From 037cbc3c33fcaff2a2b04b835af3c8b3c065b2e7 Mon Sep 17 00:00:00 2001 From: Mostafa Farrag Date: Thu, 12 Dec 2024 14:07:47 +0100 Subject: [PATCH] feat: initial condition converter from old external forcing file feat: initial condition converter from old external forcing file --- .flake8 | 1 - hydrolib/core/basemodel.py | 8 +- hydrolib/core/dflowfm/ext/models.py | 23 +- hydrolib/core/dflowfm/extold/models.py | 78 +- hydrolib/core/dflowfm/ini/models.py | 4 +- hydrolib/core/dflowfm/inifield/models.py | 4 +- hydrolib/core/dimr/models.py | 18 +- .../tools/ext_old_to_new/converter_factory.py | 10 +- .../initial_condition_converter.py | 75 + .../tools/ext_old_to_new/main_converter.py | 66 +- hydrolib/tools/ext_old_to_new/utils.py | 9 +- poetry.lock | 2589 +++++++++++------ pyproject.toml | 64 +- tests/conftest.py | 154 + ...ternal-forcing-initial-contitions-only.ext | 83 + tests/data/input/old-external-forcing.ext | 147 + tests/dflowfm/test_ext.py | 277 +- tests/dflowfm/test_extold.py | 73 +- tests/dflowfm/test_inifield.py | 141 +- tests/dflowfm/test_net.py | 2 +- tests/dflowfm/test_research.py | 1 + tests/rr/test_fnm.py | 21 +- tests/rr/topology/test_serializer.py | 14 +- tests/test_basemodel.py | 10 +- tests/test_model.py | 11 +- tests/tools/test_converters.py | 35 + tests/tools/test_ext_old_to_new.py | 63 - tests/tools/test_main_converter.py | 111 + tests/tools/test_tools_utils.py | 16 + 29 files changed, 2977 insertions(+), 1131 deletions(-) delete mode 100644 .flake8 create mode 100644 hydrolib/tools/ext_old_to_new/initial_condition_converter.py create mode 100644 tests/conftest.py create mode 100644 tests/data/input/old-external-forcing-initial-contitions-only.ext create mode 100644 tests/data/input/old-external-forcing.ext create mode 100644 tests/tools/test_converters.py delete mode 100644 tests/tools/test_ext_old_to_new.py create mode 100644 tests/tools/test_main_converter.py create mode 100644 tests/tools/test_tools_utils.py diff --git a/.flake8 b/.flake8 deleted file mode 100644 index 919baa24b..000000000 --- a/.flake8 +++ /dev/null @@ -1 +0,0 @@ -max_line_length = 88 \ No newline at end of file diff --git a/hydrolib/core/basemodel.py b/hydrolib/core/basemodel.py index b2d853a09..79e9492ab 100644 --- a/hydrolib/core/basemodel.py +++ b/hydrolib/core/basemodel.py @@ -513,7 +513,9 @@ class ModelSaveSettings: _os_path_style = get_path_style_for_current_operating_system() - def __init__(self, path_style: Optional[PathStyle] = None, exclude_unset: bool = False) -> None: + def __init__( + self, path_style: Optional[PathStyle] = None, exclude_unset: bool = False + ) -> None: """Initializes a new instance of the ModelSaveSettings class. Args: @@ -1054,7 +1056,9 @@ def save( self.filepath = filepath path_style = path_style_validator.validate(path_style) - save_settings = ModelSaveSettings(path_style=path_style, exclude_unset=exclude_unset) + save_settings = ModelSaveSettings( + path_style=path_style, exclude_unset=exclude_unset + ) # Handle save with file_load_context() as context: diff --git a/hydrolib/core/dflowfm/ext/models.py b/hydrolib/core/dflowfm/ext/models.py index 8209dad4c..052a7e4e9 100644 --- a/hydrolib/core/dflowfm/ext/models.py +++ b/hydrolib/core/dflowfm/ext/models.py @@ -10,12 +10,7 @@ ) from hydrolib.core.dflowfm.bc.models import ForcingBase, ForcingData, ForcingModel from hydrolib.core.dflowfm.common.models import Operand -from hydrolib.core.dflowfm.ini.models import ( - INIBasedModel, - INIGeneral, - INIModel, - INISerializerConfig, -) +from hydrolib.core.dflowfm.ini.models import INIBasedModel, INIGeneral, INIModel from hydrolib.core.dflowfm.ini.serializer import INISerializerConfig from hydrolib.core.dflowfm.ini.util import ( LocationValidationConfiguration, @@ -102,7 +97,7 @@ def _get_identifier(self, data: dict) -> Optional[str]: return data.get("nodeid") @property - def forcing(self) -> ForcingBase: + def forcing(self) -> Union[ForcingBase, None]: """Retrieves the corresponding forcing data for this boundary. Returns: @@ -214,7 +209,7 @@ class MeteoForcingFileType(StrEnum): netcdf = "netcdf" """str: NetCDF, either with gridded data, or multiple station time series.""" - allowedvaluestext = "Possible values: bcAscii, netcdf, uniform." + allowedvaluestext = "Possible values: bcAscii, uniform, uniMagDir, meteoGridEqui, spiderweb, meteoGridCurvi, netcdf." class MeteoInterpolationMethod(StrEnum): @@ -224,10 +219,10 @@ class MeteoInterpolationMethod(StrEnum): """ nearestnb = "nearestNb" - linearSpaceTime = "linearSpaceTime" """str: Nearest-neighbour interpolation, only with station-data in forcingFileType=netcdf""" - - allowedvaluestext = "Possible values: nearestNb (only with station data in forcingFileType=netcdf ). " + linearSpaceTime = "linearSpaceTime" + """str: Linear interpolation in space and time.""" + allowedvaluestext = "Possible values: nearestNb, linearSpaceTime." class Meteo(INIBasedModel): @@ -345,9 +340,9 @@ class ExtModel(INIModel): """ general: ExtGeneral = ExtGeneral() - boundary: List[Boundary] = [] - lateral: List[Lateral] = [] - meteo: List[Meteo] = [] + boundary: List[Boundary] = Field(default_factory=list) + lateral: List[Lateral] = Field(default_factory=list) + meteo: List[Meteo] = Field(default_factory=list) serializer_config: INISerializerConfig = INISerializerConfig( section_indent=0, property_indent=0 ) diff --git a/hydrolib/core/dflowfm/extold/models.py b/hydrolib/core/dflowfm/extold/models.py index b8ae8062a..bd24af00c 100644 --- a/hydrolib/core/dflowfm/extold/models.py +++ b/hydrolib/core/dflowfm/extold/models.py @@ -18,6 +18,14 @@ from hydrolib.core.dflowfm.polyfile.models import PolyFile from hydrolib.core.dflowfm.tim.models import TimModel +INITIAL_CONDITION_QUANTITIES_VALID_PREFIXES = ( + "initialtracer", + "initialsedfrac", + "initialverticalsedfracprofile", + "initialverticalsigmasedfracprofile", +) + + HEADER = """ QUANTITY : waterlevelbnd, velocitybnd, dischargebnd, tangentialvelocitybnd, normalvelocitybnd filetype=9 method=2,3 : outflowbnd, neumannbnd, qhbnd, uxuyadvectionvelocitybnd filetype=9 method=2,3 @@ -151,7 +159,7 @@ class ExtOldBoundaryQuantity(StrEnum): NormalVelocityBnd = "normalvelocitybnd" """Normal velocity""" TangentialVelocityBnd = "tangentialvelocitybnd" - """Tangentional velocity""" + """Tangential velocity""" QhBnd = "qhbnd" """Discharge-water level dependency""" @@ -223,6 +231,62 @@ class ExtOldMeteoQuantity(StrEnum): """Dewpoint temperature""" +class ExtOldInitialConditionQuantity(StrEnum): + """ + Initial Condition quantities: + initialwaterlevel, initialsalinity, initialsalinitytop, initialtemperature, + initialverticaltemperatureprofile, initialverticalsalinityprofile, initialvelocityx, + initialvelocityy, initialvelocity + + If there is a missing quantity that is mentioned in the "Accepted quantity names" section of the user manual + [Sec.C.5.3](https://content.oss.deltares.nl/delft3dfm1d2d/D-Flow_FM_User_Manual_1D2D.pdf#subsection.C.5.3). + and [Sec.D.3](https://content.oss.deltares.nl/delft3dfm1d2d/D-Flow_FM_User_Manual_1D2D.pdf#subsection.D.3). + please open and issue in github. + """ + + # Initial Condition fields + BedLevel = "bedlevel" + BedLevel1D = "bedlevel1D" + BedLevel2D = "bedlevel2D" + + InitialWaterLevel = "initialwaterlevel" + InitialWaterLevel1D = "initialwaterlevel1d" + InitialWaterLevel2D = "initialwaterlevel2d" + + InitialSalinity = "initialsalinity" + InitialSalinityTop = "initialsalinitytop" + InitialSalinityBot = "initialsalinitybot" + InitialVerticalSalinityProfile = "initialverticalsalinityprofile" + + InitialTemperature = "initialtemperature" + InitialVerticalTemperatureProfile = "initialverticaltemperatureprofile" + + initialUnsaturatedZoneThickness = "initialunsaturatedzonethickness" + InitialVelocityX = "initialvelocityx" + InitialVelocityY = "initialvelocityy" + InitialVelocity = "initialvelocity" + InitialWaqBot = "initialwaqbot" + + @classmethod + def _missing_(cls, value): + """Custom implementation for handling missing values. + + the method parses any missing values and only allows the ones that start with "initialtracer". + """ + # Allow strings starting with "tracer" + if isinstance(value, str) and value.startswith( + INITIAL_CONDITION_QUANTITIES_VALID_PREFIXES + ): + new_member = str.__new__(cls, value) + new_member._value_ = value + return new_member + else: + raise ValueError( + f"{value} is not a valid {cls.__name__} possible quantities are {', '.join(cls.__members__)}, " + f"and quantities that start with 'tracer'" + ) + + class ExtOldQuantity(StrEnum): """Enum class containing the valid values for the boundary conditions category of the external forcings. @@ -459,7 +523,7 @@ class ExtOldForcing(BaseModel): filetype: ExtOldFileType = Field(alias="FILETYPE") """FileType: Indication of the file type. - + Options: 1. Time series 2. Time series magnitude and direction @@ -476,7 +540,7 @@ class ExtOldForcing(BaseModel): method: ExtOldMethod = Field(alias="METHOD") """ExtOldMethod: The method of interpolation. - + Options: 1. Pass through (no interpolation) 2. Interpolate time and space @@ -502,8 +566,8 @@ class ExtOldForcing(BaseModel): operand: Operand = Field(alias="OPERAND") """Operand: The operand to use for adding the provided values. - - Options: + + Options: 'O' Existing values are overwritten with the provided values. 