Failed to make some plots

[lacy111693]

Hello! I am brand new to this tool and was having issues with CheckM but have gotten those resolved. I ran dereplicate with the -d flag just took keep and eye out for anymore errors. It looks like the process finished okay but in step 5, analyze, I got these errors with the plots. Any thoughts?

making plots 1, 2, 3, 4, 5, 6
Plotting primary dendrogram
Plotting secondary dendrograms
Plotting MDS plot
Plotting scatterplots
Plotting bin scorring plot
Failed to make plot #5: list index out of range
Traceback (most recent call last):
File "/Users/lacy_barrett/.conda/envs/drep/lib/python3.9/site-packages/drep/d_analyze.py", line 108, in d_analyze_wrapper
plot_binscoring_from_wd(wd, plot_dir, **kwargs)
File "/Users/lacy_barrett/.conda/envs/drep/lib/python3.9/site-packages/drep/d_analyze.py", line 369, in plot_binscoring_from_wd
plot_winner_scoring_complex(Wdb, Sdb, Cdb, Gdb, plot_dir = plot_dir, **kwargs)
File "/Users/lacy_barrett/.conda/envs/drep/lib/python3.9/site-packages/drep/d_analyze.py", line 734, in plot_winner_scoring_complex
g.annotate("{0:.1f}".format(vals[i]), (p.get_width(), p.get_y()+(p.get_height()/1.1) ), fontsize=8)
IndexError: list index out of range
Plotting winning genomes plot...
Failed to make plot #6: list index out of range
Traceback (most recent call last):
File "/Users/lacy_barrett/.conda/envs/drep/lib/python3.9/site-packages/drep/d_analyze.py", line 117, in d_analyze_wrapper
plot_winners_from_wd(wd, plot_dir, **kwargs)
File "/Users/lacy_barrett/.conda/envs/drep/lib/python3.9/site-packages/drep/d_analyze.py", line 403, in plot_winners_from_wd
plot_winners(Wdb, Gdb, Wndb, Wmdb, Widb, plot_dir = plot_dir, **kwargs)
File "/Users/lacy_barrett/.conda/envs/drep/lib/python3.9/site-packages/drep/d_analyze.py", line 840, in plot_winners
_make_scoring_plot(d,bars,**kwargs)
File "/Users/lacy_barrett/.conda/envs/drep/lib/python3.9/site-packages/drep/d_analyze.py", line 1384, in _make_scoring_plot
g.annotate("{0:.1f}".format(vals[i]), (p.get_width(), p.get_y()+(p.get_height()/1.1) ), fontsize=8)
IndexError: list index out of range

[MrOlm]

Hi @lacy111693 - the plotting library changes often, so there errors are somewhat common. They do NOT impact anything other than the figures drawn at the end, and those 2 figures aren't very useful imo anyways.

If you'd like to get those figures made I can help troubleshoot, though if I were you I would just proceed without them

Best,
Matt