary files /dev/null and b/paper/ENCODEdata-CellLines/results/SupplementaryTable10.txt.gz differ diff --git a/paper/ENCODEdata-CellLines/results/SupplementaryTable11.txt.gz b/paper/ENCODEdata-CellLines/results/SupplementaryTable11.txt.gz new file mode 100644 index 0000000..5d86339 Binary files /dev/null and b/paper/ENCODEdata-CellLines/results/SupplementaryTable11.txt.gz differ diff --git a/paper/ENCODEdata-CellLines/scripts/analyze_encode_results.py b/paper/ENCODEdata-CellLines/scripts/analyze_encode_results.py index 621713f..c2b4287 100644 --- a/paper/ENCODEdata-CellLines/scripts/analyze_encode_results.py +++ b/paper/ENCODEdata-CellLines/scripts/analyze_encode_results.py @@ -2,15 +2,26 @@ from os.path import isfile, join import sys import argparse +import numpy as np +import pandas as pd # Python 3 needed for encoding feature for UTF-8 # (ENCODE uses some capital delta chars in summary descriptions of GeneticModifications) +CL = ["LnCap", "MCF7", "SKnSH", "HepG2", "K562", "A549", "HCT116", "HELA"] +ENCODEtoStrainID = { + "HeLa-S3":"HELA", + "LNCAP":"LnCap", + "MCF-7":"MCF7", + "SK-N-SH":"SKnSH" +} + def getParams(): '''Parse parameters from the command line''' - parser = argparse.ArgumentParser(description='Parse metadata file and GenoPipe output to check detection rates of the GenoPipe tool.') + parser = argparse.ArgumentParser(description='Parse metadata file and StrainID output to check per sample detection by StrainID scores.') parser.add_argument('-m','--metadata', metavar='metadata_fn', required=True, help='the metadata file downloaded with ENCODE dataset that includes info like PE/SE, cell line, assay type, and read lengths/SE-PE') parser.add_argument('-i','--input-dir', metavar='input_dir', required=True, help='the directory where all the EpitopeID output files were saved (*strain.tab)') + parser.add_argument('-o','--output', metavar='output_fn', required=True, help='the output filepath for final TSV with parsed StrainID scores') args = parser.parse_args() return(args) @@ -25,7 +36,7 @@ def getParams(): #HCT116.vcf -4.847450343904915 #HELA.vcf -4.906670711358038 def parse_file(var_file): - dict = {} + scores = [] reader = open(var_file,'r') for line in reader: tokens = line.split("\t") @@ -33,14 +44,13 @@ def parse_file(var_file): continue score = float(tokens[1].strip()) if(tokens[1].strip().lower()=="inf"): - score = 500000 + score = np.Inf elif(tokens[1].strip().lower()=="nan"): - score = -500000 - + score = np.NaN # update dict - dict[tokens[0].split(".")[0]] = score + scores.append((score, tokens[0].split(".")[0])) reader.close() - return(dict) + return(scores) #ENCFF364CPX /files/ENCFF364CPX/@@download/ENCFF364CPX.bam 79651f67b1c4d564395c18be9cdff62f HeLa-S3 ChIP-seq single-ended 36 /files/ENCFF807MUK/|/files/ENCFF000BAO/ unfiltered alignments /experiments/ENCSR000AOB/ /biosample-types/cell_line_EFO_0002791/ 1884977463 released 2020-02-18T20:47:36.519163+00:00 #ENCFF325UJS /files/ENCFF325UJS/@@download/ENCFF325UJS.bam 042b20b3e149df6c1f4e5c95f83653ee HepG2 ChIP-seq single-ended 36 /files/ENCFF807MUK/|/files/ENCFF000BGR/ alignments /experiments/ENCSR000AOM/ /biosample-types/cell_line_EFO_0001187/ 978259147 released 2020-02-18T09:15:21.891603+00:00 @@ -50,27 +60,38 @@ def parse_file(var_file): args = getParams() # Parse metadata - reader = open(args.metadata, 'r', encoding='utf-8') - for mline in reader: - # Pull relevant info from metadata tokens - mtokens = mline.strip().split('\t') - encff = mtokens[0] + data = pd.read_csv(args.metadata, sep='\t', names=['File_Accession','Download_URL','MD5sum', 'ENCODE_strain', 'Assay', 'library_type', 'read_length', 'derived_from', 'bam_type', 'Experiment_Accession', 'Biosample_Accession', 'File_Size', 'Audit_status', 'date']) + + # Initialize summary StrainID results columnss + data['StrainID_strain'] = None + data['StrainID_success'] = None + data['Comment'] = None + # Initialize each strain's score to Nones + for c in CL: + data[c + "_score"] = None + + # Loop through each sample + for index, row in data.iterrows(): + # Map ENCODE-formatted strain to StrainID-formatted + data['ENCODE_strain'][index] = ENCODEtoStrainID.get(data['ENCODE_strain'][index], data['ENCODE_strain'][index]) # Check file exists - id_file = join(args.input_dir,"%s_strain.tab" % encff) + id_file = join(args.input_dir,"%s_strain.tab" % data['File_Accession'][index]) + # print(data['File_Accession'][index]) if(not isfile(id_file)): - sys.stderr.write("%s: no results generated.\n" % (id_file)) + data['StrainID_success'][index] = "Missing Results" + data['Comment'][index] = "Missing Results" continue - - # Initialize id file variables to save - called_strain = "" # Parse id file for cell line score info and sort strains by score strain_info = parse_file(id_file) - strain_sortbyscore = sorted( strain_info.keys(), key=lambda x: (strain_info[x]), reverse=True) + for s in strain_info: + data[s[1] + "_score"][index] = str(s[0]) + # Sort scores to get the best one + strain_sortbyscore = sorted([s for s in strain_info if not np.isnan(s[0]) ], reverse=True) # Assign strain with best score to called_strain - if(len(strain_info.keys())>1): - called_strain = strain_sortbyscore[0] + if(len(strain_sortbyscore)>0): + data['StrainID_strain'][index] = strain_sortbyscore[0][1] + data['StrainID_success'][index] = data['StrainID_strain'][index] == data['ENCODE_strain'][index] - # Write called strain with metadata - sys.stdout.write( "%s\t%s\t%s\t%s\n" % (encff, called_strain, strain_info.get(called_strain,"NaN"), "\t".join(mtokens[3:])) ) - reader.close() + # Write final data frame + data.to_csv(args.output, sep="\t") diff --git a/paper/ENCODEdata-CellLines/scripts/build_sidscore_histogram.py b/paper/ENCODEdata-CellLines/scripts/build_sidscore_histogram.py new file mode 100644 index 0000000..1e9ca58 --- /dev/null +++ b/paper/ENCODEdata-CellLines/scripts/build_sidscore_histogram.py @@ -0,0 +1,150 @@ +#!/bin/python +from os import listdir +from os.path import isfile, join +import sys +import re +import random +import argparse +import matplotlib.pyplot as plt +import numpy as np +import seaborn as sns +import pandas as pd + +# Python 3 needed for encoding feature for UTF-8 +# (ENCODE uses some capital delta chars in summary descriptions of GeneticModifications) + +# Check Seaborn documentation: https://seaborn.pydata.org/generated/seaborn.swarmplot.html + +ENCODEtoStrainID = { + "HeLa-S3":"HELA", + "LNCAP":"LNCAPCLONEFGC", + "MCF-7":"MCF7", + "SK-N-SH":"SKNSH" +} + +# K562 2640 +# A549 1189 +# MCF-7 556 +# SK-N-SH 210 +# HeLa-S3 196 +# HCT116 96 + + +def getParams(): + '''Parse parameters from the command line''' + parser = argparse.ArgumentParser(description='Build histogram characterization plot from hg38 ENCODE StrainID results.') + parser.add_argument('-m','--metadata', metavar='metadata_fn', required=True, help='the metadata file downloaded with ENCODE dataset') + parser.add_argument('-i','--input-dir', metavar='input_dir', required=True, help='the directory where all the StrainID output files were saved (*strain.tab)') + + parser.add_argument('-o','--output', metavar='png_fn', required=True, help='the output figure image') + + parser.add_argument('-a','--assay', metavar='assay_name', default=None, help='the ENCODE assay name to filter datasets by (default:No Filter)') + + args = parser.parse_args() + return(args) + +# ENCFF000DZC.bam +#LnCap.vcf -5.082117812158647 +#MCF7.vcf -6.1143012059424935 +#SKnSH.vcf -5.7641601741217645 +#HepG2.vcf -5.595833186705702 +#K562.vcf 1.8812984639660986 +#A549.vcf -6.059318584695944 +#HCT116.vcf -4.847450343904915 +#HELA.vcf -4.906670711358038 +def parse_file(var_file, expected): + # Parse file + scores = pd.read_table(var_file, sep='\t', header=0, names=['Strain','Scores']) + # Add filename info + scores['Filename'] = var_file + # Add match information + scores['Match'] = scores['Strain']==expected + # Return scores + return(scores) + +if __name__ == "__main__": + '''Plot swarm''' + args = getParams() + + # Hardcode some presets + SIZE=5 + strains2filter = ['P2URK562.vcf'] + strains2filter.extend(['HCT15.vcf', 'HCT8.vcf']) + strains2filter.extend(['HEL9217.vcf', 'HEL.vcf']) + strains2filter.extend(['HEP3B217.vcf']) + strains2filter.extend(['MCF10A.vcf', 'MCF12A.vcf']) + strains2filter.extend(['LN18.vcf', 'LN215.vcf', 'LN229.vcf', 'LN235.vcf', 'LN319.vcf', 'LN340.vcf', 'LN382.vcf', 'LN405.vcf', 'LN428.vcf', 'LN443.vcf', 'LN464.vcf', 'LNZTA3WT4.vcf', 'LNZ308.vcf']) + + strains2filter.extend(['SKN3.vcf', 'SKNAS.vcf', 'SKNBE2.vcf', 'SKNDZ.vcf', 'SKNEP1.vcf', 'SKNFI.vcf', 'SKNMC.vcf', 'SKNMM.vcf', 'SKNO1.vcf','SKN.vcf']) + strains2filter.extend(['SKBR3.vcf', 'SKBR5.vcf', 'SKBR7.vcf', 'SKCO1.vcf', 'SKES1.vcf', 'SKGIIIA.vcf', 'SKGII.vcf', 'SKGI.vcf', 'SKGT2.vcf', 'SKGT4.vcf', + 'SKHEP1.vcf', 'SKLMS1.vcf', 'SKLU1.vcf', 'SKM1.vcf', 'SKMEL19.vcf', 'SKMEL1.vcf', 'SKMEL24.vcf', 'SKMEL28.vcf', 'SKMEL2.vcf', 'SKMEL30.vcf', + 'SKMEL31.vcf', 'SKMEL3.vcf', 'SKMEL5.vcf', 'SKMES1.vcf', 'SKMG1.vcf', 'SKMM2.vcf', 'SKOV3.vcf', 'SKPNDW.vcf', 'SKRC20.vcf', 'SKRC31.vcf', 'SKUT1.vcf']) + + + # Parse metadata + filedata = pd.read_csv(args.metadata, sep='\t', header=1) + filedata['BIOSAMPLE_NAME'] = None + df_list_scores = [] + + # Loop through each sample + for index, row in filedata.iterrows(): + # Map ENCODE-formatted strain to StrainID-formatted + filedata['BIOSAMPLE_NAME'][index] = ENCODEtoStrainID.get(filedata['Biosample name'][index], filedata['Biosample name'][index]) + expected_vcfname = filedata['BIOSAMPLE_NAME'][index] + ".vcf" + + # Check file exists + id_file = join(args.input_dir,"%s_strain.tab" % filedata['Accession'][index]) + if(not isfile(id_file)): + continue + + # Parse ID file and add scores to final dataframe + scores = parse_file(id_file, expected_vcfname) + df_list_scores.append(scores) + + # for FCL in strains2filter: + # print(scores[scores['Strain']==FCL]) + + + # Concatenate the strains together + all_scores = pd.concat(df_list_scores) + + # Apply a hardcoded filter for parental strains + + # all_scores = all_scores.loc[all_scores['Strain'] in strains2filter] + for FCL in strains2filter: + print(FCL) + # print(all_scores[all_scores['Strain']==FCL]) + all_scores = all_scores[all_scores['Strain']!=FCL] + + + # Get counts for samples with all NaNs and format for table + data_nans = pd.DataFrame(all_scores[pd.isnull(all_scores['Scores'])]) + data_value = pd.DataFrame(all_scores[~pd.isnull(all_scores['Scores'])]) + + # print(data_nans['Strain'].value_counts()) + + # Plot violin, swarms, and table + fig, ax = plt.subplots() + sns.histplot(ax=ax, x="Scores", binwidth=.1, data=data_value[~data_value['Match']], color='cyan') + ax2 = ax.twinx() + sns.histplot(ax=ax2, x="Scores", binwidth=.1, data=data_value[data_value['Match']], color='orange') + plt.tight_layout() + # palette = { + # "A549":"tab:blue", + # "HCT116":"tab:orange", + # "HELA":"tab:green", + # "HepG2":"tab:red", + # "K562":"tab:purple", + # "LnCap":"tab:olive", + # "MCF7":"tab:cyan", + # "SKnSH":"tab:pink" + # } + + # Format figure + ax.set_xlabel("StrainID -log2 score") + ax.set_ylabel("number of scores for every sample x other cell lines (blue)") + ax2.set_ylabel("number of scores for sample x matching cell line (orange)") + # Save figure + fig.set_size_inches(12,8) + #plt.show() + plt.savefig(args.output, dpi=500) diff --git a/paper/ENCODEdata-CellLines/scripts/build_violinscatter.py b/paper/ENCODEdata-CellLines/scripts/build_violinscatter.py new file mode 100644 index 0000000..795db77 --- /dev/null +++ b/paper/ENCODEdata-CellLines/scripts/build_violinscatter.py @@ -0,0 +1,77 @@ +#!/bin/python +from os import listdir +from os.path import isfile, join +import sys +import re +import random +import argparse +import matplotlib.pyplot as plt +import numpy as np +import seaborn as sns +import pandas as pd + +# Python 3.6+ +# relies on dict insertion order + +# Check Seaborn documentation: https://seaborn.pydata.org/generated/seaborn.swarmplot.html + +def getParams(): + '''Parse parameters from the command line''' + parser = argparse.ArgumentParser(description='Build violinplots from ENCODE StrainID results.') + + parser.add_argument('-i','--input', metavar='input_fn', required=True, help='the output tab file from analyzed_eid_results.py') + parser.add_argument('-o','--output', metavar='png_fn', required=True, help='the output figure image') + + parser.add_argument('-a','--assay', metavar='assay_name', default=None, help='the ENCODE assay name to filter datasets by (default:No Filter)') + + args = parser.parse_args() + return(args) + +if __name__ == "__main__": + '''Plot swarm''' + args = getParams() + + # Hardcode some presets + SIZE=5 + palette = { + "A549":"tab:blue", + "HCT116":"tab:orange", + "HELA":"tab:green", + "HepG2":"tab:red", + "K562":"tab:purple", + "LnCap":"tab:olive", + "MCF7":"tab:cyan", + "SKnSH":"tab:pink" + } + + # Parse data table results and get max StrainID scores + filedata = pd.read_table(args.input, sep='\t') + justscores = filedata.loc[:, 'LnCap_score':'HELA_score'] + filedata['StrainID_bestscore'] = justscores.max(axis=1) + filedata = filedata.sort_values(by='ENCODE_strain') + + # Filter by assay name if specified + if (args.assay!