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Improve performance of reading many files #18

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stemangiola opened this issue Dec 18, 2024 · 0 comments

stemangiola commented Dec 18, 2024

This part

experiment_list <- raw_data |>
            dplyr::group_by(.data[[grouping_column]]) |>
            dplyr::summarise(experiments = list(
                group_to_data_container(
                    dplyr::cur_group_id(),
                    dplyr::cur_data_all(),
                    dir_prefix,
                    features,
                    grouping_column
                )
            ))

takes long time. Not sure if we can use zellkonverter parameters to speed this up, or using the R native package (now available)

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