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NWB and DANDI Workshop

hosted by the Universidad Nacional Autónoma de México (UNAM)

Dates: February 19-20, 2025

Location: Universidad Nacional Autónoma de México, Mexico City, Mexico (Room TBD)

Host: Dr. Luis Lemus

Instructors:

  • Benjamin Dichter, Founder & CEO, CatalystNeuro
  • Ramon Heberto Martinez Mayorquin, Sr. Research Software Engineer, CatalystNeuro

Join us for an interactive workshop on Neurodata Without Borders (NWB), a data standard for neurophysiology, and the DANDI Archive, a collaboration platform for publishing, sharing, and processing neurophysiology data. Learn how to use these resources to maximize the impact of your data while complying with the new NIH data sharing and management policies.

Target Audience

This workshop is designed for neuroscience researchers at all career stages, from undergraduate students working in labs to graduate students, post-doctoral researchers, and principal investigators. No prior programming experience is required.

Agenda (Preliminary - exact times TBD)

Location: Antonio Peña Auditorium, IFC, UNAM

February 19, Day 1: NWB and DANDI Training

Format: In-person + Remote

11:00 AM - 12:00 PM: Open Neurophysiology with NWB and DANDI

Overview session suitable for all attendees, including lab leaders

  • Introduction to NWB and DANDI ecosystems
  • NWB core format fundamentals
  • Available conversion tools
  • NWB extensions system
  • Analysis and visualization toolkit
  • Data reuse capabilities
  • Upcoming NWB community events

12:00 PM - 1:00 PM: Lunch Break

1:00 PM - 3:00 PM: Technical Implementation Session

Detailed session for hands-on implementers

Data Conversion

  • NWB GUIDE walkthrough
  • NeuroConv tutorial
  • PyNWB and MatNWB API usage
  • Creating custom extensions

DANDI Publication

  • Data upload workflow
  • DANDI metadata requirements
  • Neurosift visualization tools
  • DANDI Hub features
  • Dendro integration
  • DANDI API implementation

Data Analysis

  • DANDI dataset discovery
  • NWB file handling
  • Analysis workflow examples
  • Visualization techniques
  • Reproducibility best practices

February 20, Day 2: NWB and DANDI Hacking

Format: In-person Only

Hands-on Workshop with Your Data

  • One-on-one assistance with:
    • Data conversion to NWB
    • Custom extension development
    • DANDI data publication
    • Data management optimization

Prerequisites

  • No prior programming experience is required
  • For Day 2, participants should bring their own neurophysiology data they wish to convert to NWB format

Registration

Registration is required for both in-person and remote attendance. Please fill out the registration form here.

Questions?

For any questions about the workshop, please contact Luis Lemus.