diff --git a/.gitattributes b/.gitattributes new file mode 100644 index 0000000..16ef5c5 --- /dev/null +++ b/.gitattributes @@ -0,0 +1,3 @@ +# GitHub syntax highlighting +pixi.lock linguist-language=YAML + diff --git a/.github/dependabot.yml b/.github/dependabot.yml new file mode 100644 index 0000000..ff6499d --- /dev/null +++ b/.github/dependabot.yml @@ -0,0 +1,7 @@ +# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates +version: 2 +updates: + - package-ecosystem: "github-actions" + directory: "/" # Location of package manifests + schedule: + interval: "weekly" \ No newline at end of file diff --git a/.gitignore b/.gitignore index aa046d2..60ae1ce 100644 --- a/.gitignore +++ b/.gitignore @@ -85,3 +85,6 @@ docs/auto_examples gistim/examples/data/ plugin/qgistim.zip +# pixi environments +.pixi/ + diff --git a/environment.yml b/environment.yml deleted file mode 100644 index c9b8e9f..0000000 --- a/environment.yml +++ /dev/null @@ -1,21 +0,0 @@ -name: tim - -channels: - - conda-forge - - defaults - -dependencies: - - black - - geopandas - - git - - matplotlib - - netCDF4 - - numba>=0.50 - - numpy - - pandas - - python>=3.8 - - rioxarray - - scipy - - timml - - ttim - - xarray>=0.15 diff --git a/gistim/__init__.py b/gistim/__init__.py index d25416e..a33197b 100644 --- a/gistim/__init__.py +++ b/gistim/__init__.py @@ -1,10 +1,3 @@ -import pkg_resources - import gistim.compute -# version -try: - __version__ = pkg_resources.get_distribution(__name__).version -except pkg_resources.DistributionNotFound: - # package is not installed - pass +__version__ = "0.5.3" \ No newline at end of file diff --git a/gistim/__main__.py b/gistim/__main__.py index 40e7d68..55b9d55 100644 --- a/gistim/__main__.py +++ b/gistim/__main__.py @@ -8,6 +8,12 @@ from pathlib import Path from typing import Any, Dict +import timml +# Make sure we explicitly import besselaesnumba for pyinstaller. +# It's a dynamic import inside of timml. +from timml.besselaesnumba import besselaesnumba # noqa: F401 +import ttim + import gistim @@ -46,8 +52,6 @@ def write_configjson(path: Path, data: Dict[str, Any]) -> None: def write_versions(): # Store version numbers - 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By installing from PyPI instead, we can skip MKL. +# We do need to declare `future` explicitly, as pixi will complain that on PyPI, +# no wheels can be found. +[pypi-dependencies] +lmfit = "*" +numpy = "*" +pandas = "*" +pyinstaller = "*" +timml = "==6.3.0" +ttim = "==0.6.5" +scipy = "*" +xarray = "*" \ No newline at end of file diff --git a/plugin/qgistim/core/server_handler.py b/plugin/qgistim/core/server_handler.py index 6ff3a31..b6b0169 100644 --- a/plugin/qgistim/core/server_handler.py +++ b/plugin/qgistim/core/server_handler.py @@ -65,7 +65,7 @@ def start_server(self, interpreter: str) -> Dict[str, Any]: """ env_vars = self.environmental_variables() self.process = subprocess.Popen( - [interpreter, "-u", "-m", "gistim", "serve"], + [interpreter, "serve"], stdin=subprocess.PIPE, stdout=subprocess.PIPE, stderr=subprocess.PIPE, diff --git a/setup.cfg b/setup.cfg deleted file mode 100644 index 79ffdb1..0000000 --- a/setup.cfg +++ /dev/null @@ -1,13 +0,0 @@ -[flake8] -ignore = - # whitespace before ':' - doesn't work well with black - E203, - # module level import not at top of file - E402, - # line too long - let black worry about that - E501, - # line break before binary operator - W503, -per-file-ignores = - __init__.py:F401 - ./docs/conf.py:F401