diff --git a/stable/_modules/index.html b/stable/_modules/index.html index 5c274adc9..641a15c5e 100644 --- a/stable/_modules/index.html +++ b/stable/_modules/index.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/config.html b/stable/_modules/mpas_tools/config.html index 5bd91d295..b026d8b8d 100644 --- a/stable/_modules/mpas_tools/config.html +++ b/stable/_modules/mpas_tools/config.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/io.html b/stable/_modules/mpas_tools/io.html index 7eb3291d0..70afc5f29 100644 --- a/stable/_modules/mpas_tools/io.html +++ b/stable/_modules/mpas_tools/io.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/logging.html b/stable/_modules/mpas_tools/logging.html index 4d0fb7043..7c6a93ce3 100644 --- a/stable/_modules/mpas_tools/logging.html +++ b/stable/_modules/mpas_tools/logging.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/merge_grids.html b/stable/_modules/mpas_tools/merge_grids.html index 96f68def8..db29f0d24 100644 --- a/stable/_modules/mpas_tools/merge_grids.html +++ b/stable/_modules/mpas_tools/merge_grids.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/mesh/conversion.html b/stable/_modules/mpas_tools/mesh/conversion.html index c297b13fc..784729ab6 100644 --- a/stable/_modules/mpas_tools/mesh/conversion.html +++ b/stable/_modules/mpas_tools/mesh/conversion.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/mesh/creation/build_mesh.html b/stable/_modules/mpas_tools/mesh/creation/build_mesh.html index fd80e3768..3a23e83ce 100644 --- a/stable/_modules/mpas_tools/mesh/creation/build_mesh.html +++ b/stable/_modules/mpas_tools/mesh/creation/build_mesh.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/mesh/creation/jigsaw_driver.html b/stable/_modules/mpas_tools/mesh/creation/jigsaw_driver.html index 80aef073a..2a3ca7d49 100644 --- a/stable/_modules/mpas_tools/mesh/creation/jigsaw_driver.html +++ b/stable/_modules/mpas_tools/mesh/creation/jigsaw_driver.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/mesh/creation/jigsaw_to_netcdf.html b/stable/_modules/mpas_tools/mesh/creation/jigsaw_to_netcdf.html index ae899df3c..95ccfac0c 100644 --- a/stable/_modules/mpas_tools/mesh/creation/jigsaw_to_netcdf.html +++ b/stable/_modules/mpas_tools/mesh/creation/jigsaw_to_netcdf.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/mesh/creation/mesh_definition_tools.html b/stable/_modules/mpas_tools/mesh/creation/mesh_definition_tools.html index 9fd720582..d87f71835 100644 --- a/stable/_modules/mpas_tools/mesh/creation/mesh_definition_tools.html +++ b/stable/_modules/mpas_tools/mesh/creation/mesh_definition_tools.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/mesh/creation/mpas_to_triangle.html b/stable/_modules/mpas_tools/mesh/creation/mpas_to_triangle.html index bf1deed6a..efb692653 100644 --- a/stable/_modules/mpas_tools/mesh/creation/mpas_to_triangle.html +++ b/stable/_modules/mpas_tools/mesh/creation/mpas_to_triangle.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/mesh/creation/signed_distance.html b/stable/_modules/mpas_tools/mesh/creation/signed_distance.html index 46ec3a77e..88f9b2bc1 100644 --- a/stable/_modules/mpas_tools/mesh/creation/signed_distance.html +++ b/stable/_modules/mpas_tools/mesh/creation/signed_distance.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/mesh/creation/triangle_to_netcdf.html b/stable/_modules/mpas_tools/mesh/creation/triangle_to_netcdf.html index c730bb7b1..96bae9179 100644 --- a/stable/_modules/mpas_tools/mesh/creation/triangle_to_netcdf.html +++ b/stable/_modules/mpas_tools/mesh/creation/triangle_to_netcdf.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/mesh/cull.html b/stable/_modules/mpas_tools/mesh/cull.html index b4d4a93d8..0ce3937bd 100644 --- a/stable/_modules/mpas_tools/mesh/cull.html +++ b/stable/_modules/mpas_tools/mesh/cull.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/mesh/interpolation.html b/stable/_modules/mpas_tools/mesh/interpolation.html index f1674a3f2..60267c6ac 100644 --- a/stable/_modules/mpas_tools/mesh/interpolation.html +++ b/stable/_modules/mpas_tools/mesh/interpolation.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/mesh/mask.html b/stable/_modules/mpas_tools/mesh/mask.html index 89ec8a1f8..574f10e98 100644 --- a/stable/_modules/mpas_tools/mesh/mask.html +++ b/stable/_modules/mpas_tools/mesh/mask.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/ocean/build_mesh.html b/stable/_modules/mpas_tools/ocean/build_mesh.html index 9677a57e7..767f9ee1f 100644 --- a/stable/_modules/mpas_tools/ocean/build_mesh.html +++ b/stable/_modules/mpas_tools/ocean/build_mesh.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/ocean/coastal_tools.html b/stable/_modules/mpas_tools/ocean/coastal_tools.html index ab5278159..11df2a59f 100644 --- a/stable/_modules/mpas_tools/ocean/coastal_tools.html +++ b/stable/_modules/mpas_tools/ocean/coastal_tools.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/ocean/coastline_alteration.html b/stable/_modules/mpas_tools/ocean/coastline_alteration.html index 8f0cc6a8d..7484faa1b 100644 --- a/stable/_modules/mpas_tools/ocean/coastline_alteration.html +++ b/stable/_modules/mpas_tools/ocean/coastline_alteration.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/ocean/depth.html b/stable/_modules/mpas_tools/ocean/depth.html index 9f7aa01eb..1ff5cc562 100644 --- a/stable/_modules/mpas_tools/ocean/depth.html +++ b/stable/_modules/mpas_tools/ocean/depth.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/ocean/inject_bathymetry.html b/stable/_modules/mpas_tools/ocean/inject_bathymetry.html index bac8c5ecb..12ab01a5e 100644 --- a/stable/_modules/mpas_tools/ocean/inject_bathymetry.html +++ b/stable/_modules/mpas_tools/ocean/inject_bathymetry.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/ocean/inject_meshDensity.html b/stable/_modules/mpas_tools/ocean/inject_meshDensity.html index 443aef53e..30f8f26e2 100644 --- a/stable/_modules/mpas_tools/ocean/inject_meshDensity.html +++ b/stable/_modules/mpas_tools/ocean/inject_meshDensity.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/ocean/inject_preserve_floodplain.html b/stable/_modules/mpas_tools/ocean/inject_preserve_floodplain.html index 9070d3efa..4828750d2 100644 --- a/stable/_modules/mpas_tools/ocean/inject_preserve_floodplain.html +++ b/stable/_modules/mpas_tools/ocean/inject_preserve_floodplain.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/ocean/moc.html b/stable/_modules/mpas_tools/ocean/moc.html index 7b50c47ca..c7ff78246 100644 --- a/stable/_modules/mpas_tools/ocean/moc.html +++ b/stable/_modules/mpas_tools/ocean/moc.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/ocean/transects.html b/stable/_modules/mpas_tools/ocean/transects.html index c90f48618..b3a7bc053 100644 --- a/stable/_modules/mpas_tools/ocean/transects.html +++ b/stable/_modules/mpas_tools/ocean/transects.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/ocean/viz/inset.html b/stable/_modules/mpas_tools/ocean/viz/inset.html index 3fe465c92..dee8774bf 100644 --- a/stable/_modules/mpas_tools/ocean/viz/inset.html +++ b/stable/_modules/mpas_tools/ocean/viz/inset.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/ocean/viz/transects.html b/stable/_modules/mpas_tools/ocean/viz/transects.html index 51eafc33e..b63a1bd78 100644 --- a/stable/_modules/mpas_tools/ocean/viz/transects.html +++ b/stable/_modules/mpas_tools/ocean/viz/transects.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/parallel.html b/stable/_modules/mpas_tools/parallel.html index b26f9b700..2f9a97af0 100644 --- a/stable/_modules/mpas_tools/parallel.html +++ b/stable/_modules/mpas_tools/parallel.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/planar_hex.html b/stable/_modules/mpas_tools/planar_hex.html index 17b991fe9..1edec5cfb 100644 --- a/stable/_modules/mpas_tools/planar_hex.html +++ b/stable/_modules/mpas_tools/planar_hex.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/scrip/from_mpas.html b/stable/_modules/mpas_tools/scrip/from_mpas.html index 2309d169d..81ce82ca7 100644 --- a/stable/_modules/mpas_tools/scrip/from_mpas.html +++ b/stable/_modules/mpas_tools/scrip/from_mpas.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/seaice/mask.html b/stable/_modules/mpas_tools/seaice/mask.html index 27f149a36..17ad3860c 100644 --- a/stable/_modules/mpas_tools/seaice/mask.html +++ b/stable/_modules/mpas_tools/seaice/mask.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/seaice/mesh.html b/stable/_modules/mpas_tools/seaice/mesh.html index 5503d6612..89922fc58 100644 --- a/stable/_modules/mpas_tools/seaice/mesh.html +++ b/stable/_modules/mpas_tools/seaice/mesh.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/seaice/partition.html b/stable/_modules/mpas_tools/seaice/partition.html index 63b04a557..f06ebc748 100644 --- a/stable/_modules/mpas_tools/seaice/partition.html +++ b/stable/_modules/mpas_tools/seaice/partition.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/seaice/regions.html b/stable/_modules/mpas_tools/seaice/regions.html index 6571e2594..0468218d1 100644 --- a/stable/_modules/mpas_tools/seaice/regions.html +++ b/stable/_modules/mpas_tools/seaice/regions.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/seaice/regrid.html b/stable/_modules/mpas_tools/seaice/regrid.html index aa29d8e22..c29e82f46 100644 --- a/stable/_modules/mpas_tools/seaice/regrid.html +++ b/stable/_modules/mpas_tools/seaice/regrid.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/split_grids.html b/stable/_modules/mpas_tools/split_grids.html index df9f143cb..1d3d97ef3 100644 --- a/stable/_modules/mpas_tools/split_grids.html +++ b/stable/_modules/mpas_tools/split_grids.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/tests/test_cime_constants.html b/stable/_modules/mpas_tools/tests/test_cime_constants.html index 44872b8c3..a68b969a5 100644 --- a/stable/_modules/mpas_tools/tests/test_cime_constants.html +++ b/stable/_modules/mpas_tools/tests/test_cime_constants.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/transects.html b/stable/_modules/mpas_tools/transects.html index a2090c96d..471d15b46 100644 --- a/stable/_modules/mpas_tools/transects.html +++ b/stable/_modules/mpas_tools/transects.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/translate.html b/stable/_modules/mpas_tools/translate.html index 94a87fd79..e16fb4006 100644 --- a/stable/_modules/mpas_tools/translate.html +++ b/stable/_modules/mpas_tools/translate.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/vector.html b/stable/_modules/mpas_tools/vector.html index 8a94062e7..115476a34 100644 --- a/stable/_modules/mpas_tools/vector.html +++ b/stable/_modules/mpas_tools/vector.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/viz/colormaps.html b/stable/_modules/mpas_tools/viz/colormaps.html index 515657083..2dd3977c3 100644 --- a/stable/_modules/mpas_tools/viz/colormaps.html +++ b/stable/_modules/mpas_tools/viz/colormaps.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/viz/mesh_to_triangles.html b/stable/_modules/mpas_tools/viz/mesh_to_triangles.html index 2113e8a34..896b847f6 100644 --- a/stable/_modules/mpas_tools/viz/mesh_to_triangles.html +++ b/stable/_modules/mpas_tools/viz/mesh_to_triangles.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/viz/paraview_extractor.html b/stable/_modules/mpas_tools/viz/paraview_extractor.html index 887774df5..425ee5e98 100644 --- a/stable/_modules/mpas_tools/viz/paraview_extractor.html +++ b/stable/_modules/mpas_tools/viz/paraview_extractor.