NAMESPACE

# Generated by roxygen2: do not edit by hand

export(annotate)
export(countT)
export(filteR)
export(fqcR)
export(frqc)
export(gene_exp)
export(import_dataset)
export(splice)
import(ASpli)
import(AnnotationDbi)
import(BiocParallel)
import(DESeq2)
import(GenomicAlignments)
import(GenomicFeatures)
import(RColorBrewer)
import(Rqc)
import(ShortRead)
import(SummarizedExperiment)
import(biomaRt)
import(edgeR)
import(ggplot2)
import(gplots)
import(grDevices)
import(graphics)
import(knitr)
import(lattice)
import(pheatmap)
import(qrqc)
import(vsn)
importFrom(ape,as.phylo)
importFrom(ape,plot.phylo)
importFrom(easyRNASeq,BamFileList)
importFrom(easyRNASeq,assay)
importFrom(easyRNASeq,assays)
importFrom(stats,cor)
importFrom(stats,density)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(systemPipeR,GOCluster_Report)
importFrom(systemPipeR,GOHyperGAll)
importFrom(systemPipeR,alignStats)
importFrom(systemPipeR,filterDEGs)
importFrom(systemPipeR,goBarplot)
importFrom(systemPipeR,makeCATdb)
importFrom(systemPipeR,outpaths)
importFrom(systemPipeR,overLapper)
importFrom(systemPipeR,readComp)
importFrom(systemPipeR,returnRPKM)
importFrom(systemPipeR,runCommandline)
importFrom(systemPipeR,run_edgeR)
importFrom(systemPipeR,systemArgs)
importFrom(systemPipeR,targetsin)
importFrom(systemPipeR,vennPlot)
importFrom(utils,browseURL)
importFrom(utils,read.delim)
importFrom(utils,read.table)
importFrom(utils,write.table)