Threads via variable. #361
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added 2 commits
November 25, 2024 16:22
Rules `merge_gtc_to_bcf_batches` and `convert_bcf_to_plink_bed` adopt the use of `workflow.cores` instead of hardcoded 44.
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Nov 25, 2024
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ACK - will test. |
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max_threadsparameter tocores(925d5c6).workflow.coresto define threads in rulesconvert_bcf_to_plink_bedandmerge_gtc_to_bcf_batchesinstead of hardcoded 44 (acc7df7).The
max_threadsseems inaccessible at the rule level. Thecoresdoes the trick. They both seem synonymous anyway per the Snakemake documentation.Please let me know if you encounter any issues. Thanks.