diff --git a/caller/match_star_allele.py b/caller/match_star_allele.py index 3265a3d..9d9c1f1 100644 --- a/caller/match_star_allele.py +++ b/caller/match_star_allele.py @@ -456,7 +456,8 @@ def update_variants(var_observed, cnvcall, exon9): and exon9.exon9_cn <= 1 ): if "g.42126611C>G" not in var_observed or ( - exon9.exon9_raw_site1 < 1.15 and exon9.exon9_raw_site2 < 1.15 + min(exon9.exon9_raw_site1, exon9.exon9_raw_site2) < 1.15 + and max(exon9.exon9_raw_site1, exon9.exon9_raw_site2) < 1.2 ): for _ in range(exon9.exon9cn_in_consensus - exon9.exon9_cn): var_observed.append("exon9gc")