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utils.py
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import numpy as np
import torch
import os
import random
import bisect
import histogram
from tqdm import tqdm
class EarlyStopMonitor(object):
def __init__(self, max_round=15, higher_better=True, tolerance=1e-3):
self.max_round = max_round
self.num_round = 0
self.epoch_count = 0
self.best_epoch = 0
self.last_best = None
self.higher_better = higher_better
self.tolerance = tolerance
def early_stop_check(self, curr_val):
self.epoch_count += 1
if not self.higher_better:
curr_val *= -1
if self.last_best is None:
self.last_best = curr_val
elif (curr_val - self.last_best) / np.abs(self.last_best) > self.tolerance:
self.last_best = curr_val
self.num_round = 0
self.best_epoch = self.epoch_count
else:
self.num_round += 1
return self.num_round >= self.max_round
def roc_auc_score_me(y_true, y_score, multi_class='ovo'):
a = [roc_auc_score(y_true, y_score, multi_class='ovo')]
if len(y_true.shape) > 1:
pass
else:
nb_classes = max(y_true) + 1
one_hot_targets = np.eye(nb_classes)[y_true]
for i in range(len(y_score[0])):
a.append(roc_auc_score(one_hot_targets[:,i], y_score[:,i], average='weighted'))
return a
# preprocess dataset
def preprocess_dataset(ts_list, src_list, dst_list, node_max, edge_idx_list, label_list, time_window_factor=0.05, time_start_factor=0.4):
t_max = ts_list.max()
t_min = ts_list.min()
time_window = time_window_factor * (t_max - t_min)
time_start = t_min + time_start_factor * (t_max - t_min)
time_end = t_max - time_window_factor * (t_max - t_min)
edges = {} # edges dict: all the edges
edges_idx = {} # edges index dict: all the edges index, corresponding with edges
adj_list = {}
node_idx = {}
node_simplex = {}
ts_last = -1
simplex_idx = 0
simplex_ts = []
list_simplex = set()
node_first_time= {}
node2simplex = None
simplex_ts.append(ts_list[0])
print(max(label_list))
for i in tqdm(range(len(src_list))):
ts = ts_list[i]
src = src_list[i]
tgt = dst_list[i]
node_idx[src] = 1
node_idx[tgt] = 1
if (i>0) and (label_list[i] != label_list[i-1]):
simplex_ts.append(ts)
if (i>0) and (label_list[i] != label_list[i-1]):
for _i in list(list_simplex):
for _j in list(list_simplex):
for _l in list(list_simplex):
if (_i, _j, _l) in node_simplex:
continue
if len(set([_i, _j, _l])) != 3:
continue
if ((_i, _j) in edges) and (edges[(_i, _j)] <= time_end) and (node_first_time[_l] < edges[(_i, _j)]):
# assume w first appear at the same time as edge(u,v), then no previous information, no way to predict
timing = ts_list[i-1] - edges[(_i, _j)]
if (timing > 0) and (timing < time_window):
node_simplex[(_i, _j, _l)] = simplex_idx
simplex_idx += 1
list_simplex = set()
list_simplex.add(src)
list_simplex.add(tgt)
if src in node_first_time:
node_first_time[src] = min(node_first_time[src], ts)
else:
node_first_time[src] = ts
if tgt in node_first_time:
node_first_time[tgt] = min(node_first_time[tgt], ts)
else:
node_first_time[tgt] = ts
if (src, tgt) in edges:
if edges[(src, tgt)] > ts:
edges[(src, tgt)] = ts
edges_idx[(src, tgt)] = edge_idx_list[i]
else:
edges[(src, tgt)] = ts
edges_idx[(src, tgt)] = edge_idx_list[i]
if src in adj_list:
adj_list[src].append(tgt)
else:
adj_list[src] = [tgt]
# simplex, consider edge as undirected
src = dst_list[i]
tgt = src_list[i]
if (src, tgt) in edges:
if edges[(src, tgt)] > ts:
edges[(src, tgt)] = ts
edges_idx[(src, tgt)] = edge_idx_list[i]
else:
edges[(src, tgt)] = ts
edges_idx[(src, tgt)] = edge_idx_list[i]
if src in adj_list:
adj_list[src].append(tgt)
else:
adj_list[src] = [tgt]
print("node from ", min(node_idx), ' to ', max(node_idx))
print('total nodes out ', len(adj_list.keys()))
print('total nodes ', len(node_idx.keys()))
print('simplex time', len(simplex_ts))
print("close triangle", len(node_simplex.keys()))
return find_triangle_closure(ts_list, node_max, edges, adj_list, edges_idx, node_simplex, simplex_ts, node_first_time, node2simplex, time_window_factor, time_start_factor)
def find_triangle_closure(ts_list, node_max, edges, adj_list, edges_idx, node_simplex, simplex_ts, node_first_time, node2simplex, time_window_factor, time_start_factor=0.4):
positive_three_cycle = []
positive_two_cycle = []
positive_three_ffw = []
positive_two_ffw = []
negative = []
node_max = int(node_max)
t_max = ts_list.max()
t_min = ts_list.min()
time_window = time_window_factor * (t_max - t_min)
time_start = t_min + time_start_factor * (t_max - t_min)
time_end = t_max - time_window_factor * (t_max - t_min)
# close triangle
src_1_cls_tri = []
src_2_cls_tri = []
dst_cls_tri = []
ts_cls_tri_1 = []
ts_cls_tri_2 = []
ts_cls_tri_3 = []
edge_idx_cls_tri_1 = []
edge_idx_cls_tri_2 = []
edge_idx_cls_tri_3 = []
count_cls_tri = 0
# open triangle
src_1_opn_tri = [] # feed forward
src_2_opn_tri = []
dst_opn_tri = []
ts_opn_tri_1 = []
ts_opn_tri_2 = []
ts_opn_tri_3 = []
edge_idx_opn_tri_1 = []
edge_idx_opn_tri_2 = []
edge_idx_opn_tri_3 = []
count_opn_tri = 0
# wedge
src_1_wedge = []
src_2_wedge = []
dst_wedge = []
ts_wedge_1 = []
ts_wedge_2 = []
count_wedge = 0
edge_idx_wedge_1 = []
edge_idx_wedge_2 = []
# negative(only one edge between the first two nodes in three nodes)
src_1_neg = []
src_2_neg = []
dst_neg = []
ts_neg_1 = []
edge_idx_neg_1 = []
count_negative = 0 # <a,b>
set_all_node = set(adj_list.keys())
print(len(list(set_all_node)))
dict_processed_bool = {}
for k_idx, edge_i in enumerate(edges.keys()): # first edge
i = edge_i[0]
j = edge_i[1]
if not (j in adj_list): # exist second edge
continue
# second edge (j,l)
x1 = edges[edge_i]
if (x1 < time_start) or (x1 > time_end):
continue
x1_idx = edges_idx[edge_i]
"""
deal with no interaction with the third nodes
set_all_nodes - {(i, x)} - {(j,x)}
calculate the original situation (only one link between the first two nodes)
