DESCRIPTION

Package: RNAseqAnalysis
Type: Package
Title: A List of Relevent Functions RNA-seq data analysis
Version: 0.1.0
Date: 2018-09-21
Author: Blessy M Baby
Maintainer: DISC <disc.iisr2000@gmail.com>
Description: The package RNAseqAnalysis does the complete analysis of RNA seq data starting from raw reads. It provides the user with differnt functions like generation of qc report, filtering,the assembly and annotation, differential expression analysis and heatmap.
License: MIT
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.4.0), BiocParallel, GenomicFeatures, Rqc, knitr, biomaRt, systemPipeR
Imports: utils, grDevices, AnnotationDbi, stats, graphics, ShortRead, lattice, gplots, RColorBrewer, edgeR, SummarizedExperiment, ASpli, ggplot2, easyRNASeq, GenomicAlignments, ape, DESeq2, vsn, pheatmap, qrqc
VignetteBuilder: knitr
Suggests: BiocStyle, knitr
biocViews: RNASeq
RoxygenNote: 6.0.1