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Exception in thread error #15

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NicoleSchieber opened this issue Jan 20, 2025 · 1 comment
Open

Exception in thread error #15

NicoleSchieber opened this issue Jan 20, 2025 · 1 comment

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@NicoleSchieber
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In trying to use the RegistrationTree I got this error when adding a BigWarp node

Keymap list file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/keymaps/keymaps.yaml not found. Using builtin styles.
Appearance settings file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/appearance.yaml not found. Using defaults.
3D [dev] 1.6.0-scijava-3-SNAPSHOT-pre11-daily-experimental daily

3D View: Fetching source raw at resolution 8.6192 ,8.6192 ,8.6192 micrometer...
nFrames = 1
Keymap list file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/keymaps/keymaps.yaml not found. Using builtin styles.
Appearance settings file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/appearance.yaml not found. Using defaults.
3D View: Fetching source raw at resolution 8.632 ,8.632 ,8.632 micrometer...
nFrames = 1
typed ... WriteSequenceToHdf5.writeViewToHdf5PartitionFile
Keymap list file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/keymaps/keymaps.yaml not found. Using builtin styles.
Appearance settings file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/appearance.yaml not found. Using defaults.
Keymap list file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/keymaps/keymaps.yaml not found. Using builtin styles.
Appearance settings file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/appearance.yaml not found. Using defaults.
Keymap list file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/keymaps/keymaps.yaml not found. Using builtin styles.
Appearance settings file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/appearance.yaml not found. Using defaults.
Keymap list file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/keymaps/keymaps.yaml not found. Using builtin styles.
Appearance settings file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/appearance.yaml not found. Using defaults.
Exception in thread "Thread-61" java.lang.NoSuchMethodError: bigwarp.BigWarpInit.createBigWarpData([Lbdv/viewer/Source;[Lbdv/viewer/Source;[Ljava/lang/String;)Lbigwarp/BigWarp$BigWarpData;
at de.embl.schwab.registrationTree.BigWarpManager.openBigWarp(BigWarpManager.java:44)
at de.embl.schwab.registrationTree.BigWarpManager.openBigwarpAtSelectedNode(BigWarpManager.java:37)
at de.embl.schwab.registrationTree.ui.RegistrationContextMenu.addTransformDialog(RegistrationContextMenu.java:185)
at de.embl.schwab.registrationTree.ui.RegistrationContextMenu$9.lambda$actionPerformed$0(RegistrationContextMenu.java:155)
at java.lang.Thread.run(Thread.java:748)
Exception in thread "Thread-62" java.lang.NoSuchMethodError: bigwarp.BigWarpInit.createBigWarpData([Lbdv/viewer/Source;[Lbdv/viewer/Source;[Ljava/lang/String;)Lbigwarp/BigWarp$BigWarpData;
at de.embl.schwab.registrationTree.BigWarpManager.openBigWarp(BigWarpManager.java:44)
at de.embl.schwab.registrationTree.BigWarpManager.openBigwarpAtSelectedNode(BigWarpManager.java:37)
at de.embl.schwab.registrationTree.ui.RegistrationContextMenu.addTransformDialog(RegistrationContextMenu.java:185)
at de.embl.schwab.registrationTree.ui.RegistrationContextMenu$9.lambda$actionPerformed$0(RegistrationContextMenu.java:155)
at java.lang.Thread.run(Thread.java:748)

@K-Meech
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K-Meech commented Jan 27, 2025

Thanks @NicoleSchieber - hopefully I'll have time to look into this later this week. I imagine it's due to updates to BigWarp, as I haven't updated the code in this repo for a long time!

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