template.tex

% This is the Duke University Statistical Science LaTeX thesis template.
% It has been adapted from the Reed College LaTeX thesis template. The
% adaptation was done by Mine Cetinkaya-Rundel (MCR). Some of the comments
% that are specific to Reed College have been removed.
%
% Most of the work on the original Reed College document class and template
% was done by Sam Noble (SN). Later comments etc. by Ben Salzberg (BTS).
% Additional restructuring and APA support by Jess Youngberg (JY).
%
% See https://www.reed.edu/cis/help/latex/ for help. There are a
% great bunch of help pages there, with notes on
% getting started, bibtex, etc. Go there and read it if you're not
% already familiar with LaTeX.
%
% Any line that starts with a percent symbol is a comment.
% They won't show up in the document, and are useful for notes
% to yourself and explaining commands.
% Commenting also removes a line from the document;
% very handy for troubleshooting problems. -BTS

%%
%% Preamble
%%
% \documentclass{<something>} must begin each LaTeX document
\documentclass[12pt,twoside]{dukestatscithesis}
% Packages are extensions to the basic LaTeX functions. Whatever you
% want to typeset, there is probably a package out there for it.
% Chemistry (chemtex), screenplays, you name it.
% Check out CTAN to see: http://www.ctan.org/
%%
\usepackage{graphicx,latexsym}
\usepackage{amsmath}
\usepackage{amssymb,amsthm}
\usepackage{longtable,booktabs,setspace}
\usepackage{chemarr} %% Useful for one reaction arrow, useless if you're not a chem major
\usepackage[hyphens]{url}
% Added by CII
\usepackage{hyperref}
\usepackage{lmodern}
\usepackage{float}
\floatplacement{figure}{H}
% End of CII addition
\usepackage{rotating}

% Next line commented out by CII
%%% \usepackage{natbib}
% Comment out the natbib line above and uncomment the following two lines to use the new
% biblatex-chicago style, for Chicago A. Also make some changes at the end where the
% bibliography is included.
%\usepackage{biblatex-chicago}
%\bibliography{thesis}


% Added by CII (Thanks, Hadley!)
% Use ref for internal links
\renewcommand{\hyperref}[2][???]{\autoref{#1}}
\def\chapterautorefname{Chapter}
\def\sectionautorefname{Section}
\def\subsectionautorefname{Subsection}
% End of CII addition

% Added by CII
\usepackage{caption}
\captionsetup{width=5in}
% End of CII addition

% \usepackage{times} % other fonts are available like times, bookman, charter, palatino


% To pass between YAML and LaTeX the dollar signs are added by CII
\title{$title$}
\author{$author$}
% The month and year that you submit your FINAL draft TO THE LIBRARY (May or December)
\date{$date$}
\advisor{$advisor$}
\institution{$institution$}
\degree{$degree$}
\committeememberone{$committeememberone$}
\committeemembertwo{$committeemembertwo$}
\dus{$dus$}
%If you have two advisors for some reason, you can use the following
% Uncommented out by CII
$if(altadvisor)$
\altadvisor{$altadvisor$}
$endif$
% End of CII addition

%%% Remember to use the correct department!
\department{$department$}

% Added by CII
%%% Copied from knitr
%% maxwidth is the original width if it's less than linewidth
%% otherwise use linewidth (to make sure the graphics do not exceed the margin)
\makeatletter
\def\maxwidth{ %
  \ifdim\Gin@nat@width>\linewidth
    \linewidth
  \else
    \Gin@nat@width
  \fi
}
\makeatother

\renewcommand{\contentsname}{Table of Contents}
% End of CII addition

\setlength{\parskip}{0pt}

% Added by CII
$if(space_between_paragraphs)$
  %\setlength{\parskip}{\baselineskip}
  \usepackage[parfill]{parskip}
$endif$

\providecommand{\tightlist}{%
  \setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}}

\Acknowledgements{
$acknowledgements$
}

\Dedication{
$dedication$
}

\Preface{
$preface$
}

\Abstract{
$abstract$
}

$for(header-includes)$
	$header-includes$
$endfor$
% End of CII addition
%%
%% End Preamble
%%
%

\begin{document}

% Everything below added by CII
$if(title)$
  \maketitle
$endif$

\frontmatter % this stuff will be roman-numbered
\pagestyle{empty} % this removes page numbers from the frontmatter

$if(acknowledgements)$
  \begin{acknowledgements}
    $acknowledgements$
  \end{acknowledgements}
$endif$

$if(preface)$
  \begin{preface}
    $preface$
  \end{preface}
$endif$

$if(toc)$
  \hypersetup{linkcolor=$if(toccolor)$$toccolor$$else$black$endif$}
  \setcounter{tocdepth}{$toc-depth$}
  \tableofcontents
$endif$

$if(lot)$
  \listoftables
$endif$

$if(lof)$
  \listoffigures
$endif$

$if(abstract)$
  \begin{abstract}
    $abstract$
  \end{abstract}
$endif$

$if(dedication)$
  \begin{dedication}
    $dedication$
  \end{dedication}
$endif$

\mainmatter % here the regular arabic numbering starts
\pagestyle{fancyplain} % turns page numbering back on

$body$


% Index?

\end{document}