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resubmit.py
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resubmit.py
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#!/usr/bin/env python
"""
__modified__ = "Paola Rozo"
__version__ = "1.1"
__maintainer__ = "Paola Rozo"
__email__ = "katherine.rozo@cern.ch"
__status__ = "Testing"
This script clones or extends a given workflow
Usage:
python resubmit.py [options] WORKFLOW_NAME
Options:
-a --action, decides to clone or extend a workflow
-b --backfill, creates a clone
-v --verbose, prints schemas and responses
This script depends on WMCore code, so WMAgent environment,libraries and voms proxy need to be loaded before running it.
"""
import os
import pwd
import re
import sys
from optparse import OptionParser
from pprint import pprint
import dbs3Client
import reqMgrClient
reqmgrCouchURL = "https://cmsweb.cern.ch/couchdb/reqmgr_workload_cache"
DELTA_EVENTS = 1000
DELTA_LUMIS = 200
def modifySchema(cache, workflow, user, group, events, firstLumi, backfill=False, memory=None, timeperevent=None, filterEff=None, taskNumber=None, scramArch = None):
"""
Adapts schema to right parameters.
If the original workflow points to DBS2, DBS3 URL is fixed instead.
if backfill is True, modifies RequestString, ProcessingString, AcquisitionEra
and Campaign to say Backfill, and restarts requestDate.
"""
result = reqMgrClient.purgeClonedSchema( cache )
## then further drop nested arguments
taskParamBlacklist = [ 'EventsPerJob' ]
for i in range(1,100):
t='Task%s'%i
if not t in result: break
for p in taskParamBlacklist:
if p in result[t]:
result[t].pop( p )
if memory:
result['Memory'] = memory
if timeperevent:
result['TimePerEvent'] = timeperevent
if user:
result['Requestor'] = user
if group:
result['Group'] = group
# and required for cross-cloning between prod and testbed
if result.get('CouchURL'):
result['ConfigCacheUrl'] = result.pop('CouchURL')
#if we are extending the workflow
if events:
# extend workflow so it will safely start outside of the boundary
RequestNumEvents = int(result['RequestNumEvents'])
FirstEvent = int(result['FirstEvent'])
# FirstEvent_NEW > FirstEvent + RequestNumEvents
# the fist event needs to be oustide the range
result['FirstEvent'] = FirstEvent + RequestNumEvents + DELTA_EVENTS
# FirstLumi_NEW > FirstLumi + RequestNumEvents/events_per_job/filterEff
# same for the first lumi, needs to be after the last lumi
result['FirstLumi'] = firstLumi + DELTA_LUMIS
# only the desired events
result['RequestNumEvents'] = events
# prepend EXT_ to recognize as extension
result["RequestString"] = 'EXT_' + result["RequestString"]
else:
try:
#result["ProcessingVersion"] = int(helper.getProcessingVersion()) + 1
result["ProcessingVersion"] += 1
except ValueError:
result["ProcessingVersion"] = 2
# modify for backfill
if backfill:
# Modify ProcessingString, AcquisitionEra, Campaign and Request string (if they don't
# have the word 'backfill' in it
result["ProcessingString"] = "BACKFILL"
if isinstance(result["AcquisitionEra"],dict):
for eraName in result["AcquisitionEra"]:
if "backfill" not in result["AcquisitionEra"][eraName].lower():
result["AcquisitionEra"][eraName] = result["AcquisitionEra"][eraName] + "Backfill"
else:
if "backfill" not in result["AcquisitionEra"].lower():
result["AcquisitionEra"] = result["AcquisitionEra"] + "Backfill"
if "backfill" not in result["Campaign"].lower():
result["Campaign"] = result["Campaign"] + "-Backfill"
if "backfill" not in result["RequestString"].lower():
# Word backfill in the middle of the request strin
parts = result["RequestString"].split('-')
result["RequestString"] = '-'.join(parts[:2] + ["Backfill"] + parts[2:])
if "PrepID" in result:
# delete entry
del result["PrepID"]
