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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(.dbW_setConnection)
export(Grass_ANPP)
export(SMR_names)
export(SMRq_names)
export(STR_names)
export(SWPtoVWC)
export(Shrub_ANPP)
export(TranspCoeffByVegType)
export(VWCtoSWP)
export(adj_phenology_by_temp)
export(adjust_TranspirationRegions)
export(backup_copy)
export(calc_RRs_Chambers2014)
export(calc_RRs_Maestas2016)
export(calc_SMTRs)
export(calc_SiteClimate)
export(calc_dailyInputFlags)
export(check_SWRC_vs_PTF)
export(check_TranspirationRegions)
export(check_ptf_availability)
export(check_swrcp)
export(check_updatedDB)
export(check_version)
export(compare_weather)
export(dbW_IsValid)
export(dbW_addFromFolders)
export(dbW_addScenarios)
export(dbW_addSite)
export(dbW_addSites)
export(dbW_addWeatherData)
export(dbW_blob_to_weatherData)
export(dbW_check_version)
export(dbW_check_weatherData)
export(dbW_compression)
export(dbW_convert_to_GregorianYears)
export(dbW_createDatabase)
export(dbW_dataframe_aggregate)
export(dbW_dataframe_to_monthly)
export(dbW_dataframe_to_weatherData)
export(dbW_deleteSite)
export(dbW_deleteSiteData)
export(dbW_delete_duplicated_weatherData)
export(dbW_disconnectConnection)
export(dbW_estimate_WGen_coefs)
export(dbW_fixWeather)
export(dbW_generateWeather)
export(dbW_getIDs)
export(dbW_getScenarioId)
export(dbW_getScenariosTable)
export(dbW_getSiteId)
export(dbW_getSiteTable)
export(dbW_getWeatherData)
export(dbW_has_scenarioIDs)
export(dbW_has_scenarios)
export(dbW_has_siteIDs)
export(dbW_has_sites)
export(dbW_has_weatherData)
export(dbW_have_sites_all_weatherData)
export(dbW_imputeWeather)
export(dbW_setConnection)
export(dbW_substituteWeather)
export(dbW_updateSites)
export(dbW_upgrade_to_rSOILWAT2)
export(dbW_upgrade_v1to2)
export(dbW_upgrade_v2to3)
export(dbW_upgrade_v31to32)
export(dbW_upgrade_v3to31)
export(dbW_version)
export(dbW_weatherData_round)
export(dbW_weatherData_to_blob)
export(dbW_weatherData_to_dataframe)
export(dbW_weatherData_to_monthly)
export(dbW_weather_to_SOILWATfiles)
export(estimate_PotNatVeg_biomass)
export(estimate_PotNatVeg_composition)
export(estimate_PotNatVeg_roots)
export(format_timestamp)
export(getStartYear)
export(getWeatherData_folders)
export(get_evaporation)
export(get_soilmoisture)
export(get_soiltemp)
export(get_timestamp)
export(get_transpiration)
export(get_version)
export(get_years_from_weatherDF)
export(get_years_from_weatherData)
export(has_soilTemp_failed)
export(is_missing_weather)
export(list_matched_swrcs_ptfs)
export(lookup_annual_CO2a)
export(nrow_output)
export(prepare_TranspirationRegions)
export(print_mkv_files)
export(ptf_estimate)
export(ptf_names)
export(set_Markov)
export(set_WeatherHistory)
export(set_missing_weather)
export(set_requested_flags)
export(set_swCarbon)
export(set_swCloud)
export(set_swFiles)
export(set_swMarkov)
export(set_swOUT)
export(set_swProd)
export(set_swSWC)
export(set_swSite)
export(set_swSoils)
export(set_swSpinup)
export(set_swWeather)
export(set_swWeatherData)
export(set_swYears)
export(setup_time_simulation_run)
export(simTiming_ForEachUsedTimeUnit)
export(swCarbon)
export(swCloud)
export(swEstab)
export(swEstabSpecies)
export(swFiles)
export(swInputData)
export(swLog)
export(swMarkov)
export(swMonthlyScalingParams)
export(swOUT)
export(swOUT_TimeStepsForEveryKey)
export(swOUT_key)
export(swOutput)
export(swOutput_KEY)
export(swProd)
export(swSWC)
export(swSWC_hist)
export(swSite)
export(swSoils)
export(swSpinup)
export(swWeather)
export(swWeatherData)
export(swYears)
export(sw_Cheatgrass_ClimVar)
export(sw_dailyC4_TempVar)
export(sw_exec)
export(sw_inputData)
export(sw_inputDataFromFiles)
export(sw_meteo_obtain_DayMet)
export(sw_meteo_obtain_SCAN)
export(sw_out_flags)
export(sw_outputData)
export(sw_verbosity)
export(swrc_conversion)
export(swrc_names)
export(swrc_swp_to_vwc)
export(swrc_vwc_to_swp)
export(time_columns)
export(update_biomass)
export(update_requested_years)
export(upgrade_weatherDF)
export(upgrade_weatherHistory)
export(weatherGenerator_dataColumns)
export(weatherHistory)
export(weather_dataAggFun)
export(weather_dataColumns)
exportClasses(swCarbon)
exportClasses(swCloud)
exportClasses(swEstab)
exportClasses(swEstabSpecies)
exportClasses(swFiles)
exportClasses(swInputData)
exportClasses(swLog)
exportClasses(swMarkov)
exportClasses(swMonthlyScalingParams)
exportClasses(swOUT)
exportClasses(swOUT_key)
exportClasses(swOutput)
exportClasses(swOutput_KEY)
exportClasses(swProd)
exportClasses(swSWC)
exportClasses(swSWC_hist)
exportClasses(swSite)
exportClasses(swSoils)
exportClasses(swSpinup)
exportClasses(swWeather)
exportClasses(swWeatherData)
exportClasses(swYears)
exportMethods("$")
exportMethods("activate_swOUT_OutKey<-")
exportMethods("deactivate_swOUT_OutKey<-")
exportMethods("set_Markov<-")
exportMethods("set_WeatherHistory<-")
exportMethods("set_swCarbon<-")
exportMethods("set_swCloud<-")
exportMethods("set_swFiles<-")
exportMethods("set_swMarkov<-")
exportMethods("set_swOUT<-")
exportMethods("set_swProd<-")
exportMethods("set_swSWC<-")
exportMethods("set_swSite<-")
exportMethods("set_swSoils<-")
exportMethods("set_swSpinup<-")
exportMethods("set_swWeather<-")
exportMethods("set_swWeatherData<-")
exportMethods("set_swYears<-")
exportMethods("swCarbon_CO2ppm<-")
exportMethods("swCarbon_DeltaYear<-")
exportMethods("swCarbon_Scenario<-")
exportMethods("swCarbon_Use_Bio<-")
exportMethods("swCarbon_Use_WUE<-")
exportMethods("swCloud_Humidity<-")
exportMethods("swCloud_RainEvents<-")
exportMethods("swCloud_SkyCover<-")
exportMethods("swCloud_SnowDensity<-")
exportMethods("swCloud_WindSpeed<-")
exportMethods("swEstab_useEstab<-")
exportMethods("swFiles_Carbon<-")
exportMethods("swFiles_Cloud<-")
exportMethods("swFiles_Estab<-")
exportMethods("swFiles_LogFile<-")
exportMethods("swFiles_MarkovCov<-")
exportMethods("swFiles_MarkovProbs<-")
exportMethods("swFiles_Output<-")
exportMethods("swFiles_OutputPrefix<-")
exportMethods("swFiles_Prod<-")
exportMethods("swFiles_ProjDir<-")
exportMethods("swFiles_SWCsetup<-")
exportMethods("swFiles_SWRCp<-")
exportMethods("swFiles_SiteParams<-")
exportMethods("swFiles_Soils<-")
exportMethods("swFiles_WeatherPrefix<-")
exportMethods("swFiles_WeatherSetup<-")
exportMethods("swFiles_Years<-")
exportMethods("swFiles_filesIn<-")
exportMethods("swLog_setLine<-")
exportMethods("swMarkov_Conv<-")
exportMethods("swMarkov_Prob<-")
exportMethods("swOUT_OutputSeparator<-")
exportMethods("swOUT_TimeStep<-")
exportMethods("swOUT_TimeStepsForEveryKey<-")
exportMethods("swOutput_setKEY<-")