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_modules/mpas_tools/viz/transects.html b/stable/_modules/mpas_tools/viz/transects.html index 00c112cd4..b65093fcc 100644 --- a/stable/_modules/mpas_tools/viz/transects.html +++ b/stable/_modules/mpas_tools/viz/transects.html @@ -13,7 +13,7 @@ - + diff --git a/stable/_static/basic.css b/stable/_static/basic.css index 30fee9d0f..f316efcb4 100644 --- a/stable/_static/basic.css +++ b/stable/_static/basic.css @@ -4,7 +4,7 @@ * * Sphinx stylesheet -- basic theme. * - * :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS. + * :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS. * :license: BSD, see LICENSE for details. * */ diff --git a/stable/_static/doctools.js b/stable/_static/doctools.js index d06a71d75..4d67807d1 100644 --- a/stable/_static/doctools.js +++ b/stable/_static/doctools.js @@ -4,7 +4,7 @@ * * Base JavaScript utilities for all Sphinx HTML documentation. * - * :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS. + * :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS. * :license: BSD, see LICENSE for details. * */ diff --git a/stable/_static/language_data.js b/stable/_static/language_data.js index 250f5665f..367b8ed81 100644 --- a/stable/_static/language_data.js +++ b/stable/_static/language_data.js @@ -5,7 +5,7 @@ * This script contains the language-specific data used by searchtools.js, * namely the list of stopwords, stemmer, scorer and splitter. * - * :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS. + * :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS. * :license: BSD, see LICENSE for details. * */ @@ -13,7 +13,7 @@ var stopwords = ["a", "and", "are", "as", "at", "be", "but", "by", "for", "if", "in", "into", "is", "it", "near", "no", "not", "of", "on", "or", "such", "that", "the", "their", "then", "there", "these", "they", "this", "to", "was", "will", "with"]; -/* Non-minified version is copied as a separate JS file, is available */ +/* Non-minified version is copied as a separate JS file, if available */ /** * Porter Stemmer diff --git a/stable/_static/searchtools.js b/stable/_static/searchtools.js index 7918c3fab..92da3f8b2 100644 --- a/stable/_static/searchtools.js +++ b/stable/_static/searchtools.js @@ -4,7 +4,7 @@ * * Sphinx JavaScript utilities for the full-text search. * - * :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS. + * :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS. * :license: BSD, see LICENSE for details. * */ @@ -99,7 +99,7 @@ const _displayItem = (item, searchTerms, highlightTerms) => { .then((data) => { if (data) listItem.appendChild( - Search.makeSearchSummary(data, searchTerms) + Search.makeSearchSummary(data, searchTerms, anchor) ); // highlight search terms in the summary if (SPHINX_HIGHLIGHT_ENABLED) // set in sphinx_highlight.js @@ -116,8 +116,8 @@ const _finishSearch = (resultCount) => { ); else Search.status.innerText = _( - `Search finished, found ${resultCount} page(s) matching the search query.` - ); + "Search finished, found ${resultCount} page(s) matching the search query." + ).replace('${resultCount}', resultCount); }; const _displayNextItem = ( results, @@ -137,6 +137,22 @@ const _displayNextItem = ( // search finished, update title and status message else _finishSearch(resultCount); }; +// Helper function used by query() to order search results. +// Each input is an array of [docname, title, anchor, descr, score, filename]. +// Order the results by score (in opposite order of appearance, since the +// `_displayNextItem` function uses pop() to retrieve items) and then alphabetically. +const _orderResultsByScoreThenName = (a, b) => { + const leftScore = a[4]; + const rightScore = b[4]; + if (leftScore === rightScore) { + // same score: sort alphabetically + const leftTitle = a[1].toLowerCase(); + const rightTitle = b[1].toLowerCase(); + if (leftTitle === rightTitle) return 0; + return leftTitle > rightTitle ? -1 : 1; // inverted is intentional + } + return leftScore > rightScore ? 1 : -1; +}; /** * Default splitQuery function. Can be overridden in ``sphinx.search`` with a @@ -160,13 +176,26 @@ const Search = { _queued_query: null, _pulse_status: -1, - htmlToText: (htmlString) => { + htmlToText: (htmlString, anchor) => { const htmlElement = new DOMParser().parseFromString(htmlString, 'text/html'); - htmlElement.querySelectorAll(".headerlink").forEach((el) => { el.remove() }); + for (const removalQuery of [".headerlinks", "script", "style"]) { + htmlElement.querySelectorAll(removalQuery).forEach((el) => { el.remove() }); + } + if (anchor) { + const anchorContent = htmlElement.querySelector(`[role="main"] ${anchor}`); + if (anchorContent) return anchorContent.textContent; + + console.warn( + `Anchored content block not found. Sphinx search tries to obtain it via DOM query '[role=main] ${anchor}'. Check your theme or template.` + ); + } + + // if anchor not specified or not found, fall back to main content const docContent = htmlElement.querySelector('[role="main"]'); - if (docContent !== undefined) return docContent.textContent; + if (docContent) return docContent.textContent; + console.warn( - "Content block not found. Sphinx search tries to obtain it via '[role=main]'. Could you check your theme or template." + "Content block not found. Sphinx search tries to obtain it via DOM query '[role=main]'. Check your theme or template." ); return ""; }, @@ -239,16 +268,7 @@ const Search = { else Search.deferQuery(query); }, - /** - * execute search (requires search index to be loaded) - */ - query: (query) => { - const filenames = Search._index.filenames; - const docNames = Search._index.docnames; - const titles = Search._index.titles; - const allTitles = Search._index.alltitles; - const indexEntries = Search._index.indexentries; - + _parseQuery: (query) => { // stem the search terms and add them to the correct list const stemmer = new Stemmer(); const searchTerms = new Set(); @@ -284,16 +304,32 @@ const Search = { // console.info("required: ", [...searchTerms]); // console.info("excluded: ", [...excludedTerms]); - // array of [docname, title, anchor, descr, score, filename] - let results = []; + return [query, searchTerms, excludedTerms, highlightTerms, objectTerms]; + }, + + /** + * execute search (requires search index to be loaded) + */ + _performSearch: (query, searchTerms, excludedTerms, highlightTerms, objectTerms) => { + const filenames = Search._index.filenames; + const docNames = Search._index.docnames; + const titles = Search._index.titles; + const allTitles = Search._index.alltitles; + const indexEntries = Search._index.indexentries; + + // Collect multiple result groups to be sorted separately and then ordered. + // Each is an array of [docname, title, anchor, descr, score, filename]. + const normalResults = []; + const nonMainIndexResults = []; + _removeChildren(document.getElementById("search-progress")); - const queryLower = query.toLowerCase(); + const queryLower = query.toLowerCase().trim(); for (const [title, foundTitles] of Object.entries(allTitles)) { - if (title.toLowerCase().includes(queryLower) && (queryLower.length >= title.length/2)) { + if (title.toLowerCase().trim().includes(queryLower) && (queryLower.length >= title.length/2)) { for (const [file, id] of foundTitles) { let score = Math.round(100 * queryLower.length / title.length) - results.push([ + normalResults.push([ docNames[file], titles[file] !== title ? `${titles[file]} > ${title}` : title, id !== null ? "#" + id : "", @@ -308,46 +344,47 @@ const Search = { // search for explicit entries in index directives for (const [entry, foundEntries] of Object.entries(indexEntries)) { if (entry.includes(queryLower) && (queryLower.length >= entry.length/2)) { - for (const [file, id] of foundEntries) { - let score = Math.round(100 * queryLower.length / entry.length) - results.push([ + for (const [file, id, isMain] of foundEntries) { + const score = Math.round(100 * queryLower.length / entry.length); + const result = [ docNames[file], titles[file], id ? "#" + id : "", null, score, filenames[file], - ]); + ]; + if (isMain) { + normalResults.push(result); + } else { + nonMainIndexResults.push(result); + } } } } // lookup as object objectTerms.forEach((term) => - results.push(...Search.performObjectSearch(term, objectTerms)) + normalResults.push(...Search.performObjectSearch(term, objectTerms)) ); // lookup as search terms in fulltext - results.push(...Search.performTermsSearch(searchTerms, excludedTerms)); + normalResults.push(...Search.performTermsSearch(searchTerms, excludedTerms)); // let the scorer override scores with a custom scoring function - if (Scorer.score) results.forEach((item) => (item[4] = Scorer.score(item))); - - // now sort the results by score (in opposite order of appearance, since the - // display function below uses pop() to retrieve items) and then - // alphabetically - results.sort((a, b) => { - const leftScore = a[4]; - const rightScore = b[4]; - if (leftScore === rightScore) { - // same score: sort alphabetically - const leftTitle = a[1].toLowerCase(); - const rightTitle = b[1].toLowerCase(); - if (leftTitle === rightTitle) return 0; - return leftTitle > rightTitle ? -1 : 1; // inverted is intentional - } - return leftScore > rightScore ? 1 : -1; - }); + if (Scorer.score) { + normalResults.forEach((item) => (item[4] = Scorer.score(item))); + nonMainIndexResults.forEach((item) => (item[4] = Scorer.score(item))); + } + + // Sort each group of results by score and then alphabetically by name. + normalResults.sort(_orderResultsByScoreThenName); + nonMainIndexResults.sort(_orderResultsByScoreThenName); + + // Combine the result groups in (reverse) order. + // Non-main index entries are typically arbitrary cross-references, + // so display them after other results. + let results = [...nonMainIndexResults, ...normalResults]; // remove duplicate search results // note the reversing of results, so that in the case of duplicates, the highest-scoring entry is kept @@ -361,7 +398,12 @@ const Search = { return acc; }, []); - results = results.reverse(); + return results.reverse(); + }, + + query: (query) => { + const [searchQuery, searchTerms, excludedTerms, highlightTerms, objectTerms] = Search._parseQuery(query); + const results = Search._performSearch(searchQuery, searchTerms, excludedTerms, highlightTerms, objectTerms); // for debugging //Search.lastresults = results.slice(); // a copy @@ -466,14 +508,18 @@ const Search = { // add support for partial matches if (word.length > 2) { const escapedWord = _escapeRegExp(word); - Object.keys(terms).forEach((term) => { - if (term.match(escapedWord) && !terms[word]) - arr.push({ files: terms[term], score: Scorer.partialTerm }); - }); - Object.keys(titleTerms).forEach((term) => { - if (term.match(escapedWord) && !titleTerms[word]) - arr.push({ files: titleTerms[word], score: Scorer.partialTitle }); - }); + if (!terms.hasOwnProperty(word)) { + Object.keys(terms).forEach((term) => { + if (term.match(escapedWord)) + arr.push({ files: terms[term], score: Scorer.partialTerm }); + }); + } + if (!titleTerms.hasOwnProperty(word)) { + Object.keys(titleTerms).forEach((term) => { + if (term.match(escapedWord)) + arr.push({ files: titleTerms[term], score: Scorer.partialTitle }); + }); + } } // no match but word was a required one @@ -496,9 +542,8 @@ const Search = { // create the mapping files.forEach((file) => { - if (fileMap.has(file) && fileMap.get(file).indexOf(word) === -1) - fileMap.get(file).push(word); - else fileMap.set(file, [word]); + if (!fileMap.has(file)) fileMap.set(file, [word]); + else if (fileMap.get(file).indexOf(word) === -1) fileMap.get(file).push(word); }); }); @@ -549,8 +594,8 @@ const Search = { * search summary for a given text. keywords is a list * of stemmed words. */ - makeSearchSummary: (htmlText, keywords) => { - const text = Search.htmlToText(htmlText); + makeSearchSummary: (htmlText, keywords, anchor) => { + const text = Search.htmlToText(htmlText, anchor); if (text === "") return null; const textLower = text.toLowerCase(); diff --git a/stable/api.html b/stable/api.html index 6510aaf49..51e1de4df 100644 --- a/stable/api.html +++ b/stable/api.html @@ -14,7 +14,7 @@ - + diff --git a/stable/authors.html b/stable/authors.html index 9799144a9..a98ab22a3 100644 --- a/stable/authors.html +++ b/stable/authors.html @@ -14,7 +14,7 @@ - + diff --git a/stable/building_docs.html b/stable/building_docs.html index aa59d970f..4ba842025 100644 --- a/stable/building_docs.html +++ b/stable/building_docs.html @@ -14,7 +14,7 @@ - + diff --git a/stable/cime.html b/stable/cime.html index eea743a2c..1451ad659 100644 --- a/stable/cime.html +++ b/stable/cime.html @@ -14,7 +14,7 @@ - + diff --git a/stable/config.html b/stable/config.html index 83e463f9c..b27c2007e 100644 --- a/stable/config.html +++ b/stable/config.