if result["RequestType"] == 'TaskChain':
for taskNum in range(1, result['TaskChain'] + 1):
taskName = 'Task%s' % taskNum
if 'ProcessingString' in result[taskName]:
result[taskName]['ProcessingString'] = "BACKFILL"
if 'AcquisitionEra' in result[taskName]:
result[taskName]['AcquisitionEra'] += "Backfill"
# DataProcessing requests don't support RequestNumEvents argument anymore
if 'InputDataset' in result and result['InputDataset']:
result.pop('RequestNumEvents', None)
# Dirty check in TaskChain and StepChains
if 'Task1' in result and 'InputDataset' in result['Task1'] and result['Task1']['InputDataset']:
result['Task1'].pop('RequestNumEvents', None)
if 'Step1' in result and 'InputDataset' in result['Step1'] and result['Step1']['InputDataset']:
result['Step1'].pop('RequestNumEvents', None)
if filterEff:
if taskNumber:
if "RequestType" in result:
if result["RequestType"] == "StepChain":
stepName = "Step%s" % str(taskNumber)
else:
stepName = "Task%s" % str(taskNumber)
if stepName in result:
if "FilterEfficiency" in result[stepName]:
result[stepName]["FilterEfficiency"] = float(filterEff)
else:
raise Exception("There is no FilterEfficiency in %s" % stepName)
else:
raise Exception("There is no step called %s" % stepName)
else:
raise Exception("The Request Type is not identified")
else:
raise Exception("A task number should be provided for which to update filter efficiency")
# Assign a scramArch to all the tasks/steps
if scramArch and not taskNumber:
requestType = result["RequestType"]
prefix = requestType[:4]
nTasks = result[requestType]
for i in range(nTasks):
result[prefix + str(i + 1)]["ScramArch"] = scramArch
# Assign a given ScramArch to a given task
elif scramArch and taskNumber:
# Question: does the global scramArch have any use for taskchains and stepchains
if result["RequestType"] == "TaskChain":
result["Task" + str(taskNumber)]["ScramArch"] = scramArch
elif result["RequestType"] == "StepChain":
result["Step" + str(taskNumber)]["ScramArch"] = scramArch
else:
print("You're trying to change the scramArch in task level while the request isn't a task or stepchain")
sys.exit()
return result
def cloneWorkflow(workflow, user, group, verbose=True, backfill=False, testbed=False, memory=None, timeperevent=None, bwl=None, filterEff=None, taskNumber=None, scramArch=None):
"""
clones a workflow
"""
# Adapt schema and add original request to it
cache = reqMgrClient.getWorkflowInfo(url, workflow)
schema = modifySchema(cache, workflow, user, group, None, None, backfill, memory, timeperevent, filterEff, taskNumber, scramArch)
if verbose:
pprint(schema)
if bwl:
if 'Task1' in schema:
schema['Task1']['BlockWhitelist'] = bwl.split(',')
else:
schema['BlockWhitelist'] = bwl.split(',')
## only once
####schema['CMSSWVersion'] = 'CMSSW_8_0_16'
print 'Submitting workflow'
# Submit cloned workflow to ReqMgr
if testbed:
newWorkflow = reqMgrClient.submitWorkflow(url_tb, schema)
else:
newWorkflow = reqMgrClient.submitWorkflow(url, schema)
if verbose:
print "RESPONSE", newWorkflow
# find the workflow name in response
if newWorkflow:
print 'Cloned workflow: ' + newWorkflow
if verbose:
print newWorkflow
print 'Approving request response:'
# TODO only for debug
#response = reqMgrClient.setWorkflowSplitting(url, schema)
# print "RESPONSE", response
#schema['requestName'] = requestName
#schema['splittingTask'] = '/%s/%s' % (requestName, taskName)
#schema['splittingAlgo'] = splittingAlgo
# Move the request to Assignment-approved
if testbed:
data = reqMgrClient.setWorkflowApproved(url_tb, newWorkflow)
else:
data = reqMgrClient.setWorkflowApproved(url, newWorkflow)
if verbose:
print data
# return the name of new workflow
return newWorkflow
else:
if verbose:
print newWorkflow
else:
print "Couldn't clone the workflow."
