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1 | 1 | # Changelog
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2 | 2 |
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3 | 3 | ## v2.6.0 (17/11/2022)
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4 |
| -- [**enhancement**] Add an annotation remover. [#154](https://github.com/JULIELab/jcore-base/issues/154) |
5 |
| -- [**enhancement**] Add a truncation size parameter to PMC XML multipliers [#153](https://github.com/JULIELab/jcore-base/issues/153) |
| 4 | + |
| 5 | +#### New components |
| 6 | + |
6 | 7 | - [**new component**] Add GNP Multiplier for PMC DB Reader [#152](https://github.com/JULIELab/jcore-base/issues/152)
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7 | 8 | - [**new component**] Add GNP multipliers for XMI and XML DB multiplier readers [#150](https://github.com/JULIELab/jcore-base/issues/150)
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8 | 9 | - [**new component**] Add a GNormPlus UIMA component [#147](https://github.com/JULIELab/jcore-base/issues/147)
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9 |
| -- [**enhancement**] Allow regular expression feature value filters for EntityConsumer [#146](https://github.com/JULIELab/jcore-base/issues/146) |
10 | 10 | - [**new component**] Add reader for NLM-Gene [#145](https://github.com/JULIELab/jcore-base/issues/145)
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11 |
| -- [**bug**] Fix a bug where half of the DBMultiplierReader IDs were not actually processed [#144](https://github.com/JULIELab/jcore-base/issues/144) |
| 11 | +- [**new component**] Add an MMAX2 reader. [#136](https://github.com/JULIELab/jcore-base/issues/136) |
| 12 | +- [**new component**] Add GNormPlus BioC XML reader [#131](https://github.com/JULIELab/jcore-base/issues/131) |
| 13 | +- [**new component**] Add a GNormPlus BioC Writer [#129](https://github.com/JULIELab/jcore-base/issues/129) |
| 14 | +- [**new component**] Add a PMC DB Reader [#128](https://github.com/JULIELab/jcore-base/issues/128) |
| 15 | +- [**new component**] Add a consumer to write relations to Neo4j [#113](https://github.com/JULIELab/jcore-base/issues/113) |
| 16 | +- [**new component**] Add an embedding writer [#102](https://github.com/JULIELab/jcore-base/issues/102) |
| 17 | +- [**new component**] Add a Flair embedding adding component [#101](https://github.com/JULIELab/jcore-base/issues/101) |
| 18 | +- [**new component**] Add a FLAIR NER component [#100](https://github.com/JULIELab/jcore-base/issues/100) |
| 19 | + |
| 20 | +#### General Enhancements |
| 21 | + |
| 22 | +- [**enhancement**] Add an annotation remover. [#154](https://github.com/JULIELab/jcore-base/issues/154) |
| 23 | +- [**enhancement**] Add a truncation size parameter to PMC XML multipliers [#153](https://github.com/JULIELab/jcore-base/issues/153) |
| 24 | +- [**enhancement**] Allow regular expression feature value filters for EntityConsumer [#146](https://github.com/JULIELab/jcore-base/issues/146) |
12 | 25 | - [**enhancement**] Add H2-based annotation source for AnnotationAdder [#138](https://github.com/JULIELab/jcore-base/issues/138)
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13 | 26 | - [**enhancement**] Add a feature-based format to the annotation adder [#137](https://github.com/JULIELab/jcore-base/issues/137)
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14 |
| -- [**new component**] Add an MMAX2 reader. [#136](https://github.com/JULIELab/jcore-base/issues/136) |
15 | 27 | - [**enhancement**] Let GNP BioC writer add Gene annotations. [#134](https://github.com/JULIELab/jcore-base/issues/134)
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16 | 28 | - [**enhancement**] Implement max XMI ID retrieval for the BioC GNormPlus Reader [#133](https://github.com/JULIELab/jcore-base/issues/133)
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17 |
| -- [**new component**] Add GNormPlus BioC XML reader [#131](https://github.com/JULIELab/jcore-base/issues/131) |
18 | 29 | - [**enhancement**] Add a mechanism to avoid mirror subset reset for updated JeDIS document whose text hasn't changed [#130](https://github.com/JULIELab/jcore-base/issues/130)
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19 |
| -- [**new component**] Add a GNormPlus BioC Writer [#129](https://github.com/JULIELab/jcore-base/issues/129) |
20 |
| -- [**new component**] Add a PMC DB Reader [#128](https://github.com/JULIELab/jcore-base/issues/128) |
21 | 30 | - [**enhancement**] PMCReader: Add option to omit bibliographical references [#127](https://github.com/JULIELab/jcore-base/issues/127)
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| 31 | + |
| 32 | +#### Bug Fixes |
| 33 | + |
| 34 | +- [**bug**] Fix a bug where half of the DBMultiplierReader IDs were not actually processed [#144](https://github.com/JULIELab/jcore-base/issues/144) |
22 | 35 | - [**bug**] ESConsumer: Fix bugs with cache index when resource file is updated [#126](https://github.com/JULIELab/jcore-base/issues/126)
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23 | 36 | - [**bug**] Fix Bug in JSBD where Cut Away Types can still be included in the begin of a sentence. [#125](https://github.com/JULIELab/jcore-base/issues/125)
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| 37 | +- [**bug**] JSBD: Fix bug that occurs when cut away types and sentence delimiter types are given [#121](https://github.com/JULIELab/jcore-base/issues/121) |
| 38 | + |
| 39 | +#### Miscellaneous Changes |
| 40 | + |
24 | 41 | - [**closed**] Map payloads to features for AnnotationAdder [#124](https://github.com/JULIELab/jcore-base/issues/124)
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25 | 42 | - [**closed**] ES Consumer: Provide persistent Map and Addon terms providers [#123](https://github.com/JULIELab/jcore-base/issues/123)
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26 |
| -- [**bug**] JSBD: Fix bug that occurs when cut away types and sentence delimiter types are given [#121](https://github.com/JULIELab/jcore-base/issues/121) |
27 | 43 | - [**closed**] Add a flow controller that creates a flow based on a CAS annotation [#120](https://github.com/JULIELab/jcore-base/issues/120)
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28 | 44 | - [**closed**] JCoreOverlapIndex: Return the list instead of a stream [#117](https://github.com/JULIELab/jcore-base/issues/117)
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29 | 45 | - [**closed**] lingpipe gazetteer: fix offset issues [#116](https://github.com/JULIELab/jcore-base/issues/116)
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30 |
| -- [**new component**] Add a consumer to write relations to Neo4j [#113](https://github.com/JULIELab/jcore-base/issues/113) |
31 |
| -- [**new component**] Add an embedding writer [#102](https://github.com/JULIELab/jcore-base/issues/102) |
32 |
| -- [**new component**] Add a Flair embedding adding component [#101](https://github.com/JULIELab/jcore-base/issues/101) |
33 |
| -- [**new component**] Add a FLAIR NER component [#100](https://github.com/JULIELab/jcore-base/issues/100) |
34 | 46 |
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35 | 47 | ---
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36 | 48 |
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