From a1d20ed06300dff72f3824139d5715bb6e2d5782 Mon Sep 17 00:00:00 2001
From: Noah Dove <nadove@ucsc.edu>
Date: Tue, 13 Dec 2022 15:45:53 -0800
Subject: [PATCH] Fix: AnVIL field size is inconsistently named (#4642)

---
 src/azul/plugins/metadata/anvil/__init__.py | 4 ++--
 test/integration_test.py                    | 2 +-
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/src/azul/plugins/metadata/anvil/__init__.py b/src/azul/plugins/metadata/anvil/__init__.py
index 65deb134a..9e26d3f08 100644
--- a/src/azul/plugins/metadata/anvil/__init__.py
+++ b/src/azul/plugins/metadata/anvil/__init__.py
@@ -155,8 +155,10 @@ def _field_mapping(self) -> MetadataPlugin._FieldMapping:
                             'file_id',
                             'data_modality',
                             'file_format',
+                            'file_size',
                             'file_md5sum',
                             'reference_assembly',
+                            'file_name',
                             # Not in schema
                             'crc32',
                             'sha256',
@@ -166,8 +168,6 @@ def _field_mapping(self) -> MetadataPlugin._FieldMapping:
                     # These field names are hard-coded in the implementation of
                     # the repository service/controller.
                     **{
-                        'file_size': 'size',
-                        'file_name': 'name',
                         # Not in schema
                         'version': 'fileVersion',
                         'uuid': 'fileId',
diff --git a/test/integration_test.py b/test/integration_test.py
index 2f376fd31..5af953fa0 100644
--- a/test/integration_test.py
+++ b/test/integration_test.py
@@ -564,7 +564,7 @@ def _get_one_file(self, catalog: CatalogName) -> JSON:
         if config.is_hca_enabled(catalog):
             file_size_facet = 'fileSize'
         elif config.is_anvil_enabled(catalog):
-            file_size_facet = 'size'
+            file_size_facet = 'file_size'
         else:
             assert False, catalog
         for filters in [self._fastq_filter(catalog), {}]: