Skip to content
Permalink

Comparing changes

Choose two branches to see what’s changed or to start a new pull request. If you need to, you can also or learn more about diff comparisons.

Open a pull request

Create a new pull request by comparing changes across two branches. If you need to, you can also . Learn more about diff comparisons here.
base repository: IFB-ElixirFr/FAIR-checker
Failed to load repositories. Confirm that selected base ref is valid, then try again.
Loading
base: v1.2.6
Choose a base ref
...
head repository: IFB-ElixirFr/FAIR-checker
Failed to load repositories. Confirm that selected head ref is valid, then try again.
Loading
compare: master
Choose a head ref
1 contributor
Loading
Showing with 73,766 additions and 1,386 deletions.
  1. +59,429 −0 EDAM_1.25.owl
  2. +359 −194 app.py
  3. +1 −1 data/usage_stats.json
  4. +1,361 −0 domains.csv
  5. +122 −0 dumps/01166293-97f7-404e-97e5-d1442d944b38.nq
  6. +122 −0 dumps/23838dac-adfe-4aeb-b7c7-97699d2dcb0f.nq
  7. +96 −0 dumps/d9d7f1c6-7b74-462f-947e-eed4ef16427f.nq
  8. +1 −1 environment.yml
  9. +2 −0 input_urls.txt
  10. +69 −4 metrics/Evaluation.py
  11. +0 −1 metrics/F1A_Impl.py
  12. +1 −2 metrics/F1B_Impl.py
  13. +1 −4 metrics/F2A_Impl.py
  14. +1 −2 metrics/F2B_Impl.py
  15. +14 −14 metrics/FAIRMetricsFactory.py
  16. +1 −1 metrics/I1A_Impl.py
  17. +1 −2 metrics/I1B_Impl.py
  18. +1 −2 metrics/I1_Impl.py
  19. +1 −1 metrics/I2B_Impl.py
  20. +1 −3 metrics/I2_Impl.py
  21. +1 −1 metrics/I3_Impl.py
  22. +1 −2 metrics/R11_Impl.py
  23. +1 −2 metrics/R12_Impl.py
  24. +1 −3 metrics/R13_Impl.py
  25. +15 −10 metrics/WebResource.py
  26. +1 −1 metrics/test_metric.py
  27. +144 −2 metrics/util.py
  28. +2 −0 months.csv
  29. +272 −0 notebooks/Benchmarking FAIR assesment tools.ipynb
  30. +799 −0 notebooks/CDR FAIRness evaluation.ipynb
  31. +104 −174 notebooks/CMD_FC_Demo_Notebook.ipynb
  32. +1 −1 notebooks/Check_Bioschemas_live_deploys.ipynb
  33. +618 −33 notebooks/Consuming the FAIR-Checker API.ipynb
  34. +673 −0 notebooks/DCSO2schema.ipynb
  35. +533 −0 notebooks/FAIRChecker_spec_AG_V2.py
  36. +2,103 −0 notebooks/FAIRness evaluation - Dekalog.ipynb
  37. +88 −0 notebooks/Signposting_Tests.ipynb
  38. +872 −0 notebooks/Untitled.ipynb
  39. +64 −0 notebooks/Untitled1.ipynb
  40. +0 −528 notebooks/Usage Statistics.ipynb
  41. +139 −0 notebooks/bioschemas_harvesting.csv
  42. +140 −0 notebooks/bioschemas_harvesting.md
  43. +104 −0 notebooks/bioschemas_validation.csv
  44. +105 −0 notebooks/bioschemas_validation.md
  45. BIN notebooks/boxplot.png
  46. +579 −0 notebooks/dcso.example.4.0.0.ttl
  47. +19 −0 notebooks/domains.csv
  48. BIN notebooks/domains.pdf
  49. BIN notebooks/domains.png
  50. +14 −0 notebooks/fairchecker_dekalog_evals.csv
  51. +14 −0 notebooks/fc_dekalog_evals.csv
  52. +26 −0 notebooks/fc_evals.csv
  53. +393 −0 notebooks/sandbox/bioschemas-profiles-rdf.ipynb
  54. +1,022 −0 notebooks/stats/Usage Statistics.ipynb
  55. +45 −0 notebooks/stats/cumulated_evals.py
  56. +2 −0 notebooks/stats/cumulated_months.csv
  57. BIN notebooks/stats/cumulative_count.pdf
  58. BIN notebooks/stats/cumulative_count.png
  59. BIN notebooks/stats/cumulative_count_log.png
  60. +2 −0 notebooks/stats/cumulative_evals.csv
  61. +48 −0 notebooks/stats/cumulative_evals.py
  62. 0 notebooks/{ → stats}/genStats.sh
  63. 0 notebooks/{ → stats}/gen_stats.py
  64. BIN notebooks/stats/monthly.pdf
  65. BIN notebooks/stats/monthly.png
  66. +2 −0 notebooks/stats/months.csv
  67. +140 −0 notebooks/stats/rdf_dump.py
  68. BIN notebooks/stats/stats.png
  69. BIN notebooks/stats/stats_m.png
  70. +2 −0 notebooks/stats/year.csv
  71. +17 −0 notebooks/test_fr_instance.py
  72. +0 −138 profile_recomender.py
  73. +133 −0 profile_recommender.py
  74. +10 −16 profiles/Profile.py
  75. +1 −1 profiles/ProfileFactory.py
  76. +2 −2 profiles/bioschemas_shape_gen.py
  77. +1 −1 profiles/bs_profiles.json
  78. +1 −1 static/data/identifiers.org.dump.json
  79. BIN static/favicon.ico
  80. BIN static/favicon_4.ico
  81. BIN static/images/favicon.png
  82. BIN static/images/logo-FAIR-Checker.png
  83. BIN stats.png
  84. BIN stats_m.png
  85. +2,327 −0 taxrefld_singlefile_metadata.ttl
  86. +1 −5 templates/about.html
  87. +144 −86 templates/check.html
  88. +9 −8 templates/footer.html
  89. +28 −25 templates/metrics_table.html
  90. +85 −0 templates/profile_reco.html
  91. +16 −113 templates/radar_chart.html
  92. +85 −0 templates/terms.html
  93. +158 −0 test_api.py
  94. +1 −1 tests/test_profile_reco.py
  95. +47 −0 tests/test_signposting.py
  96. +24 −0 tests/test_vocab.py
  97. +1 −0 usage_stats.json
  98. +2 −0 year.csv
Loading