=None): + filedata = filedata[filedata['Assay']==args.assay] + + # Separate success/fail sets for violin vs swarms + data_success = filedata[filedata['StrainID_success']=='True'] + data_fails = filedata[filedata['StrainID_success']=='False'] + + # Get counts for samples with all NaNs and format for table + data_nans = pd.DataFrame(filedata[filedata['StrainID_success'].isnull()]['ENCODE_strain'].value_counts(), index=["A549", "HCT116", "HELA", "HepG2", "K562", "LnCap", "MCF7", "SKnSH"]).T.fillna(value=0) + + # Plot violin, swarms, and table + fig, ax = plt.subplots() + sns.violinplot(ax=ax, x="ENCODE_strain", y="StrainID_bestscore", hue="StrainID_strain", data=data_success, palette=palette) + sns.stripplot(ax=ax, x="ENCODE_strain", y="StrainID_bestscore", hue="StrainID_strain", data=data_fails, palette=palette) + plt.table(cellText=data_nans.values, rowLabels=data_nans.index, colLabels=data_nans.columns) + + # Format figure + ax.set_ylabel("StrainID -log2 score") + ax.set_ylim(-8,10) + + # Save figure + fig.set_size_inches(12,8) + #plt.show() + plt.savefig(args.output, dpi=500) diff --git a/paper/ENCODEdata-CellLines/scripts/merge_sidscores.py b/paper/ENCODEdata-CellLines/scripts/merge_sidscores.py new file mode 100644 index 0000000..8c459f2 --- /dev/null +++ b/paper/ENCODEdata-CellLines/scripts/merge_sidscores.py @@ -0,0 +1,40 @@ +import sys, os +import pandas as pd +import argparse + +def getParams(): + '''Parse parameters from the command line''' + parser = argparse.ArgumentParser(description='Merge all tab files from StrainID results into a single table.') + parser.add_argument('-m','--metadata', metavar='metadata_fn', required=True, help='the metadata file downloaded with ENCODE dataset') + parser.add_argument('-i','--input-dir', metavar='input_dir', required=True, help='the directory where all the StrainID output files were saved (*strain.tab)') + parser.add_argument('-o','--output', metavar='txt_fn', required=True, help='the output tab-delimited table path') + + args = parser.parse_args() + return(args) + +if __name__ == "__main__": + '''Merge results''' + + args = getParams() + + merged_df = None + # Loop through each StrainID results file + reader = open(args.metadata, 'r') + for line in reader: + if(line.find('/files/')!=0): + continue + tokens = line.split('\t') + # Load results and name VCF filename column "CellLine" + temp_df = pd.read_csv(args.input_dir + "/" + tokens[1] + "_strain.tab", sep='\t', header=0) + temp_df.columns.values[0] = 'CellLine' + temp_df.loc[len(temp_df.index)] = ['0Correct_Strain', tokens[12]] + # Merge into merged_df + if (merged_df is None): + merged_df = temp_df + continue + merged_df = pd.merge(merged_df, temp_df, on='CellLine') + reader.close() + # sort values before saving + merged_df = merged_df.sort_values(by=['CellLine']) + # write merged_df to output file + merged_df.to_csv(args.output, sep='\t') diff --git a/paper/SyntheticStrain/depth_simulations.txt b/paper/SyntheticStrain/depth_simulations.txt index 558a304..a2b7931 100644 --- a/paper/SyntheticStrain/depth_simulations.txt +++ b/paper/SyntheticStrain/depth_simulations.txt @@ -20,4 +20,5 @@ hg19_HELA 2M 18000 hg19_HELA 5M 19000 hg19_HELA 10M 20000 hg19_HELA 20M 21000 - +hg38_K562 20M 16000 +hg38_HELA 20M 21000 diff --git a/paper/SyntheticStrain/job/generate_synthetic_genomes.sh b/paper/SyntheticStrain/job/generate_synthetic_genomes.sh index 