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.cime.constants.html b/stable/generated/mpas_tools.cime.constants.html index 8afeee4d5..cd1d299b1 100644 --- a/stable/generated/mpas_tools.cime.constants.html +++ b/stable/generated/mpas_tools.cime.constants.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.__getitem__.html b/stable/generated/mpas_tools.config.MpasConfigParser.__getitem__.html index 8114a2735..bab6da337 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.__getitem__.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.__getitem__.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.add_from_file.html b/stable/generated/mpas_tools.config.MpasConfigParser.add_from_file.html index 3ee8d8ba3..6cc2f5bfb 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.add_from_file.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.add_from_file.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.add_from_package.html b/stable/generated/mpas_tools.config.MpasConfigParser.add_from_package.html index d4919f973..d143f5a38 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.add_from_package.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.add_from_package.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.add_user_config.html b/stable/generated/mpas_tools.config.MpasConfigParser.add_user_config.html index b2255ad5e..1da309d40 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.add_user_config.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.add_user_config.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.append.html b/stable/generated/mpas_tools.config.MpasConfigParser.append.html index 6488e9ca5..b5d125532 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.append.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.append.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.copy.html b/stable/generated/mpas_tools.config.MpasConfigParser.copy.html index 817701ea4..44165700b 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.copy.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.copy.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.get.html b/stable/generated/mpas_tools.config.MpasConfigParser.get.html index 158500ef1..9298bfd87 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.get.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.get.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.getboolean.html b/stable/generated/mpas_tools.config.MpasConfigParser.getboolean.html index 9ad4dbe90..ef518ed71 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.getboolean.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.getboolean.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.getexpression.html b/stable/generated/mpas_tools.config.MpasConfigParser.getexpression.html index 68c064b16..add158011 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.getexpression.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.getexpression.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.getfloat.html b/stable/generated/mpas_tools.config.MpasConfigParser.getfloat.html index d1c30dbe2..2171e5409 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.getfloat.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.getfloat.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.getint.html b/stable/generated/mpas_tools.config.MpasConfigParser.getint.html index a2539381d..c6026336b 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.getint.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.getint.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.getlist.html b/stable/generated/mpas_tools.config.MpasConfigParser.getlist.html index d8267b160..21109020f 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.getlist.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.getlist.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.has_option.html b/stable/generated/mpas_tools.config.MpasConfigParser.has_option.html index 668e0f3ec..dad7b121f 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.has_option.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.has_option.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.has_section.html b/stable/generated/mpas_tools.config.MpasConfigParser.has_section.html index aef9aa2e5..ab280a868 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.has_section.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.has_section.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.html b/stable/generated/mpas_tools.config.MpasConfigParser.html index 832e38d60..b8396fcb9 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.prepend.html b/stable/generated/mpas_tools.config.MpasConfigParser.prepend.html index 4f248c737..d7e7834d3 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.prepend.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.prepend.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.set.html b/stable/generated/mpas_tools.config.MpasConfigParser.set.html index e38b2b015..56349e14f 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.set.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.set.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.config.MpasConfigParser.write.html b/stable/generated/mpas_tools.config.MpasConfigParser.write.html index c882a7eb1..070ea82d4 100644 --- a/stable/generated/mpas_tools.config.MpasConfigParser.write.html +++ b/stable/generated/mpas_tools.config.MpasConfigParser.write.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.io.write_netcdf.html b/stable/generated/mpas_tools.io.write_netcdf.html index bc0248ed8..5a3316371 100644 --- a/stable/generated/mpas_tools.io.write_netcdf.html +++ b/stable/generated/mpas_tools.io.write_netcdf.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.logging.LoggingContext.html b/stable/generated/mpas_tools.logging.LoggingContext.html index f8275a9d5..b65312d27 100644 --- a/stable/generated/mpas_tools.logging.LoggingContext.html +++ b/stable/generated/mpas_tools.logging.LoggingContext.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.logging.check_call.html b/stable/generated/mpas_tools.logging.check_call.html index 5e06c5c0a..565f92995 100644 --- a/stable/generated/mpas_tools.logging.check_call.html +++ b/stable/generated/mpas_tools.logging.check_call.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.merge_grids.merge_grids.html b/stable/generated/mpas_tools.merge_grids.merge_grids.html index d4992f68f..44646a4fc 100644 --- a/stable/generated/mpas_tools.merge_grids.merge_grids.html +++ b/stable/generated/mpas_tools.merge_grids.merge_grids.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.conversion.convert.html b/stable/generated/mpas_tools.mesh.conversion.convert.html index 7dcf83483..dc5be562c 100644 --- a/stable/generated/mpas_tools.mesh.conversion.convert.html +++ b/stable/generated/mpas_tools.mesh.conversion.convert.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.conversion.cull.html b/stable/generated/mpas_tools.mesh.conversion.cull.html index b9b871555..b83c28eb0 100644 --- a/stable/generated/mpas_tools.mesh.conversion.cull.html +++ b/stable/generated/mpas_tools.mesh.conversion.cull.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.conversion.mask.html b/stable/generated/mpas_tools.mesh.conversion.mask.html index da476bed5..e9fbc13af 100644 --- a/stable/generated/mpas_tools.mesh.conversion.mask.html +++ b/stable/generated/mpas_tools.mesh.conversion.mask.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.build_mesh.build_planar_mesh.html b/stable/generated/mpas_tools.mesh.creation.build_mesh.build_planar_mesh.html index d889be260..d63c1fec5 100644 --- a/stable/generated/mpas_tools.mesh.creation.build_mesh.build_planar_mesh.html +++ b/stable/generated/mpas_tools.mesh.creation.build_mesh.build_planar_mesh.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.build_mesh.build_spherical_mesh.html b/stable/generated/mpas_tools.mesh.creation.build_mesh.build_spherical_mesh.html index 45de6e567..33e5d1f6b 100644 --- a/stable/generated/mpas_tools.mesh.creation.build_mesh.build_spherical_mesh.html +++ b/stable/generated/mpas_tools.mesh.creation.build_mesh.build_spherical_mesh.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.build_mesh.html b/stable/generated/mpas_tools.mesh.creation.build_mesh.html index 81e715f5a..c3ae72777 100644 --- a/stable/generated/mpas_tools.mesh.creation.build_mesh.html +++ b/stable/generated/mpas_tools.mesh.creation.build_mesh.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.jigsaw_driver.jigsaw_driver.html b/stable/generated/mpas_tools.mesh.creation.jigsaw_driver.jigsaw_driver.html index 7c31419fd..7bba8e6cf 100644 --- a/stable/generated/mpas_tools.mesh.creation.jigsaw_driver.jigsaw_driver.html +++ b/stable/generated/mpas_tools.mesh.creation.jigsaw_driver.jigsaw_driver.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.jigsaw_to_netcdf.jigsaw_to_netcdf.html b/stable/generated/mpas_tools.mesh.creation.jigsaw_to_netcdf.jigsaw_to_netcdf.html index b8041b93f..cb48befa9 100644 --- a/stable/generated/mpas_tools.mesh.creation.jigsaw_to_netcdf.jigsaw_to_netcdf.html +++ b/stable/generated/mpas_tools.mesh.creation.jigsaw_to_netcdf.jigsaw_to_netcdf.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.AtlanticPacificGrid.html b/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.AtlanticPacificGrid.html index 31f563707..6fa9ecce4 100644 --- a/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.AtlanticPacificGrid.html +++ b/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.AtlanticPacificGrid.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.EC_CellWidthVsLat.html b/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.EC_CellWidthVsLat.html index 22921c8c0..3971eda6c 100644 --- a/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.EC_CellWidthVsLat.html +++ b/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.EC_CellWidthVsLat.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.RRS_CellWidthVsLat.html b/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.RRS_CellWidthVsLat.html index af30d34a6..487731f69 100644 --- a/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.RRS_CellWidthVsLat.html +++ b/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.RRS_CellWidthVsLat.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.html b/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.html index a167b52a5..ddfcad272 100644 --- a/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.html +++ b/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.mergeCellWidthVsLat.html b/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.mergeCellWidthVsLat.html index 3848a8706..bf2993b86 100644 --- a/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.mergeCellWidthVsLat.html +++ b/stable/generated/mpas_tools.mesh.creation.mesh_definition_tools.mergeCellWidthVsLat.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.mpas_to_triangle.mpas_to_triangle.html b/stable/generated/mpas_tools.mesh.creation.mpas_to_triangle.mpas_to_triangle.html index 8cac784a4..8006b15cc 100644 --- a/stable/generated/mpas_tools.mesh.creation.mpas_to_triangle.mpas_to_triangle.html +++ b/stable/generated/mpas_tools.mesh.creation.mpas_to_triangle.mpas_to_triangle.html @@ -14,7 +14,7 @@ - + @@ -168,7 +168,7 @@

mpas_tools.mesh.creation.mpas_to_triangle.mpas_to_trianglestr) – The path to an MPAS mesh in NetCDF format

  • trifile (str) – The prefix for the Triangle output files. Files with extensions .node and .ele will be produced.