return None
def getMissingEvents(workflow):
"""
Gets the missing events for the workflow
"""
inputEvents = reqMgrClient.getInputEvents(url, workflow)
dataset = reqMgrClient.outputdatasetsWorkflow(url, workflow).pop()
outputEvents = reqMgrClient.getOutputEvents(url, workflow, dataset)
return int(inputEvents) - int(outputEvents)
def extendWorkflow(workflow, user, group, verbose=False, events=None, firstlumi=None):
if events is None:
events = getMissingEvents(workflow)
events = int(events)
if firstlumi is None:
#get the last lumi of the dataset
dataset = reqMgrClient.outputdatasetsWorkflow(url, workflow).pop()
lastLumi = dbs3Client.getMaxLumi(dataset)
firstlumi = lastLumi
firstlumi = int(firstlumi)
# Get info about the workflow to be cloned
cache = reqMgrClient.getWorkflowInfo(url, workflow)
schema = modifySchema(cache, workflow, user, group, events, firstlumi, None)
if verbose:
pprint(schema)
print 'Submitting workflow'
# Submit cloned workflow to ReqMgr
response = reqMgrClient.submitWorkflow(url,schema)
if verbose:
print "RESPONSE", response
#find the workflow name in response
m = re.search("details\/(.*)\'",response)
if m:
newWorkflow = m.group(1)
print 'Cloned workflow: '+newWorkflow
print 'Extended with', events, 'events'
print response
# Move the request to Assignment-approved
print 'Approve request response:'
data = reqMgrClient.setWorkflowApproved(url, newWorkflow)
print data
else:
print response
"""
__Main__
"""
url = 'cmsweb.cern.ch'
url_tb = 'cmsweb-testbed.cern.ch'
reqmgrCouchURL = "https://" + url + "/couchdb/reqmgr_workload_cache"
def main():
# Create option parser
usage = "\n python %prog [options] [WORKFLOW_NAME]"\
"WORKFLOW_NAME: if the list file is provided this should be empty\n"
parser = OptionParser(usage=usage)
parser.add_option("-a", "--action", dest="action", default='clone',
help="There are two options clone (clone) or extend a worflow (extend) .")
parser.add_option("-u", "--user", dest="user",
help="User we are going to use", default=None)
parser.add_option("-g", "--group", dest="group", default='DATAOPS',
help="Group to send the workflows.")
parser.add_option("-b", "--backfill", action="store_true", dest="backfill", default=False,
help="Creates a clone for backfill test purposes.")
parser.add_option("-v", "--verbose", action="store_true", dest="verbose", default=False,
help="Prints all query information.")
parser.add_option('-f', '--file', help='Text file with a list of workflows', dest='file')
parser.add_option('--bwl', help='The block white list to be used', dest='bwl',default=None)
#Extend workflow options
parser.add_option('-e', '--events', help='# of events to add', dest='events')
parser.add_option('-l', '--firstlumi', help='# of the first lumi', dest='firstlumi')
parser.add_option("-m", "--memory", dest="memory", help="Set max memory for the event. At assignment, this will be used to calculate maxRSS = memory*1024")
parser.add_option("--TimePerEvent", help="Set the TimePerEvent on the clone")
parser.add_option("--testbed", action="store_true", dest="testbed", default=False,
help="Clone to testbed reqmgr insted of production")
parser.add_option('--filterEff', help='filter efficiency of given task/step', dest='filterEff', default=None)
parser.add_option('--taskNumber', help='taskNumber for which to change filterEff', dest='taskNumber', default=None)
parser.add_option('--scramArch', help='Add ScramArch on top of the existing one', dest='scramArch', default=None)
(options, args) = parser.parse_args()
# Check the arguments, get info from them
if options.file:
wfs = [l.strip() for l in open(options.file) if l.strip()]
elif len(args) > 0:
# name of workflow
wfs = [args[0]]
else:
parser.error("Provide the workflow of a file of workflows")
sys.exit(1)
if not options.user:
# get os username by default
uinfo = pwd.getpwuid(os.getuid())
user = uinfo.pw_name
else:
user = options.user
if options.action == 'clone':
for wf in wfs:
memory = None
timeperevent = None
workflow = reqMgrClient.Workflow(wf)
if options.memory:
memory = float(options.memory)
if options.TimePerEvent:
timeperevent = float(options.TimePerEvent)
cloneWorkflow(
wf, user, options.group, options.verbose, options.backfill, options.testbed, memory,timeperevent,bwl=options.bwl, filterEff=options.filterEff, taskNumber=options.taskNumber, scramArch = options.scramArch)
elif options.action == 'extend':
for wf in wfs:
extendWorkflow(wf, user, options.group, options.verbose, options.events, options.firstlumi)
sys.exit(0)
if __name__ == "__main__":
main()