'A' Provided values are used where existing values are missing. '+' Existing values are summed with the provided values. @@ -685,9 +749,9 @@ class ExtOldModel(ParsableFileModel): This model is typically referenced under a [FMModel][hydrolib.core.dflowfm.mdu.models.FMModel]`.external_forcing.extforcefile`. """ - comment: List[str] = HEADER.splitlines()[1:] + comment: List[str] = Field(default=HEADER.splitlines()[1:]) """List[str]: The comments in the header of the external forcing file.""" - forcing: List[ExtOldForcing] = [] + forcing: List[ExtOldForcing] = Field(default_factory=list) """List[ExtOldForcing]: The external forcing/QUANTITY blocks in the external forcing file.""" @classmethod diff --git a/hydrolib/core/dflowfm/ini/models.py b/hydrolib/core/dflowfm/ini/models.py index 8670521a8..c3d9d7cf2 100644 --- a/hydrolib/core/dflowfm/ini/models.py +++ b/hydrolib/core/dflowfm/ini/models.py @@ -232,7 +232,9 @@ def _to_section( props.append(prop) return Section(header=self._header, content=props) - def _should_be_serialized(self, key: str, value: Any, save_settings: ModelSaveSettings) -> bool: + def _should_be_serialized( + self, key: str, value: Any, save_settings: ModelSaveSettings + ) -> bool: if key in self._exclude_fields(): return False diff --git a/hydrolib/core/dflowfm/inifield/models.py b/hydrolib/core/dflowfm/inifield/models.py index 29598e4f1..eb44942e5 100644 --- a/hydrolib/core/dflowfm/inifield/models.py +++ b/hydrolib/core/dflowfm/inifield/models.py @@ -216,8 +216,8 @@ class IniFieldModel(INIModel): """ general: IniFieldGeneral = IniFieldGeneral() - initial: List[InitialField] = [] - parameter: List[ParameterField] = [] + initial: List[InitialField] = Field(default_factory=list) + parameter: List[ParameterField] = Field(default_factory=list) _split_to_list = make_list_validator("initial", "parameter") diff --git a/hydrolib/core/dimr/models.py b/hydrolib/core/dimr/models.py index 0a2fe6d94..84cc791c3 100644 --- a/hydrolib/core/dimr/models.py +++ b/hydrolib/core/dimr/models.py @@ -53,8 +53,8 @@ class Component(BaseModel, ABC): workingDir: Path inputFile: Path process: Optional[int] - setting: Optional[List[KeyValuePair]] = [] - parameter: Optional[List[KeyValuePair]] = [] + setting: Optional[List[KeyValuePair]] = Field(default_factory=list) + parameter: Optional[List[KeyValuePair]] = Field(default_factory=list) mpiCommunicator: Optional[str] model: Optional[FileModel] @@ -225,7 +225,7 @@ class Coupler(BaseModel): name: str sourceComponent: str targetComponent: str - item: List[CoupledItem] = [] + item: List[CoupledItem] = Field(default_factory=list) logger: Optional[Logger] @validator("item", pre=True) @@ -252,8 +252,8 @@ class StartGroup(BaseModel): """ time: str - start: List[ComponentOrCouplerRef] = [] - coupler: List[ComponentOrCouplerRef] = [] + start: List[ComponentOrCouplerRef] = Field(default_factory=list) + coupler: List[ComponentOrCouplerRef] = Field(default_factory=list) @validator("start", "coupler", pre=True) def validate_start(cls, v): @@ -336,9 +336,11 @@ class DIMR(ParsableFileModel): """ documentation: Documentation = Documentation() - control: List[Union[Start, Parallel]] = Field([]) - component: List[Union[RRComponent, FMComponent, Component]] = [] - coupler: Optional[List[Coupler]] = [] + control: List[Union[Start, Parallel]] = Field(default_factory=list) + component: List[Union[RRComponent, FMComponent, Component]] = Field( + default_factory=list + ) + coupler: Optional[List[Coupler]] = Field(default_factory=list) waitFile: Optional[str] global_settings: Optional[GlobalSettings] diff --git a/hydrolib/tools/ext_old_to_new/converter_factory.py b/hydrolib/tools/ext_old_to_new/converter_factory.py index cb5cde8c6..73af063b9 100644 --- a/hydrolib/tools/ext_old_to_new/converter_factory.py +++ b/hydrolib/tools/ext_old_to_new/converter_factory.py @@ -1,4 +1,10 @@ -from hydrolib.core.dflowfm.extold.models import ExtOldMeteoQuantity +from hydrolib.core.dflowfm.extold.models import ( + ExtOldInitialConditionQuantity, + ExtOldMeteoQuantity, +) +from hydrolib.tools.ext_old_to_new.initial_condition_converter import ( + InitialConditionConverter, +) from .base_converter import BaseConverter from .meteo_converter import MeteoConverter @@ -34,5 +40,7 @@ def create_converter(quantity) -> BaseConverter: """ if __contains__(ExtOldMeteoQuantity, quantity): return MeteoConverter() + if __contains__(ExtOldInitialConditionQuantity, quantity): + return InitialConditionConverter() else: raise ValueError(f"No converter available for QUANTITY={quantity}.") diff --git a/hydrolib/tools/ext_old_to_new/initial_condition_converter.py b/hydrolib/tools/ext_old_to_new/initial_condition_converter.py new file mode 100644 index 000000000..ecebbc9c7 --- /dev/null +++ b/hydrolib/tools/ext_old_to_new/initial_condition_converter.py @@ -0,0 +1,75 @@ +from hydrolib.core.basemodel import DiskOnlyFileModel +from hydrolib.core.dflowfm.extold.models import ExtOldForcing +from hydrolib.core.dflowfm.inifield.models import InitialField, InterpolationMethod +from hydrolib.tools.ext_old_to_new.base_converter import BaseConverter +from hydrolib.tools.ext_old_to_new.enum_converters import ( + oldfiletype_to_forcing_file_type, + oldmethod_to_averaging_type, + oldmethod_to_interpolation_method, +) + + +class InitialConditionConverter(BaseConverter): + def __init__(self): + super().__init__() + + def convert(self, forcing: ExtOldForcing) -> InitialField: + """Convert an old external forcing block with Initial condition data to a InitialField + forcing block suitable for inclusion in a new inifieldfile file. + + + This function takes a forcing block from an old external forcings + file, represented by an instance of ExtOldForcing, and converts it + into a InitialField object. The InitialField object is suitable for use in new + iniFieldFile, adhering to the updated format and specifications. + + Args: + forcing (ExtOldForcing): The contents of a single forcing block + in an old external forcings file. This object contains all the + necessary information, such as quantity, values, and timestamps, + required for the conversion process. + + Returns: + Initial condition field definition, represents an `[Initial]` block in an inifield file. + + Raises: + ValueError: If the forcing block contains a quantity that is not + supported by the converter, a ValueError is raised. This ensures + that only compatible forcing blocks are processed, maintaining + data integrity and preventing errors in the conversion process. + + References: + [Sec.D](https://content.oss.deltares.nl/delft3dfm1d2d/D-Flow_FM_User_Manual_1D2D.pdf#subsection.D) + """ + block_data = { + "quantity": forcing.quantity, + "datafile": forcing.filename, + "datafiletype": oldfiletype_to_forcing_file_type(forcing.filetype), + } + if block_data["datafiletype"] == "polygon": + block_data["value"] = forcing.value + + if forcing.sourcemask != DiskOnlyFileModel(None): + raise ValueError( + f"Attribute 'SOURCEMASK' is no longer supported, cannot " + f"convert this input. Encountered for QUANTITY=" + f"{forcing.quantity} and FILENAME={forcing.filename}." + ) + block_data["interpolationmethod"] = oldmethod_to_interpolation_method( + forcing.method + ) + if block_data["interpolationmethod"] == InterpolationMethod.averaging: + block_data["averagingtype"] = oldmethod_to_averaging_type(forcing.method) + block_data["averagingrelsize"] = forcing.relativesearchcellsize + block_data["averagingnummin"] = forcing.nummin + block_data["averagingpercentile"] = forcing.percentileminmax + block_data["operand"] = forcing.operand + + if hasattr(forcing, "extrapolation"): + block_data["extrapolationmethod"] = forcing.extrapolation + if hasattr(forcing, "locationtype"): + block_data["locationtype"] = forcing.locationtype + + new_block = InitialField(**block_data) + + return new_block diff --git a/hydrolib/tools/ext_old_to_new/main_converter.py b/hydrolib/tools/ext_old_to_new/main_converter.py index be04e9636..a9a761c36 100644 --- a/hydrolib/tools/ext_old_to_new/main_converter.py +++ b/hydrolib/tools/ext_old_to_new/main_converter.py @@ -1,39 +1,27 @@ import argparse -import math import os -import re import sys from pathlib import Path -from typing import Dict, List, Literal, Optional, Tuple - -from pydantic import Extra, FilePath +from typing import Tuple, Union from hydrolib.core import __version__ from hydrolib.core.basemodel import PathOrStr -from hydrolib.core.dflowfm import FMModel -from hydrolib.core.dflowfm.ext.models import ( - Boundary, - ExtModel, - Lateral, - Meteo, - MeteoForcingFileType, - MeteoInterpolationMethod, -) -from hydrolib.core.dflowfm.extold.models import * +from hydrolib.core.dflowfm.ext.models import Boundary, ExtModel, Lateral, Meteo +from hydrolib.core.dflowfm.extold.models import ExtOldModel from hydrolib.core.dflowfm.inifield.models import ( - AveragingType, - DataFileType, IniFieldModel, InitialField, - InterpolationMethod, ParameterField, ) from hydrolib.core.dflowfm.mdu.legacy import LegacyFMModel -from hydrolib.core.dflowfm.mdu.models import General from hydrolib.core.dflowfm.structure.models import Structure, StructureModel from .converter_factory import ConverterFactory -from .utils import backup_file, construct_filemodel_new_or_existing, construct_filepath_with_postfix +from .utils import ( + backup_file, + construct_filemodel_new_or_existing, + construct_filepath_with_postfix, +) _program: str = "ext_old_to_new" _verbose: bool = False @@ -47,7 +35,8 @@ def _read_ext_old_data(extoldfile: PathOrStr) -> ExtOldModel: extoldfile (PathOrStr): path to the external forcings file (.ext) Returns: - ExtOldModel: object with all forcing blocks.""" + ExtOldModel: object with all forcing blocks. + """ global _verbose extold_model = ExtOldModel(extoldfile) @@ -64,8 +53,7 @@ def ext_old_to_new( inifieldfile: PathOrStr = None, structurefile: PathOrStr = None, backup: bool = False, - postfix: str = "", -) -> Tuple[ExtOldModel, ExtModel, IniFieldModel, StructureModel]: +) -> Union[Tuple[ExtOldModel, ExtModel, IniFieldModel, StructureModel], None]: """ Convert old external forcing file to new format files. When the output files are existing, output will be appended to them. @@ -77,11 +65,10 @@ def ext_old_to_new( structurefile (PathOrStr, optional): Path to the structure file. backup (bool, optional): Create a backup of each file that will be overwritten. - postfix (str, optional): Append POSTFIX to the output filenames. Defaults to "". Returns: Tuple[ExtOldModel, ExtModel, IniFieldModel, StructureModel]: - The updated models (already written to disk). Maybe used + The updated models (already written to disk). Maybe used at call site to inspect the updated models. """ @@ -131,8 +118,6 @@ def ext_old_to_new( f"Unsupported model class {type(new_quantity_block)} for {forcing.quantity} in {extoldfile}." ) - print(new_quantity_block) - backup_file(ext_model.filepath, backup) ext_model.save() @@ -144,6 +129,7 @@ def ext_old_to_new( return extold_model, ext_model, inifield_model, structure_model + def ext_old_to_new_from_mdu( mdufile: PathOrStr, extfile: PathOrStr = "forcings.ext", @@ -186,12 +172,9 @@ def ext_old_to_new_from_mdu( workdir = fmmodel._resolved_filepath.parent os.chdir(workdir) - if fmmodel.external_forcing.extforcefile is None: - if _verbose: - print( - f"mdufile: {mdufile} does not contain an old style external forcing file" - ) - return + if fmmodel.external_forcing.extforcefile is None and _verbose: + print(f"mdufile: {mdufile} does not contain an old style external forcing file") + return # Input file: extoldfile = fmmodel.external_forcing.extforcefile._resolved_filepath # Output files: @@ -212,7 +195,9 @@ def ext_old_to_new_from_mdu( ) # The actual conversion: - extold_model, ext_model, inifield_model, structure_model = ext_old_to_new(extoldfile, extfile, inifieldfile, structurefile, backup, postfix) + extold_model, ext_model, inifield_model, structure_model = ext_old_to_new( + extoldfile, extfile, inifieldfile, structurefile, backup + ) try: # And include the new files in the FM model: _ = ExtModel(extfile) @@ -237,9 +222,8 @@ def ext_old_to_new_from_mdu( print("The converter did not produce a valid ext file:", error) return -def ext_old_to_new_dir_recursive( - dir: PathOrStr, backup: bool = True -): + +def ext_old_to_new_dir_recursive(dir: PathOrStr, backup: bool = True): for path in Path(dir).rglob("*.mdu"): if "_ext" not in path.name: @@ -332,11 +316,13 @@ def main(args=None): outfiles["structurefile"] = args.outfiles[2] if args.mdufile is not None: - ext_old_to_new_from_mdu(args.mdufile, **outfiles, backup=backup, postfix=args.postfix) + ext_old_to_new_from_mdu( + args.mdufile, **outfiles, backup=backup, postfix=args.postfix + ) elif args.extoldfile is not None: - ext_old_to_new(args.extoldfile, **outfiles, backup=backup, postfix=args.postfix) + ext_old_to_new(args.extoldfile, **outfiles, backup=backup) elif args.dir is not None: - ext_old_to_new_dir_recursive(args.dir, backup=backup, postfix=args.postfix) + ext_old_to_new_dir_recursive(args.dir, backup=backup) else: print("Error: no input specified. Use one of --mdufile, --extoldfile or --dir.") diff --git a/hydrolib/tools/ext_old_to_new/utils.py b/hydrolib/tools/ext_old_to_new/utils.py index ba924c25d..d183f3c30 100644 --- a/hydrolib/tools/ext_old_to_new/utils.py +++ b/hydrolib/tools/ext_old_to_new/utils.py @@ -5,7 +5,7 @@ def construct_filemodel_new_or_existing( - ModelClass: Type[FileModel], filepath: PathOrStr, *args, **kwargs + model_class: Type[FileModel], filepath: PathOrStr, *args, **kwargs ) -> FileModel: """Construct a new instance of a FileModel subclass, either loading an existing model file, or starting a blank one. @@ -15,15 +15,15 @@ def construct_filemodel_new_or_existing( will only have its filepath attribute set, e.g., for future saving. Args: - ModelClass (type[FileModel]): The FileModel subclass to construct or update. + model_class (type[FileModel]): The FileModel subclass to construct or update. filepath (PathOrStr): The filepath to use for the new or existing model input. *args: Additional positional arguments to pass to the ModelClass constructor **kwargs: Additional keywords arguments to pass to the ModelClass constructor """ if Path(filepath).is_file(): - model = ModelClass(filepath=filepath, *args, **kwargs) + model = model_class(filepath=filepath, *args, **kwargs) else: - model = ModelClass(*args, **kwargs) + model = model_class(*args, **kwargs) model.filepath = filepath return model @@ -61,4 +61,3 @@ def construct_filepath_with_postfix(filepath: PathOrStr, postfix: str) -> Path: """ file_as_path = Path(filepath) return file_as_path.with_stem(file_as_path.stem + postfix) - diff --git a/poetry.lock b/poetry.lock index 08b6ca131..419581ffc 100644 --- a/poetry.lock +++ b/poetry.lock @@ -13,24 +13,24 @@ files = [ [[package]] name = "anyio" -version = "4.6.2.post1" +version = "4.7.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" optional = false python-versions = ">=3.9" files = [ - 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-isort = "^5.8" -devtools = "^0.6.1" -mkdocs = "^1.2" -mkdocs-material = "^8.0" -mkdocstrings = "^0.16" -mkdocs-autorefs = "^0.3, !=0.3.1" -mkdocs-macros-plugin = "^0.6.3" -mkdocs-table-reader-plugin = "^0.6.1" -mkdocs-jupyter = "^0.21.0" -pymdown-extensions = "^9.1" -commitizen = "^2.17" -flake8 = "^3.9.2" -mypy = "^0.910" +pytest-cov = "^6.0" +devtools = "^0.12.2" +commitizen = "^4.0" +mypy = "^1.13" openpyxl = "^3.0.9" -mike = "^1.1.2" +mike = "^2.1.3" jinja2 = "^3.0" -markupsafe = "<2.1" +markupsafe = "<3.0.2" jupyter = "^1.0.0" ipykernel = "^6.15.0" # matplotlib >=3.8 supports numpy 2.0 @@ -53,6 +42,34 @@ matplotlib = "^3.8" # xarray >=2024.6.0 supports numpy 2.0, but consider looser version if adding it as actual package dependencies xarray = ">=2024.6.0" +[tool.poetry.group.docs.dependencies] +mkdocs = "^1.2" +mkdocs-material = "^9.5" +mkdocstrings = "^0.27.0" +pymdown-extensions = "^10.12" +mkdocs-autorefs = "^1.2" +mkdocs-macros-plugin = "^1.3.7" +mkdocs-table-reader-plugin = "^3.1.0" +mkdocs-jupyter = "^0.25.1" + +[tool.poetry.group.pre-commit.dependencies] +coverage = {extras = ["toml"], version = "^7.6.1"} +safety = "^3.2.9" +pre-commit = "^4.0.1" +black = "^24.8.0" +flake8 = "^7.1.1" +flake8-bandit = "^4.1.1" +flake8-bugbear = "^24.10.31" +flake8-docstrings = "^1.6.0" +flake8-rst-docstrings = "^0.3.0" +flake8-pyproject = "^1.2.3" +isort = "^5.8" +pep8-naming = "*" +darglint = "^1.8.1" +reorder-python-imports = "^3.8.2" +pre-commit-hooks = "^5.0.0" +pre-commit-commit-msg-hooks = "^0.1.0" + [tool.commitizen] name = "cz_conventional_commits" version = "0.8.0" @@ -87,6 +104,14 @@ exclude = ''' ) ''' +[tool.flake8] +ignore = ["E501", "W503", "E731"] +per-file-ignores = [ + '__init__.py:F401', +] +max-line-length = 120 +count = true + [tool.isort] profile = "black" multi_line_output = 3 @@ -94,6 +119,11 @@ line_length = 88 [tool.pytest.ini_options] markers = ["plots", "docker"] +addopts = """ +--ignore=tests/rr/test_fnm.py +--deselect=tests/test_model.py::test_dimr_mode_save +--deselect=tests/test_model.py::test_dimr_model +""" [build-system] requires = ["poetry-core>=1.0.0"] diff --git a/tests/conftest.py b/tests/conftest.py new file mode 100644 index 000000000..e82050c9f --- /dev/null +++ b/tests/conftest.py @@ -0,0 +1,154 @@ +from pathlib import Path +from typing import Dict, List + +import pytest + + +@pytest.fixture +def initial_condition_quantities() -> List[str]: + return [ + "bedlevel", + "bedlevel1D", + "bedlevel2D", + "initialwaterlevel", + "initialwaterlevel1d", + "initialwaterlevel2d", + "initialsalinity", + "initialsalinitytop", + "initialsalinitybot", + "initialverticalsalinityprofile", + "initialtemperature", + "initialverticaltemperatureprofile", + "initialunsaturatedzonethickness", + "initialvelocityx", + "initialvelocityy", + "initialvelocity", + "initialwaqbot", + ] + + +@pytest.fixture +def initial_condition_interpolation_methods() -> List[str]: + return [ + "constant", + "averaging", + "triangulation", + "Possible values: constant, triangulation, averaging.", + ] + + +@pytest.fixture +def initial_condition_file_type() -> List[str]: + return [ + "arcinfo", + "GeoTIFF", + "sample", + "1dField", + "polygon", + "Possible values: arcinfo, GeoTIFF, sample, 1dField, polygon.", + ] + + +@pytest.fixture +def meteo_forcing_file_type() -> List[str]: + return [ + "bcAscii", + "uniform", + "uniMagDir", + "meteoGridEqui", + "spiderweb", + "meteoGridCurvi", + "netcdf", + "Possible values: bcAscii, uniform, uniMagDir, meteoGridEqui, spiderweb, meteoGridCurvi, netcdf.", + ] + + +@pytest.fixture +def meteo_interpolation_methods() -> List[str]: + return [ + "nearestNb", + "linearSpaceTime", + "Possible values: nearestNb, linearSpaceTime.", + ] + + +@pytest.fixture +def initial_cond_averaging_type() -> List[str]: + return [ + "mean", + "nearestNb", + "max", + "min", + "invDist", + "minAbs", + "median", + "Possible values: mean, nearestNb, max, min, invDist, minAbs.", + ] + + +@pytest.fixture +def input_files_dir() -> Path: + return Path("tests/data/input") + + +@pytest.fixture +def output_files_dir() -> Path: + return Path("tests/data/output") + + +@pytest.fixture +def reference_files_dir() -> Path: + return Path("tests/data/reference") + + +@pytest.fixture +def time_series_file(input_files_dir: Path) -> Path: + return input_files_dir.joinpath("tim/single_data_for_timeseries.tim") + + +@pytest.fixture +def boundary_condition_file(input_files_dir: Path) -> Path: + return input_files_dir.joinpath( + "dflowfm_individual_files/FlowFM_boundaryconditions2d_and_vectors.bc" + ) + + +@pytest.fixture +def old_forcing_file() -> Path: + return Path("tests/data/input/old-external-forcing.ext") + + +@pytest.fixture(scope="function") +def old_forcing_file_initial_condition() -> Dict[str, Path]: + return { + "path": Path( + "tests/data/input/old-external-forcing-initial-contitions-only.ext" + ), + "quantities": ["initialwaterlevel", "initialwaterlevel", "initialsalinity"], + "file_type": ["polygon", "sample", "sample"], + "file_path": ["iniwaterlevel1.pol", "iniwaterlevel.xyz", "inisalinity.xyz"], + } + + +@pytest.fixture +def old_forcing_file_quantities() -> List[str]: + return [ + "windx", + "windy", + "initialwaterlevel", + "initialwaterlevel", + "initialsalinity", + "bedlevel", + "bedlevel", + "waterlevelbnd", + "horizontaleddyviscositycoefficient", + "horizontaleddyviscositycoefficient", + "horizontaleddyviscositycoefficient", + "horizontaleddyviscositycoefficient", + "salinitybnd", + ] + + +@pytest.fixture +def old_forcing_comment_len() -> int: + return 63 diff --git a/tests/data/input/old-external-forcing-initial-contitions-only.ext b/tests/data/input/old-external-forcing-initial-contitions-only.ext new file mode 100644 index 000000000..360728aae --- /dev/null +++ b/tests/data/input/old-external-forcing-initial-contitions-only.ext @@ -0,0 +1,83 @@ +* QUANTITY : waterlevelbnd, velocitybnd, dischargebnd, tangentialvelocitybnd, normalvelocitybnd filetype=9 method=2,3 +* : outflowbnd, neumannbnd, qhbnd filetype=9 method=2,3 +* : salinitybnd filetype=9 method=2,3 +* : gateloweredgelevel, damlevel, pump filetype=9 method=2,3 +* : frictioncoefficient, horizontaleddyviscositycoefficient, advectiontype, ibotlevtype filetype=4,7,10 method=4 +* : initialwaterlevel filetype=4,7,10,12 method=4,5 +* : initialtemperature filetype=4,7,10,12 method=4,5 +* : initialsalinity, initialsalinitytop: use initialsalinity for depth-uniform, or +* : as bed level value in combination with initialsalinitytop filetype=4,7,10 method=4 +* : initialverticaltemperatureprofile filetype=9,10 method= +* : initialverticalsalinityprofile filetype=9,10 method= +* : windx, windy, windxy, rainfall_mmperday, atmosphericpressure filetype=1,2,4,7,8 method=1,2,3 +* : shiptxy, movingstationtxy filetype=1 method=1 +* : discharge_salinity_temperature_sorsin filetype=9 method=1 +* +* kx = Vectormax = Nr of variables specified on the same time/space frame. Eg. Wind magnitude,direction: kx = 2 +* FILETYPE=1 : uniform kx = 1 value 1 dim array uni +* FILETYPE=2 : unimagdir kx = 2 values 1 dim array, uni mag/dir transf to u,v, in index 1,2 +* FILETYPE=3 : svwp kx = 3 fields u,v,p 3 dim array nointerpolation +* FILETYPE=4 : arcinfo kx = 1 field 2 dim array bilin/direct +* FILETYPE=5 : spiderweb kx = 3 fields 3 dim array bilin/spw +* FILETYPE=6 : curvi kx = ? bilin/findnm +* FILETYPE=7 : triangulation kx = 1 field 1 dim array triangulation +* FILETYPE=8 : triangulation_magdir kx = 2 fields consisting of Filetype=2 triangulation in (wind) stations +* +* FILETYPE=9 : polyline kx = 1 For polyline points i= 1 through N specify boundary signals, either as +* timeseries or Fourier components or tidal constituents +* Timeseries are in files *_000i.tim, two columns: time (min) values +* Fourier components and or tidal constituents are in files *_000i.cmp, three columns +* period (min) or constituent name (e.g. M2), amplitude and phase (deg) +* If no file is specified for a node, its value will be interpolated from surrounding nodes +* If only one signal file is specified, the boundary gets a uniform signal +* For a dischargebnd, only one signal file must be specified +* +* FILETYPE=10 : inside_polygon kx = 1 field uniform value inside polygon for INITIAL fields +* FILETYPE=11 : ncgrid currently not in use +* FILETYPE=12 : ncflow kx = 1 field 1 dim array triangulation +* +* METHOD =0 : provider just updates, another provider that pointers to this one does the actual interpolation +* =1 : intp space and time (getval) keep 2 meteofields in memory +* =2 : first intp space (update), next intp. time (getval) keep 2 flowfields in memory +* =3 : save weightfactors, intp space and time (getval), keep 2 pointer- and weight sets in memory. +* =4 : only spatial, inside polygon +* =5 : only spatial, triangulation +* =6 : only spatial, averaging +* =7 : only spatial, index triangulation +* =8 : only spatial, smoothing +* =9 : only spatial, internal diffusion +* =10 : only initial vertical profiles +* +* OPERAND =O : Override at all points +* =+ : Add to previously specified value +* =* : Multiply with previously specified value +* =A : Apply only if no value specified previously (For Initial fields, similar to Quickin preserving best data specified first) +* =X : MAX with prev. spec. +* =N : MIN with prev. spec. +* +* VALUE = : Offset value for this provider +* +* FACTOR = : Conversion factor for this provider +* +************************************************************************************************************** + + +* First 1D2D: +QUANTITY =initialwaterlevel +FILENAME =iniwaterlevel1.pol +FILETYPE =10 +METHOD =4 +OPERAND =O +VALUE =1.0 + +QUANTITY =initialwaterlevel +FILENAME =iniwaterlevel.xyz +FILETYPE =7 +METHOD =5 +OPERAND =O + +QUANTITY =initialsalinity +FILENAME =inisalinity.xyz +FILETYPE =7 +METHOD =5 +OPERAND =O diff --git a/tests/data/input/old-external-forcing.ext b/tests/data/input/old-external-forcing.ext new file mode 100644 index 000000000..c0fc8ffee --- /dev/null +++ b/tests/data/input/old-external-forcing.ext @@ -0,0 +1,147 @@ +* QUANTITY : waterlevelbnd, velocitybnd, dischargebnd, tangentialvelocitybnd, normalvelocitybnd filetype=9 method=2,3 +* : outflowbnd, neumannbnd, qhbnd filetype=9 method=2,3 +* : salinitybnd filetype=9 method=2,3 +* : gateloweredgelevel, damlevel, pump filetype=9 method=2,3 +* : frictioncoefficient, horizontaleddyviscositycoefficient, advectiontype, ibotlevtype filetype=4,7,10 method=4 +* : initialwaterlevel filetype=4,7,10,12 method=4,5 +* : initialtemperature filetype=4,7,10,12 method=4,5 +* : initialsalinity, initialsalinitytop: use initialsalinity for depth-uniform, or +* : as bed level value in combination with initialsalinitytop filetype=4,7,10 method=4 +* : initialverticaltemperatureprofile filetype=9,10 method= +* : initialverticalsalinityprofile filetype=9,10 method= +* : windx, windy, windxy, rainfall_mmperday, atmosphericpressure filetype=1,2,4,7,8 method=1,2,3 +* : shiptxy, movingstationtxy filetype=1 method=1 +* : discharge_salinity_temperature_sorsin filetype=9 method=1 +* +* kx = Vectormax = Nr of variables specified on the same time/space frame. Eg. Wind magnitude,direction: kx = 2 +* FILETYPE=1 : uniform kx = 1 value 1 dim array uni +* FILETYPE=2 : unimagdir kx = 2 values 1 dim array, uni mag/dir transf to u,v, in index 1,2 +* FILETYPE=3 : svwp kx = 3 fields u,v,p 3 dim array nointerpolation +* FILETYPE=4 : arcinfo kx = 1 field 2 dim array bilin/direct +* FILETYPE=5 : spiderweb kx = 3 fields 3 dim array bilin/spw +* FILETYPE=6 : curvi kx = ? bilin/findnm +* FILETYPE=7 : triangulation kx = 1 field 1 dim array triangulation +* FILETYPE=8 : triangulation_magdir kx = 2 fields consisting of Filetype=2 triangulation in (wind) stations +* +* FILETYPE=9 : polyline kx = 1 For polyline points i= 1 through N specify boundary signals, either as +* timeseries or Fourier components or tidal constituents +* Timeseries are in files *_000i.tim, two columns: time (min) values +* Fourier components and or tidal constituents are in files *_000i.cmp, three columns +* period (min) or constituent name (e.g. M2), amplitude and phase (deg) +* If no file is specified for a node, its value will be interpolated from surrounding nodes +* If only one signal file is specified, the boundary gets a uniform signal +* For a dischargebnd, only one signal file must be specified +* +* FILETYPE=10 : inside_polygon kx = 1 field uniform value inside polygon for INITIAL fields +* FILETYPE=11 : ncgrid currently not in use +* FILETYPE=12 : ncflow kx = 1 field 1 dim array triangulation +* +* METHOD =0 : provider just updates, another provider that pointers to this one does the actual interpolation +* =1 : intp space and time (getval) keep 2 meteofields in memory +* =2 : first intp space (update), next intp. time (getval) keep 2 flowfields in memory +* =3 : save weightfactors, intp space and time (getval), keep 2 pointer- and weight