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structure.txt
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Reproducible Research: a software engineering perspective
- Manifesto
Be explicit
Nothing is forever
- Part 1: Getting your Project up and Running
- Setting up a Software Project
Understand the project structure
src
test
documentation
data files
project meta data
Example: a Python Project
Example: a Java/Scala Project
Example: a Pharo Project
- The Essential Documentation
Describe your project
Choose name
Describe it
What is it? What is it useful for? Why should I use it?
Installation
How to use it
Examples
- Designing Library Interfaces
Split your code in Functions
Minimalistic APIs
Maximalistic APIs
An Object-Oriented Perspective
- Part 2: Getting Reproducible
Use a Version Control System
Use Semantic Versionning
Make your project dependencies explicit
Backpointer to Document the Installation Process
Packaging*
- Part 3: Embrace Automation
Automate dependency loading
e.g., setup.py pour les dependences
Automate testing
Create automated tests
Integration continue
Automate documentation Generation