"""
if not ((i,j) in dict_processed_bool):
dict_processed_bool[(i,j)] = 1
dict_processed_bool[(j,i)] = 1
set_negative = list(set_all_node - set(adj_list[j]) - set(adj_list[i]))
for l in set_negative:
# (i,j,l)
if node_first_time[l] <= x1:
src_1_neg.append(i)
src_2_neg.append(j)
dst_neg.append(l)
ts_neg_1.append(x1)
edge_idx_neg_1.append(x1_idx)
count_negative += 1
for l in adj_list[j]:
if (l==j) or (l==i) or (node_first_time[l] >= x1):
continue
x2 = edges[(j,l)]
x2_idx = edges_idx[(j,l)]
if (x2 - x1 > time_window):
src_1_neg.append(i)
src_2_neg.append(j)
dst_neg.append(l)
ts_neg_1.append(x1)
edge_idx_neg_1.append(x1_idx)
count_negative += 1
continue
if (x1 > x2) or (x1 == x2 and x1_idx > x2_idx): # TODO: x1 >= x2
continue
l3 = 0
if (l,i) in edges:
x3 = edges[(l,i)]
x3_idx = edges_idx[(l,i)]
if x3 - x1 > time_window:
src_1_neg.append(i)
src_2_neg.append(j)
dst_neg.append(l)
ts_neg_1.append(x1)
edge_idx_neg_1.append(x1_idx)
count_negative += 1
continue
if ((x3 > x2) or (x3 == x2 and x3_idx > x2_idx)) and (x3 - x1 < time_window) and (x3 - x1 > 0): #TODO: x3 > x2
l3 = 1
l1 = (i, j, l) in node_simplex
if l1:
_ts = simplex_ts[node_simplex[(i, j, l)]]
# (i,j,l)
src_1_cls_tri.append(i)
src_2_cls_tri.append(j)
dst_cls_tri.append(l)
ts_cls_tri_1.append(x1)
ts_cls_tri_2.append(_ts) # changed
ts_cls_tri_3.append(_ts) # changed
edge_idx_cls_tri_1.append(x1_idx)
edge_idx_cls_tri_2.append(x2_idx)
edge_idx_cls_tri_3.append(x3_idx)
# total positive cycle
count_cls_tri += 1
elif l3 == 1: # Triangle
src_1_opn_tri.append(i)
src_2_opn_tri.append(j)
dst_opn_tri.append(l)
ts_opn_tri_1.append(x1)
ts_opn_tri_2.append(x2)
ts_opn_tri_3.append(x3)
edge_idx_opn_tri_1.append(x1_idx)
edge_idx_opn_tri_2.append(x2_idx)
edge_idx_opn_tri_3.append(x3_idx)
# total positive cycle
count_opn_tri += 1
elif l3 == 0: # Wedge
if (x2 - x1 > 0) and (x2 - x1 < time_window):
src_1_wedge.append(i)
src_2_wedge.append(j)
dst_wedge.append(l)
ts_wedge_1.append(x1)
ts_wedge_2.append(x2)
edge_idx_wedge_1.append(x1_idx)
edge_idx_wedge_2.append(x2_idx)
count_wedge += 1
cls_tri = [np.array(src_1_cls_tri), np.array(src_2_cls_tri), np.array(dst_cls_tri), np.array(ts_cls_tri_1), np.array(ts_cls_tri_2), np.array(ts_cls_tri_3), np.array(edge_idx_cls_tri_1), np.array(edge_idx_cls_tri_2), np.array(edge_idx_cls_tri_3)]
opn_tri = [np.array(src_1_opn_tri), np.array(src_2_opn_tri), np.array(dst_opn_tri), np.array(ts_opn_tri_1), np.array(ts_opn_tri_2), np.array(ts_opn_tri_3), np.array(edge_idx_opn_tri_1), np.array(edge_idx_opn_tri_2), np.array(edge_idx_opn_tri_3)]
wedge = [np.array(src_1_wedge), np.array(src_2_wedge), np.array(dst_wedge), np.array(ts_wedge_1), np.array(ts_wedge_2), np.array(edge_idx_wedge_1), np.array(edge_idx_wedge_2)]
nega = [np.array(src_1_neg), np.array(src_2_neg), np.array(dst_neg), np.array(ts_neg_1), np.array(edge_idx_neg_1)]
print("Total sample number: Cls Tri: ", count_cls_tri, "Opn Tri: ", count_opn_tri, "Wedge: ", count_wedge, "Neg: ", count_negative)
return cls_tri, opn_tri, wedge, nega, set_all_node
class TripletSampler(object):
def __init__(self, cls_tri, opn_tri, wedge, nega, ts_start, ts_train, ts_val, ts_end, set_all_nodes, DATA, interpretation_type=0, time_prediction_type=0, ablation_type=0):
"""
This is the data loader.
In each epoch, it will be re-initialized, since the scale of different samples are too different.
In each epoch, we fix the size to the size of cls_tri, since it is usually the smallest.
For cls_tri, since we have the constraint that the edge idx is increasing, we need to manually do a permutation.
For cls_tri and opn_tri, we have src1, src2, dst, ts1, ts2, ts3, edge_idx1, edge_idx2, edge_idx3
For
"""
self.DATA = DATA
self.interpretation_type = interpretation_type
self.time_prediction_type = time_prediction_type
self.ablation_type = ablation_type
if self.interpretation_type > 0:
self.num_class = 2
elif self.time_prediction_type > 0:
self.num_class = 1
elif self.ablation_type > 0:
self.num_class = 2
else:
self.num_class = 4
self.set_all_nodes = set_all_nodes
# unpack data
self.src_1_cls_tri, self.src_2_cls_tri, self.dst_cls_tri, self.ts_cls_tri_1, self.ts_cls_tri_2, self.ts_cls_tri_3, self.edge_idx_cls_tri_1, self.edge_idx_cls_tri_2, self.edge_idx_cls_tri_3 = cls_tri
self.src_1_opn_tri, self.src_2_opn_tri, self.dst_opn_tri, self.ts_opn_tri_1, self.ts_opn_tri_2, self.ts_opn_tri_3, self.edge_idx_opn_tri_1, self.edge_idx_opn_tri_2, self.edge_idx_opn_tri_3 = opn_tri
self.src_1_wedge, self.src_2_wedge, self.dst_wedge, self.ts_wedge_1, self.ts_wedge_2, self.edge_idx_wedge_1, self.edge_idx_wedge_2 = wedge
self.src_1_neg, self.src_2_neg, self.dst_neg, self.ts_neg_1, self.edge_idx_neg_1 = nega
self.train_cls_tri_idx = (self.ts_cls_tri_1 > ts_start) * (self.ts_cls_tri_1 <= ts_train)
self.val_cls_tri_idx = (self.ts_cls_tri_1 > ts_train) * (self.ts_cls_tri_1 <= ts_val)
self.test_cls_tri_idx = (self.ts_cls_tri_1 > ts_val) * (self.ts_cls_tri_1 <= ts_end)
self.train_opn_tri_idx = (self.ts_opn_tri_1 > ts_start) * (self.ts_opn_tri_1 <= ts_train)
self.val_opn_tri_idx = (self.ts_opn_tri_1 > ts_train) * (self.ts_opn_tri_1 <= ts_val)
self.test_opn_tri_idx = (self.ts_opn_tri_1 > ts_val) * (self.ts_opn_tri_1 <= ts_end)
self.train_wedge_idx = (self.ts_wedge_1 > ts_start) * (self.ts_wedge_1 <= ts_train)
self.val_wedge_idx = (self.ts_wedge_1 > ts_train) * (self.ts_wedge_1 <= ts_val)
self.test_wedge_idx = (self.ts_wedge_1 > ts_val) * (self.ts_wedge_1 <= ts_end)
self.train_neg_idx = (self.ts_neg_1 > ts_start) * (self.ts_neg_1 <= ts_train)
self.val_neg_idx = (self.ts_neg_1 > ts_train) * (self.ts_neg_1 <= ts_val)
self.test_neg_idx = (self.ts_neg_1 > ts_val) * (self.ts_neg_1 <= ts_end)
