From c8ec8b5648ddd2bdac88f706a7431352ecab30e2 Mon Sep 17 00:00:00 2001
From: Josh Loecker <joshloecker@gmail.com>
Date: Thu, 25 Apr 2024 14:44:19 -0500
Subject: [PATCH] Edit default scratch location (#66)

Signed-off-by: Josh Loecker <joshloecker@gmail.com>
Co-authored-by: Josh Loecker <joshloecker@icloud.com>
---
 config.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/config.yaml b/config.yaml
index 4b29060..87e513f 100644
--- a/config.yaml
+++ b/config.yaml
@@ -14,7 +14,7 @@ MASTER_CONTROL: "controls/master_control.csv"
 ROOTDIR: "results"
 
 # The scratch location of your computer or cluster
-SCRATCH_DIR: "/tmp/FastqToGeneCounts"
+SCRATCH_DIR: "/scratch"
 
 # If you are processing local FastQ items, set this to the location of your items
 LOCAL_FASTQ_FILES: "results/dump_fastq_input"