    • -

  • meshes. (Only works for planar) –

    • +

  • meshes. (Only works for planar)

    • diff --git a/stable/generated/mpas_tools.mesh.creation.signed_distance.distance_from_geojson.html b/stable/generated/mpas_tools.mesh.creation.signed_distance.distance_from_geojson.html index c30257169..a04b4aee1 100644 --- a/stable/generated/mpas_tools.mesh.creation.signed_distance.distance_from_geojson.html +++ b/stable/generated/mpas_tools.mesh.creation.signed_distance.distance_from_geojson.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.signed_distance.html b/stable/generated/mpas_tools.mesh.creation.signed_distance.html index 6acd7bf37..9060163d6 100644 --- a/stable/generated/mpas_tools.mesh.creation.signed_distance.html +++ b/stable/generated/mpas_tools.mesh.creation.signed_distance.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.signed_distance.mask_from_geojson.html b/stable/generated/mpas_tools.mesh.creation.signed_distance.mask_from_geojson.html index bc52bd6d3..e759b4f34 100644 --- a/stable/generated/mpas_tools.mesh.creation.signed_distance.mask_from_geojson.html +++ b/stable/generated/mpas_tools.mesh.creation.signed_distance.mask_from_geojson.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.signed_distance.signed_distance_from_geojson.html b/stable/generated/mpas_tools.mesh.creation.signed_distance.signed_distance_from_geojson.html index baff3ee8f..72633c584 100644 --- a/stable/generated/mpas_tools.mesh.creation.signed_distance.signed_distance_from_geojson.html +++ b/stable/generated/mpas_tools.mesh.creation.signed_distance.signed_distance_from_geojson.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.creation.triangle_to_netcdf.triangle_to_netcdf.html b/stable/generated/mpas_tools.mesh.creation.triangle_to_netcdf.triangle_to_netcdf.html index 7ec92bc54..9ff38d3b1 100644 --- a/stable/generated/mpas_tools.mesh.creation.triangle_to_netcdf.triangle_to_netcdf.html +++ b/stable/generated/mpas_tools.mesh.creation.triangle_to_netcdf.triangle_to_netcdf.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.cull.cull_dataset.html b/stable/generated/mpas_tools.mesh.cull.cull_dataset.html index eeb21645f..147f10f85 100644 --- a/stable/generated/mpas_tools.mesh.cull.cull_dataset.html +++ b/stable/generated/mpas_tools.mesh.cull.cull_dataset.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.cull.map_culled_to_base.html b/stable/generated/mpas_tools.mesh.cull.map_culled_to_base.html index f84f3e2e0..55496d616 100644 --- a/stable/generated/mpas_tools.mesh.cull.map_culled_to_base.html +++ b/stable/generated/mpas_tools.mesh.cull.map_culled_to_base.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.cull.write_culled_dataset.html b/stable/generated/mpas_tools.mesh.cull.write_culled_dataset.html index fd4739060..624acc49c 100644 --- a/stable/generated/mpas_tools.mesh.cull.write_culled_dataset.html +++ b/stable/generated/mpas_tools.mesh.cull.write_culled_dataset.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.cull.write_map_culled_to_base.html b/stable/generated/mpas_tools.mesh.cull.write_map_culled_to_base.html index 6f97a8ebd..c574b3631 100644 --- a/stable/generated/mpas_tools.mesh.cull.write_map_culled_to_base.html +++ b/stable/generated/mpas_tools.mesh.cull.write_map_culled_to_base.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.interpolation.interp_bilin.html b/stable/generated/mpas_tools.mesh.interpolation.interp_bilin.html index 09f9aa636..19ab0bc44 100644 --- a/stable/generated/mpas_tools.mesh.interpolation.interp_bilin.html +++ b/stable/generated/mpas_tools.mesh.interpolation.interp_bilin.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.mask.compute_lon_lat_region_masks.html b/stable/generated/mpas_tools.mesh.mask.compute_lon_lat_region_masks.html index 2c899cb69..76198a52f 100644 --- a/stable/generated/mpas_tools.mesh.mask.compute_lon_lat_region_masks.html +++ b/stable/generated/mpas_tools.mesh.mask.compute_lon_lat_region_masks.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.mask.compute_mpas_flood_fill_mask.html b/stable/generated/mpas_tools.mesh.mask.compute_mpas_flood_fill_mask.html index df62c9e12..b0700e3b5 100644 --- a/stable/generated/mpas_tools.mesh.mask.compute_mpas_flood_fill_mask.html +++ b/stable/generated/mpas_tools.mesh.mask.compute_mpas_flood_fill_mask.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.mask.compute_mpas_region_masks.html b/stable/generated/mpas_tools.mesh.mask.compute_mpas_region_masks.html index 6232aa709..58677c9af 100644 --- a/stable/generated/mpas_tools.mesh.mask.compute_mpas_region_masks.html +++ b/stable/generated/mpas_tools.mesh.mask.compute_mpas_region_masks.html @@ -14,7 +14,7 @@ - + diff --git a/stable/generated/mpas_tools.mesh.mask.compute_mpas_transect_masks.html 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103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 149], "A": [6, 22, 24, 25, 26, 28, 29, 30, 32, 33, 34, 35, 43, 44, 45, 46, 47, 48, 49, 50, 52, 53, 54, 55, 57, 58, 61, 62, 63, 64, 65, 75, 81, 88, 89, 90, 92, 93, 94, 95, 97, 100, 101, 102, 103, 104, 108, 110, 117, 118, 119, 120, 126, 128, 130, 131, 132, 133, 134, 137, 139, 140, 141, 144, 145, 146, 149, 156], "meta": [6, 138], "combin": [6, 37, 40, 131, 139, 140, 156], "when": [6, 15, 22, 90, 110, 130, 131, 132, 133, 138, 139, 141], "custom": [6, 146], "proven": [6, 22, 145], "differ": [6, 24, 90, 106, 139, 140, 141, 149, 150, 156], "take": [6, 10, 11, 21, 22, 62, 137, 139, 145, 156], "preced": [6, 10, 11, 21], "even": [6, 98, 142, 156], "later": [6, 90, 139, 144], "variabl": [6, 25, 36, 55, 65, 90, 96, 103, 108, 120, 130, 131, 135, 136, 139, 140, 141, 146, 154, 156], "none": [6, 15, 22, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 43, 45, 47, 49, 52, 53, 54, 55, 57, 58, 61, 62, 63, 64, 65, 77, 78, 81, 88, 89, 90, 95, 96, 97, 98, 104, 106, 109, 110, 131, 137, 139, 141, 156], "combined_com": 6, "dict": [6, 15, 24, 26, 61, 62, 65], "comment": [6, 22, 23, 135, 138], "each": [6, 15, 23, 34, 43, 45, 48, 50, 52, 54, 55, 79, 80, 81, 90, 93, 96, 106, 110, 115, 116, 130, 131, 132, 133, 139, 141, 143, 144, 145, 149, 154, 156], "__init__": [6, 25, 120, 138], "new": [6, 25, 47, 49, 62, 89, 95, 100, 137, 138, 139, 141, 142, 149, 156], "empti": [6, 131, 138, 141, 143, 156], "paramet": [7, 8, 9, 10, 11, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 57, 58, 61, 62, 63, 64, 65, 74, 75, 76, 77, 78, 79, 80, 81, 83, 84, 85, 88, 89, 90, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 106, 108, 110, 111, 112, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 130, 131, 132, 133, 134, 141], "str": [7, 8, 9, 10, 13, 14, 15, 16, 17, 18, 19, 20, 22, 24, 25, 26, 27, 28, 29, 30, 32, 33, 35, 41, 46, 49, 50, 57, 58, 65, 77, 78, 80, 81, 83, 84, 85, 89, 96, 98, 99, 100, 101, 102, 103, 104, 106, 108, 110, 111, 131, 138], "retriev": 7, "return": [7, 12, 13, 14, 16, 17, 18, 19, 20, 28, 29, 30, 37, 38, 39, 40, 43, 44, 45, 47, 48, 49, 51, 52, 53, 54, 55, 61, 62, 63, 64, 65, 74, 75, 76, 79, 80, 88, 89, 90, 92, 93, 94, 95, 97, 98, 112, 115, 116, 121, 122, 123, 124, 125, 126, 127, 128, 130, 132, 133, 134, 139, 140, 145], "section_proxi": 7, "sectionproxi": 7, "filenam": [8, 10, 24, 100, 108, 131, 139, 146, 149, 156], "file": [8, 9, 10, 15, 22, 23, 24, 25, 27, 28, 29, 30, 32, 33, 35, 41, 46, 49, 50, 57, 58, 62, 63, 64, 65, 77, 78, 81, 83, 84, 85, 89, 98, 99, 100, 101, 102, 103, 104, 106, 108, 110, 131, 135, 137, 138, 139, 140, 141, 143, 144, 145, 146, 149, 152, 154, 156], "rel": [8, 10, 28, 29, 139, 140, 149, 156], "absolut": [8, 10, 28, 29, 149], "config_filenam": 9, "bool": [9, 14, 15, 19, 20, 22, 23, 26, 33, 35, 52, 54, 55, 57, 58, 62, 63, 64, 65, 83, 98, 99, 100, 103, 106, 130, 131, 133], "whether": [9, 19, 20, 22, 23, 26, 33, 34, 35, 52, 54, 55, 57, 58, 62, 63, 64, 65, 83, 96, 99, 100, 103, 106, 130, 131, 133, 139, 141, 144], "isn": [9, 139], "t": [9, 100, 138, 139, 140, 146, 149], "These": [10, 36, 135, 138, 139, 140, 141, 148, 153, 156], "one": [11, 21, 26, 29, 52, 54, 55, 57, 58, 61, 74, 90, 100, 125, 126, 128, 132, 133, 137, 139, 140, 141, 142, 143, 144, 149, 153, 154, 156], "higher": [11, 21, 140, 141], "prioriti": [11, 21, 22, 152], "config_copi": 12, "dtype": [15, 18], "use_numpyfunc": 15, "express": [15, 131, 156], "typic": [15, 28, 29, 106, 110, 131, 132, 133, 137, 138, 139, 140, 141, 142, 145, 149, 153, 156], "though": [15, 156], "avail": [15, 43, 45, 47, 48, 49, 50, 53, 64, 97, 98, 139, 145, 149, 152, 156], "requir": [15, 35, 55, 110, 138, 139, 140, 141, 143, 145, 154, 156], "have": [15, 47, 49, 52, 54, 55, 90, 110, 125, 130, 137, 139, 140, 143, 149, 152, 156], "valid": [15, 28, 90, 104, 138, 139], "syntax": 15, "entri": [15, 37, 