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CHANGELOG.md

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1.1.3 - 2023-10-03

  • Downgrade notebook to 6.5.4 and jupyterlab-server to 2.23.0

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.1.3

1.1.2 - 2023-07-31

  • Upgrade Terra Notebook Utils to 0.13.0

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.1.2

1.1.1 - 2023-07-06

1.1.0 - 2023-06-23

  • Upgrade python 3.7 to 3.10

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.1.0

1.0.14 - 2023-03-13T17:26:34.128391Z

  • Include jupyter lab build step

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.14

1.0.13 - 2023-03-09

  • Include jupyter lab build step

1.0.12 - 2023-02-09T14:18:48.948718Z

  • Add cloud.google.com gpg key.

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.12

1.0.11 - 2022-06-23T10:58:12.961300Z

  • Fix leo_url variable in workspace_cromwell.py script for AoU projects

1.0.10 - 2022-06-03T18:35:22.582705Z

  • reverted, do not use

1.0.9 - 2022-05-20T18:06:39.404395Z

  • Fix adding workspace_cromwell.py script to manage Cromwell App

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.9

1.0.8 - 2022-05-17T17:14:41.200567Z

  • Add script that manages Cromwell app

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.8

1.0.7 - 2022-05-10T22:08:25.901765Z

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.7

1.0.6 - 2022-05-02T14:33:23.893656Z

  • use new nvidia key

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.6

1.0.5 - 2022-04-17

  • Install gcloud alpha storage dependency

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.5

1.0.4 - 2022-02-02T20:47:42.308006Z

  • update notebook_dir to $HOME

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.4

1.0.3 - 2022-01-06T18:21:41.124056Z

  • Bumping Google Deeplearning image to 2.7, removing gcc-6 and gcc-8 install due to package problems

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.3

1.0.2 - 2021-10-07T14:47:43.325878Z

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.2

1.0.1 - 2021-09-10T15:10:44.047182Z

  • Update base image to gcr.io/deeplearning-platform-release/tf2-gpu.2-6 to support TensorFlow 2.6.0
  • Fix multipart Jupyter uploads

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.1

1.0.0 - 2021-06-09T16:18:53.734840Z

  • use gcr.io/deeplearning-platform-release/base-cu110:latest as base

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.0.0

0.0.20 - 2021-05-05T16:19:57.444846Z

  • [IA-1644] Install crcmod in base image to support GCS composite objects

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.20

0.0.19 - 2021-01-20T16:00:48.255Z

  • [IA-2472] Turn on debug-level logging when JUPYTER_DEBUG_LOGGING env var is true

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.19

0.0.18 - 2020-12-02T17:59:36.345Z

  • bump terra-notebook-utils version to 0.7.0 and move it to base image

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.18

0.0.17 - 2020-11-16T18:11:40.717364Z

  • remove miniconda

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.17

0.0.16 - 2020-10-26T20:13:57.592Z

  • add keychain to base image

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.16

0.0.15 - 2020-10-08T18:42:19.647Z

  • include pip binary installation location in PATH

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.15

0.0.14 - 2020-09-02T15:12:19.821Z

  • Terminal now opens to /notebooks directory where PD is mounted

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.14

0.0.13 - 2020-08-18T13:43:26.123Z

  • update notebook to 6.1.1, tornado to 5.1.1

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.13

0.0.12 - 07/27/2020

  • Fix issue where packages with CLI functionality were not available on path

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.12

0.0.11 - 06/15/2020

  • Add terra-notebook-utils to base image
  • Add /home/jupyter-user/notebooks/packages to PYTHONPATH so user package installs persist using PDs

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.11

0.0.10 - 05/18/2020

  • Adds jupyter notebook extension collapsible headers and code-folding

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.10

0.0.9 - 02/25/2020

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.9

0.0.8 - 02/05/2020

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.8

0.0.7 - 01/17/2020

  • Make image locally runnable with:
    • docker run --rm -it -p 8000:8000 <image>
  • Add FISS to base image
  • Add OpenJDK 11 to base image

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.7

0.0.6 - 11/26/2019

  • Fix WORKSPACE_BUCKET environment variable

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.6

0.0.5 - 11/16/2019

  • Remove apt-get upgrade for security purposes

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.5

0.0.4 - 10/18/2019

  • Fix a bug in google_sign_in.js
  • Fix WORKSPACE_NAME environment variable

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.4

0.0.3 - 10/09/2019

Check Metadata and lock interval on extension are now staggered

0.0.2 - 10/01/2019

Lint the .js extension files

0.0.1 - 08/21/2019

  • Extends Ubuntu base image
  • Add google-cloud-sdk
  • Add Python 3.7
  • Add pip
  • Add conda
  • Add Jupyter & JupyterLab
  • Add Leonardo customizations/extensions

Image URL: us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:0.0.1