diff --git a/falconz/image_conversion.py b/falconz/image_conversion.py index 2b1ae6e..b87d1ed 100644 --- a/falconz/image_conversion.py +++ b/falconz/image_conversion.py @@ -236,7 +236,7 @@ def merge3d(nifti_dir: str, wild_card: str, nifti_outfile: str) -> None: """ logging.info(f"Merging 3D nifti files in {nifti_dir} with wildcard {wild_card}") files_to_merge = fop.get_files(nifti_dir, wild_card) - numeric_sorted_files_to_merge = sorted(files_to_merge, key=numeric_sort_key) + numeric_sorted_files_to_merge = sorted(files_to_merge, key=fop.numeric_sort_key) nib.save(nib.funcs.concat_images(numeric_sorted_files_to_merge, False), nifti_outfile) os.chdir(nifti_dir) logging.info("Done")