38, 39, 40, 105, 107, 135, 141, 152], "singl": [15, 27, 131, 139, 141, 154, 156], "doubl": [15, 139], "quot": 15, "type": [15, 18, 24, 54, 55, 63, 108, 125, 126, 128, 138, 139, 140, 141, 146, 154, 156], "int": [15, 17, 18, 26, 30, 43, 45, 47, 48, 49, 50, 52, 53, 54, 55, 62, 63, 64, 65, 75, 97, 98, 103, 104, 106, 110, 131, 136, 138, 139, 140], "If": [15, 25, 26, 33, 35, 43, 45, 51, 55, 58, 61, 90, 95, 131, 137, 138, 139, 140, 141, 144, 146, 152, 156], "suppli": [15, 22, 25, 98, 131, 137, 139, 141, 154, 156], "element": [15, 18, 46, 47, 48, 49, 50, 125, 126, 128], "cast": 15, "ensur": [15, 95], "rather": [15, 23, 47, 49, 100, 131, 139, 156], "than": [15, 23, 47, 49, 95, 100, 131, 139, 140, 149, 156], "distinct": 15, "import": [15, 136, 137, 139, 140, 141, 142, 145, 152, 156], "evalu": 15, "referenc": 15, "either": [15, 25, 30, 65, 108, 120, 125, 126, 128, 131, 137, 139, 140, 141, 156], "np": [15, 136, 140, 141], "wa": [19, 20, 22, 23, 139, 149], "call": [22, 25, 26, 61, 62, 63, 64, 65, 90, 92, 93, 94, 97, 125, 132, 133, 134, 135, 138, 139, 140, 141, 142, 143, 145, 149, 152, 154, 156], "retain": [22, 141], "through": [22, 141, 149, 153, 156], "command": [22, 24, 26, 27, 110, 138, 139, 140, 145, 146, 152, 154, 156], "flag": [22, 139, 145], "fp": 23, "include_sourc": 23, "include_com": 23, "raw": 23, "pointer": 23, "testio": 23, "indic": [23, 62, 63, 64, 65, 90, 125, 126, 128, 130, 131, 132, 133, 138, 139, 141, 142, 143, 145, 149, 156], "defin": [23, 32, 34, 35, 36, 46, 57, 62, 63, 74, 76, 79, 80, 83, 84, 85, 88, 89, 90, 92, 93, 94, 106, 123, 130, 131, 132, 133, 134, 136, 138, 139, 141, 145, 153, 154, 156], "extend": [23, 100, 135, 156], "interpol": [23, 90, 92, 93, 94, 115, 116, 130, 132, 133, 135, 139, 156], "d": [24, 47, 49, 62, 64, 96, 136, 139, 140, 141, 149, 156], "fillvalu": 24, "format": [24, 35, 41, 46, 65, 98, 135, 137, 141, 145, 156], "engin": [24, 98], "char_dim_nam": 24, "xarrai": [24, 28, 29, 30, 47, 48, 52, 53, 54, 55, 74, 75, 76, 79, 80, 88, 90, 92, 93, 94, 96, 98, 117, 118, 119, 130, 132, 133, 134, 137, 139, 140, 142, 145, 156], "dataset": [24, 28, 29, 30, 47, 48, 49, 50, 52, 53, 54, 55, 57, 58, 65, 74, 75, 76, 88, 90, 92, 93, 94, 96, 98, 117, 118, 119, 130, 132, 133, 134, 135, 136, 140, 141, 145, 156], "netcdf4": [24, 98, 136], "fill": [24, 53, 156], "dimens": [24, 80, 90, 92, 93, 94, 98, 110, 131, 139, 146], "time": [24, 62, 63, 64, 65, 78, 80, 81, 131, 135, 139, 140, 141, 146, 149, 154], "histori": [24, 27, 110, 139], "attribut": [24, 25, 27, 101, 102, 103, 104, 110, 125, 126, 128, 139], "save": [24, 28, 29, 47, 49, 63, 98, 110, 139, 140, 141, 149, 154], "netcdf": [24, 35, 41, 46, 65, 98, 99, 106, 108, 131, 137, 141, 149, 154], "default_fil": 24, "default_fillv": 24, "netcdf4_class": [24, 98], "netcdf3_64bit": [24, 98], "netcdf3_class": [24, 98], "default_format": 24, "scipi": [24, 98, 132, 133, 134, 136], "h5netcdf": [24, 98], "librari": [24, 98, 139, 140], "output": [24, 25, 26, 28, 29, 30, 32, 33, 34, 35, 41, 46, 47, 49, 52, 53, 54, 55, 57, 58, 77, 78, 81, 88, 89, 90, 98, 99, 131, 137, 139, 145, 149, 154, 156], "to_netcdf": 24, "depend": [24, 131, 135, 137, 146, 156], "overrid": 24, "default_engin": 24, "let": 24, "figur": [24, 95, 146, 156], "default_char_dim_nam": 24, "strlen": 24, "logger": [25, 26, 28, 29, 30, 32, 33, 34, 47, 49, 52, 53, 54, 55, 57, 58, 88, 89, 137, 139], "log_filenam": [25, 137], "context": [25, 137, 143], "manag": 25, "creat": [25, 30, 38, 39, 47, 48, 49, 52, 53, 54, 55, 61, 63, 88, 97, 99, 105, 106, 110, 135, 137, 138, 139, 140, 142, 144, 147, 148, 149, 150, 152, 153, 156], "send": 25, "stdout": [25, 28, 29, 30, 32, 33, 34, 52, 53, 54, 55, 57, 58, 88, 89, 137, 139], "stderr": [25, 137, 139], "anyth": 25, "els": 25, "just": [25, 137, 138, 140, 146, 156], "uniqu": [25, 62, 63, 64, 65, 137], "__name__": [25, 137, 140], "goe": 25, "arg": [26, 138], "log_command": 26, "timeout": 26, "kwarg": 26, "subprocess": [26, 135], "pass": [26, 47, 49, 51, 55, 90, 131, 137, 139, 141, 149, 156], "shell": 26, "ot": [26, 140], "keyword": 26, "popen": 26, "calledprocesserror": 26, "nonzero": 26, "statu": 26, "infile1": [27, 139], "infile2": [27, 139], "outfil": [27, 110, 139], "runner": [27, 110], "merg": [27, 29, 110, 135, 142, 145], "two": [27, 37, 40, 76, 110, 132, 133, 139, 140, 142, 144, 156], "non": [27, 98, 110, 139, 140], "contigu": [27, 53, 110, 139], "mesh": [27, 57, 58, 61, 62, 63, 64, 65, 75, 83, 84, 85, 88, 89, 90, 94, 96, 98, 99, 100, 106, 108, 110, 117, 118, 119, 130, 131, 132, 133, 134, 135, 136, 137, 142, 143, 145, 146, 149, 153, 154], "togeth": [27, 29, 64, 110, 131, 135, 139, 156], "global": [27, 38, 39, 40, 110, 139, 141, 145], "dsin": [28, 29], "graphinfofilenam": [28, 29, 139], "dir": [28, 29, 30, 33, 89, 137], "mpasmeshconvert": [28, 139, 140], "input": [28, 29, 36, 51, 62, 77, 78, 81, 139, 141, 145, 149, 154, 156], "fulli": 28, "compliant": 28, "io": [28, 137, 139, 140, 145], "meshspec": 28, "pdf": 28, "data": [28, 29, 35, 44, 46, 53, 57, 58, 67, 75, 80, 90, 92, 93, 94, 98, 130, 131, 132, 133, 139, 140, 141, 143, 144, 145, 146, 153], "info": [28, 29, 137, 139, 149], "By": [28, 29, 131, 138, 141, 142, 156], "log": [28, 29, 30, 32, 33, 34, 47, 49, 52, 53, 54, 55, 57, 58, 88, 89, 131, 135, 139, 140], "directori": [28, 29, 30, 33, 57, 58, 89, 96, 106, 131, 138, 144, 149, 156], "temporari": [28, 29, 30, 33, 89, 131, 149], "produc": [28, 29, 30, 33, 41, 58, 89, 90, 96, 139, 140, 142, 144, 145, 156], "delet": [28, 29, 30, 33, 89], "upon": [28, 29, 30, 33, 89], "complet": [28, 29, 30, 33, 89, 90, 156], "dsout": [28, 29, 132, 133], "dsmask": [29, 30, 52, 53, 54, 55, 74, 75, 76, 88, 139, 145], "dsinvers": 29, "dspreserv": 29, "mpascellcul": [29, 106, 139, 140, 149], "cell": [29, 32, 33, 34, 37, 38, 39, 40, 48, 50, 51, 52, 53, 54, 55, 57, 58, 61, 62, 63, 75, 76, 84, 85, 90, 92, 93, 97, 98, 103, 104, 110, 130, 131, 132, 133, 135, 136, 138, 145, 146, 148, 149, 153, 154, 156], "base": [29, 47, 48, 49, 50, 54, 55, 61, 80, 90, 97, 125, 126, 128, 138, 139, 140, 141, 142, 156], "cullcel": [29, 139], "field": [29, 43, 45, 47, 49, 51, 61, 62, 63, 83, 84, 85, 90, 92, 93, 94, 99, 100, 106, 108, 118, 131, 132, 133, 139, 141, 144, 146, 148, 149, 150, 154], "mask": [29, 44, 74, 75, 76, 80, 88, 89, 97, 99, 104, 131, 135, 140, 145, 153, 156], "final": [29, 132, 133, 139, 141, 156], "union": 29, "preserv": [29, 57, 58, 139, 144], "determin": [29, 61, 62, 108, 123, 126, 128, 139, 145, 149, 153], "possibli": [29, 80, 92, 93, 139], "remov": [29, 98, 106, 135, 139, 142, 156], "region": [29, 30, 38, 43, 44, 45, 52, 54, 61, 62, 65, 74, 75, 76, 88, 89, 95, 106, 135, 140, 142, 144, 145, 147, 149], "1": [29, 30, 43, 44, 45, 47, 48, 49, 50, 53, 64, 65, 80, 95, 115, 116, 131, 132, 133, 136, 137, 139, 140, 141, 155, 156], "0": [29, 34, 38, 44, 52, 54, 55, 57, 58, 64, 65, 75, 76, 91, 95, 100, 108, 119, 131, 132, 133, 138, 139, 140, 141, 142, 155, 156], "culled_graph": 29, "dsmesh": [30, 53, 54, 55, 75, 76, 88, 130, 132, 133, 139, 140, 145, 156], "fcmask": [30, 52, 54, 55, 139, 142, 145], "core": [30, 139], "compute_mpas_region_mask": [30, 139, 142], "collect": [30, 52, 53, 54, 55, 89, 95, 131, 139, 142, 145, 156], "geometric_featur": [30, 52, 53, 54, 55, 89, 95, 96, 131, 139, 140, 142, 145, 146, 156], "featurecollect": [30, 43, 44, 45, 52, 53, 54, 55, 89, 95, 96, 131, 139, 140, 145, 146, 156], "creation": [30, 62, 63, 64, 65, 97, 135, 137], "multiprocess": [30, 52, 54, 55, 97, 135], "cellwidth": [32, 33, 34, 36, 57, 58, 83, 84, 85, 136, 137, 140], "y": [32, 34, 51, 57, 72, 84, 98, 112, 113, 114, 115, 116, 119, 120, 125, 126, 128, 132, 137, 139, 140, 149, 152, 154], "geom_point": [32, 34, 57, 137, 140], "geom_edg": [32, 34, 57, 137, 140], "out_filenam": [32, 33, 49, 50, 57, 58, 137, 139, 140, 154], "base_mesh": [32, 33, 57, 58, 136, 137, 139, 140, 142], "nc": [32, 33, 57, 58, 106, 110, 131, 136, 137, 139, 140, 141, 142, 144, 145, 149, 154, 156], "planar": [32, 34, 35, 41, 57, 83, 84, 98, 116, 117, 118, 119, 132, 135, 139, 144, 153], "ndarrai": [32, 33, 34, 37, 38, 39, 40, 43, 44, 45, 51, 52, 57, 58, 61, 62, 63, 64, 65, 79, 84, 85, 103, 104, 112, 115, 116, 120, 121, 123, 124, 126, 127, 128, 140, 154], "width": [32, 33, 37, 38, 39, 40, 57, 58, 61, 62, 63, 84, 85, 95, 135, 136], "km": [32, 33, 37, 38, 39, 57, 58, 84, 85, 100, 139, 140, 141, 149, 156], "coordin": [32, 34, 51, 57, 77, 78, 79, 80, 81, 83, 84, 90, 112, 115, 116, 117, 118, 119, 125, 126, 128, 130, 131, 132, 133, 135, 139, 140, 141, 146, 153], "meter": [32, 33, 34, 35, 43, 45, 55, 57, 58, 61, 62, 63, 64, 84, 98, 139, 140, 141], "point": [32, 34, 43, 45, 53, 57, 62, 64, 65, 90, 95, 105, 107, 112, 115, 116, 121, 125, 126, 128, 