lecture09

Lecture 09: Practical analyses in Python

This lecture will continue using Python to perform biological sequence analyses. In particular, we will use Biopython to read in sequencing data and process sequences.

Learning objectives

After this lecture, you should be able to:

• Read sequencing files into Python using BioPython
• Use BioPython methods to work with sequence data
• Parse barcodes from a real deep-sequencing experiment

Class materials

• The content for this lecture is containing in the Jupyter notebook lecture09.ipynb located in this directory. Some of the content from lecture 08 is duplicated here for your convenience.