update headers and paths

Author: tony-kuo

docs/notebooks/cell_search_tutorial_1.ipynb

@@ -111,8 +111,7 @@
    "source": [
     "# Instantiate the CellQuery object.\n",
     "# Replace model_path with your local file path.\n",
-    "from scimilarity import ModelPath\n",
-    "model_path = ModelPath.model_paper\n",
+    "model_path = '/models/model_v1'\n",
     "cq = CellQuery(model_path)"
    ]
   },
@@ -229,8 +228,7 @@
    "id": "3b5ba1f3-4371-4b1f-9165-8d84f5377c96",
    "metadata": {},
    "source": [
-    "### Compute visualization of embeddings\n",
-    "#### Use UMAP to visualize SCimilarity embeddings"
+    "### Compute visualization of embeddings"
    ]
   },
   {
@@ -365,7 +363,7 @@
    "id": "a3aac50b-09c3-4d2d-b66e-208d476773cd",
    "metadata": {},
    "source": [
-    "**GSM4058950** contains good quality myofibroblasts (based on the expression of myofibroblast canonical markers) "
+    "GSM4058950 contains good quality myofibroblasts (based on the expression of myofibroblast canonical markers) "
    ]
   },
   {
@@ -528,7 +526,7 @@
    "id": "3cfde83f-e498-424e-9d55-fdbf2b872aec",
    "metadata": {},
    "source": [
-    "##### Exclude self-referencing results\n",
+    "#### Exclude self-referencing results\n",
     "Naturally, queries searching for similar cells will highlight cells from the same study. To get a clearer view of the results, we often exclude those self-referencing hits."
    ]
   },