artifact-detection.yaml

name: Artifact detection
name_short: artifact_detection
version: 1.0.0
namespace: diagnijmegen.artifact.detection
$schema: https://cytomine.com/schema-store/tasks/task.v0.json
authors:
  - first_name: Marina
    last_name: D'Amato
    organization: Radboudumc
    email: marina.damato@radboudumc.nl
    is_contact: true

configuration:
  input_folder: /home/user/data/images
  output_folder: /home/user/output
  image:
    file: /image.tar

inputs:
  tumor:
    display_name: wsi
    type: wsi
    description: Input wsi

outputs:
  output_scores:
    display_name: Scores
    type: file
    description: Output scores
  tumor_artifacts:
    display_name: Artifact masks
    type: wsi
    description: Output artifact masks
  tumor_tissue:
    display_name: Tissue masks
    type: wsi
    description: Output tissue masks