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CyTOF-PlotViewer

Plots log histograms for user-selected parameters of FCS files like Fluidigm's PlotViewer program. Works for both CyTOF and Flow.

UPDATE 3rd Mar 2020 - Improved memory usage and processing time by downsampling data.

e.g. like this:

I realised that the PlotViewer program, supplied with Fluidigm's CyTOF software, although limited, is quite nice in the way it shows histograms of the data.

I set about trying to recreate this so that I could quickly view every (or a selection of) parameter(s) in FCS files.

I'm quite happy with how it turned out.

See also:

https://github.com/JimboMahoney/CytobankGraphs

https://github.com/JimboMahoney/CytoBars