self.train_src_1_cls_tri, self.train_src_2_cls_tri, self.train_dst_cls_tri, self.train_ts_cls_tri, self.train_edge_idx_cls_tri, self.train_endtime_cls_tri = self.choose_idx(self.src_1_cls_tri, self.src_2_cls_tri, self.dst_cls_tri, self.ts_cls_tri_1, self.edge_idx_cls_tri_1, self.ts_cls_tri_3, self.train_cls_tri_idx)
self.val_src_1_cls_tri, self.val_src_2_cls_tri, self.val_dst_cls_tri, self.val_ts_cls_tri, self.val_edge_idx_cls_tri, self.val_endtime_cls_tri = self.choose_idx(self.src_1_cls_tri, self.src_2_cls_tri, self.dst_cls_tri, self.ts_cls_tri_1, self.edge_idx_cls_tri_1, self.ts_cls_tri_3, self.val_cls_tri_idx)
self.test_src_1_cls_tri, self.test_src_2_cls_tri, self.test_dst_cls_tri, self.test_ts_cls_tri, self.test_edge_idx_cls_tri, self.test_endtime_cls_tri = self.choose_idx(self.src_1_cls_tri, self.src_2_cls_tri, self.dst_cls_tri, self.ts_cls_tri_1, self.edge_idx_cls_tri_1, self.ts_cls_tri_3, self.test_cls_tri_idx)
self.train_src_1_opn_tri, self.train_src_2_opn_tri, self.train_dst_opn_tri, self.train_ts_opn_tri, self.train_edge_idx_opn_tri, self.train_endtime_opn_tri = self.choose_idx(self.src_1_opn_tri, self.src_2_opn_tri, self.dst_opn_tri, self.ts_opn_tri_1, self.edge_idx_opn_tri_1, self.ts_opn_tri_3, self.train_opn_tri_idx)
self.val_src_1_opn_tri, self.val_src_2_opn_tri, self.val_dst_opn_tri, self.val_ts_opn_tri, self.val_edge_idx_opn_tri, self.val_endtime_opn_tri = self.choose_idx(self.src_1_opn_tri, self.src_2_opn_tri, self.dst_opn_tri, self.ts_opn_tri_1, self.edge_idx_opn_tri_1, self.ts_opn_tri_3, self.val_opn_tri_idx)
self.test_src_1_opn_tri, self.test_src_2_opn_tri, self.test_dst_opn_tri, self.test_ts_opn_tri, self.test_edge_idx_opn_tri, self.test_endtime_opn_tri = self.choose_idx(self.src_1_opn_tri, self.src_2_opn_tri, self.dst_opn_tri, self.ts_opn_tri_1, self.edge_idx_opn_tri_1, self.ts_opn_tri_3, self.test_opn_tri_idx)
self.train_src_1_wedge, self.train_src_2_wedge, self.train_dst_wedge, self.train_ts_wedge, self.train_edge_idx_wedge, self.train_endtime_wedge = self.choose_idx(self.src_1_wedge, self.src_2_wedge, self.dst_wedge, self.ts_wedge_1, self.edge_idx_wedge_1, self.ts_wedge_2, self.train_wedge_idx)
self.val_src_1_wedge, self.val_src_2_wedge, self.val_dst_wedge, self.val_ts_wedge, self.val_edge_idx_wedge, self.val_endtime_wedge = self.choose_idx(self.src_1_wedge, self.src_2_wedge, self.dst_wedge, self.ts_wedge_1, self.edge_idx_wedge_1, self.ts_wedge_2, self.val_wedge_idx)
self.test_src_1_wedge, self.test_src_2_wedge, self.test_dst_wedge, self.test_ts_wedge, self.test_edge_idx_wedge, self.test_endtime_wedge = self.choose_idx(self.src_1_wedge, self.src_2_wedge, self.dst_wedge, self.ts_wedge_1, self.edge_idx_wedge_1, self.ts_wedge_2, self.test_wedge_idx)
self.train_src_1_neg, self.train_src_2_neg, self.train_dst_neg, self.train_ts_neg, self.train_edge_idx_neg, _ = self.choose_idx(self.src_1_neg, self.src_2_neg, self.dst_neg, self.ts_neg_1, self.edge_idx_neg_1, self.ts_neg_1, self.train_neg_idx)
self.val_src_1_neg, self.val_src_2_neg, self.val_dst_neg, self.val_ts_neg, self.val_edge_idx_neg, _ = self.choose_idx(self.src_1_neg, self.src_2_neg, self.dst_neg, self.ts_neg_1, self.edge_idx_neg_1, self.ts_neg_1, self.val_neg_idx)
self.test_src_1_neg, self.test_src_2_neg, self.test_dst_neg, self.test_ts_neg, self.test_edge_idx_neg, _ = self.choose_idx(self.src_1_neg, self.src_2_neg, self.dst_neg, self.ts_neg_1, self.edge_idx_neg_1, self.ts_neg_1, self.test_neg_idx)
print('ts start ',ts_start, 'ts train ',ts_train, 'ts val ', ts_val, 'ts end ', ts_end)
print("finish permutation")
self.size = min(len(self.train_ts_cls_tri), len(self.train_ts_opn_tri), len(self.train_ts_wedge), len(self.train_ts_neg))
self.size_val = min(len(self.val_ts_cls_tri), len(self.val_ts_opn_tri), len(self.val_ts_wedge), len(self.val_ts_neg))
self.size_test = min(len(self.test_ts_cls_tri), len(self.test_ts_opn_tri), len(self.test_ts_wedge), len(self.test_ts_neg))
upper_limit_train = 30000
if self.size > upper_limit_train:
self.size = upper_limit_train
print("upper limit for training", upper_limit_train)
upper_limit_test_val = 6000
if self.size_val > upper_limit_test_val:
self.size_val = upper_limit_test_val
print("upper limit for val", upper_limit_test_val)
if self.size_test > upper_limit_test_val:
self.size_test = upper_limit_test_val
print("upper limit for testing", upper_limit_test_val)
if (self.interpretation_type == 1) or (self.interpretation_type == 2) or (self.interpretation_type == 3) or (self.interpretation_type == 4) or (self.ablation_type == 1):
self.train_label_t = np.concatenate((np.zeros(self.size), np.ones(self.size)))
self.val_label = np.concatenate((np.zeros(self.size_val), np.ones(self.size_val)))
self.test_label = np.concatenate((np.zeros(self.size_test), np.ones(self.size_test)))
self.train_idx_list = np.arange(self.get_size())
self.val_idx_list = np.arange(self.get_val_size())
self.test_idx_list = np.arange(self.get_test_size())
else:
self.train_label_t = np.concatenate((np.zeros(self.size), np.ones(self.size) * 1, np.ones(self.size) * 2, np.ones(self.size) * 3))
self.val_label = np.concatenate((np.zeros(self.size_val), np.ones(self.size_val), np.ones(self.size_val) * 2, np.ones(self.size_val) * 3))
self.test_label = np.concatenate((np.zeros(self.size_test), np.ones(self.size_test), np.ones(self.size_test) * 2, np.ones(self.size_test) * 3))
self.train_idx_list = np.arange(self.get_size())
self.val_idx_list = np.arange(self.get_val_size())
self.test_idx_list = np.arange(self.get_test_size())
self.initialize()
self.initialize_val()
self.initialize_test()
self.val_samples_num = len(self.val_src_1)
self.test_samples_num = len(self.test_src_1)
print("finish dataset")
def choose_idx(self, a,b,c,d,e,f, idx):
return a[idx], b[idx], c[idx], d[idx], e[idx], f[idx]
def initialize(self):
if self.interpretation_type > 0:
