From 053a4e93321458c04fc25276892c67f282f2b007 Mon Sep 17 00:00:00 2001 From: Joshua Klein Date: Fri, 20 May 2022 11:10:20 -0400 Subject: [PATCH] Fix/units (#134) * Add integer data type for library spectrum key/index --- psi-ms.obo | 10 ++++++---- 1 file changed, 6 insertions(+), 4 deletions(-) diff --git a/psi-ms.obo b/psi-ms.obo index 428c55b..70e7ed1 100644 --- a/psi-ms.obo +++ b/psi-ms.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: 4.1.88 +data-version: 4.1.89 date: 02:05:2022 11:44 saved-by: Joshua Klein auto-generated-by: OBO-Edit 2.3.1 @@ -7456,7 +7456,7 @@ is_a: MS:1001085 ! protein-level identification attribute [Term] id: MS:1001117 name: theoretical mass -def: "The theoretical mass of the molecule (e.g. the peptide sequence and its modifications)." [PSI:PI] +def: "The theoretical neutral mass of the molecule (e.g. the peptide sequence and its modifications) not including its charge carrier." [PSI:PI] xref: value-type:xsd\:double "The allowed value-type for this CV term." is_a: MS:1001105 ! peptide sequence-level identification attribute relationship: has_units UO:0000221 ! dalton @@ -21090,6 +21090,7 @@ id: MS:1003062 name: library spectrum index def: "Integer index value that indicates the spectrum's ordered position within a spectral library. By custom, index counters should begin with 0." [PSI:PI] is_a: MS:1003234 ! library spectrum attribute +relationship: has_value_type xsd\:integer ! The allowed value-type for this CV term [Term] id: MS:1003063 @@ -21242,10 +21243,10 @@ relationship: has_value_type xsd\:string ! The allowed value-type for this CV te id: MS:1003086 name: precursor apex intensity def: "Intensity of the precursor ion current as measured by its apex point over time and m/z. It is unspecified whether this is the intensity of the selected isotope or the most intense isotope." [PSI:MS] -xref: value-type:xsd\:string "The allowed value-type for this CV term." +xref: value-type:xsd\:float "The allowed value-type for this CV term." is_a: MS:1001141 ! intensity of precursor ion is_a: MS:1000499 ! spectrum attribute -relationship: has_value_type xsd\:string ! The allowed value-type for this CV term +relationship: has_value_type xsd\:float ! The allowed value-type for this CV term [Term] id: MS:1003087 @@ -22336,6 +22337,7 @@ id: MS:1003237 name: library spectrum key def: "An ordinal number uniquely identifying a spectrum in a library. Library spectrum keys should start at 1. Library spectrum keys SHOULD not change if entries are re-ordered or removed from a library." [PSI:PI] is_a: MS:1003234 ! library spectrum attribute +relationship: has_value_type xsd\:integer ! The allowed value-type for this CV term [Term] id: MS:1003238