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DESCRIPTION
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DESCRIPTION
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Package: GwasDataImport
Title: Import EBI Data to OpenGWAS
Version: 0.2
Authors@R: c(
person("Gibran", "Hemani", , "g.hemani@bristol.ac.uk", role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-0920-1055")),
person("Philip", "Haycock", , "philip.haycock@bristol.ac.uk", role = "aut",
comment = c(ORCID = "0000-0001-5001-3350")),
person("Tom", "Palmer", , "tom.palmer@bristol.ac.uk", role = "aut",
comment = c(ORCID = "0000-0003-4655-4511"))
)
URL: https://mrcieu.github.io/GwasDataImport
Description: Determine the new EBI data not present in OpenGWAS. Download
dataset and import metadata. Upload processed data and metadata to
OpenGWAS.
License: MIT + file LICENSE
Depends:
R (>= 3.6.0)
Imports:
biomaRt,
data.table,
dplyr,
GenomeInfoDb,
GenomicRanges,
glue,
httr,
ieugwasr,
IRanges,
jsonlite,
magrittr,
R6,
rtracklayer,
tidyr
Suggests:
covr,
knitr,
R.utils,
rmarkdown,
CheckSumStats,
gwasvcf,
SummarizedExperiment,
testthat
VignetteBuilder:
knitr
Remotes:
github::MRCIEU/CheckSumStats,
github::MRCIEU/gwasvcf,
github::mrcieu/ieugwasr
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3