if self.interpretation_type == 1:
cls_tri_idx_epoch = np.random.choice(len(self.train_src_1_cls_tri), self.size, replace=False)
opn_tri_idx_epoch = np.random.choice(len(self.train_src_1_opn_tri), self.size, replace=False)
self.train_src_1 = np.concatenate((self.train_src_1_cls_tri[cls_tri_idx_epoch], self.train_src_1_opn_tri[opn_tri_idx_epoch]))
self.train_src_2 = np.concatenate((self.train_src_2_cls_tri[cls_tri_idx_epoch], self.train_src_2_opn_tri[opn_tri_idx_epoch]))
self.train_dst = np.concatenate((self.train_dst_cls_tri[cls_tri_idx_epoch], self.train_dst_opn_tri[opn_tri_idx_epoch]))
self.train_ts = np.concatenate((self.train_ts_cls_tri[cls_tri_idx_epoch], self.train_ts_opn_tri[opn_tri_idx_epoch]))
self.train_idx = np.concatenate((self.train_edge_idx_cls_tri[cls_tri_idx_epoch], self.train_edge_idx_opn_tri[opn_tri_idx_epoch]))
elif self.interpretation_type == 2:
cls_tri_idx_epoch = np.random.choice(len(self.train_src_1_cls_tri), int(self.size / 2), replace=False)
opn_tri_idx_epoch = np.random.choice(len(self.train_src_1_opn_tri), self.size - int(self.size / 2), replace=False)
wedge_idx_epoch = np.random.choice(len(self.train_src_1_wedge), self.size, replace=False)
self.train_src_1 = np.concatenate((self.train_src_1_cls_tri[cls_tri_idx_epoch], self.train_src_1_opn_tri[opn_tri_idx_epoch], self.train_src_1_wedge[wedge_idx_epoch]))
self.train_src_2 = np.concatenate((self.train_src_2_cls_tri[cls_tri_idx_epoch], self.train_src_2_opn_tri[opn_tri_idx_epoch], self.train_src_2_wedge[wedge_idx_epoch]))
self.train_dst = np.concatenate((self.train_dst_cls_tri[cls_tri_idx_epoch], self.train_dst_opn_tri[opn_tri_idx_epoch], self.train_dst_wedge[wedge_idx_epoch]))
self.train_ts = np.concatenate((self.train_ts_cls_tri[cls_tri_idx_epoch], self.train_ts_opn_tri[opn_tri_idx_epoch], self.train_ts_wedge[wedge_idx_epoch]))
self.train_idx = np.concatenate((self.train_edge_idx_cls_tri[cls_tri_idx_epoch], self.train_edge_idx_opn_tri[opn_tri_idx_epoch], self.train_edge_idx_wedge[wedge_idx_epoch]))
elif self.interpretation_type == 3:
wedge_idx_epoch = np.random.choice(len(self.train_src_1_wedge), self.size, replace=False)
nega_idx_epoch = np.random.choice(len(self.train_src_1_neg), self.size, replace=False)
self.train_src_1 = np.concatenate((self.train_src_1_wedge[wedge_idx_epoch], self.train_src_1_neg[nega_idx_epoch]))
self.train_src_2 = np.concatenate((self.train_src_2_wedge[wedge_idx_epoch], self.train_src_2_neg[nega_idx_epoch]))
self.train_dst = np.concatenate((self.train_dst_wedge[wedge_idx_epoch], self.train_dst_neg[nega_idx_epoch]))
self.train_ts = np.concatenate((self.train_ts_wedge[wedge_idx_epoch], self.train_ts_neg[nega_idx_epoch]))
self.train_idx = np.concatenate((self.train_edge_idx_wedge[wedge_idx_epoch], self.train_edge_idx_neg[nega_idx_epoch]))
elif self.interpretation_type == 4:
cls_tri_idx_epoch = np.random.choice(len(self.train_src_1_cls_tri), self.size, replace=False)
wedge_idx_epoch = np.random.choice(len(self.train_src_1_wedge), self.size, replace=False)
self.train_src_1 = np.concatenate((self.train_src_1_cls_tri[cls_tri_idx_epoch], self.train_src_1_wedge[wedge_idx_epoch]))
self.train_src_2 = np.concatenate((self.train_src_2_cls_tri[cls_tri_idx_epoch], self.train_src_2_wedge[wedge_idx_epoch]))
self.train_dst = np.concatenate((self.train_dst_cls_tri[cls_tri_idx_epoch], self.train_dst_wedge[wedge_idx_epoch]))
self.train_ts = np.concatenate((self.train_ts_cls_tri[cls_tri_idx_epoch], self.train_ts_wedge[wedge_idx_epoch]))
self.train_idx = np.concatenate((self.train_edge_idx_cls_tri[cls_tri_idx_epoch], self.train_edge_idx_wedge[wedge_idx_epoch]))
elif self.ablation_type == 1:
opn_tri_idx_epoch = np.random.choice(len(self.train_src_1_opn_tri), self.size, replace=False)
wedge_idx_epoch = np.random.choice(len(self.train_src_1_wedge), self.size, replace=False)
self.train_src_1 = np.concatenate((self.train_src_1_opn_tri[opn_tri_idx_epoch], self.train_src_1_wedge[wedge_idx_epoch]))
self.train_src_2 = np.concatenate((self.train_src_2_opn_tri[opn_tri_idx_epoch], self.train_src_2_wedge[wedge_idx_epoch]))
self.train_dst = np.concatenate((self.train_dst_opn_tri[opn_tri_idx_epoch], self.train_dst_wedge[wedge_idx_epoch]))
self.train_ts = np.concatenate((self.train_ts_opn_tri[opn_tri_idx_epoch], self.train_ts_wedge[wedge_idx_epoch]))
self.train_idx = np.concatenate((self.train_edge_idx_opn_tri[opn_tri_idx_epoch], self.train_edge_idx_wedge[wedge_idx_epoch]))
elif self.time_prediction_type > 0:
if self.time_prediction_type == 1:
cls_tri_idx_epoch = np.random.choice(len(self.train_src_1_cls_tri), self.size, replace=False)
self.train_src_1 = self.train_src_1_cls_tri[cls_tri_idx_epoch]
self.train_src_2 = self.train_src_2_cls_tri[cls_tri_idx_epoch]
self.train_dst = self.train_dst_cls_tri[cls_tri_idx_epoch]
self.train_ts = self.train_ts_cls_tri[cls_tri_idx_epoch]
self.train_idx = self.train_edge_idx_cls_tri[cls_tri_idx_epoch]
self.train_time_gt = np.float32(self.train_endtime_cls_tri[cls_tri_idx_epoch] - self.train_ts_cls_tri[cls_tri_idx_epoch])
elif self.time_prediction_type == 2:
opn_tri_idx_epoch = np.random.choice(len(self.train_src_1_opn_tri), self.size, replace=False)
self.train_src_1 = self.train_src_1_opn_tri[opn_tri_idx_epoch]
self.train_src_2 = self.train_src_2_opn_tri[opn_tri_idx_epoch]
self.train_dst = self.train_dst_opn_tri[opn_tri_idx_epoch]
self.train_ts = self.train_ts_opn_tri[opn_tri_idx_epoch]
self.train_idx = self.train_edge_idx_opn_tri[opn_tri_idx_epoch]
self.train_time_gt = np.float32(self.train_endtime_opn_tri[opn_tri_idx_epoch] - self.train_ts_opn_tri[opn_tri_idx_epoch])
elif self.time_prediction_type == 3:
wedge_idx_epoch = np.random.choice(len(self.train_src_1_wedge), self.size, replace=False)
self.train_src_1 = self.train_src_1_wedge[wedge_idx_epoch]
