Version 1.2.6

What's Changed

• Include parameters in ppc annotation attributes. by @manthey in #987
• Fixed bug in find_stain_index.py by @Estelle900 in #985
• Add an optional progress callback to superpixel segmentation by @manthey in #988

New Contributors

• @Estelle900 made their first contribution in #985

Full Changelog: v1.2.5...v1.2.6

Version 1.2.5

What's Changed

• Fix bugbear b028 warnings. by @manthey in #974
• Reduce test warnings. by @manthey in #976
• Fix some issues with the gaussian voting code by @manthey in #978
• Make dask quieter. by @manthey in #979
• Modify code to work with pandas 2. by @manthey in #982

Full Changelog: v1.2.4...v1.2.5

Version 1.2.4

What's Changed

• Emit more compact json. by @manthey in #958
• Refactor the docker to make it smaller. by @manthey in #962
• Update for numpy 1.24. by @manthey in #967
• Test on Python 3.11. by @manthey in #969
• Fix an order of operations issue in PPC. by @manthey in #972

Full Changelog: v1.2.3...v1.2.4

Version 1.2.3

What's Changed

• Fix an issue where we were using at instead of iloc. by @manthey in #956

Full Changelog: v1.2.2...v1.2.3

Version 1.2.2

What's Changed

• fixed numerical issues with Haralick.Correlation and Haralick.IMC2 by @idc9 in #947
• Fix linting issues. by @manthey in #950
• Add superpixel segmentation magnification parameter. by @manthey in #951
• Optionally output bounding box annotations associated with superpixels by @manthey in #952
• Support emitting internal bounding box information by @manthey in #953
• Improve superpixel annotation name. by @manthey in #954
• Adjust the length of the value array. by @manthey in #955

New Contributors

• @idc9 made their first contribution in #947

Full Changelog: v1.2.1...v1.2.2

Version 1.2.1

v1.2.1

Adjust tests for scikit-image changes. (#944)

Version 1.2.0

Features

• Superpixel pixelmap CLI (#925)

Improvements

• Better installation requirements (#927)
• Python 3.10 testing (#923)
• Color deconvolution CLI can emit image annotations (#922)
• Faster initial import (#921)
• Improve performance and behavior of cellularity_detection_superpixels.py (#912)
• Accommodate missing keys in annotations when parsing to table (#911)
• Improve performance and behavior of trace_object_boundaries.py (#910)
• Added flexibility to tiled array polygon merger (#909)
• Refactor and extend compute nuclear features (#908)

Bug Fixes

• Edit bug in accessing attribute weighted_centroid (#917)
• Guarantee correspondence between nuclear and cytoplasmic features (#907)
• Fix nuclear feature extraction by ensuring label and location is returned (#904)
• Fix object mask to be restricted to unique products (#895)

Version 1.1.0

Changes

• Dropped support for Python 2.7 and 3.5 (#890)
• Include sdist in release (#891)

Version 1.0.7

Notes

• This will be the last version to support Python 2.7 and 3.5.

Version 1.0.6

Change requirements for non-linux installations to make it easier to pip install.