exportMethods("swProd_Albedo<-")
exportMethods("swProd_CO2Coefficients<-")
exportMethods("swProd_CanopyHeight<-")
exportMethods("swProd_Composition<-")
exportMethods("swProd_CritSoilWaterPotential<-")
exportMethods("swProd_EsTpartitioning_param<-")
exportMethods("swProd_Es_param_limit<-")
exportMethods("swProd_HydrRedstro<-")
exportMethods("swProd_HydrRedstro_use<-")
exportMethods("swProd_LitterInterParam<-")
exportMethods("swProd_MonProd_forb<-")
exportMethods("swProd_MonProd_grass<-")
exportMethods("swProd_MonProd_shrub<-")
exportMethods("swProd_MonProd_tree<-")
exportMethods("swProd_MonProd_veg<-")
exportMethods("swProd_Shade<-")
exportMethods("swProd_VegInterParam<-")
exportMethods("swSWC_FirstYear<-")
exportMethods("swSWC_HistoricData<-")
exportMethods("swSWC_HistoricList<-")
exportMethods("swSWC_Method<-")
exportMethods("swSWC_prefix<-")
exportMethods("swSWC_use<-")
exportMethods("swSite_DrainageCoefficient<-")
exportMethods("swSite_EvapCoefficients<-")
exportMethods("swSite_IntrinsicSiteParams<-")
exportMethods("swSite_ModelCoefficients<-")
exportMethods("swSite_ModelFlags<-")
exportMethods("swSite_SWClimits<-")
exportMethods("swSite_SWRCflags<-")
exportMethods("swSite_SnowSimulationParams<-")
exportMethods("swSite_SoilDensityInputType<-")
exportMethods("swSite_SoilTemperatureConsts<-")
exportMethods("swSite_SoilTemperatureFlag<-")
exportMethods("swSite_TranspCoefficients<-")
exportMethods("swSite_TranspirationRegions<-")
exportMethods("swSite_hasSWRCp<-")
exportMethods("swSoils_Layers<-")
exportMethods("swSoils_SWRCp<-")
exportMethods("swSpinup_SpinupActive<-")
exportMethods("swSpinup_SpinupDuration<-")
exportMethods("swSpinup_SpinupMode<-")
exportMethods("swSpinup_SpinupScope<-")
exportMethods("swSpinup_SpinupSeed<-")
exportMethods("swWeather_DaysRunningAverage<-")
exportMethods("swWeather_FirstYearHistorical<-")
exportMethods("swWeather_MonScalingParams<-")
exportMethods("swWeather_UseMarkov<-")
exportMethods("swWeather_UseMarkovOnly<-")
exportMethods("swWeather_UseSnow<-")
exportMethods("swWeather_pct_SnowDrift<-")
exportMethods("swWeather_pct_SnowRunoff<-")
exportMethods("swYears_EDOEY<-")
exportMethods("swYears_EndYear<-")
exportMethods("swYears_FDOFY<-")
exportMethods("swYears_StartYear<-")
exportMethods("swYears_isNorth<-")
exportMethods(get_Markov)
exportMethods(get_WeatherHistory)
exportMethods(get_swCarbon)
exportMethods(get_swCloud)
exportMethods(get_swEstab)
exportMethods(get_swFiles)
exportMethods(get_swMarkov)
exportMethods(get_swOUT)
exportMethods(get_swProd)
exportMethods(get_swSWC)
exportMethods(get_swSite)
exportMethods(get_swSoils)
exportMethods(get_swSpinup)
exportMethods(get_swWeather)
exportMethods(get_swWeatherData)
exportMethods(get_swYears)
exportMethods(swCarbon_CO2ppm)
exportMethods(swCarbon_DeltaYear)
exportMethods(swCarbon_Scenario)
exportMethods(swCarbon_Use_Bio)
exportMethods(swCarbon_Use_WUE)
exportMethods(swCloud_Humidity)
exportMethods(swCloud_RainEvents)
exportMethods(swCloud_SkyCover)
exportMethods(swCloud_SnowDensity)
exportMethods(swCloud_WindSpeed)
exportMethods(swEstab_useEstab)
exportMethods(swFiles_Carbon)
exportMethods(swFiles_Cloud)
exportMethods(swFiles_Estab)
exportMethods(swFiles_LogFile)
exportMethods(swFiles_MarkovCov)
exportMethods(swFiles_MarkovProbs)
exportMethods(swFiles_Output)