self.train_src_2 = self.train_src_2_wedge[wedge_idx_epoch]
self.train_dst = self.train_dst_wedge[wedge_idx_epoch]
self.train_ts = self.train_ts_wedge[wedge_idx_epoch]
self.train_idx = self.train_edge_idx_wedge[wedge_idx_epoch]
self.train_time_gt = np.float32(self.train_endtime_wedge[wedge_idx_epoch] - self.train_ts_wedge[wedge_idx_epoch])
else:
cls_tri_idx_epoch = np.random.choice(len(self.train_src_1_cls_tri), self.size, replace=False)
opn_tri_idx_epoch = np.random.choice(len(self.train_src_1_opn_tri), self.size, replace=False)
wedge_idx_epoch = np.random.choice(len(self.train_src_1_wedge), self.size, replace=False)
nega_idx_epoch = np.random.choice(len(self.train_src_1_neg), self.size, replace=False)
self.train_src_1 = np.concatenate((self.train_src_1_cls_tri[cls_tri_idx_epoch], self.train_src_1_opn_tri[opn_tri_idx_epoch], self.train_src_1_wedge[wedge_idx_epoch], self.train_src_1_neg[nega_idx_epoch]))
self.train_src_2 = np.concatenate((self.train_src_2_cls_tri[cls_tri_idx_epoch], self.train_src_2_opn_tri[opn_tri_idx_epoch], self.train_src_2_wedge[wedge_idx_epoch], self.train_src_2_neg[nega_idx_epoch]))
self.train_dst = np.concatenate((self.train_dst_cls_tri[cls_tri_idx_epoch], self.train_dst_opn_tri[opn_tri_idx_epoch], self.train_dst_wedge[wedge_idx_epoch], self.train_dst_neg[nega_idx_epoch]))
self.train_ts = np.concatenate((self.train_ts_cls_tri[cls_tri_idx_epoch], self.train_ts_opn_tri[opn_tri_idx_epoch], self.train_ts_wedge[wedge_idx_epoch], self.train_ts_neg[nega_idx_epoch]))
self.train_idx = np.concatenate((self.train_edge_idx_cls_tri[cls_tri_idx_epoch], self.train_edge_idx_opn_tri[opn_tri_idx_epoch], self.train_edge_idx_wedge[wedge_idx_epoch], self.train_edge_idx_neg[nega_idx_epoch]))
self.idx = 0
np.random.shuffle(self.train_idx_list)
def initialize_val(self):
if self.interpretation_type > 0:
if self.interpretation_type == 1:
cls_tri_idx_epoch = np.random.choice(len(self.val_src_1_cls_tri), self.size_val, replace=False)
opn_tri_idx_epoch = np.random.choice(len(self.val_src_1_opn_tri), self.size_val, replace=False)
self.val_src_1 = np.concatenate((self.val_src_1_cls_tri[cls_tri_idx_epoch], self.val_src_1_opn_tri[opn_tri_idx_epoch]))
self.val_src_2 = np.concatenate((self.val_src_2_cls_tri[cls_tri_idx_epoch], self.val_src_2_opn_tri[opn_tri_idx_epoch]))
self.val_dst = np.concatenate((self.val_dst_cls_tri[cls_tri_idx_epoch], self.val_dst_opn_tri[opn_tri_idx_epoch]))
self.val_ts = np.concatenate((self.val_ts_cls_tri[cls_tri_idx_epoch], self.val_ts_opn_tri[opn_tri_idx_epoch]))
self.val_idx = np.concatenate((self.val_edge_idx_cls_tri[cls_tri_idx_epoch], self.val_edge_idx_opn_tri[opn_tri_idx_epoch]))
elif self.interpretation_type == 2:
cls_tri_idx_epoch = np.random.choice(len(self.val_src_1_cls_tri), int(self.size_val / 2), replace=False)
opn_tri_idx_epoch = np.random.choice(len(self.val_src_1_opn_tri), self.size_val - int(self.size_val / 2), replace=False)
wedge_idx_epoch = np.random.choice(len(self.val_src_1_wedge), self.size_val, replace=False)
self.val_src_1 = np.concatenate((self.val_src_1_cls_tri[cls_tri_idx_epoch], self.val_src_1_opn_tri[opn_tri_idx_epoch], self.val_src_1_wedge[wedge_idx_epoch]))
self.val_src_2 = np.concatenate((self.val_src_2_cls_tri[cls_tri_idx_epoch], self.val_src_2_opn_tri[opn_tri_idx_epoch], self.val_src_2_wedge[wedge_idx_epoch]))
self.val_dst = np.concatenate((self.val_dst_cls_tri[cls_tri_idx_epoch], self.val_dst_opn_tri[opn_tri_idx_epoch], self.val_dst_wedge[wedge_idx_epoch]))
self.val_ts = np.concatenate((self.val_ts_cls_tri[cls_tri_idx_epoch], self.val_ts_opn_tri[opn_tri_idx_epoch], self.val_ts_wedge[wedge_idx_epoch]))
self.val_idx = np.concatenate((self.val_edge_idx_cls_tri[cls_tri_idx_epoch], self.val_edge_idx_opn_tri[opn_tri_idx_epoch], self.val_edge_idx_wedge[wedge_idx_epoch]))
elif self.interpretation_type == 3:
wedge_idx_epoch = np.random.choice(len(self.val_src_1_wedge), self.size_val, replace=False)
nega_idx_epoch = np.random.choice(len(self.val_src_1_neg), self.size_val, replace=False)
self.val_src_1 = np.concatenate((self.val_src_1_wedge[wedge_idx_epoch], self.val_src_1_neg[nega_idx_epoch]))
self.val_src_2 = np.concatenate((self.val_src_2_wedge[wedge_idx_epoch], self.val_src_2_neg[nega_idx_epoch]))
self.val_dst = np.concatenate((self.val_dst_wedge[wedge_idx_epoch], self.val_dst_neg[nega_idx_epoch]))
self.val_ts = np.concatenate((self.val_ts_wedge[wedge_idx_epoch], self.val_ts_neg[nega_idx_epoch]))
self.val_idx = np.concatenate((self.val_edge_idx_wedge[wedge_idx_epoch], self.val_edge_idx_neg[nega_idx_epoch]))
elif self.interpretation_type == 4:
cls_tri_idx_epoch = np.random.choice(len(self.val_src_1_cls_tri), self.size_val, replace=False)
wedge_idx_epoch = np.random.choice(len(self.val_src_1_wedge), self.size_val, replace=False)
self.val_src_1 = np.concatenate((self.val_src_1_cls_tri[cls_tri_idx_epoch], self.val_src_1_wedge[wedge_idx_epoch]))
self.val_src_2 = np.concatenate((self.val_src_2_cls_tri[cls_tri_idx_epoch], self.val_src_2_wedge[wedge_idx_epoch]))
self.val_dst = np.concatenate((self.val_dst_cls_tri[cls_tri_idx_epoch], self.val_dst_wedge[wedge_idx_epoch]))
self.val_ts = np.concatenate((self.val_ts_cls_tri[cls_tri_idx_epoch], self.val_ts_wedge[wedge_idx_epoch]))
self.val_idx = np.concatenate((self.val_edge_idx_cls_tri[cls_tri_idx_epoch], self.val_edge_idx_wedge[wedge_idx_epoch]))
elif self.ablation_type == 1: #abla
opn_tri_idx_epoch = np.random.choice(len(self.val_src_1_opn_tri), self.size_val, replace=False)
wedge_idx_epoch = np.random.choice(len(self.val_src_1_wedge), self.size_val, replace=False)
self.val_src_1 = np.concatenate((self.val_src_1_opn_tri[opn_tri_idx_epoch], self.val_src_1_wedge[wedge_idx_epoch]))
self.val_src_2 = np.concatenate((self.val_src_2_opn_tri[opn_tri_idx_epoch], self.val_src_2_wedge[wedge_idx_epoch]))
