Makefile

# MAKEFILE
#
# @author      Nicola Asuni <nicola.asuni@genomicsplc.com>
# @link        https://github.com/genomicsplc/variantkey
# ------------------------------------------------------------------------------

# List special make targets that are not associated with files
.PHONY: help c go javascript python python-class r format clean pubdocs

# CVS path (path to the parent dir containing the project)
CVSPATH=github.com/genomicsplc

# Project vendor
VENDOR=genomicsplc

# Project name
PROJECT=variantkey

# --- MAKE TARGETS ---

# Display general help about this command
help:
	@echo ""
	@echo "VariantKey Makefile."
	@echo "The following commands are available:"
	@echo ""
	@echo "    make c            : Build and test the C version"
	@echo "    make go           : Build and test the GO version"
	@echo "    make javascript   : Build and test the Javascript version"
	@echo "    make python       : Build and test the Python version"
	@echo "    make python-class : Build and test the Python wrapper class"
	@echo "    make r            : Build and test the R version"
	@echo "    make clean        : Remove any build artifact"
	@echo "    make dbuild       : Build everything inside a Docker container"
	@echo ""

all: clean c go javascript python python-class r

# Build and test the C version
c:
	cd c && make all

# Build and test the GO version
go:
	cd go && make all

# Build and test the Javascript version
javascript:
	cd javascript && make all

# Build and test the Python version
python:
	cd python && make all

# Build and test the Python wrapper class
python-class:
	cd python-class && make all

# Build and test the R version
r:
	cd r && make all

# Remove any build artifact
clean:
	rm -rf target
	cd c && make clean
	cd go && make clean
	cd javascript && make clean
	cd python && make clean
	cd r && make clean

# Build everything inside a Docker container
dbuild:
	@mkdir -p target
	@rm -rf target/*
	@echo 0 > target/make.exit
	CVSPATH=$(CVSPATH) VENDOR=$(VENDOR) PROJECT=$(PROJECT) MAKETARGET='$(MAKETARGET)' ./dockerbuild.sh
	@exit `cat target/make.exit`

# Publish Documentation in GitHub (requires writing permissions)
pubdocs:
	rm -rf ./target/DOCS
	rm -rf ./target/gh-pages
	mkdir -p ./target/DOCS/c
	cp -r ./c/target/build/doc/html/* ./target/DOCS/c/
	mkdir -p ./target/DOCS/go
	cp -r ./go/target/docs/* ./target/DOCS/go/
	mkdir -p ./target/DOCS/python
	cp -r ./python/target/doc/variantkey.html ./target/DOCS/python/
	mkdir -p ./target/DOCS/python-class
	cp -r ./python-class/target/doc/*.html ./target/DOCS/python-class/
	mkdir -p ./target/DOCS/r
	cp -r ./r/variantkey/docs/* ./target/DOCS/r/
	cp ./resources/doc/index.html ./target/DOCS/
	git clone git@github.com:Genomicsplc/variantkey.git ./target/gh-pages
	cd target/gh-pages && git checkout gh-pages
	mv -f ./target/gh-pages/.git ./target/DOCS/
	rm -rf ./target/gh-pages
	cd ./target/DOCS/ && \
	git add . -A && \
	git commit -m 'Update documentation' && \
	git push origin gh-pages --force