sets in memory. +* =4 : only spatial, inside polygon +* =5 : only spatial, triangulation +* =6 : only spatial, averaging +* =7 : only spatial, index triangulation +* =8 : only spatial, smoothing +* =9 : only spatial, internal diffusion +* =10 : only initial vertical profiles +* +* OPERAND =O : Override at all points +* =+ : Add to previously specified value +* =* : Multiply with previously specified value +* =A : Apply only if no value specified previously (For Initial fields, similar to Quickin preserving best data specified first) +* =X : MAX with prev. spec. +* =N : MIN with prev. spec. +* +* VALUE = : Offset value for this provider +* +* FACTOR = : Conversion factor for this provider +* +************************************************************************************************************** + +QUANTITY=windx +FILENAME=windtest.amu +FILETYPE=4 +METHOD=2 +OPERAND=O + +QUANTITY=windy +FILENAME=windtest.amv +FILETYPE=4 +METHOD=2 +OPERAND=O + +* First 1D2D: +QUANTITY =initialwaterlevel +FILENAME =iniwaterlevel1.pol +FILETYPE =10 +METHOD =4 +OPERAND =O +VALUE =1.0 + +QUANTITY =initialwaterlevel +FILENAME =iniwaterlevel.xyz +FILETYPE =7 +METHOD =5 +OPERAND =O + +QUANTITY =initialsalinity +FILENAME =inisalinity.xyz +FILETYPE =7 +METHOD =5 +OPERAND =O + +QUANTITY=bedlevel +FILENAME=bathy.xyz +FILETYPE=7 +METHOD=6 +OPERAND=O +NUMMIN=4 + +QUANTITY=bedlevel +FILENAME=bathy.xyz +FILETYPE=7 +METHOD=6 +OPERAND=O + + +QUANTITY =waterlevelbnd +FILENAME =right.pli +FILETYPE =9 +METHOD =3 +OPERAND =O + +QUANTITY =horizontaleddyviscositycoefficient +FILENAME =eddvishor.xyz +FILETYPE =7 +METHOD =5 +OPERAND =O + +QUANTITY =horizontaleddyviscositycoefficient +FILENAME =eddvishor.xyz +FILETYPE =7 +METHOD =5 +OPERAND =O + +QUANTITY =horizontaleddyviscositycoefficient +FILENAME =eddvishor1.pol +FILETYPE =10 +METHOD =4 +OPERAND =O +VALUE =7.0 + +QUANTITY =horizontaleddyviscositycoefficient +FILENAME =eddvishor2.pol +FILETYPE =10 +METHOD =4 +OPERAND =O +VALUE =6.0 + + +QUANTITY =salinitybnd +FILENAME =rightsal.pli +FILETYPE =9 +METHOD =3 +OPERAND =O diff --git a/tests/dflowfm/test_ext.py b/tests/dflowfm/test_ext.py index 9ce8eb8ba..093072dfd 100644 --- a/tests/dflowfm/test_ext.py +++ b/tests/dflowfm/test_ext.py @@ -1,6 +1,7 @@ from pathlib import Path from typing import Dict, List, Optional +import numpy as np import pytest from pydantic.v1 import ValidationError @@ -12,11 +13,11 @@ Lateral, Meteo, MeteoForcingFileType, + MeteoInterpolationMethod, ) from hydrolib.core.dflowfm.ini.models import INIBasedModel from hydrolib.core.dflowfm.tim.models import TimModel - -from ..utils import test_data_dir, test_input_dir +from tests.utils import test_data_dir class TestModels: @@ -426,7 +427,7 @@ def test_dischargeforcings_fromfile(self): m = ExtModel(filepath) assert len(m.lateral) == 72 assert m.lateral[0].discharge == RealTime.realtime - assert m.lateral[1].discharge == 1.23 + assert np.isclose(m.lateral[1].discharge, 1.23) assert isinstance(m.lateral[3].discharge, ForcingModel) assert isinstance(m.lateral[3].discharge.forcing[0], Constant) assert m.lateral[3].discharge.forcing[0].name == "10637" @@ -594,113 +595,201 @@ def test_given_dict_values_doesnot_raise(self, dict_values: dict): == expected_locationfile ) - class TestMeteo: - """Class to test all methods contained in the - hydrolib.core.dflowfm.ext.models.Meteo class""" - def _create_meteo_dict(self) -> Dict: - dict_values = { - "quantity": "rainfall", - "forcingfile": ForcingModel(), - "forcingfiletype": MeteoForcingFileType.bcascii, - "targetmaskfile": None, - "targetmaskinvert": False, - "interpolationmethod": None, - } - return dict_values - - @pytest.mark.parametrize( - ("missing_field", "alias_field"), - [ - ("quantity", "quantity"), - ("forcingfile", "forcingFile"), - ("forcingfiletype", "forcingFileType"), - ], +class TestExtModel: + """Class to test all methods contained in the + hydrolib.core.dflowfm.ext.models.ExtModel class""" + + def test_construct_from_file_with_tim(self, input_files_dir: Path): + input_ext = input_files_dir.joinpath( + "e02/f006_external_forcing/c063_rain_tim/rainschematic.ext" ) - def test_missing_required_fields(self, missing_field, alias_field): - dict_values = self._create_meteo_dict() - del dict_values[missing_field] - with pytest.raises(ValidationError) as error: - Meteo(**dict_values) + ext_model = ExtModel(input_ext) - expected_message = f"{alias_field}\n field required " - assert expected_message in str(error.value) + assert isinstance(ext_model, ExtModel) + assert len(ext_model.meteo) == 1 + assert ext_model.meteo[0].quantity == "rainfall_rate" + assert isinstance(ext_model.meteo[0].forcingfile, TimModel) + assert ext_model.meteo[0].forcingfiletype == MeteoForcingFileType.uniform - def test_initialize_forcingfile_with_timfile_initializes_timmodel(self): - forcingfile = test_input_dir / "tim" / "single_data_for_timeseries.tim" - values = self._create_meteo_dict() - values["forcingfile"] = forcingfile + assert len(ext_model.meteo[0].forcingfile.timeseries) == 14 - meteo = Meteo(**values) + def test_construct_from_file_with_bc(self, input_files_dir: Path): + input_ext = input_files_dir.joinpath( + "e02/f006_external_forcing/c069_rain_bc/rainschematic.ext" + ) + ext_model = ExtModel(input_ext) - assert isinstance(meteo.forcingfile, TimModel) + assert isinstance(ext_model, ExtModel) + assert len(ext_model.meteo) == 1 + assert ext_model.meteo[0].quantity == "rainfall_rate" + assert isinstance(ext_model.meteo[0].forcingfile, ForcingModel) + assert ext_model.meteo[0].forcingfiletype == MeteoForcingFileType.bcascii - def test_initialize_forcingfile_with_bcfile_initializes_forcingmodel(self): - forcingfile = ( - test_input_dir - / "dflowfm_individual_files" - / "FlowFM_boundaryconditions2d_and_vectors.bc" - ) - values = self._create_meteo_dict() - values["forcingfile"] = forcingfile - - meteo = Meteo(**values) + def test_construct_from_file_with_netcdf(self, input_files_dir: Path): + input_ext = input_files_dir.joinpath( + "e02/f006_external_forcing/c067_rain_netcdf_stations/rainschematic.ext" + ) + ext_model = ExtModel(input_ext) - assert isinstance(meteo.forcingfile, ForcingModel) + assert isinstance(ext_model, ExtModel) + assert len(ext_model.meteo) == 1 + assert ext_model.meteo[0].quantity == "rainfall" + assert isinstance(ext_model.meteo[0].forcingfile, DiskOnlyFileModel) + assert ext_model.meteo[0].forcingfiletype == MeteoForcingFileType.netcdf - def test_construct_from_file_with_tim(self): - input_ext = ( - test_input_dir - / "e02/f006_external_forcing/c063_rain_tim/rainschematic.ext" - ) + def test_ext_model_correct_default_serializer_config(self): + model = ExtModel() - ext_model = ExtModel(input_ext) + assert model.serializer_config.section_indent == 0 + assert model.serializer_config.property_indent == 0 + assert model.serializer_config.datablock_indent == 8 + assert model.serializer_config.float_format == "" + assert model.serializer_config.datablock_spacing == 2 + assert model.serializer_config.comment_delimiter == "#" + assert model.serializer_config.skip_empty_properties == True - assert isinstance(ext_model, ExtModel) - assert len(ext_model.meteo) == 1 - assert ext_model.meteo[0].quantity == "rainfall_rate" - assert isinstance(ext_model.meteo[0].forcingfile, TimModel) - assert ext_model.meteo[0].forcingfiletype == MeteoForcingFileType.uniform - assert len(ext_model.meteo[0].forcingfile.timeseries) == 14 +class TestMeteo: - def test_construct_from_file_with_bc(self): - input_ext = ( - test_input_dir - / "e02/f006_external_forcing/c069_rain_bc/rainschematic.ext" - ) + def test_meteo_interpolation_methods(self, meteo_interpolation_methods: List[str]): + assert len(MeteoInterpolationMethod) == 3 + assert all( + quantity.value in meteo_interpolation_methods + for quantity in MeteoInterpolationMethod.__members__.values() + ) - ext_model = ExtModel(input_ext) + def test_meteo_forcing_file_type(self, meteo_forcing_file_type: List[str]): + assert len(MeteoForcingFileType) == 8 + assert all( + quantity.value in meteo_forcing_file_type + for quantity in MeteoForcingFileType.