self.val_dst = np.concatenate((self.val_dst_opn_tri[opn_tri_idx_epoch], self.val_dst_wedge[wedge_idx_epoch]))
self.val_ts = np.concatenate((self.val_ts_opn_tri[opn_tri_idx_epoch], self.val_ts_wedge[wedge_idx_epoch]))
self.val_idx = np.concatenate((self.val_edge_idx_opn_tri[opn_tri_idx_epoch], self.val_edge_idx_wedge[wedge_idx_epoch]))
elif self.time_prediction_type > 0:
if self.time_prediction_type == 1:
cls_tri_idx_epoch = np.random.choice(len(self.val_src_1_cls_tri), self.size_val, replace=False)
self.val_src_1 = self.val_src_1_cls_tri[cls_tri_idx_epoch]
self.val_src_2 = self.val_src_2_cls_tri[cls_tri_idx_epoch]
self.val_dst = self.val_dst_cls_tri[cls_tri_idx_epoch]
self.val_ts = self.val_ts_cls_tri[cls_tri_idx_epoch]
self.val_idx = self.val_edge_idx_cls_tri[cls_tri_idx_epoch]
self.val_time_gt = np.float32(self.val_endtime_cls_tri[cls_tri_idx_epoch] - self.val_ts_cls_tri[cls_tri_idx_epoch])
elif self.time_prediction_type == 2:
opn_tri_idx_epoch = np.random.choice(len(self.val_src_1_opn_tri), self.size_val, replace=False)
self.val_src_1 = self.val_src_1_opn_tri[opn_tri_idx_epoch]
self.val_src_2 = self.val_src_2_opn_tri[opn_tri_idx_epoch]
self.val_dst = self.val_dst_opn_tri[opn_tri_idx_epoch]
self.val_ts = self.val_ts_opn_tri[opn_tri_idx_epoch]
self.val_idx = self.val_edge_idx_opn_tri[opn_tri_idx_epoch]
self.val_time_gt = np.float32(self.val_endtime_opn_tri[opn_tri_idx_epoch] - self.val_ts_opn_tri[opn_tri_idx_epoch])
elif self.time_prediction_type == 3:
wedge_idx_epoch = np.random.choice(len(self.val_src_1_wedge), self.size_val, replace=False)
self.val_src_1 = self.val_src_1_wedge[wedge_idx_epoch]
self.val_src_2 = self.val_src_2_wedge[wedge_idx_epoch]
self.val_dst = self.val_dst_wedge[wedge_idx_epoch]
self.val_ts = self.val_ts_wedge[wedge_idx_epoch]
self.val_idx = self.val_edge_idx_wedge[wedge_idx_epoch]
self.val_time_gt = np.float32(self.val_endtime_wedge[wedge_idx_epoch] - self.val_ts_wedge[wedge_idx_epoch])
else:
cls_tri_idx_epoch = np.random.choice(len(self.val_src_1_cls_tri), self.size_val, replace=False)
opn_tri_idx_epoch = np.random.choice(len(self.val_src_1_opn_tri), self.size_val, replace=False)
wedge_idx_epoch = np.random.choice(len(self.val_src_1_wedge), self.size_val, replace=False)
nega_idx_epoch = np.random.choice(len(self.val_src_1_neg), self.size_val, replace=False)
self.val_src_1 = np.concatenate((self.val_src_1_cls_tri[cls_tri_idx_epoch], self.val_src_1_opn_tri[opn_tri_idx_epoch], self.val_src_1_wedge[wedge_idx_epoch], self.val_src_1_neg[nega_idx_epoch]))
self.val_src_2 = np.concatenate((self.val_src_2_cls_tri[cls_tri_idx_epoch], self.val_src_2_opn_tri[opn_tri_idx_epoch], self.val_src_2_wedge[wedge_idx_epoch], self.val_src_2_neg[nega_idx_epoch]))
self.val_dst = np.concatenate((self.val_dst_cls_tri[cls_tri_idx_epoch], self.val_dst_opn_tri[opn_tri_idx_epoch], self.val_dst_wedge[wedge_idx_epoch], self.val_dst_neg[nega_idx_epoch]))
self.val_ts = np.concatenate((self.val_ts_cls_tri[cls_tri_idx_epoch], self.val_ts_opn_tri[opn_tri_idx_epoch], self.val_ts_wedge[wedge_idx_epoch], self.val_ts_neg[nega_idx_epoch]))
self.val_idx = np.concatenate((self.val_edge_idx_cls_tri[cls_tri_idx_epoch], self.val_edge_idx_opn_tri[opn_tri_idx_epoch], self.val_edge_idx_wedge[wedge_idx_epoch], self.val_edge_idx_neg[nega_idx_epoch]))
self.idx = 0
np.random.shuffle(self.val_idx_list)
def initialize_test(self):
if self.interpretation_type > 0:
if self.interpretation_type == 1:
cls_tri_idx_epoch = np.random.choice(len(self.test_src_1_cls_tri), self.size_test, replace=False)
opn_tri_idx_epoch = np.random.choice(len(self.test_src_1_opn_tri), self.size_test, replace=False)
self.test_src_1 = np.concatenate((self.test_src_1_cls_tri[cls_tri_idx_epoch], self.test_src_1_opn_tri[opn_tri_idx_epoch]))
self.test_src_2 = np.concatenate((self.test_src_2_cls_tri[cls_tri_idx_epoch], self.test_src_2_opn_tri[opn_tri_idx_epoch]))
self.test_dst = np.concatenate((self.test_dst_cls_tri[cls_tri_idx_epoch], self.test_dst_opn_tri[opn_tri_idx_epoch]))
self.test_ts = np.concatenate((self.test_ts_cls_tri[cls_tri_idx_epoch], self.test_ts_opn_tri[opn_tri_idx_epoch]))
self.test_idx = np.concatenate((self.test_edge_idx_cls_tri[cls_tri_idx_epoch], self.test_edge_idx_opn_tri[opn_tri_idx_epoch]))
elif self.interpretation_type == 2:
cls_tri_idx_epoch = np.random.choice(len(self.test_src_1_cls_tri), int(self.size_test / 2), replace=False)
opn_tri_idx_epoch = np.random.choice(len(self.test_src_1_opn_tri), self.size_test - int(self.size_test / 2), replace=False)
wedge_idx_epoch = np.random.choice(len(self.test_src_1_wedge), self.size_test, replace=False)
self.test_src_1 = np.concatenate((self.test_src_1_cls_tri[cls_tri_idx_epoch], self.test_src_1_opn_tri[opn_tri_idx_epoch], self.test_src_1_wedge[wedge_idx_epoch]))
self.test_src_2 = np.concatenate((self.test_src_2_cls_tri[cls_tri_idx_epoch], self.test_src_2_opn_tri[opn_tri_idx_epoch], self.test_src_2_wedge[wedge_idx_epoch]))
self.test_dst = np.concatenate((self.test_dst_cls_tri[cls_tri_idx_epoch], self.test_dst_opn_tri[opn_tri_idx_epoch], self.test_dst_wedge[wedge_idx_epoch]))
self.test_ts = np.concatenate((self.test_ts_cls_tri[cls_tri_idx_epoch], self.test_ts_opn_tri[opn_tri_idx_epoch], self.test_ts_wedge[wedge_idx_epoch]))
self.test_idx = np.concatenate((self.test_edge_idx_cls_tri[cls_tri_idx_epoch], self.test_edge_idx_opn_tri[opn_tri_idx_epoch], self.test_edge_idx_wedge[wedge_idx_epoch]))
elif self.interpretation_type == 3:
wedge_idx_epoch = np.random.choice(len(self.test_src_1_wedge), self.size_test, replace=False)
nega_idx_epoch = np.random.choice(len(self.test_src_1_neg), self.size_test, replace=False)
self.test_src_1 = np.concatenate((self.test_src_1_wedge[wedge_idx_epoch], self.test_src_1_neg[nega_idx_epoch]))
