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Question regarding some output errors for bigscape and bigslice.
I am running a bgc analysis of a small group of custom genbank genome files with the following rules:
All of the workflows function fine except for bigscape and bigslice. I have attached a snippet from the snakemake log file as well as the log file from the ./logs/bigscape/bgc_genomes_antismash_7.1.0/ log folder. I also attached the snakemake log file of the report build.
Any help on a resolution for these errors would be greatly appreciated and let me know if you need more information. Thanks!
The text was updated successfully, but these errors were encountered:
alpole23
changed the title
"Error in rule bigslice" and _"Macro Syntax Error"_ for bigscape output report
"Error in rule bigslice" and "Macro Syntax Error" for bigscape output report
Feb 20, 2025
Hi Devs,
Question regarding some output errors for bigscape and bigslice.
I am running a bgc analysis of a small group of custom genbank genome files with the following rules:
All of the workflows function fine except for bigscape and bigslice. I have attached a snippet from the snakemake log file as well as the log file from the
./logs/bigscape/bgc_genomes_antismash_7.1.0/
log folder. I also attached the snakemake log file of the report build.bigscape.log
snakemake_log_bigscape_snippet.txt
snakemake_report_build_log.txt
After building the reports and serving them up, there is a "Macro Syntax Error" for the bigscape tab shown in the screen capture below.
Aside from the bigscape error, I also encountered an unrelated error with bigslice. Logs are below.
snakemake_log_bigslice_snippet.txt
Any help on a resolution for these errors would be greatly appreciated and let me know if you need more information. Thanks!
The text was updated successfully, but these errors were encountered: