Long-term stability

[slarge]

Model stabilizes for the last 20 years of unfished/unperturbed (criteria 2)

[RMORSEcode]

Currently running 100 year simulation, 75 % complete @ 9:30 AM (18 hrs elapsed) -> 16:00 today

[RMORSEcode]

100 year simulation results posted here:
https://drive.google.com/drive/folders/18xBU19edge2Xv6wDRUkzVBIW7LKXEieq?usp=sharing

#run command:
atlantisMerged -i RMinit4_2019.nc 0 -o atneus_v15_test2008hydro_20180208.nc -r at_run_neus_v15_RM_scale_0503.prm -f at_force_neus_v15_DE_LINUX_RM_newHydro_highnuts.prm -p at_physics_nuts_neus_v15_DE_eddys.prm -b at_biol_neus_v15_scaled_diet_20190710a_lt.prm -h at_harvest_neus_v15_working.prm -e at_economics_neus_DE_New.prm -s NeusGroups_v15_unix_RM.csv -q NeusFisheries_v15.csv -t /home/ryan/Git/atneus_RM -d 20191001a

[sgaichas]

I've brought these results in to the draft stability testing code here (starting at line 161). Using ecodata::geom_gls on the last 20 years of each time series, many significant trends are detected. 14 groups have no significant trend over the last 20 years; the rest do. Until we pull the docs folder from the output_testing branch into master, the best way to see results is to download and view this file in a web browser.

I will be away next week, but please comment on this approach to testing long-term stability.