self.test_src_2 = np.concatenate((self.test_src_2_wedge[wedge_idx_epoch], self.test_src_2_neg[nega_idx_epoch]))
self.test_dst = np.concatenate((self.test_dst_wedge[wedge_idx_epoch], self.test_dst_neg[nega_idx_epoch]))
self.test_ts = np.concatenate((self.test_ts_wedge[wedge_idx_epoch], self.test_ts_neg[nega_idx_epoch]))
self.test_idx = np.concatenate((self.test_edge_idx_wedge[wedge_idx_epoch], self.test_edge_idx_neg[nega_idx_epoch]))
elif self.interpretation_type == 4:
cls_tri_idx_epoch = np.random.choice(len(self.test_src_1_cls_tri), self.size_test, replace=False)
wedge_idx_epoch = np.random.choice(len(self.test_src_1_wedge), self.size_test, replace=False)
self.test_src_1 = np.concatenate((self.test_src_1_cls_tri[cls_tri_idx_epoch], self.test_src_1_wedge[wedge_idx_epoch]))
self.test_src_2 = np.concatenate((self.test_src_2_cls_tri[cls_tri_idx_epoch], self.test_src_2_wedge[wedge_idx_epoch]))
self.test_dst = np.concatenate((self.test_dst_cls_tri[cls_tri_idx_epoch], self.test_dst_wedge[wedge_idx_epoch]))
self.test_ts = np.concatenate((self.test_ts_cls_tri[cls_tri_idx_epoch], self.test_ts_wedge[wedge_idx_epoch]))
self.test_idx = np.concatenate((self.test_edge_idx_cls_tri[cls_tri_idx_epoch], self.test_edge_idx_wedge[wedge_idx_epoch]))
elif self.ablation_type == 1:
opn_tri_idx_epoch = np.random.choice(len(self.test_src_1_opn_tri), self.size_test, replace=False)
wedge_idx_epoch = np.random.choice(len(self.test_src_1_wedge), self.size_test, replace=False)
self.test_src_1 = np.concatenate((self.test_src_1_opn_tri[opn_tri_idx_epoch], self.test_src_1_wedge[wedge_idx_epoch]))
self.test_src_2 = np.concatenate((self.test_src_2_opn_tri[opn_tri_idx_epoch], self.test_src_2_wedge[wedge_idx_epoch]))
self.test_dst = np.concatenate((self.test_dst_opn_tri[opn_tri_idx_epoch], self.test_dst_wedge[wedge_idx_epoch]))
self.test_ts = np.concatenate((self.test_ts_opn_tri[opn_tri_idx_epoch], self.test_ts_wedge[wedge_idx_epoch]))
self.test_idx = np.concatenate((self.test_edge_idx_opn_tri[opn_tri_idx_epoch], self.test_edge_idx_wedge[wedge_idx_epoch]))
elif self.time_prediction_type > 0:
if self.time_prediction_type == 1:
cls_tri_idx_epoch = np.random.choice(len(self.test_src_1_cls_tri), self.size_test, replace=False)
self.test_src_1 = self.test_src_1_cls_tri[cls_tri_idx_epoch]
self.test_src_2 = self.test_src_2_cls_tri[cls_tri_idx_epoch]
self.test_dst = self.test_dst_cls_tri[cls_tri_idx_epoch]
self.test_ts = self.test_ts_cls_tri[cls_tri_idx_epoch]
self.test_idx = self.test_edge_idx_cls_tri[cls_tri_idx_epoch]
self.test_time_gt = np.float32(self.test_endtime_cls_tri[cls_tri_idx_epoch] - self.test_ts_cls_tri[cls_tri_idx_epoch])
elif self.time_prediction_type == 2:
opn_tri_idx_epoch = np.random.choice(len(self.test_src_1_opn_tri), self.size_test, replace=False)
self.test_src_1 = self.test_src_1_opn_tri[opn_tri_idx_epoch]
self.test_src_2 = self.test_src_2_opn_tri[opn_tri_idx_epoch]
self.test_dst = self.test_dst_opn_tri[opn_tri_idx_epoch]
self.test_ts = self.test_ts_opn_tri[opn_tri_idx_epoch]
self.test_idx = self.test_edge_idx_opn_tri[opn_tri_idx_epoch]
self.test_time_gt = np.float32(self.test_endtime_opn_tri[opn_tri_idx_epoch] - self.test_ts_opn_tri[opn_tri_idx_epoch])
elif self.time_prediction_type == 3:
wedge_idx_epoch = np.random.choice(len(self.test_src_1_wedge), self.size_test, replace=False)
self.test_src_1 = self.test_src_1_wedge[wedge_idx_epoch]
self.test_src_2 = self.test_src_2_wedge[wedge_idx_epoch]
self.test_dst = self.test_dst_wedge[wedge_idx_epoch]
self.test_ts = self.test_ts_wedge[wedge_idx_epoch]
self.test_idx = self.test_edge_idx_wedge[wedge_idx_epoch]
self.test_time_gt = np.float32(self.test_endtime_wedge[wedge_idx_epoch] - self.test_ts_wedge[wedge_idx_epoch])
else:
cls_tri_idx_epoch = np.random.choice(len(self.test_src_1_cls_tri), self.size_test, replace=False)
opn_tri_idx_epoch = np.random.choice(len(self.test_src_1_opn_tri), self.size_test, replace=False)
wedge_idx_epoch = np.random.choice(len(self.test_src_1_wedge), self.size_test, replace=False)
nega_idx_epoch = np.random.choice(len(self.test_src_1_neg), self.size_test, replace=False)
self.test_src_1 = np.concatenate((self.test_src_1_cls_tri[cls_tri_idx_epoch], self.test_src_1_opn_tri[opn_tri_idx_epoch], self.test_src_1_wedge[wedge_idx_epoch], self.test_src_1_neg[nega_idx_epoch]))
self.test_src_2 = np.concatenate((self.test_src_2_cls_tri[cls_tri_idx_epoch], self.test_src_2_opn_tri[opn_tri_idx_epoch], self.test_src_2_wedge[wedge_idx_epoch], self.test_src_2_neg[nega_idx_epoch]))
self.test_dst = np.concatenate((self.test_dst_cls_tri[cls_tri_idx_epoch], self.test_dst_opn_tri[opn_tri_idx_epoch], self.test_dst_wedge[wedge_idx_epoch], self.test_dst_neg[nega_idx_epoch]))
self.test_ts = np.concatenate((self.test_ts_cls_tri[cls_tri_idx_epoch], self.test_ts_opn_tri[opn_tri_idx_epoch], self.test_ts_wedge[wedge_idx_epoch], self.test_ts_neg[nega_idx_epoch]))
self.test_idx = np.concatenate((self.test_edge_idx_cls_tri[cls_tri_idx_epoch], self.test_edge_idx_opn_tri[opn_tri_idx_epoch], self.test_edge_idx_wedge[wedge_idx_epoch], self.test_edge_idx_neg[nega_idx_epoch]))
self.idx = 0
np.random.shuffle(self.test_idx_list)
def get_size(self):
return self.num_class * self.size
def get_val_size(self):
return self.num_class * self.size_val
def get_test_size(self):
return self.num_class * self.size_test
def set_batch_size(self, batch_size):
self.bs = batch_size
self.idx = 0
def reset(self):
self.idx = 0
def train_samples(self):
s_idx = self.idx * self.bs
e_idx = min(self.get_size(), s_idx + self.bs)
if s_idx == e_idx:
s_idx = 0
e_idx = self.bs
self.idx = 0
print("train error")
batch_idx = self.train_idx_list[s_idx:e_idx]
src_1_l_cut, src_2_l_cut, dst_l_cut, ts_l_cut, e_l_cut = self.train_src_1[batch_idx], self.train_src_2[batch_idx], self.train_dst[batch_idx], self.train_ts[batch_idx], self.train_idx[batch_idx]