131, 132, 133, 135, 139, 140, 141, 152, 153, 156], "bound": [32, 34, 51, 57, 63, 65, 79, 90, 139, 140, 141, 156], "polygon": [32, 34, 52, 54, 57, 95, 131, 139, 140, 156], "edg": [32, 34, 48, 50, 52, 54, 55, 57, 104, 110, 131, 132, 133, 134, 139, 140, 145, 153, 154, 156], "result": [32, 33, 34, 57, 58, 62, 63, 64, 65, 90, 92, 93, 94, 101, 102, 103, 104, 108, 131, 132, 133, 134, 139, 140, 141, 145, 149, 156], "lon": [33, 34, 36, 37, 43, 44, 45, 52, 54, 58, 60, 62, 63, 64, 65, 67, 68, 71, 85, 90, 95, 113, 114, 130, 131, 133, 136, 137, 140, 141], "lat": [33, 34, 36, 37, 38, 39, 40, 43, 44, 45, 52, 54, 58, 60, 62, 63, 64, 65, 67, 68, 71, 85, 90, 95, 113, 114, 130, 131, 133, 136, 137, 140, 141], "earth_radiu": [33, 34, 43, 45, 112, 113, 114, 136, 137, 140], "plot_cellwidth": [33, 58, 137], "jigsaw": [33, 34, 35, 36, 58, 135, 137], "size": [33, 34, 51, 53, 58, 120, 125, 126, 128, 131, 139, 140, 146, 156], "latitud": [33, 38, 43, 44, 45, 51, 52, 54, 55, 58, 61, 62, 63, 64, 65, 75, 76, 95, 103, 104, 133, 136, 139, 140, 141, 142, 148, 153], "longitud": [33, 43, 44, 45, 51, 52, 54, 55, 58, 61, 62, 63, 64, 65, 85, 103, 104, 130, 133, 136, 139, 140, 141, 148, 153, 156], "store": [33, 58, 131, 139], "sever": [33, 58, 140, 141, 142, 148, 149, 156], "intermedi": 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"Coastal Tools": [[141, "coastal-tools"]], "Refining a Mesh": [[141, "refining-a-mesh"]], "Creating a Background Mesh": [[141, "creating-a-background-mesh"]], "Extracting Coastlines": [[141, "extracting-coastlines"]], "Computing Distance to Coast": [[141, "computing-distance-to-coast"]], "Blending Cell Widths": [[141, "blending-cell-widths"]], "Regions": [[141, "regions"]], "Coastline Alteration": [[142, "coastline-alteration"]], "Adding Land Blockages": [[142, "adding-land-blockages"]], "Masking Land-locked Cells": [[142, "masking-land-locked-cells"]], "Widening Transects": [[142, "widening-transects"]], "Adding a Depth Coordinate": [[143, "adding-a-depth-coordinate"]], "Adding a 1D depth coordinate": [[143, "adding-a-1d-depth-coordinate"]], "Adding a 3D zMid coordinate": [[143, "adding-a-3d-zmid-coordinate"]], "Writing a time-dependent, 3D zMid variable": [[143, "writing-a-time-dependent-3d-zmid-variable"]], "Ocean Mesh Creation": [[144, "ocean-mesh-creation"]], "Meridional Overturning Circulation": [[145, "meridional-overturning-circulation"]], "Building MOC Basins": [[145, "building-moc-basins"]], "Adding Southern Transects": [[145, "adding-southern-transects"]], "Building MOC Basins and Transects Together": [[145, "building-moc-basins-and-transects-together"]], "Plotting Ocean Transects": [[146, "plotting-ocean-transects"]], "Mask": [[147, "mask"]], "Extending a Mask": [[147, "extending-a-mask"]], "Mesh": [[148, "mesh"]], "MPAS-Seaice SCRIP files": [[148, "mpas-seaice-scrip-files"]], "SCRIP files for 2D grids": [[148, "scrip-files-for-2d-grids"]], "Graph partitioning": [[149, "graph-partitioning"]], "Running from compass": [[149, "running-from-compass"]], "Conda environment": [[149, "conda-environment"]], "Graph partition tools": [[149, "graph-partition-tools"]], "Graph partition function": [[149, "graph-partition-function"]], "Region masks": [[150, "region-masks"]], "Make a region mask for partitioning": [[150, "make-a-region-mask-for-partitioning"]], "Regrid": [[151, "regrid"]], "Regridding between MPAS-Seaice meshes": [[151, "regridding-between-mpas-seaice-meshes"]], "Testing Changes to mpas_tools": [[152, "testing-changes-to-mpas-tools"]], "Removing the test environment": [[152, "removing-the-test-environment"]], "Subdividing transects": [[153, "subdividing-transects"]], "Low-level functions": [[153, "low-level-functions"]], "Vector Operations": [[154, "vector-operations"]], "Vector Class": [[154, "vector-class"]], "Vector Reconstructions": [[154, "vector-reconstructions"]], "ParaView VTK Extractor": [[156, "paraview-vtk-extractor"]], "Extracting a Temperature Time-series": [[156, "extracting-a-temperature-time-series"]], "Extracting Multiple Fields": [[156, "extracting-multiple-fields"]], "Extracting \u201cAll\u201d Fields": [[156, "extracting-all-fields"]], "Indexing Dimensions": [[156, "indexing-dimensions"]], "Indexing Time": [[156, "indexing-time"]], "Ignoring Time": [[156, "ignoring-time"]], "Lon/Lat Coordinates": [[156, "lon-lat-coordinates"]], "Topographic Data": [[156, "topographic-data"]], "Extracting a Region": [[156, "extracting-a-region"]], "ParaView Macros": [[156, "paraview-macros"]], "MPAS Mesh to Triangles": [[156, "mpas-mesh-to-triangles"]], "Colormaps": [[156, "colormaps"]]}, "indexentries": {"module": [[5, "module-mpas_tools.cime.constants"], [31, "module-mpas_tools.mesh.creation.build_mesh"], [36, "module-mpas_tools.mesh.creation.mesh_definition_tools"], [42, "module-mpas_tools.mesh.creation.signed_distance"], [56, "module-mpas_tools.ocean.build_mesh"], [59, "module-mpas_tools.ocean.coastal_tools"], [73, "module-mpas_tools.ocean.coastline_alteration"], [87, "module-mpas_tools.ocean.moc"]], "mpas_tools.cime.constants": [[5, "module-mpas_tools.cime.constants"]], "mpasconfigparser (class in mpas_tools.config)": [[6, "mpas_tools.config.MpasConfigParser"]], "__init__() (mpas_tools.config.mpasconfigparser method)": [[6, "mpas_tools.config.MpasConfigParser.__init__"]], "__getitem__() (mpas_tools.config.mpasconfigparser method)": [[7, "mpas_tools.config.MpasConfigParser.__getitem__"]], "add_from_file() (mpas_tools.config.mpasconfigparser method)": [[8, "mpas_tools.config.MpasConfigParser.add_from_file"]], "add_from_package() (mpas_tools.config.mpasconfigparser method)": [[9, "mpas_tools.config.MpasConfigParser.add_from_package"]], "add_user_config() (mpas_tools.config.mpasconfigparser method)": [[10, "mpas_tools.config.MpasConfigParser.add_user_config"]], "append() (mpas_tools.config.mpasconfigparser method)": [[11, "mpas_tools.config.MpasConfigParser.append"]], "copy() (mpas_tools.config.mpasconfigparser method)": [[12, "mpas_tools.config.MpasConfigParser.copy"]], "get() (mpas_tools.config.mpasconfigparser method)": [[13, "mpas_tools.config.MpasConfigParser.get"]], "getboolean() (mpas_tools.config.mpasconfigparser method)": [[14, "mpas_tools.config.MpasConfigParser.getboolean"]], "getexpression() (mpas_tools.config.mpasconfigparser method)": [[15, "mpas_tools.config.MpasConfigParser.getexpression"]], "getfloat() (mpas_tools.config.mpasconfigparser method)": [[16, "mpas_tools.config.MpasConfigParser.getfloat"]], "getint() (mpas_tools.config.mpasconfigparser method)": [[17, "mpas_tools.config.MpasConfigParser.getint"]], "getlist() (mpas_tools.config.mpasconfigparser method)": [[18, "mpas_tools.config.MpasConfigParser.getlist"]], "has_option() (mpas_tools.config.mpasconfigparser method)": [[19, "mpas_tools.config.MpasConfigParser.has_option"]], "has_section() (mpas_tools.config.mpasconfigparser method)": [[20, "mpas_tools.config.MpasConfigParser.has_section"]], "prepend() (mpas_tools.config.mpasconfigparser method)": [[21, "mpas_tools.config.MpasConfigParser.prepend"]], "set() (mpas_tools.config.mpasconfigparser method)": [[22, "mpas_tools.config.MpasConfigParser.set"]], "write() (mpas_tools.config.mpasconfigparser method)": [[23, "mpas_tools.config.MpasConfigParser.write"]], "write_netcdf() (in module mpas_tools.io)": [[24, "mpas_tools.io.write_netcdf"]], "loggingcontext (class in mpas_tools.logging)": [[25, "mpas_tools.logging.LoggingContext"]], "__init__() (mpas_tools.logging.loggingcontext method)": [[25, "mpas_tools.logging.LoggingContext.