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JR-1991JR-1991
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Merge pull request #68 from EnzymeML/add-celsius
Add celsius as unit
2 parents eb19c84 + b2bb4f1 commit e8d6dc5

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‎pyenzyme/model.py

Lines changed: 20 additions & 18 deletions
Original file line numberDiff line numberDiff line change
@@ -1,11 +1,13 @@
11
## This is a generated file. Do not modify it manually!
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33
from __future__ import annotations
4-
from pydantic import BaseModel, Field, ConfigDict
5-
from typing import Optional, Generic, TypeVar
4+
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from enum import Enum
6+
from typing import Generic, Optional, TypeVar
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from uuid import uuid4
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9+
from pydantic import BaseModel, ConfigDict, Field
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# Filter Wrapper definition used to filter a list of objects
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# based on their attributes
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Cls = TypeVar("Cls")
@@ -104,8 +106,8 @@ class EnzymeMLDocument(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"name": "schema:title",
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"references": {
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"@id": "schema:citation",
@@ -540,8 +542,8 @@ class Creator(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"given_name": "schema:givenName",
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"family_name": "schema:familyName",
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"mail": "schema:email",
@@ -638,8 +640,8 @@ class Vessel(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"id": {
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"@id": "schema:identifier",
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"@type": "@id",
@@ -743,8 +745,8 @@ class Protein(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"id": {
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"@type": "@id",
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},
@@ -854,8 +856,8 @@ class Complex(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"id": {
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"@id": "schema:identifier",
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"@type": "@id",
@@ -960,8 +962,8 @@ class SmallMolecule(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"id": {
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"@id": "schema:identifier",
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"@type": "@id",
@@ -1071,8 +1073,8 @@ class Reaction(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"id": {
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"@id": "schema:identifier",
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"@type": "@id",
@@ -1199,8 +1201,8 @@ class ReactionElement(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"species_id": {
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"@type": "@id",
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},
@@ -1300,8 +1302,8 @@ class Equation(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"species_id": {
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"@type": "@id",
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},
@@ -1461,8 +1463,8 @@ class Parameter(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"id": {
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"@id": "schema:identifier",
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"@type": "@id",
@@ -1564,8 +1566,8 @@ class Measurement(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"id": {
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"@id": "schema:identifier",
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"@type": "@id",
@@ -1713,8 +1715,8 @@ class MeasurementData(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
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"OBO": "http://purl.obolibrary.org/obo/",
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"species_id": {
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"@type": "@id",
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},
@@ -1811,8 +1813,8 @@ class UnitDefinition(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
1814-
"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
1817+
"OBO": "http://purl.obolibrary.org/obo/",
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},
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)
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@@ -1941,8 +1943,8 @@ class BaseUnit(BaseModel):
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serialization_alias="@context",
19421944
default_factory=lambda: {
19431945
"enzml": "http://www.enzymeml.org/v2/",
1944-
"OBO": "http://purl.obolibrary.org/obo/",
19451946
"schema": "https://schema.org/",
1947+
"OBO": "http://purl.obolibrary.org/obo/",
19461948
},
19471949
)
19481950

@@ -2036,8 +2038,8 @@ class EqVariable(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
2039-
"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
2042+
"OBO": "http://purl.obolibrary.org/obo/",
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"id": {
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"@type": "@id",
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},
@@ -2135,8 +2137,8 @@ class EqParameter(BaseModel):
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serialization_alias="@context",
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default_factory=lambda: {
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"enzml": "http://www.enzymeml.org/v2/",
2138-
"OBO": "http://purl.obolibrary.org/obo/",
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"schema": "https://schema.org/",
2141+
"OBO": "http://purl.obolibrary.org/obo/",
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"id": {
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"@type": "@id",
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},

‎pyenzyme/units/predefined.py

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -144,6 +144,7 @@ def dimensionless():
144144
kelvin = UnitDefinition(base_units=[Unit.kelvin()])._get_name()
145145
K = UnitDefinition(base_units=[Unit.kelvin()])._get_name()
146146
celsius = UnitDefinition(base_units=[Unit.celsius()])._get_name()
147+
C = UnitDefinition(base_units=[Unit.celsius()])._get_name()
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## Ontology
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