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Surface-based ROIs of Allen Human Gene Expression Atlas samples in individual and common (fsaverage) spaces

  1. Freesurfer V.6 pial/white matter cortical surface reconstructions using both T1-weight and T2-weighted MRIs for all 6 subjects. T2-weighted MRIs were used to improve accuracy of pial surface reconstruction.
  2. Cortical samples were extracted and they were mapped onto white matter surface.
  3. Circular surface-based region-of-interests (ROIs) with 5 mm radius were created for each sample and is available for download under <subject>/samples/labels_in_subject_space)
  4. Circular ROIs were mapped to fsaverage space and are available for download under data/images/reconall/<subject>/samples/labels_in_fsaverage_space

Given the large size of the files, link to dropbox folder is provided:

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