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wizard.explanations.config.js
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wizard.explanations.config.js
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window.explanations = [
{
"id": "DM-1",
"miappeTerm": "Investigation",
"definition": "Investigations are research programmes with defined aims. They can exist at various scales (for example, they could encompass a grant-funded programme of work, the various components comprising a peer-reviewed publication, or a single experiment).",
"example": "",
"format": "1 per MIAPPE submission",
"cardinality": ""
},
{
"id": "DM-2",
"miappeTerm": "Investigation unique ID",
"question": "What is the unique ID of your investigation?",
"definition": "Identifier comprising the unique name of the institution/database hosting the submission of the investigation data, and the accession number of the investigation in that institution.",
"example": "EBI:12345678",
"format": "Unique identifier",
"cardinality": "0-1"
},
{
"id": "DM-3",
"miappeTerm": "Investigation title",
"question": "What is the title of your investigation?",
"definition": "Title summarising the plant phenotyping project.",
"example": "Adaptation of Maize to Temperate Climates: Mid-Density Genome-Wide Association Genetics and Diversity Patterns Reveal Key Genomic Regions, with a Major Contribution of the Vgt2 (ZCN8) Locus.",
"format": "Free text (short)",
"cardinality": "1"
},
{
"id": "DM-4",
"miappeTerm": "Investigation description",
"question": "Please describe your investigation.",
"definition": "A text summarising the plant phenotyping project in more detail.",
"example": "The migration of maize from tropical to temperate climates was accompanied by a dramatic evolution in flowering time. To gain insight into the genetic architecture of this adaptive trait, we conducted a 50K SNP-based genome-wide association and diversity investigation on a panel of tropical and temperate American and European representatives.",
"format": "Free text",
"cardinality": "0-1"
},
{
"id": "DM-5",
"miappeTerm": "Submission date",
"question": "When was the dataset submitted to a repository?",
"definition": "Date of submission of the dataset presently being described to a host repository.",
"example": "2012-12-17",
"format": "Date/Time (ISO 8601, optional time zone)",
"cardinality": "0-1"
},
{
"id": "DM-6",
"miappeTerm": "Public release date",
"question": "What is the date of the first public release of the dataset?",
"definition": "Date of first public release of the dataset presently being described.",
"example": "2013-02-25",
"format": "Date/Time (ISO 8601, optional time zone)",
"cardinality": "0-1"
},
{
"id": "DM-7",
"miappeTerm": "License",
"definition": "License for the reuse of the data associated with this investigation. The Creative Commons licenses cover most use cases and are recommended.",
"example": "CC BY-SA 4.0, Unreported",
"format": "Unique identifier",
"cardinality": "0-1"
},
{
"id": "DM-8",
"miappeTerm": "MIAPPE version",
"definition": "The version of MIAPPE used.",
"example": "1.1",
"format": "Version number",
"cardinality": "1"
},
{
"id": "DM-9",
"miappeTerm": "Associated publication",
"definition": "An identifier for a literature publication where the investigation is described. Use of DOIs is recommended.",
"example": "doi:10.1371/journal.pone.0071377",
"format": "DOI",
"cardinality": "0+"
},
{
"id": "DM-10",
"miappeTerm": "Study",
"definition": "A study (or experiment) comprises a series of assays (or measurements) of one or more types, undertaken to answer a particular biological question.",
"example": "",
"format": "1+ per investigation",
"cardinality": ""
},
{
"id": "DM-11",
"miappeTerm": "Study unique ID",
"definition": "Unique identifier comprising the name or identifier for the institution/database hosting the submission of the study data, and the identifier of the study in that institution.",
"example": "\"EBI:12345678\nhttp://phenome-fppn.fr/maugio/2013/t2351\"",
"format": "Unique identifier",
"cardinality": "0-1"
},
{
"id": "DM-12",
"miappeTerm": "Study title",
"definition": "Human-readable text summarising the study",
"example": "2002 evaluation of flowering time for a panel of 375 maize lines at the experimental station of Maugio (France).",
"format": "Free text (short)",
"cardinality": "1"
},
{
"id": "DM-13",
"miappeTerm": "Study description",
"definition": "Human-readable text describing the study",
"example": "2002 evaluation of male and female flowering time for a panel of 375 maize lines representing the worldwide genetic diversity at the experimental station of Maugio, France.",
"format": "Free text",
"cardinality": "0-1"
},
{
"id": "DM-14",
"miappeTerm": "Start date of study",
"definition": "Date and, if relevant, time when the experiment started",
"example": "\"2002-04-04\n2006-09-27T10:23:21+00:00\"",
"format": "Date/Time (ISO 8601, optional time zone)",
"cardinality": "1"
},
{
"id": "DM-15",
"miappeTerm": "End date of study",
"definition": "Date and, if relevant, time when the experiment ended",
"example": "2002-11-27",
"format": "Date/Time (ISO 8601, optional time zone)",
"cardinality": "0-1"
},
{
"id": "DM-16",
"miappeTerm": "Contact institution",
"definition": "Name and address of the institution responsible for the study.",
"example": "IPK Gatersleben, Stadt Seeland, Germany",
"format": "Free text (short)",
"cardinality": "1"
},
{
"id": "DM-17",
"miappeTerm": "Geographic location (country)",
"definition": "The country where the experiment took place, either as a full name or preferably as a 2-letter code.",
"example": "FR",
"format": "Country name or 2-letter code (ISO 3166)",
"cardinality": "1"
},
{
"id": "DM-18",
"miappeTerm": "Experimental site name",
"definition": "The name of the natural site, experimental field, greenhouse, phenotyping facility, etc. where the experiment took place.",
"example": "Experimental field west, IPK Gatersleben, Germany",
"format": "Free text (short)",
"cardinality": "1"
},
{
"id": "DM-19",
"miappeTerm": "Geographic location (latitude)",
"definition": "Latitude of the experimental site in degrees, in decimal format.",
"example": "+43.619264",
"format": "Degrees in the decimal format (ISO 6709)",
"cardinality": "0-1 (1 if longitude is provided)"
},
{
"id": "DM-20",
"miappeTerm": "Geographic location (longitude)",
"definition": "Longitude of the experimental site in degrees, in decimal format.",
"example": "+3.967454",
"format": "Degrees in the decimal format (ISO 6709)",
"cardinality": "0-1 (1 if latitude is provided)"
},
{
"id": "DM-21",
"miappeTerm": "Geographic location (altitude)",
"definition": "Altitude of the experimental site, provided in metres (m).",
"example": "100 m",
"format": "Numeric + unit abbreviation",
"cardinality": "0-1"
},
{
"id": "DM-67",
"miappeTerm": "Growth Protocol Description",
"definition": "Human-readable text describing how the plants growed up.",
"example": "The plants were grown in a Lemna-Tec greenhouse under constant conditions.",
"format": "",
"cardinality": "0-1"
}
]