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PRESIMAL 2022 workshop

Part of the PRESIMAL Autumn Research School on Artificial Intelligence in Medical Imaging, Sept 14–16, 2022.

13.09.22, Alexander Selvikvåg Lundervold

The lecture and the accompanying workshop take you on a short guided tour of deep learning in the context of medical imaging, showcasing AI-driven biomarker analysis.

Slides

Here you'll find PDF versions of the lecture slides.

Slides from presentation

Slides from the presentation Medical AI: Development, Application, and Evaluation of Machine Learning in Medicine.

Slides from the workshop

The workshop builds upon the earlier presentation and provide (i) an introduction to deep learning (connected to notebook 2.0-asl-deep_learning_brain_tumor_segmentation.ipynb linked below), (ii) hands-on example of AI-driven biomarker analysis (notebook 1.0-asl-brain_tumor_analysis_radiomics.ipynb), and (iii) a quick look at our fastMONAI deep learning library.

Notebooks

The hands-on part of the workshop is based on the first two notebooks linked below, as well as the tutorial notebooks of fastMONAI.

Notebook 1-Click Notebook
1.0-asl-brain_tumor_analysis_radiomics.ipynb
2.0-asl-deep_learning_brain_tumor_segmentation.ipynb Google Colab

fastMONAI

You'll find the fastMONAI tutorial notebooks through the below link. We'll have a look at these during the workshop: