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lectures/nextflow/nextflow.qmd
@@ -108,30 +108,6 @@ process GET_SRA_BY_ACCESSION {
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}
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```
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-## Anatomy of a process {auto-animate=true}
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-
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-```groovy
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-process GET_SRA_BY_ACCESSION {
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- cpus 2
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- memory '8 GB'
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- conda 'sra-tools=2.11.0'
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- container 'ncbi/sra-tools:2.11.0'
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- input:
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- val(sample)
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- output:
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- tuple val(sample), path("${sample}.fastq.gz")
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- script:
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- """
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- fastq-dump ${sample} -X {params.depth} > ${sample}.fastq.gz
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-}
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-```
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## Anatomy of a workflow {auto-animate=true}
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```groovy
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