__init__"]], "check_call() (in module mpas_tools.logging)": [[26, "mpas_tools.logging.check_call"]], "merge_grids() (in module mpas_tools.merge_grids)": [[27, "mpas_tools.merge_grids.merge_grids"]], "convert() (in module mpas_tools.mesh.conversion)": [[28, "mpas_tools.mesh.conversion.convert"]], "cull() (in module mpas_tools.mesh.conversion)": [[29, "mpas_tools.mesh.conversion.cull"]], "mask() (in module mpas_tools.mesh.conversion)": [[30, "mpas_tools.mesh.conversion.mask"]], "mpas_tools.mesh.creation.build_mesh": [[31, "module-mpas_tools.mesh.creation.build_mesh"]], "build_planar_mesh() (in module mpas_tools.mesh.creation.build_mesh)": [[32, "mpas_tools.mesh.creation.build_mesh.build_planar_mesh"]], "build_spherical_mesh() (in module mpas_tools.mesh.creation.build_mesh)": [[33, "mpas_tools.mesh.creation.build_mesh.build_spherical_mesh"]], "jigsaw_driver() (in module mpas_tools.mesh.creation.jigsaw_driver)": [[34, "mpas_tools.mesh.creation.jigsaw_driver.jigsaw_driver"]], "jigsaw_to_netcdf() (in module mpas_tools.mesh.creation.jigsaw_to_netcdf)": [[35, "mpas_tools.mesh.creation.jigsaw_to_netcdf.jigsaw_to_netcdf"]], "mpas_tools.mesh.creation.mesh_definition_tools": [[36, "module-mpas_tools.mesh.creation.mesh_definition_tools"]], "atlanticpacificgrid() (in module mpas_tools.mesh.creation.mesh_definition_tools)": [[37, "mpas_tools.mesh.creation.mesh_definition_tools.AtlanticPacificGrid"]], "ec_cellwidthvslat() (in module mpas_tools.mesh.creation.mesh_definition_tools)": [[38, "mpas_tools.mesh.creation.mesh_definition_tools.EC_CellWidthVsLat"]], "rrs_cellwidthvslat() (in module mpas_tools.mesh.creation.mesh_definition_tools)": [[39, "mpas_tools.mesh.creation.mesh_definition_tools.RRS_CellWidthVsLat"]], "mergecellwidthvslat() (in module mpas_tools.mesh.creation.mesh_definition_tools)": [[40, "mpas_tools.mesh.creation.mesh_definition_tools.mergeCellWidthVsLat"]], "mpas_to_triangle() (in module mpas_tools.mesh.creation.mpas_to_triangle)": [[41, "mpas_tools.mesh.creation.mpas_to_triangle.mpas_to_triangle"]], "mpas_tools.mesh.creation.signed_distance": [[42, "module-mpas_tools.mesh.creation.signed_distance"]], "distance_from_geojson() (in module mpas_tools.mesh.creation.signed_distance)": [[43, "mpas_tools.mesh.creation.signed_distance.distance_from_geojson"]], "mask_from_geojson() (in module mpas_tools.mesh.creation.signed_distance)": [[44, "mpas_tools.mesh.creation.signed_distance.mask_from_geojson"]], "signed_distance_from_geojson() (in module mpas_tools.mesh.creation.signed_distance)": [[45, "mpas_tools.mesh.creation.signed_distance.signed_distance_from_geojson"]], "triangle_to_netcdf() (in module mpas_tools.mesh.creation.triangle_to_netcdf)": [[46, "mpas_tools.mesh.creation.triangle_to_netcdf.triangle_to_netcdf"]], "cull_dataset() (in module mpas_tools.mesh.cull)": [[47, "mpas_tools.mesh.cull.cull_dataset"]], "map_culled_to_base() (in module mpas_tools.mesh.cull)": [[48, "mpas_tools.mesh.cull.map_culled_to_base"]], "write_culled_dataset() (in module mpas_tools.mesh.cull)": [[49, "mpas_tools.mesh.cull.write_culled_dataset"]], "write_map_culled_to_base() (in module mpas_tools.mesh.cull)": [[50, "mpas_tools.mesh.cull.write_map_culled_to_base"]], "interp_bilin() (in module mpas_tools.mesh.interpolation)": [[51, "mpas_tools.mesh.interpolation.interp_bilin"]], "compute_lon_lat_region_masks() (in module mpas_tools.mesh.mask)": [[52, "mpas_tools.mesh.mask.compute_lon_lat_region_masks"]], "compute_mpas_flood_fill_mask() (in module mpas_tools.mesh.mask)": [[53, "mpas_tools.mesh.mask.compute_mpas_flood_fill_mask"]], "compute_mpas_region_masks() (in module mpas_tools.mesh.mask)": [[54, "mpas_tools.mesh.mask.compute_mpas_region_masks"]], "compute_mpas_transect_masks() (in module mpas_tools.mesh.mask)": [[55, "mpas_tools.mesh.mask.compute_mpas_transect_masks"]], "mpas_tools.ocean.build_mesh": [[56, "module-mpas_tools.ocean.build_mesh"]], "build_planar_mesh() (in module mpas_tools.ocean.build_mesh)": [[57, "mpas_tools.ocean.build_mesh.build_planar_mesh"]], "build_spherical_mesh() (in module mpas_tools.ocean.build_mesh)": [[58, "mpas_tools.ocean.build_mesh.build_spherical_mesh"]], "mpas_tools.ocean.coastal_tools": [[59, "module-mpas_tools.ocean.coastal_tools"]], "cpp_projection() (in module mpas_tools.ocean.coastal_tools)": [[60, "mpas_tools.ocean.coastal_tools.CPP_projection"]], "coastal_refined_mesh() (in module mpas_tools.ocean.coastal_tools)": [[61, "mpas_tools.ocean.coastal_tools.coastal_refined_mesh"]], "compute_cell_width() (in module mpas_tools.ocean.coastal_tools)": [[62, "mpas_tools.ocean.coastal_tools.compute_cell_width"]], "create_background_mesh() (in module mpas_tools.ocean.coastal_tools)": [[63, "mpas_tools.ocean.coastal_tools.create_background_mesh"]], "distance_to_coast() (in module mpas_tools.ocean.coastal_tools)": [[64, "mpas_tools.ocean.coastal_tools.distance_to_coast"]], "extract_coastlines() (in module mpas_tools.ocean.coastal_tools)": [[65, "mpas_tools.ocean.coastal_tools.extract_coastlines"]], "get_convex_hull_coordinates() (in module mpas_tools.ocean.coastal_tools)": [[66, "mpas_tools.ocean.coastal_tools.get_convex_hull_coordinates"]], "get_data_inside_box() (in module mpas_tools.ocean.coastal_tools)": [[67, "mpas_tools.ocean.coastal_tools.get_data_inside_box"]], "get_indices_inside_quad() (in module mpas_tools.ocean.coastal_tools)": [[68, "mpas_tools.ocean.coastal_tools.get_indices_inside_quad"]], "plot_coarse_coast() (in module mpas_tools.ocean.coastal_tools)": [[69, "mpas_tools.ocean.coastal_tools.plot_coarse_coast"]], "plot_region_box() (in module mpas_tools.ocean.coastal_tools)": [[70, "mpas_tools.ocean.coastal_tools.plot_region_box"]], "save_matfile() (in module mpas_tools.ocean.coastal_tools)": [[71, "mpas_tools.ocean.coastal_tools.save_matfile"]], "smooth_coastline() (in module mpas_tools.ocean.coastal_tools)": [[72, "mpas_tools.ocean.coastal_tools.smooth_coastline"]], "mpas_tools.ocean.coastline_alteration": [[73, "module-mpas_tools.ocean.coastline_alteration"]], "add_critical_land_blockages() (in module mpas_tools.ocean.coastline_alteration)": [[74, "mpas_tools.ocean.coastline_alteration.add_critical_land_blockages"]], "add_land_locked_cells_to_mask() (in module mpas_tools.ocean.coastline_alteration)": [[75, "mpas_tools.ocean.coastline_alteration.add_land_locked_cells_to_mask"]], "widen_transect_edge_masks() (in module mpas_tools.ocean.coastline_alteration)": [[76, "mpas_tools.ocean.coastline_alteration.widen_transect_edge_masks"]], "add_depth() (in module mpas_tools.ocean.depth)": [[77, "mpas_tools.ocean.depth.add_depth"]], "add_zmid() (in module mpas_tools.ocean.depth)": [[78, "mpas_tools.ocean.depth.add_zmid"]], "compute_depth() (in module mpas_tools.ocean.depth)": [[79, "mpas_tools.ocean.depth.compute_depth"]], "compute_zmid() (in module mpas_tools.ocean.depth)": [[80, "mpas_tools.ocean.depth.compute_zmid"]], "write_time_varying_zmid() (in module mpas_tools.ocean.depth)": [[81, "mpas_tools.ocean.depth.write_time_varying_zmid"]], "inject_bathymetry() (in module mpas_tools.ocean.inject_bathymetry)": [[82, "mpas_tools.ocean.inject_bathymetry.inject_bathymetry"]], "inject_meshdensity_from_file() (in module mpas_tools.ocean.inject_meshdensity)": [[83, "mpas_tools.ocean.inject_meshDensity.inject_meshDensity_from_file"]], "inject_planar_meshdensity() (in module mpas_tools.ocean.inject_meshdensity)": [[84, "mpas_tools.ocean.inject_meshDensity.inject_planar_meshDensity"]], "inject_spherical_meshdensity() (in module mpas_tools.ocean.inject_meshdensity)": [[85, "mpas_tools.ocean.inject_meshDensity.inject_spherical_meshDensity"]], "inject_preserve_floodplain() (in module mpas_tools.ocean.inject_preserve_floodplain)": 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"interp_transect_grid_to_transect_triangle_nodes() (in module mpas_tools.ocean.transects)": [[94, "mpas_tools.ocean.transects.interp_transect_grid_to_transect_triangle_nodes"]], "add_inset() (in module mpas_tools.ocean.viz)": [[95, "mpas_tools.ocean.viz.add_inset"]], "plot_ocean_transects() (in module mpas_tools.ocean.viz)": [[96, "mpas_tools.ocean.viz.plot_ocean_transects"]], "create_pool() (in module mpas_tools.parallel)": [[97, "mpas_tools.parallel.create_pool"]], "make_planar_hex_mesh() (in module mpas_tools.planar_hex)": [[98, "mpas_tools.planar_hex.make_planar_hex_mesh"]], "scrip_from_mpas() (in module mpas_tools.scrip.from_mpas)": [[99, "mpas_tools.scrip.from_mpas.scrip_from_mpas"]], "extend_seaice_mask() (in module mpas_tools.seaice.mask)": [[100, "mpas_tools.seaice.mask.extend_seaice_mask"]], "make_mpas_scripfile_on_cells() (in module mpas_tools.seaice.mesh)": [[101, "mpas_tools.seaice.mesh.make_mpas_scripfile_on_cells"]], "make_mpas_scripfile_on_vertices() (in module mpas_tools.seaice.mesh)": [[102, "mpas_tools.seaice.mesh.make_mpas_scripfile_on_vertices"]], "write_2d_scripfile() (in module mpas_tools.seaice.mesh)": [[103, "mpas_tools.seaice.mesh.write_2D_scripfile"]], "write_scrip_file() (in module mpas_tools.seaice.mesh)": [[104, "mpas_tools.seaice.mesh.write_scrip_file"]], "create_partitions() (in module mpas_tools.seaice.partition)": [[105, "mpas_tools.seaice.partition.create_partitions"]], "gen_seaice_mesh_partition() (in module mpas_tools.seaice.partition)": [[106, "mpas_tools.seaice.partition.gen_seaice_mesh_partition"]], "prepare_partitions() (in module mpas_tools.seaice.partition)": [[107, "mpas_tools.seaice.partition.prepare_partitions"]], "make_regions_file() (in module mpas_tools.seaice.regions)": [[108, "mpas_tools.seaice.regions.make_regions_file"]], "regrid_to_other_mesh() (in module mpas_tools.seaice.regrid)": [[109, "mpas_tools.seaice.regrid.regrid_to_other_mesh"]], "split_grids() (in module mpas_tools.split_grids)": [[110, "mpas_tools.split_grids.split_grids"]], "test_cime_constants() (in module