From 57ca3e82b2de21e4d22e2d6deeded1a9bdfab56c Mon Sep 17 00:00:00 2001 From: Christian Gaser Date: Wed, 7 Aug 2024 11:03:35 +0200 Subject: [PATCH] Changed: Updated references. Changed paths: M CHANGES.txt M cat_vol_pbtsimple.m M doc/cat.txt M doc/index.html --- CHANGES.txt | 10 ++++++++++ cat_vol_pbtsimple.m | 4 ++-- doc/cat.txt | 2 +- doc/index.html | 9 +++++---- 4 files changed, 18 insertions(+), 7 deletions(-) diff --git a/CHANGES.txt b/CHANGES.txt index 2d962f66..6092b585 100644 --- a/CHANGES.txt +++ b/CHANGES.txt @@ -1,4 +1,14 @@ ------------------------------------------------------------------------ +r2596 | gaser | 2024-08-07 11:03:33 + +Changed paths: + M CHANGES.txt + M cat_vol_pbtsimple.m + M doc/cat.txt + M doc/index.html + +Changed: Updated references. +------------------------------------------------------------------------ r2595 | gaser | 2024-07-08 21:03:40 Changed paths: diff --git a/cat_vol_pbtsimple.m b/cat_vol_pbtsimple.m index 33885785..88dcef1b 100644 --- a/cat_vol_pbtsimple.m +++ b/cat_vol_pbtsimple.m @@ -231,7 +231,7 @@ % this still support some small benefits. % - Basic tests in ADHD200NYC and Collins. if opt.gyrusrecon == 0 - % Using the PBT apporach only to reconstruct the sulci. + % Using the PBT approach only to reconstruct the sulci. distcorval = 0.5; % in theory 0.5 % remove highly distant outliers @@ -240,7 +240,7 @@ % projection-based thickness mapping Ygmt = cat_vol_pbtp( round(Yp0) , Ywd, Ycd); - % now correct also this values (it is a bit better this way) + % now correct also these values (it is a bit better this way) Ycd = max(0,Ycd - distcorval); Ywd = max(0,Ywd - distcorval); % minimum to reduce issues with meninges diff --git a/doc/cat.txt b/doc/cat.txt index 12826cba..873716e3 100644 --- a/doc/cat.txt +++ b/doc/cat.txt @@ -33,7 +33,7 @@ Please cite our papers and the work of other researchers if you use this software.

Our main paper is:
Gaser C, Dahnke R, P.M. Thompson, Kurth K, Luders E, Alzheimer's Disease Neuroimaging Initiative.
- A Computational Anatomy Toolbox for the Analysis of Structural MRI Data. + CAT: a computational anatomy toolbox for the analysis of structural MRI data.

diff --git a/doc/index.html b/doc/index.html index a9ba6d4f..5a640041 100644 --- a/doc/index.html +++ b/doc/index.html @@ -3837,8 +3837,9 @@

Citing CAT12

If you use CAT12, please cite the following references in your work:

CAT12 (in General)
- Gaser C, Dahnke R, Thompson PM, Kurth F, Luders E, Alzheimer"s Disease Neuroimaging Initiative. - A Computational Anatomy Toolbox for the Analysis of Structural MRI Data. bioRxiv.

+ Gaser C, Dahnke R, Thompson PM, Kurth F, Luders E, Alzheimer"s Disease Neuroimaging Initiative (2024). + + CAT: a computational anatomy toolbox for the analysis of structural MRI data. GigaScience 13, giae049.

Surface Estimation
Dahnke R, Yotter RA, Gaser C. @@ -3954,8 +3955,8 @@

References

C. Gaser, I. Nenadic, B. Buchsbaum, E. Hazlett, M. S. Buchsbaum (2001). Deformation-based morphometry and its relation to conventional volumetry of brain lateral ventricles in MRI. Neuroimage 13:1140-1145.

-

C. Gaser, R. Dahnke, P.M. Thompson, F. Kurth, E. Luders, Alzheimer"s Disease Neuroimaging Initiative. - A Computational Anatomy Toolbox for the Analysis of Structural MRI Data. bioRxiv

+

C. Gaser, R. Dahnke, P.M. Thompson, F. Kurth, E. Luders, Alzheimer"s Disease Neuroimaging Initiative (2024). + CAT: a computational anatomy toolbox for the analysis of structural MRI data. GigaScience 13, giae049.

R. Dahnke, R. Yotter, C. Gaser (2012a). Cortical thickness and central surface estimation. Neuroimage 65: 336-348.