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ensembl_species.txt
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Abingdon island giant tortoise,Chelonoidis abingdonii,106734
Agassiz's desert tortoise,Gopherus agassizii,38772
Algerian mouse,Mus spretus,10096
Alpaca,Vicugna pacos,30538
Alpine marmot,Marmota marmota marmota,9994
Amazon molly,Poecilia formosa,48698
American beaver,Castor canadensis,51338
American bison,Bison bison bison,43346
American black bear,Ursus americanus,9643
American mink,Neovison vison,452646
Angola colobus,Colobus angolensis palliatus,336983
Anole lizard,Anolis carolinensis,28377
Arctic ground squirrel,Urocitellus parryii,9999
Argentine black and white tegu,Salvator merianae,96440
Armadillo,Dasypus novemcinctus,9361
Asian bonytongue,Scleropages formosus,113540
Australian saltwater crocodile,Crocodylus porosus,8502
Ballan wrasse,Labrus bergylta,56723
Barramundi perch,Lates calcarifer,8187
Bengalese finch,Lonchura striata domestica,299123
Bicolor damselfish,Stegastes partitus,144197
Black snub-nosed monkey,Rhinopithecus bieti,61621
Blue tit,Cyanistes caeruleus,156563
Blue-crowned manakin,Lepidothrix coronata,321398
Bolivian squirrel monkey,Saimiri boliviensis boliviensis,39432
Bonobo,Pan paniscus,9597
Brazilian guinea pig,Cavia aperea,37548
Budgerigar,Melopsittacus undulatus,13146
Burton's mouthbrooder,Haplochromis burtoni,8153
Bushbaby,Otolemur garnettii,30611
C.intestinalis,Ciona intestinalis,7719
C.savignyi,Ciona savignyi,51511
C. elegans,Caenorhabditis elegans,6239
Capuchin,Cebus capucinus imitator,1737458
Cat,Felis catus,9685
Central bearded dragon,Pogona vitticeps,103695
Channel catfish,Ictalurus punctatus,7998
Chicken,Gallus gallus,9031
Chilean tinamou,Nothoprocta perdicaria,30464
Chimpanzee,Pan troglodytes,9598
Chinese hamster CHOK1GS,Cricetulus griseus,10029
Chinese hamster CriGri,Cricetulus griseus,10029
Chinese hamster PICR,Cricetulus griseus,10029
Chinese softshell turtle,Pelodiscus sinensis,13735
Climbing perch,Anabas testudineus,64144
Clown anemonefish,Amphiprion ocellaris,80972
Cod,Gadus morhua,8049
Coelacanth,Latimeria chalumnae,7897
Common canary,Serinus canaria,9135
Common wombat,Vombatus ursinus,29139
Coquerel's sifaka,Propithecus coquereli,379532
Cow,Bos taurus,9913
Crab-eating macaque,Macaca fascicularis,9541
Damara mole rat,Fukomys damarensis,885580
Dark-eyed junco,Junco hyemalis,40217
Daurian ground squirrel,Spermophilus dauricus,99837
Degu,Octodon degus,10160
Dingo,Canis lupus dingo,286419
Dog,Canis lupus familiaris,9615
Dolphin,Tursiops truncatus,9739
Dolphin,Tursiops truncatus,9739
Donkey,Equus asinus asinus,83772
Drill,Mandrillus leucophaeus,9568
D. melanogaster,Drosophila melanogaster,7227
Duck,Anas platyrhynchos platyrhynchos,8840
Eastern happy,Astatotilapia calliptera,8154
Electric eel,Electrophorus electricus,8005
Elephant,Loxodonta africana,9785
Elephant shark,Callorhinchus milii,7868
Emu,Dromaius novaehollandiae,8790
Ferret,Mustela putorius furo,9669
Flycatcher,Ficedula albicollis,59894
Fugu,Takifugu rubripes,31033
Gelada,Theropithecus gelada,9565
Gibbon,Nomascus leucogenys,61853
Goat,Capra hircus,9925
Golden Hamster,Mesocricetus auratus,10036
Golden snub-nosed monkey,Rhinopithecus roxellana,61622
Golden-collared manakin,Manacus vitellinus,328815
Gorilla,Gorilla gorilla gorilla,9595
Great Tit,Parus major,9157
Great spotted kiwi,Apteryx haastii,8823
Greater amberjack,Seriola dumerili,41447
Greater bamboo lemur,Prolemur simus,1328070
Guinea Pig,Cavia porcellus,10141
Guppy,Poecilia reticulata,8081
Hagfish,Eptatretus burgeri,7764
Hamadryas Baboon,Papio hamadryas,9557
Hedgehog,Erinaceus europaeus,9365
Hedgehog,Erinaceus europaeus,9365
Helmeted guineafowl,Numida meleagris,8996
Horse,Equus caballus,9796
Huchen,Hucho hucho,62062
Human,Homo sapiens,9606
Hybrid - Bos Indicus,Bos indicus x Bos taurus,30522
Hybrid - Bos Taurus,Bos indicus x Bos taurus,30522
Hyrax,Procavia capensis,9813
Indian medaka,Oryzias melastigma,30732
Japanese medaka HNI,Oryzias latipes,8090
Japanese medaka HSOK,Oryzias latipes,8090
Japanese medaka HdrR,Oryzias latipes,8090
Japanese quail,Coturnix japonica,93934
Kangaroo rat,Dipodomys ordii,10020
Koala,Phascolarctos cinereus,38626
