runtest.sh

output_directory="results"

echo -e "======\n Testing NF execution \n======"
nextflow run benchmarkme_one.nf \
	--output_dir $output_directory \
	-with-report $output_directory/`date +%Y%m%d_%H%M%S`_report.html \
	-with-dag $output_directory/`date +%Y%m%d_%H%M%S`.DAG.html \
&& echo -e "======\n Basic pipeline TEST SUCCESSFUL \n======"