7828e4d..2ff64ea 100644 --- a/paper/SyntheticStrain/job/generate_synthetic_genomes.sh +++ b/paper/SyntheticStrain/job/generate_synthetic_genomes.sh @@ -5,6 +5,7 @@ ADDSNPS=scripts/add_VCF_into_Genomic_FASTA.py SVCF=../db/sacCer3_VCF/full_VCF HVCF=../db/hg19_VCF +H38VCF=../db/VCF_hg38 [ -d synthetic_genome ] || mkdir synthetic_genome python $ADDSNPS -f ../input/sacCer3.fa -v $SVCF/RM11-1A.gatk.vcf > synthetic_genome/sacCer3_RM11-1A.fa @@ -13,6 +14,9 @@ python $ADDSNPS -f ../input/sacCer3.fa -v $SVCF/CEN.PK2-1Ca.gatk.vcf > synthetic python $ADDSNPS -f ../input/hg19.fa -v $HVCF/K562.vcf > synthetic_genome/hg19_K562.fa python $ADDSNPS -f ../input/hg19.fa -v $HVCF/HELA.vcf > synthetic_genome/hg19_HELA.fa +python $ADDSNPS -f ../input/hg38.fa -v $H38VCF/K562.vcf > synthetic_genome/hg38_K562.fa +python $ADDSNPS -f ../input/hg38.fa -v $H38VCF/HELA.vcf > synthetic_genome/hg38_HELA.fa + for FASTA in `ls synthetic_genome/*.fa`; do samtools faidx $FASTA diff --git a/paper/SyntheticStrain/job/run_depth_hg38_HELA_20M.pbs b/paper/SyntheticStrain/job/run_depth_hg38_HELA_20M.pbs new file mode 100644 index 0000000..dd3ed6a --- /dev/null +++ b/paper/SyntheticStrain/job/run_depth_hg38_HELA_20M.pbs @@ -0,0 +1,35 @@ +#!/bin/bash +#PBS -l nodes=1:ppn=4 +#PBS -l pmem=16gb +#PBS -l walltime=03:00:00 +#PBS -A open +#PBS -o logs/depth.hg38.HELA.20M.log.out +#PBS -e logs/depth.hg38.HELA.20M.log.err +#PBS -t 1-1000 + +# FIRST CHANGE PATH TO EXECUTE +WRK=/path/to/GenoPipe/paper/SyntheticStrain +cd $WRK + +module load bedtools +module load bwa +module load samtools +module load anaconda3 +source activate my-genopipe-env + +INFO=`sed "24q;d" depth_simulations.txt` +STRAIN=`awk '{print $1}' <(echo $INFO)` +DEPTH=`awk '{print $2}' <(echo $INFO)` +BASE=`awk '{print $3}' <(echo $INFO)` +REF=`awk -F"_" '{print $1}' <(echo $STRAIN)` + +GENOME=synthetic_genome/$STRAIN.fa +OUTPUT=results/$STRAIN\_$DEPTH +SEED=$(($BASE+$PBS_ARRAYID)) + +start=`date +%s` +bash ../scripts/simulate.sh -i $PBS_ARRAYID -d $DEPTH -s $SEED -g $GENOME -o $OUTPUT +bash ../scripts/align.sh -i $PBS_ARRAYID -g ../input/$REF.fa -o $OUTPUT -t 4 +end=`date +%s` +runtime=$((end-start)) +echo "${STRAIN} ${DEPTH} simulate in ${runtime}" diff --git a/paper/SyntheticStrain/job/run_depth_hg38_K562_20M.pbs b/paper/SyntheticStrain/job/run_depth_hg38_K562_20M.pbs new file mode 100644 index 0000000..e04030c --- /dev/null +++ b/paper/SyntheticStrain/job/run_depth_hg38_K562_20M.pbs @@ -0,0 +1,35 @@ +#!/bin/bash +#PBS -l nodes=1:ppn=4 +#PBS -l pmem=16gb +#PBS -l walltime=03:00:00 +#PBS -A open +#PBS -o logs/depth.hg38.K562.20M.log.out +#PBS -e logs/depth.hg38.K562.20M.log.err +#PBS -t 1-1000 + +# FIRST CHANGE PATH TO EXECUTE +WRK=/path/to/GenoPipe/paper/SyntheticStrain +cd $WRK + +module load bedtools +module load bwa +module load samtools +module load anaconda3 +source activate my-genopipe-env + +INFO=`sed "23q;d" depth_simulations.txt` +STRAIN=`awk '{print $1}' <(echo $INFO)` +DEPTH=`awk '{print $2}' <(echo $INFO)` +BASE=`awk '{print $3}' <(echo $INFO)` +REF=`awk -F"_" '{print $1}' <(echo $STRAIN)` + +GENOME=synthetic_genome/$STRAIN.fa +OUTPUT=results/$STRAIN\_$DEPTH +SEED=$(($BASE+$PBS_ARRAYID)) + +start=`date +%s` +bash ../scripts/simulate.sh -i $PBS_ARRAYID -d $DEPTH -s $SEED -g $GENOME -o $OUTPUT +bash ../scripts/align.sh -i $PBS_ARRAYID -g ../input/$REF.fa -o $OUTPUT -t 4 +end=`date +%s` +runtime=$((end-start)) +echo "${STRAIN} ${DEPTH} simulate in ${runtime}" diff --git a/paper/setup.sh b/paper/setup.sh index 3f75e10..89dee5f 100644 --- a/paper/setup.sh +++ b/paper/setup.sh @@ -48,13 +48,10 @@ if [[ ! -f $YGENOME ]]; then echo "Parsing genome..." YPARSER=../EpitopeID/utility_scripts/genome_data/parsers/parse_sacCer3_Genome_FASTA.pl perl $YPARSER S288C_reference_genome_R64-1-1_20110203/S288C_reference_sequence_R64-1-1_20110203.fsa $YGENOME - echo "Complete" echo "BWA Indexing genome..." bwa index $YGENOME - echo "Complete" echo "Bowtie2 Indexing genome..." bowtie2-build $YGENOME $YGENOME - echo "Complete" rm S288C_reference_genome_R64-1-1_20110203.tgz rm -r S288C_reference_genome_R64-1-1_20110203/ fi @@ -76,17 +73,39 @@ if [[ ! -f $HGENOME ]]; then chmod 777 twoBitToFa echo "Converting 2bit to fa..." ./twoBitToFa hg19.2bit $HGENOME.raw - echo "Complete" echo "Strip haplotypes..." python scripts/parse_hg19_Genome_FASTA.py $HGENOME.raw > $HGENOME - echo "Complete" echo "BWA Indexing genome..." bwa index $HGENOME + echo "Bowtie2 Indexing genome..." bowtie2-build $HGENOME $HGENOME echo "Complete" rm twoBitToFa hg19.2bit $HGENOME.raw fi + +# Download Human Genome (hg38) +HGENOME=input/hg38.fa +if [[ ! -f $HGENOME ]]; then + echo "**Human genome not found, downloading to $HGENOME..." + wget -N http://hgdownload.cse.ucsc.edu/goldenPath/hg38/bigZips/hg38.2bit + # Check for the existence of twoBitToFa, download if not present and make globally executable + if ! command -v twoBitToFa; then + unameOUT="$(uname -s)" + if [ $unameOUT == "Darwin" ]; then + wget -N http://hgdownload.soe.ucsc.edu/admin/exe/macOSX.x86_64/twoBitToFa + else + wget -N http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64.v369/twoBitToFa + fi + fi + chmod 777 twoBitToFa + echo "Converting 2bit to fa..." + ./twoBitToFa hg38.2bit $HGENOME + echo "BWA Indexing genome..." + bwa index $HGENOME + rm twoBitToFa hg38.2bit +fi + # Build Yeast EpiID with R500 YEPIDB=db/sacCer3_EpiID [ -d $YEPIDB ] || cp -r ../EpitopeID/sacCer3_EpiID/ $YEPIDB @@ -95,10 +114,8 @@ if [ ! -f $YEPIDB/FASTA_genome/genome.fa ]; then cp input/sacCer3.fa $YEPIDB/FASTA_genome/genome.fa echo "BWA Indexing genome..." bwa index $YEPIDB/FASTA_genome/genome.fa - echo "Complete" echo "Bowtie2 Indexing genome..." bowtie2-build $YEPIDB/FASTA_genome/genome.fa $YEPIDB/FASTA_genome/genome.fa - echo "Complete" fi echo "Setup Random Epitope for Yeast EpiID..." cp input/RAND_500.fa $YEPIDB/FASTA_tag/Tag_DB/ @@ -124,7 +141,6 @@ if [ ! -f $HEPIDB/FASTA_genome/genome.fa ]; then # echo "Complete" echo "Bowtie2 Indexing genome..." bowtie2-build $HEPIDB/FASTA_genome/genome.fa $HEPIDB/FASTA_genome/genome.fa - echo "Complete" fi echo "Setup Random Epitope for Human EpiID..." cp input/RAND_500.fa $HEPIDB/FASTA_tag/Tag_DB/ @@ -167,9 +183,18 @@ ln -s ../../DeletionID/sacCer3_Del cd $WRK # Add Yeast & Human StrainID DB to paper/db +cd $WRK/../StrainID +tar -xvf hg38_VCF +tar -xvf hg38_ENCODE +cd utility_scripts +bash generate_hg38_VariantDB.#!/bin/sh +mv hg38_DepMap ../ cd $WRK/db ln -s ../../StrainID/sacCer3_VCF ln -s ../../StrainID/hg19_VCF +ln -s ../../StrainID/hg38_VCF +ln -s ../../StrainID/hg38_ENCODE +ln -s ../../StrainID/hg38_DepMap cd $WRK # Setup color-space index for yeast genome