Lamprey,Petromyzon marinus,7757
Leopard,Panthera pardus,9691
Lesser Egyptian jerboa,Jaculus jaculus,51337
Lesser hedgehog tenrec,Echinops telfairi,9371
Little spotted kiwi,Apteryx owenii,8824
Long-tailed chinchilla,Chinchilla lanigera,34839
Lyretail cichlid,Neolamprologus brichardi,32507
Ma's night monkey,Aotus nancymaae,37293
Macaque,Macaca mulatta,9544
Mainland tiger snake,Notechis scutatus,8663
Makobe Island cichlid,Pundamilia nyererei,303518
Mangrove rivulus,Kryptolebias marmoratus,37003
Marmoset,Callithrix jacchus,9483
Megabat,Pteropus vampyrus,132908
Mexican tetra,Astyanax mexicanus,7994
Microbat,Myotis lucifugus,59463
Midas cichlid,Amphilophus citrinellus,61819
Mongolian gerbil,Meriones unguiculatus,10047
Monterrey platyfish,Xiphophorus couchianus,32473
Mouse,Mus musculus,10090
Mouse 129S1/SvImJ,Mus musculus,10090
Mouse A/J,Mus musculus,10090
Mouse AKR/J,Mus musculus,10090
Mouse BALB/cJ,Mus musculus,10090
Mouse C3H/HeJ,Mus musculus,10090
Mouse C57BL/6NJ,Mus musculus,10090
Mouse CAST/EiJ,Mus musculus castaneus,10091
Mouse CBA/J,Mus musculus,10090
Mouse DBA/2J,Mus musculus,10090
Mouse FVB/NJ,Mus musculus,10090
Mouse LP/J,Mus musculus,10090
Mouse Lemur,Microcebus murinus,30608
Mouse NOD/ShiLtJ,Mus musculus,10090
Mouse NZO/HlLtJ,Mus musculus,10090
Mouse PWK/PhJ,Mus musculus musculus,39442
Mouse WSB/EiJ,Mus musculus domesticus,10092
Mummichog,Fundulus heteroclitus,8078
Naked mole-rat female,Heterocephalus glaber,10181
Naked mole-rat male,Heterocephalus glaber,10181
Northern American deer mouse,Peromyscus maniculatus bairdii,230844
Northern pike,Esox lucius,8010
Ocean sunfish,Mola mola,94237
Okarito brown kiwi,Apteryx rowi,308060
Olive baboon,Papio anubis,9555
Opossum,Monodelphis domestica,13616
Orange clownfish,Amphiprion percula,161767
Orangutan,Pongo abelii,9601
Painted turtle,Chrysemys picta bellii,8478
Panda,Ailuropoda melanoleuca,9646
P. kingsleyae,Paramormyrops kingsleyae,1676925
P. magnuspinnatus,Periophthalmus magnuspinnatus,409849
Pig,Sus scrofa,9823
Pig FPC map,Sus scrofa map,
Pig USMARC,Sus scrofa,9823
Pig-tailed macaque,Macaca nemestrina,9545
Pika,Ochotona princeps,9978
Pika,Ochotona princeps,9978
Pink-footed goose,Anser brachyrhynchus,132585
Platyfish,Xiphophorus maculatus,8083
Platypus,Ornithorhynchus anatinus,9258
Polar bear,Ursus maritimus,29073
Prairie vole,Microtus ochrogaster,79684
Rabbit,Oryctolagus cuniculus,9986
Rat,Rattus norvegicus,10116
Red fox,Vulpes vulpes,9627
Red-bellied piranha,Pygocentrus nattereri,42514
Rhinoceros,Ceratotherium simum simum,73337
Ruff,Calidris pugnax,198806
Ryukyu mouse,Mus caroli,10089
S. cerevisiae,Saccharomyces cerevisiae,4932
Sailfin molly,Poecilia latipinna,48699
Sheep,Ovis aries,9940
Sheepshead minnow,Cyprinodon variegatus,28743
Shortfin molly,Poecilia mexicana,48701
Shrew,Sorex araneus,42254
Shrew,Sorex araneus,42254
Shrew mouse,Mus pahari,10093
Sloth,Choloepus hoffmanni,9358
Sooty mangabey,Cercocebus atys,9531
Sperm whale,Physter macrocephalus,9755
Spiny chromis,Acanthochromis polyacanthus,80966
Spoon-billed sandpiper,Calidris pygmaea,425635
Spotted gar,Lepisosteus oculatus,7918
Squirrel,Ictidomys tridecemlineatus,43179
Steppe mouse,Mus spicilegus,10103
Stickleback,Gasterosteus aculeatus,69293
Swamp eel,Monopterus albus,43700
Tarsier,Carlito syrichta,1868482
Tasmanian devil,Sarcophilus harrisii,9305
Tetraodon,Tetraodon nigroviridis,99883
Tiger,Panthera tigris altaica,74533
Tiger tail seahorse,Hippocampus comes,109280
Tilapia,Oreochromis niloticus,8128
Tongue sole,Cynoglossus semilaevis,244447
Tree Shrew,Tupaia belangeri,37347
Tuatara,Sphenodon punctatus,8508
Turbot,Scophthalmus maximus,52904
Turkey,Meleagris gallopavo,9103
Ugandan red Colobus,Piliocolobus tephrosceles,591936
Upper Galilee mountains blind mole rat,Nannospalax galili,1026970
Vervet-AGM,Chlorocebus sabaeus,60711
Wallaby,Notamacropus eugenii,9315
Western mosquitofish,Gambusia affinis,33528
White-throated sparrow,Zonotrichia albicollis,44394
Wild yak,Bos mutus,72004
Xenopus,Xenopus tropicalis,8364
Yellowtail amberjack,Seriola lalandi dorsalis,1841481
Zebra Finch,Taeniopygia guttata,59729
Zebra mbuna,Maylandia zebra,106582
Zebrafish,Danio rerio,7955
Zig-zag eel,Mastacembelus armatus,205130