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CAETÊ

AUTHORS:

  • Bianca Rius
  • David Lapola
  • Helena Alves
  • João Paulo Darela Filho
  • Put you name here! (labterra@unicamp.br)

SOFTWARE REQUIREMENTS

To run the model in development mode:

  • Python3 + numpy + netCDF4 + (libs for plotting things)
  • gfortran >= 5

FORTRAN FILES

    global.f90
    funcs.f90
    productivity.f90
    budget.f90
    caete.f90

  • global.f90 <- contains several modules.

    • types: Real, integer and logical standard types defined in gfortran+amd64.
    • global_par: global parameters.
    • photo_par: constants and parameters for the photosynthesis models.
    • soil_dec: new decomposition module, contains the subroutine carbon3 and others.

  • funcs.f90 <- contains two modules.

    • photo: definition of several functions related with ecophysiological/ecosystem function and model management.
    • water: definition of several functions related with the hydrologic cycle.

  • productivity.f90 <- Contains one module with one subroutine.

    • productivity: definition of subrotine prod that calculates the primary productivity using some functions of photo(func.f90) module.

  • budget.f90 <- Contains one module (budget) with one subroutine.

    • budget: definition of subroutine daily_budget which calculates (a) daily productivity using prod subroutine. and (b) daily water budget (hydrology) using funtions of the water(funcs.f90) module.

  • caete.f90 <- Contains one module (caete) with one subroutine.

    • caete: contains the definition of caete_dyn that execute the model trought a timespan.

PYTHON FILES

  • caete.py: main python script with functions that define the execution of the model. Currently the only classes and funcions related with model application in individual gridcells are implemented. (contém gambiarras)

  • plsgen.py: python script that creates the table of CAETÊ Plant Life Strategies.

  • test_mod.py: Script that executes the model to some gridcells. Contains the base structure for model execution to be implemented in caete.py

Other python files

  • create_input.py: how to use the caete.data_in class for generate/organize the environmental input data for CAETÊ

  • write_output.py: old version- Made to save the outputs of CAETE-PVM

  • caete_driver.py old version - Made to drive the execution of CAETE-PVM runs and save the models outputs

MODEL INPUTS

GAMBIARRA

Compile the module

Compile caete_module running the script build.sh:

$ ./build.sh

See the build.sh script.

All the fortran files described are compiled using the f2py tool that is part of numpy. Details can be found here: f2py user guide.

The resulting module (caete_module) is 'importable' in python environments.