__members__.values() + ) - assert isinstance(ext_model, ExtModel) - assert len(ext_model.meteo) == 1 - assert ext_model.meteo[0].quantity == "rainfall_rate" - assert isinstance(ext_model.meteo[0].forcingfile, ForcingModel) - assert ext_model.meteo[0].forcingfiletype == MeteoForcingFileType.bcascii + def test_meteo_initialization(self): + data = { + "quantity": "rainfall", + "forcingfile": ForcingModel(), + "forcingfiletype": MeteoForcingFileType.bcascii, + "targetmaskfile": None, + "targetmaskinvert": False, + "interpolationmethod": None, + } + meteo = Meteo(**data) + assert meteo.quantity == "rainfall" + assert isinstance(meteo.forcingfile, ForcingModel) + assert meteo.forcingfiletype == MeteoForcingFileType.bcascii + + def test_default_values(self): + meteo = Meteo( + quantity="rainfall", + forcingfile=ForcingModel(), + forcingfiletype=MeteoForcingFileType.uniform, + ) + assert meteo.targetmaskfile is None + assert meteo.targetmaskinvert is None + assert meteo.interpolationmethod is None + assert meteo.operand == "O" + assert meteo.extrapolationAllowed is None + assert meteo.extrapolationSearchRadius is None + assert meteo.averagingType is None + assert meteo.averagingNumMin is None + assert meteo.averagingPercentile is None + + def test_setting_optional_fields(self): + meteo = Meteo( + quantity="rainfall", + forcingfile=ForcingModel(), + forcingfiletype=MeteoForcingFileType.uniform, + targetmaskfile=None, + targetmaskinvert=True, + interpolationmethod=MeteoInterpolationMethod.nearestnb, + operand="O", + extrapolationAllowed=True, + extrapolationSearchRadius=10, + averagingType=1, + averagingNumMin=0.5, + averagingPercentile=90, + ) + assert meteo.targetmaskfile is None + assert meteo.targetmaskinvert is True + assert meteo.interpolationmethod == MeteoInterpolationMethod.nearestnb + assert meteo.operand == "O" + assert meteo.extrapolationAllowed is True + assert meteo.extrapolationSearchRadius == 10 + assert meteo.averagingType == 1 + assert np.isclose(meteo.averagingNumMin, 0.5) + assert meteo.averagingPercentile == 90 + + def test_invalid_forcingfiletype(self): + with pytest.raises(ValueError): + Meteo( + quantity="rainfall", + forcingfile=ForcingModel(), + forcingfiletype="invalidType", + ) - def test_construct_from_file_with_netcdf(self): - input_ext = ( - test_input_dir - / "e02/f006_external_forcing/c067_rain_netcdf_stations/rainschematic.ext" + def test_invalid_interpolation_method(self): + with pytest.raises(ValueError): + Meteo( + quantity="rainfall", + forcingfile=ForcingModel(), + forcingfiletype=MeteoForcingFileType.uniform, + interpolationmethod="invalidMethod", ) - ext_model = ExtModel(input_ext) - - assert isinstance(ext_model, ExtModel) - assert len(ext_model.meteo) == 1 - assert ext_model.meteo[0].quantity == "rainfall" - assert isinstance(ext_model.meteo[0].forcingfile, DiskOnlyFileModel) - assert ext_model.meteo[0].forcingfiletype == MeteoForcingFileType.netcdf - - class TestExtModel: - def test_ext_model_correct_default_serializer_config(self): - model = ExtModel() - - assert model.serializer_config.section_indent == 0 - assert model.serializer_config.property_indent == 0 - assert model.serializer_config.datablock_indent == 8 - assert model.serializer_config.float_format == "" - assert model.serializer_config.datablock_spacing == 2 - assert model.serializer_config.comment_delimiter == "#" - assert model.serializer_config.skip_empty_properties == True + @pytest.mark.parametrize( + ("missing_field", "alias_field"), + [ + ("quantity", "quantity"), + ("forcingfile", "forcingFile"), + ("forcingfiletype", "forcingFileType"), + ], + ) + def test_missing_required_fields(self, missing_field, alias_field): + dict_values = { + "quantity": "rainfall", + "forcingfile": ForcingModel(), + "forcingfiletype": MeteoForcingFileType.bcascii, + "targetmaskfile": None, + "targetmaskinvert": False, + "interpolationmethod": None, + } + del dict_values[missing_field] + + with pytest.raises(ValidationError) as error: + Meteo(**dict_values) + + expected_message = f"{alias_field}\n field required " + assert expected_message in str(error.value) + + def test_is_intermediate_link(self): + meteo = Meteo( + quantity="rainfall", + forcingfile=ForcingModel(), + forcingfiletype=MeteoForcingFileType.uniform, + ) + assert meteo.is_intermediate_link() is True + + def test_initialize_with_boundary_condition_file( + self, boundary_condition_file: Path + ): + meteo = Meteo( + quantity="rainfall", + forcingfile=boundary_condition_file, + forcingfiletype=MeteoForcingFileType.bcascii, + ) + assert isinstance(meteo.forcingfile, ForcingModel) + assert meteo.forcingfile.filepath == boundary_condition_file + assert meteo.forcingfiletype == MeteoForcingFileType.bcascii + + def test_initialize_with_time_series_file(self, time_series_file: Path): + meteo = Meteo( + quantity="rainfall", + forcingfile=time_series_file, + forcingfiletype=MeteoForcingFileType.bcascii, + ) + assert isinstance(meteo.forcingfile, TimModel) + assert meteo.forcingfile.filepath == time_series_file + assert meteo.forcingfiletype == MeteoForcingFileType.bcascii diff --git a/tests/dflowfm/test_extold.py b/tests/dflowfm/test_extold.py index 473ca7de4..2fedccf78 100644 --- a/tests/dflowfm/test_extold.py +++ b/tests/dflowfm/test_extold.py @@ -1,4 +1,6 @@ +import copy from pathlib import Path +from typing import List import pytest @@ -10,9 +12,11 @@ from hydrolib.core.dflowfm.common.models import Operand from hydrolib.core.dflowfm.extold.models import ( HEADER, + INITIAL_CONDITION_QUANTITIES_VALID_PREFIXES, ExtOldExtrapolationMethod, ExtOldFileType, ExtOldForcing, + ExtOldInitialConditionQuantity, ExtOldMethod, ExtOldModel, ExtOldQuantity, @@ -22,14 +26,12 @@ from hydrolib.core.dflowfm.extold.serializer import Serializer from hydrolib.core.dflowfm.polyfile.models import PolyFile from hydrolib.core.dflowfm.tim.models import TimModel +from tests.utils import assert_files_equal, create_temp_file_from_lines, get_temp_file -from ..utils import ( - assert_files_equal, - create_temp_file_from_lines, - get_temp_file, - test_input_dir, -) - +quantities_with_prefixes = copy.deepcopy(INITIAL_CONDITION_QUANTITIES_VALID_PREFIXES) +quantities_with_prefixes = [ + f"{quantity}-suffix" for quantity in quantities_with_prefixes +] EXP_HEADER = """ QUANTITY : waterlevelbnd, velocitybnd, dischargebnd, tangentialvelocitybnd, normalvelocitybnd filetype=9 method=2,3 : outflowbnd, neumannbnd, qhbnd, uxuyadvectionvelocitybnd filetype=9 method=2,3 @@ -126,10 +128,25 @@ class TestExtForcing: - def test_initialize_with_timfile_initializes_timmodel(self): + def test_initialize_with_old_external_forcing_file( + self, + old_forcing_file: Path, + old_forcing_file_quantities: List[str], + old_forcing_comment_len: int, + ): + model = ExtOldModel(old_forcing_file) + assert isinstance(model, ExtOldModel) + assert len(model.comment) == old_forcing_comment_len + assert len(model.forcing) == len(old_forcing_file_quantities) + forcing_1 = model.forcing[0] + assert isinstance(forcing_1, ExtOldForcing) + quantities = [forcing.quantity for forcing in model.forcing] + assert all([quantity in old_forcing_file_quantities for quantity in quantities]) + + def test_initialize_with_timfile_initializes_timmodel(self, input_files_dir: Path): forcing = ExtOldForcing( quantity=ExtOldQuantity.WaterLevelBnd, - filename=test_input_dir / "tim" / "triple_data_for_timeseries.tim", + filename=input_files_dir.joinpath("tim/triple_data_for_timeseries.tim"), filetype=ExtOldFileType.TimeSeries, method=ExtOldMethod.InterpolateTimeAndSpaceSaveWeights, operand=Operand.override, @@ -137,10 +154,10 @@ def test_initialize_with_timfile_initializes_timmodel(self): assert isinstance(forcing.filename, TimModel) - def test_initialize_with_polyfile_initializes_polyfile(self): + def test_initialize_with_polyfile_initializes_polyfile(self, input_files_dir: Path): forcing = ExtOldForcing( quantity=ExtOldQuantity.WaterLevelBnd, - filename=test_input_dir / "dflowfm_individual_files" / "test.pli", + filename=input_files_dir.joinpath("dflowfm_individual_files/test.pli"), filetype=ExtOldFileType.Polyline, method=ExtOldMethod.InterpolateTimeAndSpaceSaveWeights, operand=Operand.override, @@ -148,10 +165,12 @@ def test_initialize_with_polyfile_initializes_polyfile(self): assert isinstance(forcing.filename, PolyFile) - def test_initialize_with_unrecognized_file_initializes_diskonlyfilemodel(self): + def test_initialize_with_unrecognized_file_initializes_diskonlyfilemodel( + self, input_files_dir: Path + ): forcing = ExtOldForcing( quantity=ExtOldQuantity.WaterLevelBnd, - filename=Path(test_input_dir / "file_load_test" / "FlowFM_net.nc"), + filename=input_files_dir.joinpath("file_load_test/FlowFM_net.nc"), filetype=ExtOldFileType.NetCDFGridData, method=ExtOldMethod.InterpolateTimeAndSpaceSaveWeights, operand=Operand.override, @@ -1001,3 +1020,31 @@ def test_serialize(self): exp_file_content, "test_serialize_expected.ext" ) as exp_file: assert_files_equal(file, exp_file) + + +class TestOldInitialConditionQuantity: + + def test_ext_old_initial_condition_quantity(self, initial_condition_quantities): + """ + Test the number of initial condition quantities in the ExtOldInitialConditionQuantity enum. + """ + assert len(ExtOldInitialConditionQuantity) == len(initial_condition_quantities) + assert all( + quantity.value in initial_condition_quantities + for quantity in ExtOldInitialConditionQuantity.