if self.time_prediction_type > 0:
label_cut = self.train_time_gt[batch_idx]
else:
label_cut = self.train_label_t[batch_idx]
self.idx += 1
return src_1_l_cut, src_2_l_cut, dst_l_cut, ts_l_cut, e_l_cut, label_cut
def train_samples_baselines(self):
s_idx = self.idx * self.bs
e_idx = min(self.get_size(), s_idx + self.bs)
if s_idx == e_idx:
s_idx = 0
e_idx = self.bs
self.idx = 0
print("train error")
batch_idx = self.train_idx_list[s_idx:e_idx]
if self.time_prediction_type > 0:
label_cut = self.train_time_gt[batch_idx]
else:
label_cut = self.train_label_t[batch_idx]
self.idx += 1
return batch_idx, label_cut
def val_samples(self, bs = None):
if bs == None:
bs = self.bs
s_idx = self.idx * bs
e_idx = min(self.get_val_size(), s_idx + bs)
if s_idx == e_idx:
s_idx = 0
e_idx = bs
self.idx = 0
print("val error")
batch_idx = self.val_idx_list[s_idx:e_idx]
src_1_l_cut, src_2_l_cut, dst_l_cut, ts_l_cut, e_l_cut = self.val_src_1[batch_idx], self.val_src_2[batch_idx], self.val_dst[batch_idx], self.val_ts[batch_idx], self.val_idx[batch_idx]
if self.time_prediction_type > 0:
label_cut = self.val_time_gt[batch_idx]
else:
label_cut = self.val_label[batch_idx]
self.idx += 1
return src_1_l_cut, src_2_l_cut, dst_l_cut, ts_l_cut, e_l_cut, label_cut
def val_samples_baselines(self, bs = None):
if bs == None:
bs = self.bs
s_idx = self.idx * bs
e_idx = min(self.get_val_size(), s_idx + bs)
if s_idx == e_idx:
s_idx = 0
e_idx = bs
self.idx = 0
print("val error")
batch_idx = self.val_idx_list[s_idx:e_idx]
e_l_cut = self.val_idx[batch_idx]
if self.time_prediction_type > 0:
label_cut = self.val_time_gt[batch_idx]
else:
label_cut = self.val_label[batch_idx]
self.idx += 1
return batch_idx, label_cut
def test_samples(self, bs = None):
if bs == None:
bs = self.bs
s_idx = self.idx * bs
e_idx = min(self.get_test_size(), s_idx + bs)
if s_idx == e_idx:
s_idx = 0
e_idx = bs
self.idx = 0
print("test error")
batch_idx = self.test_idx_list[s_idx:e_idx]
src_1_l_cut, src_2_l_cut, dst_l_cut, ts_l_cut, e_l_cut = self.test_src_1[batch_idx], self.test_src_2[batch_idx], self.test_dst[batch_idx], self.test_ts[batch_idx], self.test_idx[batch_idx]
if self.time_prediction_type > 0:
label_cut = self.test_time_gt[batch_idx]
else:
label_cut = self.test_label[batch_idx]
self.idx += 1
return src_1_l_cut, src_2_l_cut, dst_l_cut, ts_l_cut, e_l_cut, label_cut
def test_samples_baselines(self, bs = None):
if bs == None:
bs = self.bs
s_idx = self.idx * bs
e_idx = min(self.get_test_size(), s_idx + bs)
if s_idx == e_idx:
s_idx = 0
e_idx = bs
self.idx = 0
print("test error")
batch_idx = self.test_idx_list[s_idx:e_idx]
e_l_cut = self.test_idx[batch_idx]
if self.time_prediction_type > 0:
label_cut = self.test_time_gt[batch_idx]
else:
label_cut = self.test_label[batch_idx]
self.idx += 1
return batch_idx, label_cut
def inter_label(self, label_cut):
"""
For interpretation, we have 3 tasks.
class 0 vs class 1
class 0 + class 1 vs class 2
class 2 and class 3
Abla:
class 1 vs class 2
return idx, label_cut
"""
if self.interpretation_type == 1:
idx = (label_cut == 0) + (label_cut == 1)
elif self.interpretation_type == 2:
idx_0 = label_cut == 0
idx_1 = label_cut == 1
idx_2 = label_cut == 2
label_cut[idx_1] = 0
label_cut[idx_2] = 1
idx = idx_0 + idx_1 + idx_2
elif self.interpretation_type == 3:
idx_2 = label_cut == 2
idx_3 = label_cut == 3
label_cut[idx_2] = 0
label_cut[idx_3] = 1
idx = idx_2 + idx_3
elif self.interpretation_type == 4:
idx_1 = label_cut == 0
idx_3 = label_cut == 2
label_cut[idx_1] = 0
label_cut[idx_3] = 1
idx = idx_1 + idx_3
elif self.ablation_type == 1:
idx_2 = label_cut == 1
idx_3 = label_cut == 2
label_cut[idx_2] = 0
label_cut[idx_3] = 1
idx = idx_2 + idx_3
else: # not interpretation
idx = np.array(np.ones_like(label_cut), dtype=bool)
return idx, label_cut
from sklearn.metrics import roc_auc_score
def roc_auc_score_multi(x, y):
return roc_auc_score(x,y,multi_class='ovo')
def roc_auc_score_single(x,y):
return roc_auc_score(x[:,1],y[:,1])
class NegTripletSampler(object):
def __init__(self, samples):
src_1_list, src_2_list, dst_list, ts_list, e_idx_list = samples
self.src_1_list = np.array(src_1_list)
self.src_2_list = np.array(src_2_list)
self.dst_list = np.array(dst_list)
self.ts_list = np.array(ts_list)
self.e_idx_list = np.array(e_idx_list)
def sample(self, size):
index = np.random.randint(0, len(self.src_1_list), size)
return self.src_1_list[index], self.src_2_list[index], self.dst_list[index], self.ts_list[index], self.e_idx_list[index]
class RandTripletSampler(object):
def __init__(self, samples):
src_1_list, src_2_list, dst_list, ts_list, e_idx_list = samples
self.src_1_list = np.concatenate(src_1_list)
self.src_2_list = np.concatenate(src_2_list)
self.dst_list = np.concatenate(dst_list)
self.ts_list = np.concatenate(ts_list)
self.e_idx_list = np.concatenate(e_idx_list)
def sample(self, size):
src_1_index = np.random.randint(0, len(self.src_1_list), size)
src_2_index = np.random.randint(0, len(self.src_2_list), size)
dst_index = np.random.randint(0, len(self.dst_list), size)
return self.src_1_list[src_1_index], self.src_2_list[src_2_index], self.dst_list[dst_index], self.ts_list[src_1_index], self.e_idx_list[src_1_index]
def set_random_seed(seed):
torch.manual_seed(seed)
torch.cuda.manual_seed_all(seed)
torch.backends.cudnn.deterministic = True
torch.backends.cudnn.benchmark = False
np.random.seed(seed)
random.seed(seed)
os.environ['PYTHONHASHSEED'] = str(seed)
def process_sampling_numbers(num_neighbors, num_layers):
num_neighbors = [int(n) for n in num_neighbors]
if len(num_neighbors) == 1:
num_neighbors = num_neighbors * num_layers
else:
num_layers = len(num_neighbors)
return num_neighbors, num_layers