diff --git a/src/chanjo2/endpoints/coverage.py b/src/chanjo2/endpoints/coverage.py index 740c7c58..7260d9c5 100644 --- a/src/chanjo2/endpoints/coverage.py +++ b/src/chanjo2/endpoints/coverage.py @@ -185,9 +185,11 @@ def d4_genes_condensed_summary( for value in genes_coverage_completeness.values() ] condensed_stats[sample.name] = { - "mean_coverage": mean(genes_mean_coverage) if genes_mean_coverage else "NA", - "coverage_completeness": ( - mean(genes_coverage_completeness_values) + "mean_coverage": ( + round(mean(genes_mean_coverage), 2) if genes_mean_coverage else "NA" + ), + "coverage_completeness_percent": ( + round(mean(genes_coverage_completeness_values), 2) if genes_coverage_completeness_values else "NA" ),