exportMethods(swFiles_OutputPrefix)
exportMethods(swFiles_Prod)
exportMethods(swFiles_ProjDir)
exportMethods(swFiles_SWCsetup)
exportMethods(swFiles_SWRCp)
exportMethods(swFiles_SiteParams)
exportMethods(swFiles_Soils)
exportMethods(swFiles_WeatherPrefix)
exportMethods(swFiles_WeatherSetup)
exportMethods(swFiles_Years)
exportMethods(swFiles_filesIn)
exportMethods(swMarkov_Conv)
exportMethods(swMarkov_Prob)
exportMethods(swOUT_OutputSeparator)
exportMethods(swOUT_TimeStep)
exportMethods(swOutput_getKEY)
exportMethods(swProd_Albedo)
exportMethods(swProd_CO2Coefficients)
exportMethods(swProd_CanopyHeight)
exportMethods(swProd_Composition)
exportMethods(swProd_CritSoilWaterPotential)
exportMethods(swProd_EsTpartitioning_param)
exportMethods(swProd_Es_param_limit)
exportMethods(swProd_HydrRedstro)
exportMethods(swProd_HydrRedstro_use)
exportMethods(swProd_LitterInterParam)
exportMethods(swProd_MonProd_forb)
exportMethods(swProd_MonProd_grass)
exportMethods(swProd_MonProd_shrub)
exportMethods(swProd_MonProd_tree)
exportMethods(swProd_MonProd_veg)
exportMethods(swProd_Shade)
exportMethods(swProd_VegInterParam)
exportMethods(swReadLines)
exportMethods(swSWC_FirstYear)
exportMethods(swSWC_HistoricData)
exportMethods(swSWC_HistoricList)
exportMethods(swSWC_Method)
exportMethods(swSWC_prefix)
exportMethods(swSWC_use)
exportMethods(swSite_DrainageCoefficient)
exportMethods(swSite_EvapCoefficients)
exportMethods(swSite_IntrinsicSiteParams)
exportMethods(swSite_ModelCoefficients)
exportMethods(swSite_ModelFlags)
exportMethods(swSite_SWClimits)
exportMethods(swSite_SWRCflags)
exportMethods(swSite_SnowSimulationParams)
exportMethods(swSite_SoilDensityInputType)
exportMethods(swSite_SoilTemperatureConsts)
exportMethods(swSite_SoilTemperatureFlag)
exportMethods(swSite_TranspCoefficients)
exportMethods(swSite_TranspirationRegions)
exportMethods(swSite_hasSWRCp)
exportMethods(swSoils_Layers)
exportMethods(swSoils_SWRCp)
exportMethods(swSpinup_SpinupActive)
exportMethods(swSpinup_SpinupDuration)
exportMethods(swSpinup_SpinupMode)
exportMethods(swSpinup_SpinupScope)
exportMethods(swSpinup_SpinupSeed)
exportMethods(swWeather_DaysRunningAverage)
exportMethods(swWeather_FirstYearHistorical)
exportMethods(swWeather_MonScalingParams)
exportMethods(swWeather_UseMarkov)
exportMethods(swWeather_UseMarkovOnly)
exportMethods(swWeather_UseSnow)
exportMethods(swWeather_pct_SnowDrift)
exportMethods(swWeather_pct_SnowRunoff)
exportMethods(swYears_EDOEY)
exportMethods(swYears_EndYear)
exportMethods(swYears_FDOFY)
exportMethods(swYears_StartYear)
exportMethods(swYears_isNorth)
exportMethods(sw_upgrade)
importFrom(methods,"as<-")
importFrom(methods,"slot<-")
importFrom(methods,as)
importFrom(methods,callNextMethod)
importFrom(methods,getSlots)
importFrom(methods,inheritedSlotNames)
importFrom(methods,new)
importFrom(methods,slot)
importFrom(methods,slotNames)
importFrom(methods,validObject)
importFrom(stats,aggregate)
importFrom(stats,coef)
importFrom(stats,complete.cases)
importFrom(stats,cor)
importFrom(stats,cov)
importFrom(stats,fitted)
importFrom(stats,median)
importFrom(stats,na.exclude)
importFrom(stats,na.omit)
importFrom(stats,predict)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(stats,weighted.mean)
useDynLib(rSOILWAT2, .registration = TRUE, .fixes = "C_")