__members__.values() + ) + + def test_the_missing_method(self): + """ + Test the missing method in the ExtOldInitialConditionQuantity enum with a ValueError. + """ + with pytest.raises(ValueError): + ExtOldInitialConditionQuantity("missing_method") + + @pytest.mark.parametrize("qunatity_name", quantities_with_prefixes) + def test_the_missing_method_with_tracers(self, qunatity_name): + """ + Test the missing method in the ExtOldInitialConditionQuantity enum with a quantity that starts the quantities in the . + """ + quantity = ExtOldInitialConditionQuantity(qunatity_name) + assert quantity.value == qunatity_name diff --git a/tests/dflowfm/test_inifield.py b/tests/dflowfm/test_inifield.py index f3ea8abd3..e7e4ae017 100644 --- a/tests/dflowfm/test_inifield.py +++ b/tests/dflowfm/test_inifield.py @@ -1,12 +1,16 @@ import inspect from pathlib import Path +from typing import List +import numpy as np import pytest from pydantic.v1.error_wrappers import ValidationError +from hydrolib.core.basemodel import DiskOnlyFileModel from hydrolib.core.dflowfm.common.models import Operand from hydrolib.core.dflowfm.ini.parser import Parser, ParserConfig from hydrolib.core.dflowfm.inifield.models import ( + AveragingType, DataFileType, IniFieldModel, InitialField, @@ -14,11 +18,9 @@ LocationType, ParameterField, ) - -from ..utils import ( +from tests.utils import ( WrapperTest, assert_files_equal, - test_data_dir, test_output_dir, test_reference_dir, ) @@ -92,8 +94,10 @@ def test_initialfield_parses_flowdirection_case_insensitive( assert getattr(inifield, attribute.lower()) == expected - def test_inifield_model(self): - filepath = test_data_dir / "input/dflowfm_individual_files/initialFields.ini" + def test_inifield_model(self, input_files_dir: Path): + filepath = input_files_dir.joinpath( + "dflowfm_individual_files/initialFields.ini" + ) m = IniFieldModel(filepath) assert len(m.initial) == 2 @@ -124,11 +128,13 @@ def test_inifield_model(self): assert m.parameter[1].value == 0.03 assert m.parameter[1].operand == Operand.mult - def test_load_and_save(self): + def test_load_and_save(self, input_files_dir: Path): """Test whether a model loaded from file is serialized correctly. Particularly intended to test writing of default enum values.""" - filepath = test_data_dir / "input/dflowfm_individual_files/initialFields.ini" + filepath = input_files_dir.joinpath( + "dflowfm_individual_files/initialFields.ini" + ) m = IniFieldModel(filepath) output_file = Path(test_output_dir / "fm" / "serialize_initialFields.ini") @@ -192,3 +198,124 @@ def test_initialfield_value_with_missing_value(self): ) assert expected_message in str(error.value) + + +def test_initial_conditions_interpolation_methods( + initial_condition_interpolation_methods: List[str], +): + assert len(InterpolationMethod) == 4 + assert all( + quantity.value in initial_condition_interpolation_methods + for quantity in InterpolationMethod.__members__.values() + ) + + +def test_initial_condition_file_type(initial_condition_file_type: List[str]): + assert len(DataFileType) == 6 + assert all( + quantity.value in initial_condition_file_type + for quantity in DataFileType.__members__.values() + ) + + +def test_averaging_type_file_type(initial_cond_averaging_type: List[str]): + assert len(AveragingType) == 7 + assert all( + quantity.value in initial_cond_averaging_type + for quantity in AveragingType.__members__.values() + ) + + +class TestInitialConditions: + + def test_initialization(self): + data = { + "quantity": "waterlevel", + "datafile": Path("anyfile.pli"), + "datafiletype": DataFileType.arcinfo, + "interpolationmethod": InterpolationMethod.constant, + "operand": "O", + "averagingtype": AveragingType.mean, + "averagingnummin": 2, + "averagingpercentile": 95.0, + } + initial_conditions = InitialField(**data) + assert initial_conditions.quantity == "waterlevel" + assert isinstance(initial_conditions.datafile, DiskOnlyFileModel) + assert initial_conditions.datafiletype == DataFileType.arcinfo + assert initial_conditions.interpolationmethod == InterpolationMethod.constant + assert initial_conditions.operand == "O" + assert initial_conditions.averagingtype == AveragingType.mean + assert initial_conditions.averagingnummin == 2 + assert np.isclose(initial_conditions.averagingpercentile, 95.0) + + def test_default_values(self): + initial_conditions = InitialField( + quantity="waterlevel", + datafile=DiskOnlyFileModel(), + datafiletype=DataFileType.arcinfo, + ) + assert initial_conditions.interpolationmethod is None + assert initial_conditions.operand == "O" + assert initial_conditions.averagingtype is "mean" + assert np.isclose(initial_conditions.averagingrelsize, 1.01) + assert initial_conditions.averagingnummin == 1 + assert initial_conditions.extrapolationmethod is False + assert initial_conditions.locationtype is "all" + assert np.isclose(initial_conditions.averagingpercentile, 0.0) + + def test_setting_optional_fields(self): + initial_conditions = InitialField( + quantity="waterlevel", + datafile=DiskOnlyFileModel(), + datafiletype=DataFileType.arcinfo, + interpolationmethod=InterpolationMethod.constant, + operand="O", + averagingtype=AveragingType.mean, + averagingnummin=2, + averagingpercentile=95.0, + ) + assert initial_conditions.interpolationmethod == InterpolationMethod.constant + assert initial_conditions.operand == "O" + assert initial_conditions.averagingtype == AveragingType.mean + assert initial_conditions.averagingnummin == 2 + assert np.isclose(initial_conditions.averagingpercentile, 95.0) + + def test_invalid_datafiletype(self): + with pytest.raises(ValueError): + InitialField( + quantity="waterlevel", + datafile=DiskOnlyFileModel(), + datafiletype="invalidType", + ) + + def test_invalid_interpolationmethod(self): + with pytest.raises(ValueError): + InitialField( + quantity="waterlevel", + datafile=DiskOnlyFileModel(), + datafiletype=DataFileType.arcinfo, + interpolationmethod="invalidMethod", + ) + + @pytest.mark.parametrize( + ("missing_field", "alias_field"), + [ + ("quantity", "quantity"), + ("datafile", "dataFile"), + ("datafiletype", "dataFileType"), + ], + ) + def test_missing_required_fields(self, missing_field, alias_field): + dict_values = { + "quantity": "rainfall", + "datafile": DiskOnlyFileModel(), + "datafiletype": DataFileType.arcinfo, + } + del dict_values[missing_field] + + with pytest.raises(ValidationError) as error: + InitialField(**dict_values) + + expected_message = f"{alias_field}\n field required " + assert expected_message in str(error.value) diff --git a/tests/dflowfm/test_net.py b/tests/dflowfm/test_net.py index be70ea813..8df291a75 100644 --- a/tests/dflowfm/test_net.py +++ b/tests/dflowfm/test_net.py @@ -816,7 +816,7 @@ def test_network_netcdf_consistency_corrupt_file(tmp_path): extent=(-2, -2, 2, 2), dx=1, dy=1 ) - nc_file = "test.nc" + nc_file = Path("test.nc") model.save(filepath=nc_file) ds = xr.open_dataset(nc_file) diff --git a/tests/dflowfm/test_research.py b/tests/dflowfm/test_research.py index 10c626f89..d6dbf3c1c 100644 --- a/tests/dflowfm/test_research.py +++ b/tests/dflowfm/test_research.py @@ -84,6 +84,7 @@ def test_can_save_and_load_research_model_from_scratch_without_errors(self): mdu = ResearchFMModel() mdu.save(file_mdu) _ = ResearchFMModel(file_mdu) + file_mdu.unlink() def test_sedtrails_fromscratch(self): model = ResearchFMModel() diff --git a/tests/rr/test_fnm.py b/tests/rr/test_fnm.py index dd399591e..7ecb89798 100644 --- a/tests/rr/test_fnm.py +++ b/tests/rr/test_fnm.py @@ -330,8 +330,11 @@ def test_fnm_save_as_with_recurse_correctly_copies_subfiles(): target_path = test_output_dir / name if target_path.exists() and target_path.is_dir(): - shutil.rmtree(target_path) - target_path.mkdir() + try: + shutil.rmtree(target_path) + target_path.mkdir() + except PermissionError: + pass with file_load_context() as context: context.push_new_parent(source_path_parent, ResolveRelativeMode.ToParent) @@ -359,8 +362,11 @@ def test_fnm_save_without_recurse_only_copies_fnm_file(): target_path = test_output_dir / name if target_path.exists() and target_path.is_dir(): - shutil.rmtree(target_path) - target_path.mkdir() + try: + shutil.rmtree(target_path) + target_path.mkdir() + except PermissionError: + pass with file_load_context() as context: context.push_new_parent(source_path_parent, ResolveRelativeMode.ToParent) @@ -387,8 +393,11 @@ def test_dimr_model_save_with_recurse_correctly_copies_rr_sub_files(): target_path = test_output_dir / name if target_path.exists() and target_path.is_dir(): - shutil.rmtree(target_path) - target_path.mkdir() + try: + shutil.rmtree(target_path) + target_path.mkdir() + except PermissionError: + pass with file_load_context() as context: context.push_new_parent(source_path_parent, ResolveRelativeMode.ToParent) diff --git a/tests/rr/topology/test_serializer.py b/tests/rr/topology/test_serializer.py index 216cb0fb9..ab154fc7d 100644 --- a/tests/rr/topology/test_serializer.py +++ b/tests/rr/topology/test_serializer.py @@ -2,14 +2,14 @@ from hydrolib.core.basemodel import ModelSaveSettings, SerializerConfig from hydrolib.core.rr.topology.serializer import LinkFileSerializer, NodeFileSerializer -from tests.utils import assert_files_equal, test_output_dir, test_reference_dir +from tests.utils import assert_files_equal class TestNodeFileSerializer: - def test_serialize(self): + def test_serialize(self, output_files_dir: Path, reference_files_dir: Path): - output_file = Path(test_output_dir / "rr" / "serialize_node.tp") - reference_file = Path(test_reference_dir / "rr" / "serialize_node.tp") + output_file = output_files_dir.joinpath("rr/serialize_node.tp") + reference_file = reference_files_dir.joinpath("rr/serialize_node.tp") data = dict( node=[create_node_values(), create_node_values(), create_node_values()] @@ -36,10 +36,10 @@ def create_node_values() -> dict: class TestLinkFileSerializer: - def test_serialize(self): + def test_serialize(self, output_files_dir: Path, reference_files_dir: Path): - output_file = Path(test_output_dir / "rr" / "serialize_link.tp") - reference_file = Path(test_reference_dir / "rr" / "serialize_link.tp") + output_file = output_files_dir.joinpath("rr/serialize_link.tp") + reference_file = reference_files_dir.joinpath("rr/serialize_link.tp") data = dict( link=[create_link_values(), create_link_values(), create_link_values()] diff --git a/tests/test_basemodel.py b/tests/test_basemodel.py index b98cbd9f7..9a7a6cc4e 100644 --- a/tests/test_basemodel.py +++ b/tests/test_basemodel.py @@ -159,10 +159,16 @@ def test_save_and_load_maintains_correct_paths( ) if _external_path.exists(): - shutil.rmtree(_external_path) + try: + shutil.rmtree(_external_path) + except PermissionError: + pass if output_dir.exists(): - shutil.rmtree(output_dir) + try: + shutil.rmtree(output_dir) + except PermissionError: + pass model_path = output_dir / "fm.mdu" diff --git a/tests/test_model.py b/tests/test_model.py index f40798013..9b5fc92e6 100644 --- a/tests/test_model.py +++ b/tests/test_model.py @@ -111,9 +111,9 @@ def test_initialize_default_dimr_does_not_raise_exception(): DIMR() -def test_dimr_model_save(): - file = Path(test_output_dir / "model" / "test_dimr_model_save.xml") - reference_file = Path(test_reference_dir / "model" / "test_dimr_model_save.xml") +def test_dimr_model_save(output_files_dir: Path, reference_files_dir: Path): + file = output_files_dir.joinpath("model/test_dimr_model_save.xml") + reference_file = reference_files_dir.joinpath("model/test_dimr_model_save.xml") dimr = DIMR() dimr.documentation.creationDate = datetime(2021, 7, 29, 12, 45) @@ -192,7 +192,10 @@ def test_mdu_model(): output_fn = output_dir / FMModel._generate_name() if output_dir.exists(): - shutil.rmtree(output_dir) + try: + shutil.rmtree(output_dir) + except PermissionError: + pass model.save(filepath=output_fn, recurse=True) diff --git a/tests/tools/test_converters.py b/tests/tools/test_converters.py new file mode 100644 index 000000000..b225414f7 --- /dev/null +++ b/tests/tools/test_converters.py @@ -0,0 +1,35 @@ +from hydrolib.core.dflowfm.extold.models import ExtOldForcing, ExtOldQuantity +from hydrolib.core.dflowfm.inifield.models import InitialField +from hydrolib.tools.ext_old_to_new.initial_condition_converter import ( + InitialConditionConverter, +) + + +class TestConvertInitialCondition: + def test_sample_data_file(self): + forcing = ExtOldForcing( + quantity=ExtOldQuantity.InitialWaterLevel, + filename="iniwaterlevel.xyz", + filetype=7, # "Polyline" + method="5", # "Interpolate space", + operand="O", + ) + + new_quantity_block = InitialConditionConverter().convert(forcing) + assert isinstance(new_quantity_block, InitialField) + assert new_quantity_block.datafiletype == "sample" + assert new_quantity_block.interpolationmethod == "triangulation" + + def test_polygon_data_file(self): + forcing = ExtOldForcing( + quantity=ExtOldQuantity.InitialWaterLevel, + filename="iniwaterlevel.pol", + value=0.0, + filetype=10, # "Polyline" + method="4", # "Interpolate space", + operand="O", + ) + new_quantity_block = InitialConditionConverter().convert(forcing) + assert new_quantity_block.datafiletype == "polygon" + assert new_quantity_block.interpolationmethod == "constant" + assert new_quantity_block.value == 0 diff --git a/tests/tools/test_ext_old_to_new.py b/tests/tools/test_ext_old_to_new.py deleted file mode 100644 index c53a402ea..000000000 --- a/tests/tools/test_ext_old_to_new.py +++ /dev/null @@ -1,63 +0,0 @@ -from pathlib import Path - -import pytest - -from hydrolib.core.dflowfm.common.models import Operand -from hydrolib.tools.ext_old_to_new import main_converter - -from ..utils import ( - assert_files_equal, - create_temp_file_from_lines, - get_temp_file, - test_input_dir, -) - - -class TestExtOldToNew: - def test_wind_combi_uniform_curvi(self): - main_converter._verbose = True - mdu_filename = ( - test_input_dir - / "e02" - / "f011_wind" - / "c081_combi_uniform_curvi" - / "windcase.mdu" - ) - - main_converter.ext_old_to_new_from_mdu(mdu_filename) - assert True - # assert isinstance(forcing.filename, TimModel) - - def test_extrapolate_slr(self): - main_converter._verbose = True - mdu_filename = ( - test_input_dir - / "e02" - / "f006_external_forcing" - / "c011_extrapolate_slr" - / "slrextrapol.mdu" - ) - main_converter.ext_old_to_new_from_mdu(mdu_filename) - assert True - - def test_basinsquares(self): - main_converter._verbose = True - mdu_filename = ( - test_input_dir - / "e02" - / "f006_external_forcing" - / "c020_basinnofriction_squares" - / "basinsquares.mdu" - ) - try: - main_converter.ext_old_to_new_from_mdu(mdu_filename) - except Exception as e: - pass - - assert True - - def test_recursive(self): - main_converter._verbose = True - dir = test_input_dir / "e02" / "f006_external_forcing" - main_converter.ext_old_to_new_dir_recursive(dir) - assert True diff --git a/tests/tools/test_main_converter.py b/tests/tools/test_main_converter.py new file mode 100644 index 000000000..ea03d8b43 --- /dev/null +++ b/tests/tools/test_main_converter.py @@ -0,0 +1,111 @@ +from pathlib import Path +from typing import Dict, List + +from hydrolib.tools.ext_old_to_new import main_converter +from hydrolib.tools.ext_old_to_new.main_converter import ( + _read_ext_old_data, + ext_old_to_new, + ext_old_to_new_dir_recursive, + ext_old_to_new_from_mdu, +) + + +class TestExtOldToNew: + def test_wind_combi_uniform_curvi(self, capsys, input_files_dir: Path): + main_converter._verbose = True + mdu_filename = input_files_dir.joinpath( + "e02/f011_wind/c081_combi_uniform_curvi/windcase.mdu" + ) + ext_old_to_new_from_mdu(mdu_filename) + captured = capsys.readouterr() + assert captured.out.startswith( + f"Could not read {mdu_filename} as a valid FM model:" + ) + + def test_extrapolate_slr(self, capsys, input_files_dir: Path): + main_converter._verbose = True + mdu_filename = input_files_dir.joinpath( + "e02/f006_external_forcing/c011_extrapolate_slr/slrextrapol.mdu" + ) + ext_old_to_new_from_mdu(mdu_filename) + captured = capsys.readouterr() + assert captured.out.startswith( + f"Could not read {mdu_filename} as a valid FM model:" + ) + + def test_basinsquares(self, capsys, input_files_dir: Path): + main_converter._verbose = True + mdu_filename = input_files_dir.joinpath( + "e02/f006_external_forcing/c020_basinnofriction_squares/basinsquares.mdu" + ) + ext_old_to_new_from_mdu(mdu_filename) + captured = capsys.readouterr() + assert captured.out.startswith( + f"Could not read {mdu_filename} as a valid FM model:" + ) + + def test_recursive(self, capsys, input_files_dir: Path): + main_converter._verbose = True + path = input_files_dir.joinpath("e02/f006_external_forcing") + ext_old_to_new_dir_recursive(path) + + +def test__read_ext_old_data( + capsys, + old_forcing_file: Path, + old_forcing_file_quantities: List[str], + old_forcing_comment_len: int, +): + model = _read_ext_old_data(old_forcing_file) + assert len(model.forcing) == len(old_forcing_file_quantities) + assert len(model.comment) == old_forcing_comment_len + quantities = [forcing.quantity for forcing in model.forcing] + assert all([quantity in old_forcing_file_quantities for quantity in quantities]) + # test verbose + main_converter._verbose = True + _read_ext_old_data(old_forcing_file) + captured = capsys.readouterr() + print(captured.out) + assert captured.out.startswith( + f"Read {(len(old_forcing_file_quantities))} forcing blocks from {old_forcing_file}." + ) + + +class TestExtOldToNew: + + def test_ext_with_only_initial_contitions( + self, old_forcing_file_initial_condition: Dict[str, str] + ): + new_ext_file = Path("tests/data/input/new-external-forcing.ext") + new_initial_file = Path("tests/data/input/new-initial-conditions.ext") + new_structure_file = Path("tests/data/input/new-structure.ext") + + path = old_forcing_file_initial_condition["path"] + extold_model, ext_model, inifield_model, structure_model = ext_old_to_new( + path, new_ext_file, new_initial_file, new_structure_file + ) + + assert new_ext_file.exists() + assert new_initial_file.exists() + assert new_structure_file.exists() + # all the quantities in the old external file are initial conditions + # check that all the quantities (3) were converted to initial conditions + num_quantities = len(old_forcing_file_initial_condition["quantities"]) + assert len(inifield_model.initial) == num_quantities + # no parameters or any other structures, lateral or meteo data + assert len(inifield_model.parameter) == 0 + assert len(ext_model.lateral) == 0 + assert len(ext_model.meteo) == 0 + assert len(structure_model.structure) == 0 + assert [ + inifield_model.initial[i].datafiletype for i in range(num_quantities) + ] == old_forcing_file_initial_condition["file_type"] + assert [ + str(inifield_model.initial[i].datafile.filepath) + for i in range(num_quantities) + ] == old_forcing_file_initial_condition["file_path"] + # clean up + # try + new_initial_file.unlink() + new_ext_file.unlink() + new_structure_file.unlink() diff --git a/tests/tools/test_tools_utils.py b/tests/tools/test_tools_utils.py new file mode 100644 index 000000000..625ab55bb --- /dev/null +++ b/tests/tools/test_tools_utils.py @@ -0,0 +1,16 @@ +from pathlib import Path + +import pytest + +from hydrolib.core.dflowfm.ext.models import ExtModel +from hydrolib.core.dflowfm.inifield.models import IniFieldModel +from hydrolib.core.dflowfm.structure.models import StructureModel +from hydrolib.tools.ext_old_to_new.utils import construct_filemodel_new_or_existing + + +@pytest.mark.parametrize("model", [ExtModel, IniFieldModel, StructureModel]) +def test_construct_filemodel_new(model): + file = Path("tests/data/new-file") + ext_model = construct_filemodel_new_or_existing(model, file) + assert isinstance(ext_model, model) + assert ext_model.filepath == file