mpas_tools.tests.test_cime_constants)": [[111, "mpas_tools.tests.test_cime_constants.test_cime_constants"]], "cartesian_to_great_circle_distance() (in module mpas_tools.transects)": [[112, "mpas_tools.transects.cartesian_to_great_circle_distance"]], "cartesian_to_lon_lat() (in module mpas_tools.transects)": [[113, "mpas_tools.transects.cartesian_to_lon_lat"]], "lon_lat_to_cartesian() (in module mpas_tools.transects)": [[114, "mpas_tools.transects.lon_lat_to_cartesian"]], "subdivide_great_circle() (in module mpas_tools.transects)": [[115, "mpas_tools.transects.subdivide_great_circle"]], "subdivide_planar() (in module mpas_tools.transects)": [[116, "mpas_tools.transects.subdivide_planar"]], "center() (in module mpas_tools.translate)": [[117, "mpas_tools.translate.center"]], "center_on_mesh() (in module mpas_tools.translate)": [[118, "mpas_tools.translate.center_on_mesh"]], "translate() (in module 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"mpas_tools.vector.Vector.straddles"]], "register_sci_viz_colormaps() (in module mpas_tools.viz.colormaps)": [[129, "mpas_tools.viz.colormaps.register_sci_viz_colormaps"]], "mesh_to_triangles() (in module mpas_tools.viz.mesh_to_triangles)": [[130, "mpas_tools.viz.mesh_to_triangles.mesh_to_triangles"]], "extract_vtk() (in module mpas_tools.viz.paraview_extractor)": [[131, "mpas_tools.viz.paraview_extractor.extract_vtk"]], "find_planar_transect_cells_and_weights() (in module mpas_tools.viz.transects)": [[132, "mpas_tools.viz.transects.find_planar_transect_cells_and_weights"]], "find_transect_cells_and_weights() (in module mpas_tools.viz.transects)": [[133, "mpas_tools.viz.transects.find_transect_cells_and_weights"]], "make_triangle_tree() (in module mpas_tools.viz.transects)": [[134, "mpas_tools.viz.transects.make_triangle_tree"]]}}) \ No newline at end of file +Search.setIndex({"alltitles": {"API reference": [[0, "api-reference"]], "Adding Land Blockages": [[142, "adding-land-blockages"]], "Adding Southern Transects": [[145, "adding-southern-transects"]], "Adding a 1D depth coordinate": [[143, "adding-a-1d-depth-coordinate"]], "Adding a 3D zMid coordinate": [[143, "adding-a-3d-zmid-coordinate"]], "Adding a Depth Coordinate": [[143, "adding-a-depth-coordinate"]], "Authors": [[135, null]], "Blending Cell Widths": [[141, "blending-cell-widths"]], "Building MOC Basins": [[145, "building-moc-basins"]], "Building MOC Basins and Transects Together": [[145, "building-moc-basins-and-transects-together"]], "Building a JIGSAW Mesh": [[140, "building-a-jigsaw-mesh"]], "Building the Documentation": [[2, "building-the-documentation"]], "CIME Constants": [[3, "cime-constants"]], "CIME constants": [[0, "cime-constants"]], "Cell Culler": [[139, "cell-culler"]], "Coastal Tools": [[141, "coastal-tools"]], "Coastline Alteration": [[142, "coastline-alteration"]], "Colormaps": [[156, "colormaps"]], "Comments in config files": [[4, "comments-in-config-files"]], "Computing Distance to Coast": [[141, "computing-distance-to-coast"]], "Computing Lon/Lat Region Masks": [[139, "computing-lon-lat-region-masks"]], "Computing MPAS Region Masks": [[139, "computing-mpas-region-masks"]], "Computing Transect Masks": [[139, "computing-transect-masks"]], "Computing a Flood-fill Mask": [[139, "computing-a-flood-fill-mask"]], "Conda environment": [[149, "conda-environment"]], "Config": [[0, "config"]], "Config files": [[4, "config-files"]], "Contributors": [[1, "contributors"]], "Converting Between Mesh Formats": [[139, "converting-between-mesh-formats"]], "Creating a Background Mesh": [[141, "creating-a-background-mesh"]], "Culling MPAS Datasets": [[139, "culling-mpas-datasets"]], "Defining a Rossby-radius Mesh": [[140, "defining-a-rossby-radius-mesh"]], "Defining an Atlantic/Pacific Mesh": [[140, "defining-an-atlantic-pacific-mesh"]], "Defining an Eddy-closure Mesh": [[140, "defining-an-eddy-closure-mesh"]], "Dependencies": [[138, "dependencies"]], "Developer's Guide": [[135, null]], "Entry Points": [[138, "entry-points"]], "Extending a Mask": [[147, "extending-a-mask"]], "Extracting Coastlines": [[141, "extracting-coastlines"]], "Extracting Multiple Fields": [[156, "extracting-multiple-fields"]], "Extracting a Region": [[156, "extracting-a-region"]], "Extracting a Temperature Time-series": [[156, "extracting-a-temperature-time-series"]], "Extracting \u201cAll\u201d Fields": [[156, "extracting-all-fields"]], "Graph partition function": [[149, "graph-partition-function"]], "Graph partition tools": [[149, "graph-partition-tools"]], "Graph partitioning": [[149, "graph-partitioning"]], "I/O": [[0, "i-o"]], "Ignoring Time": [[156, "ignoring-time"]], "Indexing Dimensions": [[156, "indexing-dimensions"]], "Indexing Time": [[156, "indexing-time"]], "Indices and tables": [[135, "indices-and-tables"]], "Interpolation": [[0, "interpolation"], [136, "interpolation"]], "JIGSAW Driver": [[140, "jigsaw-driver"]], "Logging": [[0, "logging"], [137, "logging"]], "Logging subprocess calls": [[137, "logging-subprocess-calls"]], "Lon/Lat Coordinates": [[156, "lon-lat-coordinates"]], "Low-level functions": [[153, "low-level-functions"]], "MPAS Mesh to Triangles": [[156, "mpas-mesh-to-triangles"]], "MPAS NetCDF to SCRIP": [[139, "mpas-netcdf-to-scrip"]], "MPAS NetCDF to Triangle": [[139, "mpas-netcdf-to-triangle"]], "MPAS mesh tools": [[0, "mpas-mesh-tools"]], "MPAS-Seaice SCRIP files": [[148, "mpas-seaice-scrip-files"]], "MPAS-Tools": [[135, "mpas-tools"]], "MSH to MPAS NetCDF": [[139, "msh-to-mpas-netcdf"]], "Main Authors": [[1, "main-authors"]], "Make a region mask for partitioning": [[150, "make-a-region-mask-for-partitioning"]], "Making Changes to mpas_tools": [[138, "making-changes-to-mpas-tools"]], "Mask": [[147, "mask"]], "Mask Creation with Python Multiprocessing": [[139, "mask-creation-with-python-multiprocessing"]], "Mask Creator": [[139, "mask-creator"]], "Masking Land-locked Cells": [[142, "masking-land-locked-cells"]], "Merging Cell Widths": [[140, "merging-cell-widths"]], "Merging and Splitting": [[139, "merging-and-splitting"]], "Meridional Overturning Circulation": [[145, "meridional-overturning-circulation"]], "Mesh": [[148, "mesh"]], "Mesh Conversion": [[139, "mesh-conversion"]], "Mesh Converter": [[139, "mesh-converter"]], "Mesh Creation": [[140, "id1"]], "Mesh Definition Tools": [[140, "mesh-definition-tools"]], "Mesh conversion": [[0, "mesh-conversion"]], "Mesh creation": [[0, "mesh-creation"]], "Ocean Mesh Creation": [[144, "ocean-mesh-creation"]], "Ocean Tools": [[0, "ocean-tools"], [135, null]], "ParaView Macros": [[156, "paraview-macros"]], "ParaView VTK Extractor": [[156, "paraview-vtk-extractor"]], "Parallelism": [[0, "parallelism"]], "Planar Meshes": [[140, "planar-meshes"]], "Plotting Ocean Transects": [[146, "plotting-ocean-transects"]], "Refining a Mesh": [[141, "refining-a-mesh"]], "Region masks": [[150, "region-masks"]], "Regions": [[141, "regions"]], "Regrid": [[151, "regrid"]], "Regridding between MPAS-Seaice meshes": [[151, "regridding-between-mpas-seaice-meshes"]], "Removing the test environment": [[152, "removing-the-test-environment"]], "Running from compass": [[149, "running-from-compass"]], "SCRIP files for 2D grids": [[148, "scrip-files-for-2d-grids"]], "Sea-ice Tools": [[0, "sea-ice-tools"], [135, null]], "Signed Distance Functions": [[140, "signed-distance-functions"]], "Spherical Meshes": [[140, "spherical-meshes"]], "Subdividing transects": [[153, "subdividing-transects"]], "Testing Changes to mpas_tools": [[152, "testing-changes-to-mpas-tools"]], "Tests": [[0, "tests"]], "Topographic Data": [[156, "topographic-data"]], "Transects": [[0, "transects"], [153, "transects"]], "Translation": [[139, "translation"]], "Triangle to MPAS NetCDF": [[139, "triangle-to-mpas-netcdf"]], "Uniform, Planar Meshes": [[140, "uniform-planar-meshes"]], "Updating the Version": [[138, "updating-the-version"]], "User's Guide": 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b/stable/testing_changes.html @@ -14,7 +14,7 @@ - + diff --git a/stable/transects.html b/stable/transects.html index 6ff7aa632..9dac9b430 100644 --- a/stable/transects.html +++ b/stable/transects.html @@ -14,7 +14,7 @@ - + diff --git a/stable/vector.html b/stable/vector.html index b9e821d24..7b2199db8 100644 --- a/stable/vector.html +++ b/stable/vector.html @@ -14,7 +14,7 @@ - + diff --git a/stable/versions.html b/stable/versions.html index d6ac8ceef..0b2e760de 100644 --- a/stable/versions.html +++ b/stable/versions.html @@ -14,7 +14,7 @@ - + diff --git a/stable/visualization.html b/stable/visualization.html index 17af7dce3..57fcb3585 100644 --- a/stable/visualization.html +++ b/stable/visualization.html @@ -14,7 +14,7 @@ - +